NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 2046860002

2046860002: Drinking water microbial communities from Ohio, US, that has been chlorinated or chloraminated - sample 11519, Newbler assembly



Overview

Basic Information
IMG/M Taxon OID2046860002 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0046152 | Gp0051672 | Ga0010975
Sample NameDrinking water microbial communities from Ohio, US, that has been chlorinated or chloraminated - sample 11519, Newbler assembly
Sequencing StatusPermanent Draft
Sequencing Center454 Life Sciences
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size105733596
Sequencing Scaffolds1
Novel Protein Genes1
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameDrinking Water Microbial Communities From Ohio, Us, That Has Been Chlorinated Or Chloraminated
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water → Drinking Water Microbial Communities From Ohio, Us, That Has Been Chlorinated Or Chloraminated

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationOhio, USA
CoordinatesLat. (o)39.8Long. (o)-84.3Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F053842Metagenome140Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
TEUFLG033109_F3MK0ZM02FPAXHNot Available523Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
TEUFLG033109_F3MK0ZM02FPAXHTEUFLG033109_3129010F053842MDKLTDLMAKRKWIKCCLRANVAQPEGVKLYGTIRVAKIYSNVLNVKDKEPELYDAIQTVAPEWWGDETQCTLNKDLVCKRHRDHANKEHSWILWLGDFTGDVSRVS

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