Sample 2084038018

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 2084038018

2084038018: Ant host-associated microbial communities from Gamboa, Panama - Trachymyrmex fungus garden

Overview

Basic Information
IMG/M Taxon OID	2084038018 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063180 \| Gp0051997 \| Ga0026366
Sample Name	Ant host-associated microbial communities from Gamboa, Panama - Trachymyrmex fungus garden
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	79020976
Sequencing Scaffolds	1
Novel Protein Genes	1
Associated Families	1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Ant Host-Associated Microbial Communities From Gamboa, Panama
Type	Host-Associated
Taxonomy	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Ant Host-Associated → Ant Host-Associated Microbial Communities From Gamboa, Panama

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Fungus → Fungus corpus

Location Information
Location	Panama: Gamboa
Coordinates	Lat. (^o)	9.1167	Long. (^o)	-79.7	Alt. (m)	N/A	Depth (m)	.2
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000950	Metagenome	822	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
TrFG_contig00421	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	5655	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
TrFG_contig00421	TrFG_01435160	F000950	MLEDIDDQDSPPEDVKINSASIEEIPDPIPPSGKGKGIPKLDFPLGL

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