Metagenome / Metatranscriptome Family F105960

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F105960
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	130 residues
Representative Sequence	VALRWWWAALVAGGFLVGRVSAGGPDRHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRNGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR
Number of Associated Samples	85
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.00 %
% of genes near scaffold ends (potentially truncated)	45.00 %
% of genes from short scaffolds (< 2000 bps)	78.00 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.000 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.86% β-sheet: 0.00% Coil/Unstructured: 42.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF13360	PQQ_2	30.00
PF13609	Porin_4	17.00
PF01011	PQQ	7.00
PF07690	MFS_1	2.00
PF13570	PQQ_3	1.00
PF00534	Glycos_transf_1	1.00
PF16881	LIAS_N	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	71.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	71.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	71.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	71.00 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	71.00 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	71.00 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	71.00 %
Bosea sp. 117	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. 117	1.00 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003319\|soilL2_10003669	All Organisms → cellular organisms → Bacteria → Proteobacteria	2711	Open in IMG/M
3300003319\|soilL2_10075840	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1027	Open in IMG/M
3300003321\|soilH1_10146512	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1778	Open in IMG/M
3300003324\|soilH2_10332589	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300004157\|Ga0062590_100860361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	843	Open in IMG/M
3300004463\|Ga0063356_100072622	All Organisms → cellular organisms → Bacteria → Proteobacteria	3589	Open in IMG/M
3300004799\|Ga0058863_10032117	All Organisms → cellular organisms → Bacteria → Proteobacteria	3940	Open in IMG/M
3300004808\|Ga0062381_10281329	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	606	Open in IMG/M
3300005332\|Ga0066388_102524097	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	934	Open in IMG/M
3300005440\|Ga0070705_100734794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	779	Open in IMG/M
3300005458\|Ga0070681_11335800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. 117	640	Open in IMG/M
3300005467\|Ga0070706_100684257	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	952	Open in IMG/M
3300005467\|Ga0070706_100743384	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	909	Open in IMG/M
3300005471\|Ga0070698_100135411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2417	Open in IMG/M
3300005526\|Ga0073909_10564427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	558	Open in IMG/M
3300005536\|Ga0070697_101393772	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	626	Open in IMG/M
3300005539\|Ga0068853_101570194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	637	Open in IMG/M
3300005546\|Ga0070696_100094427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2134	Open in IMG/M
3300005546\|Ga0070696_100648258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	856	Open in IMG/M
3300005546\|Ga0070696_100716552	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	817	Open in IMG/M
3300005564\|Ga0070664_101088285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	752	Open in IMG/M
3300005577\|Ga0068857_101778824	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	603	Open in IMG/M
3300005598\|Ga0066706_10290507	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300005841\|Ga0068863_100088010	All Organisms → cellular organisms → Bacteria → Proteobacteria	2943	Open in IMG/M
