| Basic Information | |
|---|---|
| Taxon OID | 3300000115 Open in IMG/M |
| Scaffold ID | DelMOSum2011_c10025581 Open in IMG/M |
| Source Dataset Name | Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011 |
| Source Dataset Category | Metagenome |
| Source Dataset Use Policy | Open |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Sequencing Status | Draft |
| Scaffold Components | |
|---|---|
| Scaffold Length (bps) | 2706 |
| Total Scaffold Genes | 7 (view) |
| Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
| Novel Protein Genes | 2 (view) |
| Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
| Associated Families | 2 |
| Taxonomy | |
|---|---|
| All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
| Source Dataset Ecosystem |
|---|
| Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine → Marine Microbial Communities From Delaware Coast |
| Source Dataset Sampling Location | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location Name | Microbial Observatory off the coast of Delaware, USA | |||||||
| Coordinates | Lat. (o) | 38.848917 | Long. (o) | -75.1076 | Alt. (m) | Depth (m) | 0 | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F024582 | Metagenome / Metatranscriptome | 205 | Y |
| F026537 | Metagenome / Metatranscriptome | 197 | N |
| Protein ID | Family | RBS | Sequence |
|---|---|---|---|
| DelMOSum2011_100255812 | F026537 | N/A | MKKKIINRLEYVEETYAGELETWHDPVTDTYYHVPIEITRRWDESEALINDKANTMTHERKEEHIRNIAFCINDGASGYVTDNFRIEDLPVPQRTGTMTQQDTYSKHKARQIFETFLEQNPNIND* |
| DelMOSum2011_100255816 | F024582 | N/A | MKTTHTTLTHLLGAWDRLEVVGTNPDNYKSILTNTFIDGGTRKIAIEYRIEDGTARSAPYIYAFLVMYDQNGHRRSVIKNGSWGCHGEDMMEFKLWFAKKLSHANEVQELRIEDAQHNITNFLS* |
| ⦗Top⦘ |
 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |