Basic Information | |
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Taxon OID | 3300015158 Open in IMG/M |
Scaffold ID | Ga0167622_1000809 Open in IMG/M |
Source Dataset Name | Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Bristol |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 13684 |
Total Scaffold Genes | 16 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 6 (37.50%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil → Metagenomes Of Arctic Soils |
Source Dataset Sampling Location | ||||||||
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Location Name | Russell Glacier, Kangerlussuaq, Greenland | |||||||
Coordinates | Lat. (o) | 67.15650902 | Long. (o) | -50.06398397 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F003710 | Metagenome / Metatranscriptome | 473 | Y |
F081482 | Metagenome / Metatranscriptome | 114 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0167622_10008092 | F081482 | N/A | VEFGGNQAQPGVVESQFGLLNTVQRPQVTMLGREAYATFPDKVAAFLFALLINSPFKGGNRRVALASLFAFCELNNRTVDSRMLDEKAAENLFKRAAGHRELGIPPENVFREIRETMTRAIMPLS* |
Ga0167622_10008094 | F003710 | N/A | MLIKGMTEQEIRVLQEFRRLTVESLGVAAIKAIKHPAGGGEAPAFSLVDKGMLSTDAARENFTLTANAKEFLSYDPKPEFEEAGSAAEEPVVVE* |
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