NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F106179

Metagenome / Metatranscriptome Family F106179

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F106179
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 69 residues
Representative Sequence MLRIMVREGRSEDFGSATELLNRVWPYRVGSERGLRHAADAEPPNAHRRYWAAEDDGKLVGWATAAIE
Number of Associated Samples 90
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 57.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 94.00 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.000 % of family members)
Environment Ontology (ENVO) Unclassified
(37.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.92%    β-sheet: 22.92%    Coil/Unstructured: 54.17%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13302Acetyltransf_3 8.00
PF04075F420H2_quin_red 4.00
PF00211Guanylate_cyc 4.00
PF13847Methyltransf_31 2.00
PF01209Ubie_methyltran 2.00
PF01435Peptidase_M48 2.00
PF03992ABM 2.00
PF01872RibD_C 2.00
PF07883Cupin_2 2.00
PF01230HIT 2.00
PF02812ELFV_dehydrog_N 1.00
PF03449GreA_GreB_N 1.00
PF00034Cytochrom_C 1.00
PF12680SnoaL_2 1.00
PF05598DUF772 1.00
PF00892EamA 1.00
PF00535Glycos_transf_2 1.00
PF15567Imm35 1.00
PF01957NfeD 1.00
PF10756bPH_6 1.00
PF00296Bac_luciferase 1.00
PF04828GFA 1.00
PF01965DJ-1_PfpI 1.00
PF07676PD40 1.00
PF12681Glyoxalase_2 1.00
PF13238AAA_18 1.00
PF13442Cytochrome_CBB3 1.00
PF14018DUF4234 1.00
PF01370Epimerase 1.00
PF07366SnoaL 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 4.00
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 2.00
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 2.00
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 2.00
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 2.00
COG0334Glutamate dehydrogenase/leucine dehydrogenaseAmino acid transport and metabolism [E] 1.00
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 1.00
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.00
COG3791Uncharacterized conserved proteinFunction unknown [S] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.00 %
UnclassifiedrootN/A3.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459013|GO6OHWN01D80JWAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300001359|A3035W6_1070214All Organisms → cellular organisms → Bacteria2015Open in IMG/M
3300001532|A20PFW1_1040035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2852Open in IMG/M
3300001538|A10PFW1_10062021All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300002066|JGIcombinedJ21911_10122746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium749Open in IMG/M
3300004081|Ga0063454_101235542All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300004479|Ga0062595_101453863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria629Open in IMG/M
3300005178|Ga0066688_10228673All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300005290|Ga0065712_10754364All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300005332|Ga0066388_101124269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1333Open in IMG/M
3300005337|Ga0070682_100293698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium1190Open in IMG/M
3300005354|Ga0070675_100657189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium953Open in IMG/M
3300005434|Ga0070709_11502457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300005455|Ga0070663_101625797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium576Open in IMG/M
3300005458|Ga0070681_11165618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia692Open in IMG/M
3300005544|Ga0070686_101483944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium571Open in IMG/M
3300005548|Ga0070665_102622352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300005549|Ga0070704_102250034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium507Open in IMG/M
3300005560|Ga0066670_10786037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300005578|Ga0068854_100907893All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium774Open in IMG/M
3300005587|Ga0066654_10131557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1251Open in IMG/M
3300005616|Ga0068852_100336183All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1471Open in IMG/M
3300005840|Ga0068870_10643419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium725Open in IMG/M
3300006028|Ga0070717_11677698Not Available575Open in IMG/M
3300006032|Ga0066696_10775973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia612Open in IMG/M
3300006175|Ga0070712_101461850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium597Open in IMG/M
3300006854|Ga0075425_100548989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1330Open in IMG/M
3300006871|Ga0075434_101172113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium781Open in IMG/M
3300006871|Ga0075434_101320943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium732Open in IMG/M
3300009098|Ga0105245_11982705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium635Open in IMG/M
3300009162|Ga0075423_10383586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1474Open in IMG/M
3300010322|Ga0134084_10214941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium679Open in IMG/M
3300010364|Ga0134066_10381179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia532Open in IMG/M
3300010373|Ga0134128_10476593All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1392Open in IMG/M
3300010373|Ga0134128_12513897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia567Open in IMG/M
3300010375|Ga0105239_13565345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300010397|Ga0134124_11422123Not Available720Open in IMG/M
3300010403|Ga0134123_10516425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1128Open in IMG/M
3300011119|Ga0105246_11006812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium755Open in IMG/M
3300011119|Ga0105246_11250766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia686Open in IMG/M
3300011412|Ga0137424_1031254All Organisms → cellular organisms → Bacteria → Proteobacteria885Open in IMG/M
3300012004|Ga0120134_1102542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium536Open in IMG/M
3300012008|Ga0120174_1028086All Organisms → cellular organisms → Bacteria1716Open in IMG/M
3300012093|Ga0136632_10049901All Organisms → cellular organisms → Bacteria1926Open in IMG/M
3300012198|Ga0137364_10223608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1385Open in IMG/M
3300012198|Ga0137364_11362590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300012208|Ga0137376_10278149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1453Open in IMG/M
3300012951|Ga0164300_10218805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium946Open in IMG/M
3300012955|Ga0164298_10044874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2086Open in IMG/M
3300012984|Ga0164309_10838366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium744Open in IMG/M
3300012985|Ga0164308_10695133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium876Open in IMG/M
3300012986|Ga0164304_10329691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1058Open in IMG/M
3300012986|Ga0164304_10690491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium774Open in IMG/M
3300013296|Ga0157374_11754840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300013306|Ga0163162_10702377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1133Open in IMG/M
3300013306|Ga0163162_13477989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium501Open in IMG/M
3300013308|Ga0157375_10099624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2985Open in IMG/M
3300013308|Ga0157375_11362289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium835Open in IMG/M
3300013308|Ga0157375_12916874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium571Open in IMG/M
3300014058|Ga0120149_1077770All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300014150|Ga0134081_10134512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium802Open in IMG/M
3300014325|Ga0163163_10897208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium950Open in IMG/M
3300014326|Ga0157380_11629300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300014326|Ga0157380_12679910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium565Open in IMG/M
3300014969|Ga0157376_10471599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1228Open in IMG/M
3300015209|Ga0167629_1179967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300015372|Ga0132256_103590993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium521Open in IMG/M
3300015373|Ga0132257_103536059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium568Open in IMG/M
3300015374|Ga0132255_105083580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300018431|Ga0066655_10747684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium663Open in IMG/M
3300020081|Ga0206354_11205617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium818Open in IMG/M
3300020082|Ga0206353_11905198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1573Open in IMG/M
3300025908|Ga0207643_10378916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria892Open in IMG/M
3300025917|Ga0207660_11493573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium546Open in IMG/M
3300025921|Ga0207652_11847175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300025928|Ga0207700_10270255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1459Open in IMG/M
3300025957|Ga0210089_1050787Not Available534Open in IMG/M
3300026035|Ga0207703_12262547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300026088|Ga0207641_12626832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium501Open in IMG/M
3300026116|Ga0207674_10269919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1648Open in IMG/M
3300026116|Ga0207674_11532234All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300026121|Ga0207683_10082148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2862Open in IMG/M
3300026142|Ga0207698_11288071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium745Open in IMG/M
3300026552|Ga0209577_10643311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium615Open in IMG/M
3300027897|Ga0209254_10144370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1955Open in IMG/M
3300028380|Ga0268265_11554262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium666Open in IMG/M
3300028563|Ga0265319_1037757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1645Open in IMG/M
3300028679|Ga0302169_10070495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium825Open in IMG/M
3300028768|Ga0307280_10090012All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1009Open in IMG/M
3300028787|Ga0307323_10380791All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea505Open in IMG/M
3300028828|Ga0307312_10684000All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300028872|Ga0307314_10019085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1552Open in IMG/M
3300028885|Ga0307304_10494956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium560Open in IMG/M
3300030336|Ga0247826_11285093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium589Open in IMG/M
3300031199|Ga0307495_10230634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia523Open in IMG/M
3300031521|Ga0311364_10628669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1082Open in IMG/M
3300031834|Ga0315290_10175497All Organisms → cellular organisms → Bacteria1854Open in IMG/M
3300031902|Ga0302322_103337040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300032401|Ga0315275_10117178All Organisms → cellular organisms → Bacteria2931Open in IMG/M
3300033412|Ga0310810_11042148All Organisms → cellular organisms → Bacteria692Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.00%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.00%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.00%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.00%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459013Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cmEnvironmentalOpen in IMG/M
3300001359Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-35cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001532Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002066Barrow Graham LP Ref core NGADG0002-211 (Barrow Graham LP Ref core NGADG0002-211,NGADG0004-311, ASSEMBLY_DATE=20131004)EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011412Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2EnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012008Permafrost microbial communities from Nunavut, Canada - A39_80cm_12MEnvironmentalOpen in IMG/M
3300012093Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015209Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025957Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028563Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaGHost-AssociatedOpen in IMG/M
3300028679Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N57_024715702170459013Grass SoilMLRMMVREGRSEDFGSANELLNRVWPHRVGSERGLRHADDAAPPNAQRRYWAAEHDGKLVGWATAAIEYQSAERPGFLQVSVAPES
A3035W6_107021413300001359PermafrostMLRIMVREGTREDFGSATELLNRVWPHRVGSERGLRHAADAAPVDARRRCWVAEDDGKLVGWATAAIEYQS
A20PFW1_104003553300001532PermafrostMLRIMVREGTREDFGSATELLNRVWPHRVGSERGLRHAADAAPVDARRRCWVAEDDGKLVGWATAAIEYQSAERPGFLQASV
A10PFW1_1006202113300001538PermafrostMLRIMVREGRSEDFGSATELLNRVWPHRVGSERSLRHAADAEPPNAHRRYWAAEDDGKL
JGIcombinedJ21911_1012274623300002066Arctic Peat SoilMLRSMVREGRREDFGSATELLNRVWPYRVGSARGLRHAADAEPPNAHRRYWAAEDDGKLVGWATAAIEDQSNERPGFLQASVAP
Ga0063454_10123554223300004081SoilMVGIMVREGRSEDFGAATELLNRVWPYRVGSELSLRHACDAEPPDAHRRNWAAEDDGKVVGWATAAIEDQSAE
Ga0062595_10145386323300004479SoilMPVRQRGAERFSSRLMLRIMVREGGSEDFGSATELLNRVWTHRVGSERGLRHAAAAAPREAHRRYWAAEDAGKLV
Ga0066688_1022867323300005178SoilMLRIMVREGRREDFGSATELLNRVWPHRVGSELGLRHAADAEPANAHRRYWAAEDDGKLVGWATAAIE
Ga0065712_1075436423300005290Miscanthus RhizosphereMHTRPPMLRIMVREGGSEDFGSATELLNRVWPYRVGSERGLRHAAAAEPPIAHR
Ga0066388_10112426913300005332Tropical Forest SoilMLRIVVREAVSDDFGQATDLLNRVWPFRVGSKQGLRHAVAGEPPDAHRRHWVAEDAGTLVGWATAKIEYQSSARPGFLQV
Ga0070682_10029369813300005337Corn RhizosphereMLQAMVREGRSEDFGAATELLNRVWPHRVGSERALRHAAEAAPPDAHRRYWAAEADGRL
Ga0070675_10065718913300005354Miscanthus RhizosphereMLQIMVREGGSEDFGSATELLNRVWPYRVGSERGLRHAAAAEPPNAHRRYWAADDAGKLVGWATAAIEYQSSERPGFLQVSVAQESRKAGLG
Ga0070709_1150245713300005434Corn, Switchgrass And Miscanthus RhizosphereMVREGTRDDFGSATELLNCVWPHRVGSERGLRHRADGAPPEAHRTYWAAEDAGKLVGWATAAIEYQSTDRPGF
Ga0070663_10162579723300005455Corn RhizosphereMVREGGSEDFGSATELLNRVWPHRVGSERGLRHASAAAPPNAHRRYWAAEDSGKLVGWATAGIEYQSSERP
Ga0070681_1116561823300005458Corn RhizosphereMLRVMVREGRREDFGCATELLNRVWPYRVGSERGLRHAADAAPPNAHRRYWAAEVDGKLVGWAT
Ga0070686_10148394413300005544Switchgrass RhizosphereMLRVMVREGGSEDFGSATDLLNRVWPYRVGSERGLRHAAASAPPNAHRRYWAADDAGKLVGWATAGIEYQSSERPGFLQASV
Ga0070665_10262235213300005548Switchgrass RhizosphereMVREGRREDFGSATELLNHVWPHRVGSERGLRHAADAAPPDAHRRYWAAEDGAKLVGWATAAIEYQSAERPGFLDVSVAPEARKAGL
Ga0070704_10225003413300005549Corn, Switchgrass And Miscanthus RhizosphereMLRVMVREGGSEDFGSATDLLNRVWPHRVGSERGLRHAAASAPPNAHRRYWAADDAGKLVGWATAGIEYQSSERPGFLQASVALELRN
Ga0066670_1078603723300005560SoilMLRILVREGGREDFGAATELLNRIWPYRVGSERGLRHTAETEPANAHRRYWAAEEDGKLVGWATAAIE
Ga0068854_10090789323300005578Corn RhizosphereVVREGGSEDFGSATDLLNRVWPYRVGSERGLRHAAASAPPNAHRRYWAADDAG
Ga0066654_1013155713300005587SoilMVGIMVREGRSEDFGAATELLNRVWPYRVGSELSLRHACDAEPPDAHRRYWAA
Ga0068852_10033618333300005616Corn RhizosphereMLQAMVREGRSEDFGAATELLNRVWPHRVGSERALRHAAEAAPPDAHRRYWAAEADGRLVGWATATIEHHSAQRPGFLQVS
Ga0068870_1064341913300005840Miscanthus RhizosphereMVREGGSEDFGSATELLNRVWPHRVGSERGLRHASAAAPPNAHRRYWAAEDAGKLVGW
Ga0070717_1167769823300006028Corn, Switchgrass And Miscanthus RhizosphereMVREGRREDFGSATELLNHVWPHRVGSERGLRHAADAAPPDAHRRYWA
Ga0066696_1077597323300006032SoilMLRIMVREGRSEDFGSATELLNRVWPYRVGSERGLRHAADAEPPNAHRRYWAAEDDGKLVGWATAAIE
Ga0070712_10146185023300006175Corn, Switchgrass And Miscanthus RhizosphereMVREARSEDFRSATELLNRVWPLRVGSERGLRHAADAAPPNAHRRYWAAEQDGKLVGWATAAIEY
Ga0075425_10054898913300006854Populus RhizosphereMVREGGSEDFGSATELLNRVWPHRVGSERGLQHASAAAPPNAHRRYWAAEDAGKLVGWA
Ga0075434_10117211323300006871Populus RhizosphereMLRMMVREGRSEDFGSANELLNRVWPHRVGSEQGFRHAADAAPPNAHRRYWAAGDDGKLVGWATAAIEYQSAERPGFLQASV
Ga0075434_10132094313300006871Populus RhizosphereMVREGGSEDFGSATELLNRVWPHRVGSERGLRHASAAAPPNAHRRYWAAEDSGKLVGWATAGIEYQSAERPGFLQASV
Ga0105245_1198270523300009098Miscanthus RhizosphereMLQIMVREGGSEDFGSATELLNRVWPYRVGSERGLRHAAAAEPPNAHRRYWAAEDAGRLVGWATAAIEYQSSERPGFL
Ga0075423_1038358633300009162Populus RhizosphereMVREGGSEDFGSATELLNRVWPYRVGSERGLRHAAAAEPPNAHRRYWAAEDAGRLVGWATAAIEYQSSERPGFLQV
Ga0134084_1021494113300010322Grasslands SoilMLRIMVREGRSEDFGSATELLNSVWPHRVGSERGLRHAADAEPPNAHRRYWAAEDDGKLVGWATAAIEYQSAERPGFLQ
Ga0134066_1038117923300010364Grasslands SoilMLRIMVREGRREDFGSATELLNRVWPHRVGSEQGLRHAAEAEPPNAHRRYWAAE
Ga0134128_1047659333300010373Terrestrial SoilMVREGGSEDFGSATELLNRVWPHRVGSERGLRHAAAAVPPNAHRRYWAAEDAGELVAWATAAIEYQSSERPGFL
Ga0134128_1251389713300010373Terrestrial SoilMLRVMVREGRREDFGCATELLNRVWPYRVGSERGLRHAADAAPPNAHRRYWAAEVDGKLVGWATAAIEHQ
Ga0105239_1356534523300010375Corn RhizosphereMLRIMVREGGSEDFGSATELLNRVWPYRVGSERGLRHAAAAEPPIAHRRYWAAEEAGKLVGWATAAIEYQSSE
Ga0134124_1142212313300010397Terrestrial SoilMVREGRREDFGSATELLNHVWPHRVGSERGLRHAADAAPPDAHRR
Ga0134123_1051642523300010403Terrestrial SoilMVREGGSEDFGSATELLNRVWPHRVGSERGLRHASAAAPPNAHRRYWAAEDAGKLVGWATAGIEYQSSE
Ga0105246_1100681213300011119Miscanthus RhizosphereMVREGGSEDFGSATELLNRVWPHRVGSERGLRHASAAAPPNAHRRYWAAEDAGKLVGWATAGIEYQSSERPGFLQASVAPE
Ga0105246_1125076613300011119Miscanthus RhizosphereMLRIMVREGGSEDFGSATELLNRVWPYRVGSERGLRHAAAAEPPIAHRRYWAAEEAGRIVGWATAAIE
Ga0137424_103125413300011412SoilMLRIMVREGRSEDFGSANELLNRVWPHRVASERSLRHAADAAPPNAHRR
Ga0120134_110254213300012004PermafrostMVREGTREDFGSAAELLNRVWPHRVGSERGLRHAADAAPADARRRCWAAEDDGKLVGWATAAIEYQSAERPGFL
Ga0120174_102808623300012008PermafrostMLRIMVREGRSEDFGSATELLNRVWPHRVGSERSLRHAADAEPPNAHRRYWAAEDDGKLVAWATAVIEFQSAERPGFLQA
Ga0136632_1004990113300012093Polar Desert SandVSLGFEGPILWIMLREGSREDFGSATDLLNRVWPHRVGSERGLRHAAAVEPPDAQRRYWA
Ga0137364_1022360813300012198Vadose Zone SoilMLRIMVREGRSEDFGSATELLNRVWAHRVGSERGLRHAADAEPPNAHRRYWAAEDDGKLVGWATAAIEDQSAERPGFLQVSV
Ga0137364_1136259013300012198Vadose Zone SoilMVREGMSEDFGSATELLNRVWPHRVGSERGLRHAADAAPPNAHRRYWA
Ga0137376_1027814953300012208Vadose Zone SoilMLRIMVREGRSEDFGSATELLNRVWAHRVGSERGLRHAADAEPPNAHRRYWAAEDDGKLVGWATAAIE
Ga0164300_1021880533300012951SoilVVREGGSEDFGSATDLLNRVWPYRVGSERGLRHAAASAPPNAHRRYWAADDAGKLVG
Ga0164298_1004487433300012955SoilVVREGGSEDFGSATDLLNRVWPYRVGSERALRHAAAAAPPHAHRRHWAAEDGGRLVGWATAAIEYQSAERPGFLQVGVGQESRNAGLGT
Ga0164309_1083836613300012984SoilMVREGGSEDFGSATDLLNRVWPHRVGSERGLRHAAASAPPNAHRRYWAADDAGKLVGWATAGIEYQS
Ga0164308_1069513313300012985SoilMVREGGSEDFGSATDLLNRVWPHRVGSERGLRHAAASAPPNAHRRYWAADDAGKLVGWATAGI
Ga0164304_1032969133300012986SoilMMVREGRSEDFGSANELLNRVWPHRVGSEQGFRHAADAAPPNAHRRYWAAEDDGKLVGWATAAIEYQSA
Ga0164304_1069049113300012986SoilMLRVMVREGGSEDFGSATDLLNRVWPYRVGSERGLRHAAASAPPNAHRRYWAADDAGKLVGWATAGIEYQSSERPGFLQA
Ga0157374_1175484023300013296Miscanthus RhizosphereMVREGGSEDFGSATDLLNRVWPYRVGSERGLRHAAASAPPNAHRRYWAAD
Ga0163162_1070237723300013306Switchgrass RhizosphereMLWIITVREGGSEDCGSATELLNRVWPHRVGSERGLRHAAAAEPPNGHRRYWAAEDEGKLVGWATAAIEYQSSERPGFLQASVAQESRKS
Ga0163162_1347798923300013306Switchgrass RhizosphereMLQIMVREGGSEDFGSATELLNRVWPYRVGSERGLRHAAAAEPPNAHRRYWAADDAGKLVGWATAAIEYQSSERPGFLQASVA
Ga0157375_1009962413300013308Miscanthus RhizosphereMVREGGSEDFGSATELLNRVWPHRVGSERGLRHASAAAPPNAPRRYRAAEDSGK
Ga0157375_1136228923300013308Miscanthus RhizosphereMVREGRREDFGSATELLNHVWPHRVGSERGLRHAADAAPPDAHRRYWAAEDGAKLVGWATAAIEYQSAERPGFLDVSVA
Ga0157375_1291687423300013308Miscanthus RhizosphereMVREGGSEDFGSATDLLNRVWPYRVGSERGLRHAAASAPPNAHRRYWAADDAGKLVGWATAGIEYQ
Ga0120149_107777013300014058PermafrostMLRIMVREGRSEDFGSATELLNRVWPHRVGSERSLRHAADAEPPNAHRRYWAAEDDG
Ga0134081_1013451233300014150Grasslands SoilMLRIMVREGRSEDFGSATELMNRVWAHRVGSERSLRHAADSAPPNAHRRYWAAVDDGKLV
Ga0163163_1089720813300014325Switchgrass RhizosphereMVREGGSEDFGSATELLNRVWPHRVGSERALRHTAAAEPQEARRRYWAAEAGG
Ga0157380_1162930023300014326Switchgrass RhizosphereMVREGGSEDFGSATELLNRVWPHRVGSERGLRHASAAAPPNAHRRYWAAEDSGKLVGWATAGIEYQSSERPGFLQASVAP
Ga0157380_1267991013300014326Switchgrass RhizosphereFGAATTLLNRVWPHRVGSERGLRHAAAGEPTDAHRR*
Ga0157376_1047159923300014969Miscanthus RhizosphereVVREGGSEDFGSATDLLNRVWPYRVGSERGLRHAAASAPPNAHRRYWAADDAGKLVGRATAGIE
Ga0167629_117996713300015209Glacier Forefield SoilMLRIMVREGRSGDFGSATVLLNRVWPHRVVSERGLRHTADAAPPKAHRRYWAAEGDGKLVGWATAAIEYQSAERPGFLEVSVAPES
Ga0132256_10359099323300015372Arabidopsis RhizosphereMLRIMVREGGSEDFGSATELLNRVWPYRVGSERGLRHAAAAEPPNAHRRYWAAEDAGKLVGWATAAIEYQSSERPGFLQV
Ga0132257_10353605923300015373Arabidopsis RhizosphereMLRIMVREGASEDFGSATELLNRVWPYRVGSERGLRHAAAAEPPNAHRRYWAAEDAGKLVGWATAAIEY
Ga0132255_10508358013300015374Arabidopsis RhizosphereMVREGGSEDFGSAAELLNRVWPHRVGSERGLRHLADAAPPNAHRRFWAAEDDGEL
Ga0066655_1074768423300018431Grasslands SoilMLRIMVREGRSEDFGSATELLNSVWPHRVGSERGLRHAADAAPANAHRRYWAAEDDGKLVGWATAAIEYQSAER
Ga0206354_1120561723300020081Corn, Switchgrass And Miscanthus RhizosphereMLQGMVREGRSEDFGAATELLNRVWPHRVGSERALRHAAEAAPPDAHRRHWAAEGDGRLVGWATAAIE
Ga0206353_1190519833300020082Corn, Switchgrass And Miscanthus RhizosphereMLQAMVREGRSEDFGAATELLNRVWPHRVGSERALRHAAEAAPPDAHRRYWAAEGDGRLVGWATATIEHHSAQRPGFLQVSVAP
Ga0207643_1037891633300025908Miscanthus RhizosphereVVREGRREDFGSAAELLNVVWPHRVGSERGLRHAADVAPPIAHRRYWAAEDGGKLVGW
Ga0207660_1149357323300025917Corn RhizosphereMVREGGSEDFGSATELLNRVWPHRVGSERGLQHASAAAPPNAHRRYWAAEVDGKLVGWATAAIEHQSAERPGFLEASVAP
Ga0207652_1184717523300025921Corn RhizosphereVVREGGSEDFGSATDLLNRVWPYRVGSERGLRHAAAAEPPNAHRRYWAAEDAGRLVGWATAAIEYQSSERPGFLQASV
Ga0207700_1027025513300025928Corn, Switchgrass And Miscanthus RhizosphereMVREGTRDDFGSATELLNRVWPHRVGSERGLRHRADGAPPEAHRTYWAAEDAGKLVGWATAAIEYQSTDRPGFLEVSVAPESRRAGF
Ga0210089_105078723300025957Natural And Restored WetlandsMLRVMVREGGREDFGSATELLNRVWPHRVGSERGLRHAAAAEPPNAYRRYWAAED
Ga0207703_1226254723300026035Switchgrass RhizosphereMPVRERGAERFSSRLMLRIMVREGGSEDFGSATELLNRVWTHRVGSERGLRHAAAAAPREAHRCYWAAEDAGKLV
Ga0207641_1262683213300026088Switchgrass RhizosphereVVREGGSEDFGSATDLLNRVWPYRVGSERGLRHAAASAPPNAHRRYWAADDAGKLVGW
Ga0207674_1026991933300026116Corn RhizosphereMLQAMVREGRSEDFGAATELLNRVWPHRVGSERALRHAAEAAPPDAHRRYWAAEADGRLVGWATAAIEHHSAQRPGFLQVSVAPESRNA
Ga0207674_1153223413300026116Corn RhizosphereMLRIMVREGGSEDFGSATELLNRVWTHRVGSERGLRHAAAAAPREAHRRYWAAEDAGKL
Ga0207683_1008214843300026121Miscanthus RhizosphereMLSTVLREGTREDFGSATELLNRVWPLRVGSERGLRHAAAAGPQEAHRRYWAAEIDG
Ga0207698_1128807123300026142Corn RhizosphereMLQAMVREGRSEDFGAATELLNRVWPHRVGSERALRHAAEAAPPDAHRRYWAAEADGRLVGWATATIEHHSAQRPGFLQVSVA
Ga0209577_1064331113300026552SoilMLRIMVREGRREDFGSATELLNRVWPHRVGSERGLRHAADAEPPDAHRHYWAAEDDGKLVGWA
Ga0209254_1014437043300027897Freshwater Lake SedimentMLRVVVREGRSEDFASATELLNRVWLYRVGSERGLRHAAAAQPPDAYHRYWA
Ga0268265_1155426213300028380Switchgrass RhizosphereVVREGRREDFGSAAELLNVVWPHRVGSERGLRHAADVAPPIAHRRYWAAEDGGKLVGWA
Ga0265319_103775713300028563RhizosphereMLRVMVREGRSEDFASATELLNRVWPHRVGSERGLRHTADAAPPNAHRRYWAAEDYGELVGWATA
Ga0302169_1007049513300028679FenMLRIMVREGGSEDFGSATELLNRVWSHRVGSERGLRHTAAAEPPDAHRRYWAAEDDGRLVGWATAVIEYQSSERPGFLQASVLPESRQTGL
Ga0307280_1009001223300028768SoilMLRVMVREGGSEDFGSATELLNRVWPHRVGSERGLRHAAAAEPPNAHRIYWAAEDAGELVGWATAVIEYQSSERPGFLQASVAQE
Ga0307323_1038079113300028787SoilMLRVMVREGGSEDFGSATELLNRVWPHRVGSERGLRHAAAAEPPNAHRIYWAAEDAGEL
Ga0307312_1068400013300028828SoilMLSIMLREGTREDFGSATELLNRVWPLRVGSERGLRHSAAAEPPDAHRRYWAAEDGGELVGW
Ga0307314_1001908533300028872SoilMLRIMVREGRREDFGSATGLLNRVWPYRVGSERSLRYAAETAPPTAHRRYWAAERGGQLAGWATAAIEYQSAERPGFLQVSVAPDSRKAGLG
Ga0307304_1049495623300028885SoilMLRSMVREGRSEDFGSATELLNRVWPLRVGSERGLRHSAAAEPPDAHRRYWAAEDGGELVGWATAAID
Ga0247826_1128509313300030336SoilVGVIPDAAYAARMVREGTDEDFGSATELLNRVWPHRVGSERALRHTAAAEPPDARRRYWAAEAGGKLVVW
Ga0307495_1023063423300031199SoilMLRIMVREGRSEDFGSANELLNRVWPHRVGSEQGFRHAADAAPPNAHRRYWAAEDDGKLVGWAAAA
Ga0311364_1062866923300031521FenMLRIMVREGGSEDFGSATELLNRVWSHRVGSERGLRHTAAAEPPDAHRRYWAAEDDGRLVGWATAVIEYQSS
Ga0315290_1017549713300031834SedimentVVREGRREDFGSATELLNRVWPHRVGSERGLRHAAAAEPPDAHRRYWAAEDGGELVGWAT
Ga0302322_10333704013300031902FenMVRKGTSEDFGSATELLNGVWPHRVGSERGLRHAAAAEPPDARRRYWAAEDDGRLVGWATAAIEYQSSE
Ga0315275_1011717813300032401SedimentVVREGRREDFGSATELLNRVWPHRVGSERGLRHAAAAEPPDAHRRYWAAE
Ga0310810_1104214813300033412SoilVTRLREGTSEDFGSATELLNRVWPYRVGSERGLRHTADAAPTDAHRRYWAAEDAGELVGWATAAIEHQSAERPGF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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