3300005877\|Ga0075296_1010576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	697	Open in IMG/M
3300005887\|Ga0075292_1007320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1356	Open in IMG/M
3300006163\|Ga0070715_10692456	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	608	Open in IMG/M
3300006755\|Ga0079222_10002110	All Organisms → cellular organisms → Bacteria → Proteobacteria	5964	Open in IMG/M
3300006806\|Ga0079220_10036530	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2221	Open in IMG/M
3300006852\|Ga0075433_10058994	All Organisms → cellular organisms → Bacteria → Proteobacteria	3357	Open in IMG/M
3300006852\|Ga0075433_10933568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300006852\|Ga0075433_11413441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	602	Open in IMG/M
3300006853\|Ga0075420_100436736	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1131	Open in IMG/M
3300006854\|Ga0075425_100741510	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1127	Open in IMG/M
3300006854\|Ga0075425_101307674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	822	Open in IMG/M
3300006904\|Ga0075424_100163825	All Organisms → cellular organisms → Bacteria → Proteobacteria	2357	Open in IMG/M
3300006954\|Ga0079219_10006125	All Organisms → cellular organisms → Bacteria → Proteobacteria	3700	Open in IMG/M
3300006954\|Ga0079219_10943162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	705	Open in IMG/M
3300009012\|Ga0066710_102308622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	782	Open in IMG/M
3300009840\|Ga0126313_10202842	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1523	Open in IMG/M
3300010039\|Ga0126309_10308230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	917	Open in IMG/M
3300010042\|Ga0126314_10550796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	839	Open in IMG/M
3300010166\|Ga0126306_11820221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	510	Open in IMG/M
3300010371\|Ga0134125_10948063	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300010373\|Ga0134128_12172103	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	611	Open in IMG/M
3300010396\|Ga0134126_12734960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	535	Open in IMG/M
3300010397\|Ga0134124_10951667	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	868	Open in IMG/M
3300012205\|Ga0137362_10488988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1065	Open in IMG/M
3300012212\|Ga0150985_100278346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2131	Open in IMG/M
3300012212\|Ga0150985_108141062	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1056	Open in IMG/M
3300012355\|Ga0137369_10285565	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300012469\|Ga0150984_103797455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	505	Open in IMG/M
3300012469\|Ga0150984_116511989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1699	Open in IMG/M
3300012917\|Ga0137395_10076685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2172	Open in IMG/M
3300012929\|Ga0137404_10941464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	789	Open in IMG/M
3300012955\|Ga0164298_10094409	All Organisms → cellular organisms → Bacteria → Proteobacteria	1568	Open in IMG/M
3300012957\|Ga0164303_10341645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	901	Open in IMG/M
3300012957\|Ga0164303_10562375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	743	Open in IMG/M
3300012958\|Ga0164299_10022190	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300012960\|Ga0164301_10182279	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300012986\|Ga0164304_11127650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	629	Open in IMG/M
3300012989\|Ga0164305_11136652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	673	Open in IMG/M
3300014968\|Ga0157379_10695889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	954	Open in IMG/M
3300015371\|Ga0132258_12218526	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300018482\|Ga0066669_10774725	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	848	Open in IMG/M
3300021445\|Ga0182009_10246401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	885	Open in IMG/M
3300025327\|Ga0209751_10403763	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300025905\|Ga0207685_10788330	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	523	Open in IMG/M
3300025922\|Ga0207646_10349254	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300025945\|Ga0207679_10495529	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1089	Open in IMG/M
3300025993\|Ga0208415_1006036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1111	Open in IMG/M
3300026088\|Ga0207641_10076472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2894	Open in IMG/M
3300026095\|Ga0207676_10574889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1079	Open in IMG/M
3300026116\|Ga0207674_11068608	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	776	Open in IMG/M
3300027765\|Ga0209073_10071071	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1183	Open in IMG/M
3300027775\|Ga0209177_10003684	All Organisms → cellular organisms → Bacteria	3004	Open in IMG/M
3300027778\|Ga0209464_10040811	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300027787\|Ga0209074_10001474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	4723	Open in IMG/M
3300027843\|Ga0209798_10040690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2447	Open in IMG/M
3300028717\|Ga0307298_10209514	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	575	Open in IMG/M
3300028792\|Ga0307504_10119306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	863	Open in IMG/M
3300030988\|Ga0308183_1041601	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	889	Open in IMG/M
3300031093\|Ga0308197_10099865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	857	Open in IMG/M
3300031548\|Ga0307408_100231922	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300031548\|Ga0307408_102381107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	514	Open in IMG/M
3300031824\|Ga0307413_10008483	All Organisms → cellular organisms → Bacteria → Proteobacteria	4856	Open in IMG/M
3300031852\|Ga0307410_10413066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1093	Open in IMG/M
3300031901\|Ga0307406_10144287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1690	Open in IMG/M
3300031903\|Ga0307407_10496021	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	894	Open in IMG/M
3300031903\|Ga0307407_11094988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	619	Open in IMG/M
3300031908\|Ga0310900_10752280	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	785	Open in IMG/M
3300031938\|Ga0308175_100006390	All Organisms → cellular organisms → Bacteria → Proteobacteria	8490	Open in IMG/M
3300032004\|Ga0307414_10553898	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1025	Open in IMG/M
3300032005\|Ga0307411_10073160	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2330	Open in IMG/M
3300032005\|Ga0307411_10151048	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300032017\|Ga0310899_10721040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	508	Open in IMG/M
3300032126\|Ga0307415_102321506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	526	Open in IMG/M
3300033412\|Ga0310810_10026504	All Organisms → cellular organisms → Bacteria → Proteobacteria	7044	Open in IMG/M
3300033412\|Ga0310810_10626770	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300033513\|Ga0316628_100758838	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1277	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.00%
Host-Associated	Host-Associated	34.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.00%
Plants	Host-Associated → Plants	33.00%
Aquatic	Environmental → Aquatic	3.00%
Human	Host-Associated → Human	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.00%
Freshwater	Environmental → Aquatic → Freshwater	3.00%
Digestive System	Host-Associated → Human → Digestive System	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.00%
Loam	Environmental → Terrestrial → Soil → Loam	14.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.00%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.00%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.00%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	11.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.00%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	4.00%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.00%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.00%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.00%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.00%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005877	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilL2_100036695	3300003319	Sugarcane Root And Bulk Soil	MAGLAALGFAAGRAGAGPDRHWAEWNGEDWRALGPEAQVAYVDGFLAGAGFTQAAGRREVADSAGLRDTLDALRRSGRFRFPYGANVYVSRLSDYYWWENHRPLPTWYALWEVNASLIGPTSEPAR*
soilL2_100758401	3300003319	Sugarcane Root And Bulk Soil	VGRASAGGPERHWSMQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
soilH1_101465122	3300003321	Sugarcane Root And Bulk Soil	VGRASAGGPERHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNAS
soilH2_103325892	3300003324	Sugarcane Root And Bulk Soil	VAAAGILVGRASAGAPERHWSLQDGTDWKALAPEAQVAYTNGFLAGAGFAQALPTGCRAGCPTADSAGLRDTMAALYRNGGFRFPYAANVYVSRVNDYYWWENHRPLPLWYAFWEVNASLIGPTDSAR*
Ga0062590_1008603611	3300004157	Soil	VAGGFLAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGFGQASSAASDSAGLRETMATLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNTSLTGPTTEPAR*
Ga0063356_1000726222	3300004463	Arabidopsis Thaliana Rhizosphere	VAIRWWWTALAAAGFLTGRLSTGPDRHWTARTGEDWRALGPEAQFAYADGFLAGAGFAQAQVAADSGRSGADSAGLEATMAALHRTGRFRFPYAANVYVTRINDYYWWVDHRPQPTWYAFWEVNTSLTRPTNDPAR*
Ga0058863_100321173	3300004799	Host-Associated	VAARWWWAALAAAGVVGGHTSSALEPGRHWSVRDGNDWRALGPEAQAAYTDGFLAGAGFMQAAGPGAGRMTVDSAGLRDTMTALYRSGRFRLPYGANVYVSRLNDYYWWENHRPLPIWYAFWEVNTSLIGPTTEPAR*
Ga0062381_102813291	3300004808	Wetland Sediment	GRVSAGPGPDRHWSARNGDDWRALGPEAQVAYTDGFLAGAGYAQAAVAGLERPEWTADSAGLHETMATLYRTGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTSDTAR*
Ga0066388_1025240972	3300005332	Tropical Forest Soil	VAIRWWWAALVAGGFLGGRVSAGGPERHWSVQDGTDWRTLGPEARQAYADGFLAGAGLGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNTSLTGPTTEPAR*
Ga0070705_1007347941	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PPLGVPLPAASFVRIVASRWWWAALVAGGFLAGRVSARGPDRHWSALNGEDWRALGPGAQVAYADGFLTGVGFGQASTAAADSAGLRETMASLYRNGRFRFPYAANVYVSRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0070681_113358001	3300005458	Corn Rhizosphere	VAGGFLAGRASAGGPERHWSVQDGNDWRTLSPEARQAYADGFLAGAGFGQAAGTASDSAGLREAMTTLHRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNTSLTGPTTEPAR*
Ga0070706_1006842571	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SSVTRSWWWAALCAVGFVGGRASAGLDPHRHWSARNGDDWRAMGPEAQVAYTDGFLAGAGFAQAAETAADSAGLRAAVTSLQQSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR*
Ga0070706_1007433841	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VPLPAASFVRIVASRWWWAALVAGAFLAGRVSARGPDRHWSAQNGEDWRALGPGARVAYADGFLTGVGFGQASTAAADSAGLRETMASLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0070698_1001354111	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VPLPAASFVRIVASRWWWAALVAGGFLAGRVSARGPDRHWSAQNGEDWRALGPGARVAYADGFLTGVGFGQASTAAADSAGLRETMASLYRNGRFRFPYAANVYVSRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0073909_105644271	3300005526	Surface Soil	VATRWWWAALAAAGFLAGRVSAGPGPDRHWSARNGEDWRALGPEAQIAYADGFLTGAGFAQASEGAARDSAALRDTMATLHRAGRFRFPYAANVYVTRLNDYYWWENHRPLPIWYAFWEVNTSLTG
Ga0070697_1013937722	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AGRVSAGPGPDRHWSARNGEDWRALGPEAQIAYADGFLAGAGFAQASEGAARDSAALRDTMATLHRAGRFRFPYAANVYVTRLNDYYWWENHRPLPIWYAFWEVNTSLTGPATEPAR*
Ga0068853_1015701941	3300005539	Corn Rhizosphere	VAARWWWAALAAAGVLGGHASTALEPGRHWSVRDGNDWRALGPEAQAAYTDGFLAGAGFMQAAGPGAGRMTVDSAGLRDTMTALYRSGRFRLPYGANVYVSRLNDYYWWENHRPLPIWYAFWEVNTSLIGPTTEPAR*
Ga0070696_1000944272	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VATRWWWAALGAVGFLAGRVSAGPGPDRHWSARNGEDWRAFGPDAQMAYADGFLAGAGFAQAAGSASDSAALRETMATLHRSGRFRFPYSANVYVTRLNDYYWWRNHRPLPTWYAFWEVNTSLTG
Ga0070696_1006482582	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RRRGSNRQQRPVGAPPRSPCRPIPLGQSVAIRWGWAALAAAGFLAGWASAGGPERHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRINDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0070696_1007165521	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VATRWWWAALAAVGFLAGRVSAGPGPDRHWSARNGEDWRALGPEAQIAYADGFLAGAGFAQASEGAARDSAALRDTMATLHRAGRFRFPYAANVYVTRLNDYYWWENHRPLPIWYAFWEVNTSLTGPATEPAR*
Ga0070664_1010882851	3300005564	Corn Rhizosphere	MRSPCRPIPLGRIVATQWWWAVLVTGGFLAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGLGQASSAASDSAGLRETMTALYRSGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPT
Ga0068857_1017788241	3300005577	Corn Rhizosphere	SPCRPIPLGRIVATRWWWAVLVAGGFLAGRASAGGPERHWSVQDGGDWRTLGPDARLAYADGFLAGAGLGQASSAASDSAGLRETMTALYRSGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR*
Ga0066706_102905072	3300005598	Soil	VTRSWWWAALCAAGFVGGRASAGLDPHRHWSARNGDDWRAMGPEAQVAYTDGFLAGAGFAQAAETAADSAGLRAAVTSLQQSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR*
Ga0068863_1000880102	3300005841	Switchgrass Rhizosphere	MRSPCRPIPLGRIVATQWWWAVLVTGGFLAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGLGQASSAASDSAGLRETMTALYRSGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR*
Ga0075296_10105761	3300005877	Rice Paddy Soil	MLVGRASAGAPDRHWSLQDGTEWKALAPAAQLAYANGFLAGAGFAQALPPGCRAGCMTADSAGLRDTMAALYRSGGFRFPYAANVYVTRVNDYYWWENHRPLPLWYAFWEVNASL
Ga0075292_10073201	3300005887	Rice Paddy Soil	MLVGRASAGAPDRHWSLQDGTEWKALAPAAQLAYANGFLAGAGFAQALPPGCRAGCMTADSAGLRDTMAALYRSGGFRFPYAANVYVTRVNDYYWWENHRPLPLWYAFWEVNASLIGPTDSAR*
Ga0070715_106924562	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LCRPIPLGRIVASRWWWAAFVAGGFLAGRASAGGPDRHWSVQDGEDWRALGPEARMAYADGFLAGAGLGQAGSTAADSAGLRDAMTALYRNGRFRFPYGANVYVARVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR*
Ga0079222_100021103	3300006755	Agricultural Soil	VALRWWWAALVAGGFLVGRVSAGGPDRHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRNGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0079220_100365303	3300006806	Agricultural Soil	SAGGPDRHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0075433_100589942	3300006852	Populus Rhizosphere	VRIVTSRWWWAALVAGGFLAGRVSARGPDRHWSAQNGEDWRALGPEARVAYADGFLTGVGFGQASTAAADSAGLRETMASLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0075433_109335682	3300006852	Populus Rhizosphere	VRSPCRPIPLGQIVAIRWWWAALVAGGFLVGRASAGGPERHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRINDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0075433_114134411	3300006852	Populus Rhizosphere	MRSPCRPIPLGRIVATRWWWAVLVTGGFLAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGLGQASSAASDSAGLRETMTALYRSGRFRFPYGANVYVTRVNDYYWWENHRPLPIWY
Ga0075420_1004367362	3300006853	Populus Rhizosphere	VAGGFLAGRVSAGLNPDRHWSERDGEDWRALGPDAQVAYANGFLAGAGLAQAAGSAADSAGLRQTMATLHRSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTDTAR*
Ga0075425_1007415102	3300006854	Populus Rhizosphere	VTRSWWWAALCAVGFVGGRASAGLDPHRHWSARNGDDWRAMGPEAQVAYTDGFLAGAGFAQAAETAADSAGLRAAVTSLQQSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR*
Ga0075425_1013076742	3300006854	Populus Rhizosphere	VPLPAASFVRIVTSRWWWAALVAGGFLAGRVSARGPDRHWSAQNGEDWRALGPEARVAYADGFLTGVGFGQASTAAADSAGLRETMASLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0075424_1001638252	3300006904	Populus Rhizosphere	MRSPCRPIPLGRIVATRWWWAVLVTGGFLAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGLGQASSAASDSAGLRETMTALYRSGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR*
Ga0079219_100061252	3300006954	Agricultural Soil	VALRWWWAALVAGGFLVGRVSAGGPDRHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0079219_109431622	3300006954	Agricultural Soil	VAIRWWWAALVAGGFLAGRASAGGPERHWSVQDGNDWRTLSPEARQAYADGFLAGAGFGQAAGTASDSAGLREAMTTLHRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYG
Ga0066710_1023086221	3300009012	Grasslands Soil	VPLPAASFVRIVASRWWWAALVAGGFLAGRVSARGPDRHWSAQNGEDWRALGPGARVAYADGFLTGVGFGQASTAAADSAGLRETMASLYRNGRFRFPYAANVYVTRLNDYYWWENHRPLPIWYAFWEVNTSLTGPATEPAR
Ga0126313_102028422	3300009840	Serpentine Soil	VAIRWWWTAFAAAGFLTGRLSTGPDRHWTARTGEDWRALGPEAQFAYADGFLAGAGFAQAQDALDAGRSGADSAGLDTTMAALHRTGQFRFPYAANVYVSRINDYYWWVNHRPLPTWYAFWEVNTSLTRPTNNPAR*
Ga0126309_103082301	3300010039	Serpentine Soil	VSAGLGPDRHWSARDGNDWRALGPAERIAYVDGFLAGAGFTQAAAAWPSTQADSTGLRDTVATLTRTGRFRFPYAANVYLTRVNDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR*
Ga0126314_105507962	3300010042	Serpentine Soil	RHWTARTGEDWRALGPEAQFAYADGFLAGAGFAQAQDALDAGRSGADSAGLGTTMAALHRTGQFRFPYAANVYVSRINDYYWWVNHRPLPTWYAFWEVNTSLTRPTNNPAR*
Ga0126306_118202212	3300010166	Serpentine Soil	LTGRLSPGPDRPWTARTGEDWRAFGPEAQFAYADGFLAGAGFAQAQDTVDAGRSGADSAGLDTMVAALHRTGRFRFPYAANVYVSRINDYYWWVNHRPQPTWYAFWEVNTSLTRPTNDPAR*
Ga0134125_109480632	3300010371	Terrestrial Soil	VAIRWWWAALVAGGFLAGRASAGGPERHWSVQDGNDWRTLSPEARQAYADGFLAGAGFGQAAGTASDSAGLREAMTTLHRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNTSLTGPTTEPAR*
Ga0134128_121721031	3300010373	Terrestrial Soil	IRWWWAALVAGGFLVGRASAGGPERHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTNEPAR*
Ga0134126_127349602	3300010396	Terrestrial Soil	AALVAGGFLAGRASAGGPERHWSVQDGNDWRTLSPEARQAYADGFLAGAGFGQAAGTASDSAGLREAMTTLHRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNTSLTGPTTEPAR*
Ga0134124_109516671	3300010397	Terrestrial Soil	LGRIVATQWWWAVLVTGGFLAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGFGQASSAASDSAGLRETMTTLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTIDSAR*
Ga0137362_104889882	3300012205	Vadose Zone Soil	GGRASAGLDPHRHWSARNGDDWRAMGPEAQVAYTDGFLAGAGFAQAAETAADSAGLRAAVTSLQQSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR*
Ga0150985_1002783461	3300012212	Avena Fatua Rhizosphere	EALPADSFGRHVATRQWWAVLAAVGFLAGRASAGPGPDRHWSARNGDDWRALGPQEQVAYVDGFLAGAGFAQAADAGAPGTAADSAGLRETMATLARTGRFRFPYGANVYLVRLNDYYWWENHRPLPTWYAFWEVNSSLTGKPNEPAQ*
Ga0150985_1081410621	3300012212	Avena Fatua Rhizosphere	VALAAVGFVAGRASAGPGPDRPWSARDGDDWRALGPKEQSAYVDGFLAGAGFAQATGAWPEGKTGADSAGLRDTMAALTRTGRFRFPYAANVYAVRLNDYYWWENHRPLPTWYAFWEVNTSLIGPRNEPAR*
Ga0137369_102855652	3300012355	Vadose Zone Soil	VGFVVGRASAGLNPDHHWSTRNGDDWRAMGPEARMAYADGFLAGAGFTQAVEGHPGELRGGTADSAGLRETMATLHRSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR*
Ga0150984_1037974551	3300012469	Avena Fatua Rhizosphere	FLAGRASAALNPDRHWSERDGQDWRALGPDAQVAYTDGFLAGAGFAQAAGSAADSAGLRQTMATLHRSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTNDAAR*
Ga0150984_1165119892	3300012469	Avena Fatua Rhizosphere	FLAGRASAALNPDRHWSERDGQDWRALGPEAQVAYADGFLAGAGFAQAAGSAADSAGLRQTMATLHRSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTNDAAR*
Ga0137395_100766852	3300012917	Vadose Zone Soil	VGGRASAGLDPHRHWSARNGDDWRAMGPEAQVAYTDGFLAGAGFAQAAETAADSAGLRAAVTSLQQSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR*
Ga0137404_109414641	3300012929	Vadose Zone Soil	LDPRRHWSARDGDDWRALGPGAQLAYTDGFLAGAGFAQAAETAADSAGLRAAMMGLQQSGRFRFPYGANVYAARINDYYWWENHRPLPTWYAFWEVNTSLTGPATEPAR*
Ga0164298_100944092	3300012955	Soil	VAGGFLAGRASAGGPERHWSVQDGGDWRTLGPDARLAYADGFLAGAGFGQASSAASDSAGLRETMTTLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR*
Ga0164303_103416452	3300012957	Soil	AGGFLAGRASAGGPERHWSVQDGGDWRTLGPDARLAYADGFLAGAGFGQASSAASDSAGLRETMTTLYRNGRFRFPYGANVYVTRVNDYYWWENNRPLPIWYGFWEVNASLTGPTIDSAR
Ga0164303_105623752	3300012957	Soil	MRSPCRPIPLGQIVATRWWWAVLAAGGFLAGRASAGGPEHHWSVQDGGDWRTLGPEARLAYADGFLTGAGFSQASSPASDSAGLREAMTTLYRNGRFRFPYSANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTT
Ga0164299_100221903	3300012958	Soil	MPADSFGQTVAIRWWWAVLAAGGFLAGRTIPGGPDRHWSVQDGMDWQALGPEARLAYADGILAGAGFGQASSAASDSAGLRETMATLYRNGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR*
Ga0164301_101822792	3300012960	Soil	LGQIVAIRWWWAALVAGGFLVGRASAGGPERHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTIDSAR*
Ga0164304_111276502	3300012986	Soil	VAGGFLAGRASAGGPERHWSVQDGGDWRTLGPDARLAYADGFLAGAGFGQASSAASDSAGLREAMTTLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR*
Ga0164305_111366521	3300012989	Soil	PLPADSFGQTVAIRWWWAVLAAGGFLAGRTIPGGPDRHWSVQDGMDWQALGPEARLAYADGFLAGAGFGQASSAASDSAGLRETMATLYRNGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR*
Ga0157379_106958891	3300014968	Switchgrass Rhizosphere	PNRSPCRPIPLGRIVATRWWWAVLVAGGFLAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGFGQASSAASDSAGLRETMATLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR*
Ga0132258_122185262	3300015371	Arabidopsis Rhizosphere	VAIRWWWAALVAGGFLAGRASAGGPERHWSVQDGNDWRTLSPEARQAYADGFLAGVGFGQAAGTASDSAGLREAMTTLHRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNTSLTGPTTEPAR*
Ga0066669_107747251	3300018482	Grasslands Soil	VAGGFLAGRASAGGPERHWSVQDGGDWRMLGPDARQAYADGFLAGAGFGQASSAASDSAGLRETMTTLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPMTDSA
Ga0182009_102464011	3300021445	Soil	VAGGFLVGRVSAGGPERHWSVQDGTDWRTLGPEARQAYADGFLAGAGLGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPA
Ga0209751_104037632	3300025327	Soil	VATRWWWTALGAVGFLAGRVSAGSGPDRHWSTQNGNDWRALGPEAQVAYADGFLAGAGFAQAAGGCSKGSEGACPERSEGDSAGLRETMATLYRTGRFRFPYGANVYVSRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTDTAR
Ga0207685_107883301	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	PDRHWSVQDGEDWRALGPEARMAYADGFLAGAGLGQAGSTAADSAGLRDAMTALYRNGRFRFPYGANVYVARVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR
Ga0207646_103492542	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTRSWWWAALCAVGFVGGRASAGLDPHRHWSARNGDDWRAMGPEAQVAYTDGFLAGAGFAQAAETAADSAGLRAAVTSLQQSGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR
Ga0207679_104955292	3300025945	Corn Rhizosphere	MRSPCRPIPLGRIVATQWWWAVLVTGGFLAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGLGQASSAASDSAGLRETMTALYRSGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTIDSAR
Ga0208415_10060362	3300025993	Rice Paddy Soil	MLVGRASAGAPDRHWSLQDGTEWKALAPAAQLAYANGFLAGAGFAQALPPGCRAGCMTADSAGLRDTMAALYRSGGFRFPYAANVYVTRVNDYYWWENHRPLPLWYAFWEVNASLIGPTDSAR
Ga0207641_100764722	3300026088	Switchgrass Rhizosphere	MRSPCRPIPLGRIVATQWWWAVLVTGGFLAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGLGQASSAASDSAGLRETMTALYRSGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR
Ga0207676_105748892	3300026095	Switchgrass Rhizosphere	LAGRASAGGPERHWSVQDGGDWRTLGPEARLAYADGFLAGAGFGQASSAASDSAGLRETMTTLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR
Ga0207674_110686081	3300026116	Corn Rhizosphere	LVAGGFLAGRASAGGPERHWSVQDGGDWRTLGPDARLAYADGFLAGAGLGQASSAASDSAGLRETMTALYRSGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR
Ga0209073_100710712	3300027765	Agricultural Soil	SAGGPDRHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR
Ga0209177_100036842	3300027775	Agricultural Soil	VALRWWWAALVAGGFLVGRVSAGGPDRHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR
Ga0209464_100408112	3300027778	Wetland Sediment	VAIRWWWAALGAVGFLAGRVSAGPGPDPHWSARNGDDWRALGPEAQVAYTDGFLAGAGYAQAAVAGLERPEWTADSAGLHETMATLYRTGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTSDTAR
Ga0209074_100014743	3300027787	Agricultural Soil	VALRWWWAALVAGGFLVGRVSAGGPDRHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRNGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTERAR
Ga0209798_100406902	3300027843	Wetland Sediment	VAIRWWWAALGAVGFLAGRVSAGPGPDPHWSARNGDDWRALGPEAQVAYTDGFLAGAGYAQAAVAGLERPEWTADSAGLHETMATLYRTGRFRFPYGANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTSDT
Ga0307298_102095141	3300028717	Soil	CADGVRPARQDEEVAACDGRQGPARGLAGRFLWMPAARWWWAALVAGGFLAGRVSAGRNPDRHWSERDGEDWRALGRDAQVAYTDGFLAGAGFAQAAAAAPDSAGLRQAMATLHRSGRFRFPYGANVYVARINDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR
Ga0307504_101193061	3300028792	Soil	SQRRPVGVPTREPCRPIPLGQIVATRWWWAVLVAGGFLAGRASAGGPERHWSVQDGGDWRTLGPDARLAYADGFLAGAGFGQASSAASDSAGLREAMTTLYRNGRFRFPYGANVYVTRINDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR
Ga0308183_10416012	3300030988	Soil	VAIRWWWTAVAAAGFLTGRLSTGPDRHWTARTGEDWRALGPEAQFAYADGFLAGAGFAQAQEAVDTGRSGADSVGLDTTMAALHRSGQFRFPYAANVYVSRINDYYWWVNHRPLPTWYAFWEVNTSLTRPTNDPAR
Ga0308197_100998651	3300031093	Soil	LVAGGFLAGRVSAGRNPDRHWSERDGEDWRALGRDAQVAYTDGFLAGAGFAQAAAAAPDSAGLRQAMATLHRSGRFRFPYAANVYVTRINDYYWWENHRPLPTWYAFWEVNTSLIGPTTEPAR
Ga0307408_1002319223	3300031548	Rhizosphere	VAARWWWAALGALGFLAGRASAGLGPDRHWSVWDGDDWRALGPDAQVAYTDGFLTGAGFAQAAGAGGETAADSAGLRDTMVALHRGGRFRFPYGANVYVSRINDYYWWENHRPLPTWYAFWEVNTSLTGPTTKPAR
Ga0307408_1023811071	3300031548	Rhizosphere	AALGALAFLAGRASAGPDRHWSTWDGDDWRGLGPEAQLAYTDGFLTGAGFAQAAGSGRGMAVDSAGLRDTMAALHRSGRFRFPYGANVYVSRLNDYYWWENHRPLPTWYAFWEVNTSLTGPTTEPAR
Ga0307413_100084833	3300031824	Rhizosphere	MRGCPAGRSMRTIVAARWWWAALGALAFLAGRASAGPDRHWSTWDGDDWRGLGPEAQLAYTDGFLTGAGFAQAAGSGRGMAVDSAGLRDTMAALHRSGRFRFPYGANVYVSRLNDYYWWENHRPLPTWYAFWEVNTSLTGPTTEPAR
Ga0307410_104130661	3300031852	Rhizosphere	PAGRSMRTIVAARWWWAALGALAFLAGRASAGPDRHWSTWDGDDWRGLGPEAQLAYTDGFLTGAGFAQAAGSGRGMAVDSAGLRDTMAALHRSGRFRFPYGANVYVSRLNDYYWWENHRPLPTWYAFWEVNTSLTGPTTEPAR
Ga0307406_101442871	3300031901	Rhizosphere	LGFLAGRASAGLGPDRHWSVWDGDDWRALGPDAQVAYTDGFLAGAGFAQAAGAGGETAADSAGLRDTMVALHRGGRFRFPYGANVYVSRINDYYWWENHRPLPTWYAFWEVNTSLTGPTTKPAR
Ga0307407_104960211	3300031903	Rhizosphere	VAIRWWWTAFAAAGFLTGRLSTGPDRHWTARTGEDWRALGPEAQFAYADGFLAGAGFAQAQDALDAGRSGADSAGLDTTMAALHRTGQFRFPYAANVYVSRINDYYWWVNHRPLPTWYAFWEVNTSLTRPTNNPAR
Ga0307407_110949881	3300031903	Rhizosphere	MRGCPAGRSMRTIVAARWWWAALGALAFLAGRASAGPDRHWSTWDGDDWRGLGPEAQLAYTDGFLTGAGFAQAAGSGRGMTVDSAGLRDTMAALHRSGRFRFPYGANVYVSRLNDYYWWENHRPLPTWYAFWEVNTSLTGPT
Ga0310900_107522802	3300031908	Soil	VGRASAGGPERHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTEPAR
Ga0308175_1000063905	3300031938	Soil	VAIRLWWVALVAGGFLVGRASARGPDRHWSTQDGNDWRTLGPEARQAYADGFLAGAGFGQAAVTASDSAGLRTTMTTLYRNGRFRFPYAANVYVTRVNDYYWWENHRPLPLWYGFWEVNASLTGPTTESAP
Ga0307414_105538981	3300032004	Rhizosphere	AGVLAGRFLWLTVAIRWWWTAFAAAGFLTGRLSTGPDRHWTARTGEDWRALGPEAQFAYADGFLAGAGFAQAQDALDAGRSGADSAGLDTTMAALHRTGQFRFPYAANVYVSRINDYYWWVNHRPLPTWYAFWEVNTSLTRPTNNPAR
Ga0307411_100731603	3300032005	Rhizosphere	VAIRWWWTAFAAAGFLTGRLSTGPDRHWTARTGEDWRALGPEAQFAYADGFLAGAGFAQAQDALDAGRSGADSAGLDTTMAALHRTGQFRFPYAANVYVSRINDYYWWVNHRPLPTWYAFWEVNTSLTRPTNDPAR
Ga0307411_101510482	3300032005	Rhizosphere	MRGCPAGRSMRTIVAARWWWAALGALAFLAGRASAGPDRHWSTWDGDDWRGLGPEAQLAYTDGFLTGAGFAQAAGSGRGMTVDSAGLRDTMAALHRSGRFRFPYGANVYVSRLNDYYWWENHRPLPTWYAFWEVNTSLTGPTTEPAR
Ga0310899_107210401	3300032017	Soil	FLVGRASAGGPERHWSVQDGNDWRTLGPEARQAYADGFLAGAGFGQAAGTASDSAGLRAAMTTLYRDGRFRFPYAANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTTDSAR
Ga0307415_1023215061	3300032126	Rhizosphere	ARWWWAALGALAFLAGRASAGPDRHWSTWDGDDWRGLGPEAQLAYTDGFLTGAGFAQAAGSGRGMAVDSAGLRDTMAALHRSGRFRFPYGANVYVSRLNDYYWWENHRPLPTWYAFWEVNTSLTGPTTEPAR
Ga0310810_100265045	3300033412	Soil	VAGGFLAGRASAGGPERHWSVQDGGDWRTLGPDARLAYADGFLAGAGFGQASSAASDSAGLRETMTTLYRNGRFRFPYGANVYVTRVNDYYWWENHRPLPIWYGFWEVNASLTGPTIDSA
Ga0310810_106267702	3300033412	Soil	VAARWWWAALAAAGVVGGHTSSALEPGRHWSVRDGNDWRALGPEAQAAYTDGFLAGAGFMQAAGPGAGRMTVDSAGLRDTMTALYRSGRFRLPYGANVYVSRLNDYYWWENHRPLPIWYAFWEVNTSLIGPTTEPAR
Ga0316628_1007588381	3300033513	Soil	WRALGPSEQVAYTEGFLTGAAFGQAAQLTCPERCEIGTDSAGLQQTMATFRRNGSFRLPFGANVYVSRVNDYYWWENHRPLPTWYAFWEVNTTLIGPRNDSAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F105960

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences