| Basic Information | |
|---|---|
| IMG/M Taxon OID | 2027040001 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0045482 | Gp0051457 | Ga0011133 |
| Sample Name | Viral communities in wastewater treatment process (EF-no assembly) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | University of Illinois, Urbana-Champaign |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 183839530 |
| Sequencing Scaffolds | 21 |
| Novel Protein Genes | 21 |
| Associated Families | 13 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 14 |
| All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Tenacibaculum → Tenacibaculum finnmarkense | 2 |
| All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium | 2 |
| All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin012 | 1 |
| All Organisms → cellular organisms → Bacteria | 1 |
| All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Wastewater Viral Communities From Wastewater Treatment Facility In Singapore |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Singapore: Singapore | |||||||
| Coordinates | Lat. (o) | 1.332 | Long. (o) | 103.756 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000388 | Metagenome / Metatranscriptome | 1201 | Y |
| F002371 | Metagenome / Metatranscriptome | 566 | Y |
| F013948 | Metagenome / Metatranscriptome | 267 | Y |
| F023098 | Metagenome / Metatranscriptome | 211 | Y |
| F024534 | Metagenome / Metatranscriptome | 205 | Y |
| F029893 | Metagenome / Metatranscriptome | 187 | Y |
| F033445 | Metagenome / Metatranscriptome | 177 | N |
| F041729 | Metagenome | 159 | Y |
| F043390 | Metagenome / Metatranscriptome | 156 | N |
| F045749 | Metagenome / Metatranscriptome | 152 | Y |
| F051532 | Metagenome / Metatranscriptome | 144 | Y |
| F086646 | Metagenome / Metatranscriptome | 110 | Y |
| F105151 | Metagenome / Metatranscriptome | 100 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| EFn_FTWC1V108E08VU | Not Available | 526 | Open in IMG/M |
| EFn_FTWC1V108EWWHJ | Not Available | 550 | Open in IMG/M |
| EFn_FTWC1V109FL3MO | Not Available | 540 | Open in IMG/M |
| EFn_FTWC1V109FUKD4 | Not Available | 527 | Open in IMG/M |
| EFn_FTWC1V110F9ATH | Not Available | 524 | Open in IMG/M |
| EFn_FTWC1V110F9O4V | Not Available | 550 | Open in IMG/M |
| EFn_FTWC1V111GVOLJ | Not Available | 551 | Open in IMG/M |
| EFn_FTWC1V111GYVUW | Not Available | 516 | Open in IMG/M |
| EFn_FUOFX6F01A4SDA | Not Available | 513 | Open in IMG/M |
| EFn_FUOFX6F01AI5OZ | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Tenacibaculum → Tenacibaculum finnmarkense | 505 | Open in IMG/M |
| EFn_FUOFX6F01AUFYF | Not Available | 512 | Open in IMG/M |
| EFn_FUOFX6F01AWMTR | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium | 500 | Open in IMG/M |
| EFn_FUOFX6F01AYL1G | Not Available | 507 | Open in IMG/M |
| EFn_FUOFX6F01B1HDR | Not Available | 515 | Open in IMG/M |
| EFn_FUOFX6F01B6SI0 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin012 | 506 | Open in IMG/M |
| EFn_FUOFX6F01BMGM2 | All Organisms → cellular organisms → Bacteria | 510 | Open in IMG/M |
| EFn_FUOFX6F01CTXCA | Not Available | 533 | Open in IMG/M |
