Basic Information | |
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Taxon OID | 3300010349 Open in IMG/M |
Scaffold ID | Ga0116240_10183119 Open in IMG/M |
Source Dataset Name | AD_HKTAca |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1527 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge → Active Sludge Microbial Communities Of Municipal Wastewater-Treating Anaerobic Digesters From Various Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | Hong Kong | |||||||
Coordinates | Lat. (o) | 22.28 | Long. (o) | 114.17 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F021528 | Metagenome / Metatranscriptome | 218 | N |
F051104 | Metagenome / Metatranscriptome | 144 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0116240_101831191 | F021528 | N/A | LKPLPAGNRATGAFLQLSVPKNYYGSNFYSVGEEGTKAVLSKVEGELKEKGVHTSLIEADMSRVDTFKNIEPEEPFSSYYSLFSLLKARKAIQRGYGTTFLLSNSQQEFCVYDKLEEMRERNMETGGLPPTMRFEHRLLNKQKVKNVYGFGKVEDLFRGGYAVVKEKQVESWKGSLFNFTAEELVVLGSKQLEQEMRRFKERSPSGWFSKFLKAYGAYYLASFAGKEAVIEALKNAEAERTMIWRAVQKFEEAERELMVLKQEEGSKKTLGALYEELRRKVCLN* |
Ga0116240_101831192 | F051104 | AGGAG | MFELRIAEAISEEAELSQKLIREGFLHAFKAGELIEEVKSMLHSEREVESWLESNCSEVELRILQNCMKLYRGETVKVEATLAGEERTTKEKEVE* |
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