NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 2209111009

2209111009: Saline water concentrator pond microbial communities from Bras del Port saltern, Spain - SS19



Overview

Basic Information
IMG/M Taxon OID2209111009 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0050867 | Gp0052443 | Ga0011209
Sample NameSaline water concentrator pond microbial communities from Bras del Port saltern, Spain - SS19
Sequencing StatusPermanent Draft
Sequencing CenterGATC-Biotech AG, Konstanz, Germany
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size378797312
Sequencing Scaffolds7
Novel Protein Genes8
Associated Families7

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available6
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSaline Water Concentrator Pond Microbial Communities From Bras Del Port Saltern, Santa Pola, Spain
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Saline Water Concentrator Pond → Saline Water Concentrator Pond Microbial Communities From Bras Del Port Saltern, Santa Pola, Spain

Alternative Ecosystem Assignments
Environment Ontology (ENVO)aquatic biome → saline evaporation pond → saline water
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Hypersaline (saline)

Location Information
LocationSpain: Bras del Port
CoordinatesLat. (o)38.11Long. (o)-0.36Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F003268Metagenome / Metatranscriptome496Y
F008719Metagenome / Metatranscriptome329Y
F040720Metagenome161Y
F046392Metagenome / Metatranscriptome151Y
F056035Metagenome / Metatranscriptome138Y
F075075Metagenome / Metatranscriptome119Y
F097996Metagenome104N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
2216424719Not Available531Open in IMG/M
2216591371Not Available522Open in IMG/M
2216706084Not Available518Open in IMG/M
2217009406Not Available552Open in IMG/M
2217229512Not Available547Open in IMG/M
2217303962Not Available539Open in IMG/M
2217370303All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage534Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
22164247192216320643F040720MKIYQLQTAKEFYNQVKGNHTTEELMQMYERHVATSFAAECANEALGNKMEVSNSLHSKIESMYNSIEW
22165913712216545921F075075MATIKDGMHPRYLGWQVDWPVFVKMPFSADGHAWKRQEHFNWAERGIDQKQVATLYATGHIYHNYELEKQNKVGDRLGELNSEQLK
22165913712216545922F008719NIPGANNLGVTVESFSDDALKRQQVAEHIQVKMAYDMKITGADLGGFINNVIS
22167060842216696870F097996NSLIFIMEKYYGYYQRWYASRYLGFQRAEPVFVKIPFVSDGKNWKKSEHFNWAERDIEEQDAASLYATGHIYHNTELAKANKVGDRLGELNKEQLYRLVVQLNGIVKDKTTTTQEFNDKRCKQSKIEDKQRGLIRRFLNRNPWIVEDFYQLRDHILGND
22170094062217062681F003268MSASIPNNLPGLEKLVRRIAQAEKSNQKDVRLTIQEARELSNELAILTANLGKTVGEIHAILKEIRDNTTNIDVKFDGGGF
22172295122217176065F056035MWRLIKTKMSLLYKSKEEQTTTCEIKQEGGKIVLDFYSDCGKFGTDEMLDGYKLTPERLLQILQDRDDYSEDELYP
22173039622217281481F097996FVKIPFNADGREWNRQEHFNWAERGIDEEVAATLYATGKIYHNTALEKQNKVGDRLGELNSEQLKRLVVQLNDIVKRRTTTTKEFQDKRCKQSKLEDKQRGLVRRFLNRNQWILEDFYEIRDFILAED
22173703032217374163F046392MVEINLEKAKKKWTPLLENMGVNDNERHDWMSEYAEYHSVNENA
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