| EFn_FUOFX6F01DTOJX | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Tenacibaculum → Tenacibaculum finnmarkense | 542 | Open in IMG/M |
| EFn_FUOFX6F01EMYYD | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 524 | Open in IMG/M |
| EFn_FUOFX6F02F3WE4 | Not Available | 517 | Open in IMG/M |
| EFn_FUOFX6F02H95ID | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium | 504 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| EFn_FTWC1V108E08VU | EF_na_2121790 | F024534 | IDRINALPDVFMLASLVQFKYVQTISEPNDVNFVVGLAGGHQVFGEPSQYDKFMDKYLTWLEMRK |
| EFn_FTWC1V108EWWHJ | EF_na_3635710 | F002371 | MKSKKKKETRGGTRQGSGAKPKYNEQTKTVSFRCPLSKVDELKLIAKS |
| EFn_FTWC1V109FL3MO | EF_na_92030 | F033445 | KIKELKDGKRRY*TPRRIALNLLLVSIIWATPLQANDICFTEPDASKIVVELEKGRICEQEVIQYESSVKELSMQIESLKTQVETMSKKFDETMKQLETERKIASEKDKARIEEIKTAGK |
| EFn_FTWC1V109FUKD4 | EF_na_584820 | F105151 | MLSEFITKNFGKDADPRVFLPLLKKVAASYVGNSAMKYVQYCEDMLNINIMDVLNNYDKVKEDLKKYNRDKNSELIQALKEMDLNKLGDKQVANAAQFLKTVGEDELTAYLLFILDNNLDIAKPKIKAFMLEFEQVLRTIKKINKPGSK |
| EFn_FTWC1V110F9ATH | EF_na_1778220 | F002371 | MAVLGVKKETRGGTRQGSGAKPKYNEQTKTVAFRCPLSKVDELKLIVKSKLSEWSVK |
| EFn_FTWC1V110F9O4V | EF_na_1853600 | F000388 | MKVIKVMKEYFQTEDEKVYFFEPLEKEISVEDMQKIVDANEKLVKELKNGKSIRK |
| EFn_FTWC1V111GVOLJ | EF_na_2362310 | F000388 | MRVIKVTREYFETEDEKVYFFEPLEKEISVEDMQKIVDANEKLIKELKE |
| EFn_FTWC1V111GYVUW | EF_na_5313310 | F024534 | MINQQFIDRIDALPDVFMLASLVQFKYIQTISQPNERNFVVGLAGGHQVFGTPEQYELFVDKYLTWLETRKP |
| EFn_FUOFX6F01A4SDA | EF_na_2546480 | F041729 | MKIFNGSVSIIKNTKGEIALKKDIEGKFSAANAAECHAKLMELSKKLKTPINKYSLFVADNGTEPIMLVNRYGNPYIALLPKRGDGNTKRNAVTKLA |
| EFn_FUOFX6F01AI5OZ | EF_na_3340000 | F013948 | MREKFKKIVAYIFRSWEDEPEPTHPRLKILPPFLLELLAYLIGLAILYQIGAYLWSIILTVY |
| EFn_FUOFX6F01AUFYF | EF_na_1334280 | F029893 | QDSVSVAANSVSANVVAGQLYEFVPTGTKVTLSCTGSNTGLRATLIANIPVMNDQAINLQNRFPIIPDDIVFQGAVRACRIVLTARNTTAGALTFFWRIDVN |
| EFn_FUOFX6F01AWMTR | EF_na_1004370 | F043390 | IIGCSTFLAVEMKNGLYGKNEDSQKVITLTLTAEQLEVIDGALEMYCMGLAEQNDPHLKYATNAHEAIYNVLESNFGVEA |
| EFn_FUOFX6F01AYL1G | EF_na_1647970 | F000388 | LKYESHKGTKEYFQTEDEKVYSSSLWKRISVEDMQKIVDANEKLVRS |
| EFn_FUOFX6F01B1HDR | EF_na_230320 | F000388 | MKVIKVTKEYFQTEDEKGFILRAFGKRISVEDMQKIVDANEKLVKEL |
| EFn_FUOFX6F01B6SI0 | EF_na_1018660 | F023098 | MDERRQNWTCEAHHELVASLRDINNKLDGMIERQIAYAETSARIEEKQESIERIVTNGLSHNVANISKRLDIFCDEVKKRLDELEEFQWFRLPITRLRDSIFWYLFKIAAAGGVLYLIIHYGQELVRGTFK |
| EFn_FUOFX6F01BMGM2 | EF_na_4396650 | F024534 | DDNLNKTKNKEDRIKLLPDVFMLASLVQFKYVQTISEPNDVNFVVGLAGGYEVFGTPEQYDKFMDKYLTWLEMRN |
| EFn_FUOFX6F01CTXCA | EF_na_1811070 | F086646 | LDKIKQRSWFLSVDIEDDGAVPCYDTEHELRISHGIAFKSVKILTGKTQETHPYWEALLDMSYLNSTELRDVTFKNLPGESGIYRLNIWFDYRDEELSFGDEFKKLCEFRHKWDDGWVCSKCGVRKADWVEADIKGRNDHE |
| EFn_FUOFX6F01DTOJX | EF_na_514410 | F013948 | MRESFKKIVAYIFRSWEDEPEPTHPRLKILPPFLLELLAYLIGLAILYQIGAYLWSII |
| EFn_FUOFX6F01EMYYD | EF_na_2185740 | F045749 | QGRAPDTESRQQMIQAAISPEQCSVEDLINKHECGVINGRVLDVTWLAKQCEIDGEVLPPTRTLGHILSDMGYQQIENRRVFVKKTNSQHYVWFKPSKKTDSDFAKSEVIDFLKMD |
| EFn_FUOFX6F02F3WE4 | EF_na_1817030 | F051532 | MEVKDKKYEEELAEDIMKILTCYSARYYGARGGRKKKIKVENESVEI |
| EFn_FUOFX6F02H95ID | EF_na_2506690 | F043390 | MKNGLYGKNEDSQKVITLTLTAEQLEVIDGALEMYCMGLAEQNDPHLKYATNAHEAIYNVLESNFGVEA |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |