| Basic Information | |
|---|---|
| Taxon OID | 3300003100 Open in IMG/M |
| Scaffold ID | Ga0052268_103108 Open in IMG/M |
| Source Dataset Name | Food fungal community from Canadian Camembert cheese |
| Source Dataset Category | Metatranscriptome |
| Source Dataset Use Policy | Open |
| Sequencing Center | Laval University |
| Sequencing Status | Permanent Draft |
| Scaffold Components | |
|---|---|
| Scaffold Length (bps) | 990 |
| Total Scaffold Genes | 2 (view) |
| Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
| Novel Protein Genes | 1 (view) |
| Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
| Associated Families | 1 |
| Taxonomy | |
|---|---|
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae | (Source: UniRef50) |
| Source Dataset Ecosystem |
|---|
| Engineered → Food Production → Dairy Products → Unclassified → Unclassified → Food → Food Fungal Community From Canadian Camembert Cheese |
| Source Dataset Sampling Location | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location Name | ||||||||
| Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | Location on Map | |||
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F014579 | Metagenome / Metatranscriptome | 261 | Y |
| Protein ID | Family | RBS | Sequence |
|---|---|---|---|
| Ga0052268_1031082 | F014579 | AGG | MGLEPVDLDGLGIKLESLLLVSQELLDILSLVALQLNHLAHLSVRDDGAIASEFLLDDLENLLLVKLLGKTLNSGQSLATIALLNPYVDVVLRLFSLAGIFVGFGEGVEGLEVFDGHKLGLFVVNGV* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |