Scaffold Ga0130016_10057615

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0130016_10057615

Scaffold Ga0130016_10057615

Overview

Basic Information
Taxon OID	3300009868 Open in IMG/M
Scaffold ID	Ga0130016_10057615 Open in IMG/M
Source Dataset Name	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Beijing Novogene Bioinformatics Technology Co., Ltd
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	3926
Total Scaffold Genes	7 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (57.14%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location
Location Name	Taiwan
Coordinates	Lat. (^o)	25.0	Long. (^o)	121.0	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F037788	Metagenome / Metatranscriptome	167	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0130016_100576156	F037788	GGAG	MKQVKGLGGWVRGAIWLELIIPGYFFGKTFGTADAKYRFLDQFMYPPLFINICGYFRDLPVGHYTARFLGVLAGALIGVLWALLMGVFYKWVLKDWAYSKAARIGSMAFILIALMTGFMSDMFNESIGMELRIDEDAPTELVGKSLVQDYGSFAAGTTITEENAGLLATYGTVRANNEASAHSWWVASLIFMYSWFVLYFICAHRFFKRNLVPRESYFKLQMINLAAIIIYLRMGFGIAPAEYHYIVTRFQYLFGGGM*

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