| Basic Information | |
|---|---|
| Taxon OID | 3300015160 Open in IMG/M |
| Scaffold ID | Ga0167642_1042075 Open in IMG/M |
| Source Dataset Name | Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river)) |
| Source Dataset Category | Metagenome |
| Source Dataset Use Policy | Open |
| Sequencing Center | University of Bristol |
| Sequencing Status | Permanent Draft |
| Scaffold Components | |
|---|---|
| Scaffold Length (bps) | 716 |
| Total Scaffold Genes | 2 (view) |
| Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
| Novel Protein Genes | 2 (view) |
| Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
| Associated Families | 2 |
| Taxonomy | |
|---|---|
| Not Available | (Source: ) |
| Source Dataset Ecosystem |
|---|
| Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil → Metagenomes Of Arctic Soils |
| Source Dataset Sampling Location | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location Name | Russell glacier, Kangerlussuaq, Greenland | |||||||
| Coordinates | Lat. (o) | 67.082186 | Long. (o) | -50.322297 | Alt. (m) | Depth (m) | 0 | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F013541 | Metagenome / Metatranscriptome | 270 | Y |
| F025327 | Metagenome / Metatranscriptome | 202 | Y |
| Protein ID | Family | RBS | Sequence |
|---|---|---|---|
| Ga0167642_10420751 | F025327 | GGAG | MNADEFARAESSGPIMRIDRDLELDFIREFATGGELLMGLGVDGRREKIRVAIYTQKLAHMPFRDGPMTYAEAYAECYGWPLEMRRTVRPEPKSESPLATKSPQKRLFSNG* |
| Ga0167642_10420752 | F013541 | N/A | RTFDSLGENILKSTQLASLACAALLFAGAAAYSADDGKNDAKRETTTHRDFDTVDTHKHGYLTSHDIKSDEYVRKNFAKCNVKHNGHMSREEYSNCHE* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |