NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105619

Metagenome Family F105619

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105619
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 41 residues
Representative Sequence LIETLGHPLAPAYYIMLYGAIGLAIMWPMAETNTRALDE
Number of Associated Samples 88
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.00 %
% of genes near scaffold ends (potentially truncated) 95.00 %
% of genes from short scaffolds (< 2000 bps) 91.00 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (73.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(10.000 % of family members)
Environment Ontology (ENVO) Unclassified
(41.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 25.37%    β-sheet: 0.00%    Coil/Unstructured: 74.63%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF03466LysR_substrate 6.00
PF01292Ni_hydr_CYTB 4.00
PF00375SDF 4.00
PF00583Acetyltransf_1 3.00
PF03551PadR 2.00
PF13090PP_kinase_C 2.00
PF00675Peptidase_M16 2.00
PF02574S-methyl_trans 2.00
PF02219MTHFR 2.00
PF00033Cytochrome_B 1.00
PF13418Kelch_4 1.00
PF13847Methyltransf_31 1.00
PF03437BtpA 1.00
PF01564Spermine_synth 1.00
PF08281Sigma70_r4_2 1.00
PF11937DUF3455 1.00
PF07786HGSNAT_cat 1.00
PF135322OG-FeII_Oxy_2 1.00
PF02371Transposase_20 1.00
PF01980TrmO 1.00
PF02954HTH_8 1.00
PF00830Ribosomal_L28 1.00
PF03404Mo-co_dimer 1.00
PF01687Flavokinase 1.00
PF02798GST_N 1.00
PF06964Alpha-L-AF_C 1.00
PF00990GGDEF 1.00
PF09966DUF2200 1.00
PF04893Yip1 1.00
PF12704MacB_PCD 1.00
PF07883Cupin_2 1.00
PF01648ACPS 1.00
PF07927HicA_toxin 1.00
PF04545Sigma70_r4 1.00
PF02867Ribonuc_red_lgC 1.00
PF07366SnoaL 1.00
PF02482Ribosomal_S30AE 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1969Ni,Fe-hydrogenase I cytochrome b subunitEnergy production and conversion [C] 4.00
COG2864Cytochrome b subunit of formate dehydrogenaseEnergy production and conversion [C] 4.00
COG3038Cytochrome b561Energy production and conversion [C] 4.00
COG3658Cytochrome b subunit of Ni2+-dependent hydrogenaseEnergy production and conversion [C] 4.00
COG4117Thiosulfate reductase cytochrome b subunitInorganic ion transport and metabolism [P] 4.00
COG0646Methionine synthase I (cobalamin-dependent), methyltransferase domainAmino acid transport and metabolism [E] 2.00
COG06855,10-methylenetetrahydrofolate reductaseAmino acid transport and metabolism [E] 2.00
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 2.00
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 2.00
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 2.00
COG2040Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)Amino acid transport and metabolism [E] 2.00
COG0196FAD synthaseCoenzyme transport and metabolism [H] 1.00
COG0209Ribonucleotide reductase alpha subunitNucleotide transport and metabolism [F] 1.00
COG0227Ribosomal protein L28Translation, ribosomal structure and biogenesis [J] 1.00
COG0434Membrane biogenesis protein, BtpA/SgcQ familyCell wall/membrane/envelope biogenesis [M] 1.00
COG1290Cytochrome b subunit of the bc complexEnergy production and conversion [C] 1.00
COG1544Ribosome-associated translation inhibitor RaiATranslation, ribosomal structure and biogenesis [J] 1.00
COG1720tRNA (Thr-GGU) A37 N6-methylaseTranslation, ribosomal structure and biogenesis [J] 1.00
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 1.00
COG3503Uncharacterized membrane protein, DUF1624 familyFunction unknown [S] 1.00
COG3534Alpha-L-arabinofuranosidaseCarbohydrate transport and metabolism [G] 1.00
COG3547TransposaseMobilome: prophages, transposons [X] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.00 %
UnclassifiedrootN/A27.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000789|JGI1027J11758_12677649Not Available563Open in IMG/M
3300000955|JGI1027J12803_109589589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales672Open in IMG/M
3300002070|JGI24750J21931_1084146All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300002245|JGIcombinedJ26739_100827931All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium806Open in IMG/M
3300004114|Ga0062593_102459736Not Available589Open in IMG/M
3300004463|Ga0063356_100102101All Organisms → cellular organisms → Bacteria3115Open in IMG/M
3300004643|Ga0062591_100514773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1032Open in IMG/M
3300004808|Ga0062381_10382679Not Available536Open in IMG/M
3300005331|Ga0070670_101052019All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300005332|Ga0066388_103834974All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300005353|Ga0070669_100475190All Organisms → cellular organisms → Bacteria → Proteobacteria1033Open in IMG/M
3300005353|Ga0070669_101433375Not Available600Open in IMG/M
3300005367|Ga0070667_101159446Not Available723Open in IMG/M
3300005466|Ga0070685_11065808All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300005467|Ga0070706_101064209All Organisms → cellular organisms → Bacteria → Proteobacteria745Open in IMG/M
3300005562|Ga0058697_10298677Not Available767Open in IMG/M
3300005563|Ga0068855_102006511All Organisms → cellular organisms → Bacteria → Proteobacteria584Open in IMG/M
3300005833|Ga0074472_10632230All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300005843|Ga0068860_100875347All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005843|Ga0068860_101178786All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300006042|Ga0075368_10282863All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300006175|Ga0070712_101229357All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria652Open in IMG/M
3300006224|Ga0079037_100114186All Organisms → cellular organisms → Bacteria2298Open in IMG/M
3300006845|Ga0075421_100728376All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300006854|Ga0075425_102687958All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300006903|Ga0075426_10045340All Organisms → cellular organisms → Bacteria3142Open in IMG/M
3300006954|Ga0079219_10646514All Organisms → cellular organisms → Bacteria → Proteobacteria788Open in IMG/M
3300009100|Ga0075418_10144833All Organisms → cellular organisms → Bacteria → Proteobacteria2528Open in IMG/M
3300009156|Ga0111538_13915020All Organisms → cellular organisms → Bacteria → FCB group515Open in IMG/M
3300009167|Ga0113563_12646046All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300009551|Ga0105238_12657639All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300009792|Ga0126374_11681118All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella527Open in IMG/M
3300010358|Ga0126370_12280168Not Available535Open in IMG/M
3300010359|Ga0126376_10557635All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → unclassified Thermodesulfobacteriales → Thermodesulfobacteriales bacterium1074Open in IMG/M
3300010360|Ga0126372_12474108All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300010400|Ga0134122_13392145All Organisms → cellular organisms → Bacteria → Proteobacteria501Open in IMG/M
3300012907|Ga0157283_10332522Not Available540Open in IMG/M
3300012948|Ga0126375_10015221All Organisms → cellular organisms → Bacteria → Proteobacteria3417Open in IMG/M
3300012951|Ga0164300_10914901All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium556Open in IMG/M
3300013297|Ga0157378_12969157Not Available526Open in IMG/M
3300013306|Ga0163162_11907855All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300014318|Ga0075351_1153696All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300014968|Ga0157379_10255791All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1590Open in IMG/M
3300015200|Ga0173480_10847617Not Available588Open in IMG/M
3300015264|Ga0137403_10854860Not Available762Open in IMG/M
3300015371|Ga0132258_10601766All Organisms → cellular organisms → Bacteria2760Open in IMG/M
3300015371|Ga0132258_10984470All Organisms → cellular organisms → Bacteria2131Open in IMG/M
3300015371|Ga0132258_13760879Not Available1034Open in IMG/M
3300017792|Ga0163161_10928718All Organisms → cellular organisms → Bacteria → Proteobacteria739Open in IMG/M
3300017965|Ga0190266_11293925Not Available512Open in IMG/M
3300018429|Ga0190272_12357924Not Available575Open in IMG/M
3300018433|Ga0066667_12141890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300020021|Ga0193726_1217586All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300023069|Ga0247751_1056064All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium667Open in IMG/M
3300023072|Ga0247799_1047803All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300024325|Ga0247678_1058381All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium629Open in IMG/M
3300025322|Ga0209641_10804228All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300025327|Ga0209751_11173473Not Available564Open in IMG/M
3300025907|Ga0207645_10889825Not Available605Open in IMG/M
3300025915|Ga0207693_10970188Not Available650Open in IMG/M
3300025923|Ga0207681_10233243All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300025923|Ga0207681_10249837All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1384Open in IMG/M
3300025925|Ga0207650_11421853All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor soli590Open in IMG/M
3300025930|Ga0207701_10430310All Organisms → cellular organisms → Bacteria → Proteobacteria1134Open in IMG/M
3300025981|Ga0207640_10843016All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300026023|Ga0207677_11847608All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales561Open in IMG/M
3300026023|Ga0207677_12117224Not Available523Open in IMG/M
3300026035|Ga0207703_11133504All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300026035|Ga0207703_11591036All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300026088|Ga0207641_11334185All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300026095|Ga0207676_11492550All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300027617|Ga0210002_1008586All Organisms → cellular organisms → Bacteria1556Open in IMG/M
3300027866|Ga0209813_10215631All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300027871|Ga0209397_10276187All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300027871|Ga0209397_10311509All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300028381|Ga0268264_12417744Not Available531Open in IMG/M
3300028809|Ga0247824_10788780All Organisms → cellular organisms → Bacteria → Proteobacteria586Open in IMG/M
3300028889|Ga0247827_10015379All Organisms → cellular organisms → Bacteria3086Open in IMG/M
3300031720|Ga0307469_10191288All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1587Open in IMG/M
3300031740|Ga0307468_101309083All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300031873|Ga0315297_10179638Not Available1734Open in IMG/M
3300032001|Ga0306922_11203321All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium771Open in IMG/M
3300032017|Ga0310899_10196262All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300032173|Ga0315268_10134829All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2339Open in IMG/M
3300032173|Ga0315268_12708987All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21509Open in IMG/M
3300032211|Ga0310896_10691022All Organisms → cellular organisms → Bacteria → Proteobacteria577Open in IMG/M
3300032342|Ga0315286_11635928Not Available612Open in IMG/M
3300032397|Ga0315287_11727725All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfosediminicola → Desulfosediminicola ganghwensis699Open in IMG/M
3300032401|Ga0315275_11050193Not Available893Open in IMG/M
3300033408|Ga0316605_11477479All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300033413|Ga0316603_10200625All Organisms → cellular organisms → Bacteria1697Open in IMG/M
3300033414|Ga0316619_10698510All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae → Opitutus terrae PB90-1856Open in IMG/M
3300033418|Ga0316625_102471528Not Available524Open in IMG/M
3300033418|Ga0316625_102483284Not Available523Open in IMG/M
3300033419|Ga0316601_102012725All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300033488|Ga0316621_10523001All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300033521|Ga0316616_100737795Not Available1186Open in IMG/M
3300033521|Ga0316616_101713653Not Available823Open in IMG/M
3300033521|Ga0316616_102865753All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300034056|Ga0373893_032703Not Available677Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil10.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.00%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland2.00%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil2.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.00%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere2.00%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.00%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.00%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave1.00%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002070Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4Host-AssociatedOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004808Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1FreshEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014318Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rdEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300023069Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5EnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300024325Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19EnvironmentalOpen in IMG/M
3300025322Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027617Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300034056Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.3EngineeredOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J11758_1267764923300000789SoilTAPMVSNWLIETLKQPLAPVFYIIAYGVFGLVVMWPMAETNARRLDQ*
JGI1027J12803_10958958933300000955SoilISAWLIERFGQPLAPAYYVILHGVVGLALLLPMQETNTRSLGE*
JGI24750J21931_108414623300002070Corn, Switchgrass And Miscanthus RhizosphereRLGQPLAPAWYIMLYGVLGLIVMVSMKETNTRALDEVVA*
JGIcombinedJ26739_10082793113300002245Forest SoilETLGQPLAPAYYVMLHGALGLALMWPMQETNSRVLDE*
Ga0062593_10245973613300004114SoilLIERFSQPLAPAYYIMLYGAIGLALMWPMQETNARRLDL*
Ga0063356_10010210113300004463Arabidopsis Thaliana RhizospherePLVSTWLVERFGQPLVPAWYIMLYGLIGLAVIWPMSETNTRRLDQ*
Ga0062591_10051477323300004643SoilVAAWLVDALGKPLAPAYYIMLYGAIGLALMWPMSETNARHLDE*
Ga0062381_1038267923300004808Wetland SedimentLVSSWLIETLGHPLAPAYYIMLYGAIGLLIMWPMRETNTRALDE*
Ga0070670_10105201933300005331Switchgrass RhizosphereLVATWLIERFSQPLAPAYYIMLYGAIGLALMWPMQETNARPLDL*
Ga0066388_10383497413300005332Tropical Forest SoilALAGGTAPMVSNWLIETLKQPFAPVFYIIAYGVFGLVVMWPMAETNARRLDE*
Ga0070669_10047519023300005353Switchgrass RhizosphereAAWLIDTLGEPLAPAYYIMLYGVIGLALLWPMAETNGRRLDQ*
Ga0070669_10143337513300005353Switchgrass RhizosphereVATWLIERFSQPLAPAYYIMLYGAIGLALMWPMQETNARRLDL*
Ga0070667_10115944613300005367Switchgrass RhizospherePLVSAWLIQHFGVPLAPAYYVMLHGAVGLALLWPMQETNTRSLSD*
Ga0070685_1106580813300005466Switchgrass RhizosphereLAGGLAPLVATWLITMFPGVPMLPAYYIMLYGAIGLALMLPMKETNLRSLDE*
Ga0070706_10106420913300005467Corn, Switchgrass And Miscanthus RhizosphereWLIQTLGHPLAPAYYIMLYGAIGLALMWPMAETNARALDT*
Ga0058697_1029867713300005562AgaveVERLDQPLAPAFYIMLHGAIGLALMLPMRETNTRSLGE*
Ga0068855_10200651113300005563Corn RhizosphereVSAWLIEHFGQPLAPAYYVMLHGVIGLALMWPMEETNTRVLNE*
Ga0074472_1063223033300005833Sediment (Intertidal)ETLGHPLAPAYYIMLYGAIGLLIMWPMRETNTRALDE*
Ga0068860_10087534713300005843Switchgrass RhizosphereWLIDTFGQPLAPAYYIMLYGVIGLALMATMKETNARSLDV*
Ga0068860_10117878613300005843Switchgrass RhizosphereWLIKTYANEMLPAYYIMLYGVVGLALLWPMKETNARSLD*
Ga0075368_1028286313300006042Populus EndosphereHEPLAPAYYILLHGLIGLLLMLPMKETNTRSLDE*
Ga0070712_10122935723300006175Corn, Switchgrass And Miscanthus RhizosphereLVSAWLIQHFGVPLAPAYYVMLHGAVGLALLWPMQETNTRSLSD*
Ga0079037_10011418633300006224Freshwater WetlandsTETLGHPLAPAYYIMLYGALGLLIMWPMRETNTRALDE*
Ga0075421_10072837643300006845Populus RhizospherePLVSTWLVERFGQPLVPAWYIMLYGLIGLVIMWPMSETNARRLDE*
Ga0075425_10268795813300006854Populus RhizosphereGHEPAPAYYIMLLGAIGIAVMWRMPETNSRVLDA*
Ga0075426_1004534033300006903Populus RhizosphereLVNSNATVGHPLAPAYYIMVYGAIGLALMWPMTETNNRPLGE*
Ga0079219_1064651423300006954Agricultural SoilGLAPLVATWLIKTYADAMLPAYYIMLYGVVGLALLWPMKETNARSLD*
Ga0075418_1014483313300009100Populus RhizosphereRFGQPLVPAWYIMIYGLIGLFIMWPMSETNTRRLDQ*
Ga0111538_1391502013300009156Populus RhizosphereGQPLVPAWYIMIYGLIGLFIMWPMSETNTRRLDQ*
Ga0113563_1264604613300009167Freshwater WetlandsGHPLAPAYYIMLYGALGLLIMWPMRETNTRALDE*
Ga0105238_1265763913300009551Corn RhizosphereAPLVSGWLIERFQQPLAPAYYIMLYGAIGLAVIWPMQETNTRRLDE*
Ga0126374_1168111823300009792Tropical Forest SoilEKFGAPLAPAWYVMLHGLIGLALLWSMQETNSRTLSD*
Ga0126370_1228016813300010358Tropical Forest SoilQRFALPLAPAYYVMLHGAIGLALLWPMQETNTHNLSE*
Ga0126376_1055763523300010359Tropical Forest SoilLIERFGDALMPAYYIMLYGVVGLVILWPMAETNARTLEA*
Ga0126372_1247410823300010360Tropical Forest SoilQQPLAPAYYIMLYGAIGLAVIWPMQETNARRLGE*
Ga0134122_1339214513300010400Terrestrial SoilDKLHQPLAPAYYIFFYGLLGLAIMWPMKETNSRRLDQ*
Ga0157283_1033252223300012907SoilMKQPLAPAYYVFLYGVLGLAIMWPMKETNTRRLDQ*
Ga0126375_1001522113300012948Tropical Forest SoilFGQPLAPAYYIMVYGVIGLALMAPMEETNERRLDR*
Ga0164300_1091490123300012951SoilFGQPLAPAYYIMLYGAIGLGLMATMKETNARRLDV*
Ga0157378_1296915723300013297Miscanthus RhizosphereSTWLIDCFGDPLMPAYYIMLYGIIGLAMLWPMAETDARSLEA*
Ga0163162_1190785523300013306Switchgrass RhizosphereLQQPLAPAYYIMLYGAIGLAVIWPMQETNTRTLGE*
Ga0075351_115369623300014318Natural And Restored WetlandsMKQPLAPAYYVFLYGFIGLAIMWPMKETNTRRLDQ*
Ga0157379_1025579143300014968Switchgrass RhizosphereLIQHFGVPLAPAYYVMLHGAVGLALLWPMQETNTRSLSD*
Ga0173480_1084761723300015200SoilIDTFGQPLAPAYYIMLYGVIGLALMATMKETNARSLDV*
Ga0137403_1085486023300015264Vadose Zone SoilIQHFGAPLAPAYYVMLHGAIGLALLWPMQETNTHSLSD*
Ga0132258_1060176613300015371Arabidopsis RhizosphereTWLIERFSQPLAPAYYIMLYGAIGLALMWPMQETNANRLDE*
Ga0132258_1098447023300015371Arabidopsis RhizosphereGWLIDTMKQPLAPAYYVFLYGLIGLAIMWPMAETNARRLDQ*
Ga0132258_1376087913300015371Arabidopsis RhizosphereTLALAGGTAPMVSNWLIETLKQPLAPVFYIIAYGVFGLLVMWPMAETNARRLDQ*
Ga0163161_1092871823300017792Switchgrass RhizosphereWLIDTLGEPLAPAWYIMLYGVIGLALLWPMSETNGRRLDQ
Ga0190266_1129392523300017965SoilLIDTMKQPLAPAYYVFLYGALGLAIMWPMKETNTRRLDL
Ga0190272_1235792423300018429SoilLVSTWLVERLGEPLAPAWYIMMYGAIGLALMWPMKETNTHTLDE
Ga0066667_1214189023300018433Grasslands SoilIEKLGHPLAPAYYIMMYGAIGLALMWPMQETNNRPLGD
Ga0193726_121758623300020021SoilSAWLIERFGVLLAPAYYVMLHGAIGLALLWPMQETNTRTLSD
Ga0247751_105606423300023069SoilLIDTMKQPLAPAYYVFLYGLLGLALMWPMKETNSRRLDQ
Ga0247799_104780313300023072SoilLVERFGQPLVPAWYIMIYGLIGLFIMWPMSETNTRRLDQ
Ga0247678_105838113300024325SoilAWLIGKFGVPLAPAYYVMLHGAIGLALLWPMQETNARTLSE
Ga0209641_1080422813300025322SoilAPLVSTWLIETLGHPLAPAYYIMLYGAIGLAIMWPMAETNTRRLDV
Ga0209751_1117347323300025327SoilALAGGTAPTVSKWFIDTLHQPLWPAFYIMAYGVLGLAIMWPMRETNTRPLDR
Ga0207645_1088982513300025907Miscanthus RhizosphereWLIERFQQPLAPAYYIMLYGAIGLAVIWPMQETNTRRLDE
Ga0207693_1097018813300025915Corn, Switchgrass And Miscanthus RhizosphereLVSAWLIQHFGVPLAPAYYVMLHGAVGLALLWPMQETNTRSLSD
Ga0207681_1023324313300025923Switchgrass RhizospherePLVATWLIDTMKQPLAPAYYVFLYGVLGLAIMWPMKETNTRRLDT
Ga0207681_1024983733300025923Switchgrass RhizosphereLVAAWLIDTLGEPLAPAYYIMLYGVIGLALLWPMAETNGRRLDQ
Ga0207650_1142185323300025925Switchgrass RhizosphereTMKQPLAPAYYVFLYGLIGLAIMWPIKETNTRRLDQ
Ga0207701_1043031033300025930Corn, Switchgrass And Miscanthus RhizosphereWLIDTMKQPLAPAYYVFLYGLLGLAIMWPMKETNTRRLDQ
Ga0207640_1084301613300025981Corn RhizosphereLIQHFGVPLAPAYYVMLHGAVGLALLWPMQETNTRSLSD
Ga0207677_1184760813300026023Miscanthus RhizosphereQHFGVPLAPAYYVMLHGAVGLALLWPMQETNTRSLSD
Ga0207677_1211722423300026023Miscanthus RhizosphereLGDSLAPAFYVMLYGVIGAALIWPMKETNTRQLTA
Ga0207703_1113350423300026035Switchgrass RhizosphereSAPFVSTWLIDCFGDPLMPAYYIMLYGIIGLAMLWPMAETNARSLEA
Ga0207703_1159103623300026035Switchgrass RhizosphereWLIETLGQPLAPAHYIVVYGAIGLALMWPMQETNTRPLDR
Ga0207641_1133418513300026088Switchgrass RhizosphereLTLALAGGTAPMVSNWLIETLKQPLAPVFYIIAYGLFGLVVMWPMAETNARRLDQ
Ga0207676_1149255013300026095Switchgrass RhizosphereLIDTLKQPLAPVYYVFLYGLIGLAIMWPMKETNARPLDQ
Ga0210002_100858643300027617Arabidopsis Thaliana RhizosphereAPLVSTWLVERFGQPLVPAWYIMIYGLIGLFIMWPMSETNTRRLDQ
Ga0209813_1021563123300027866Populus EndosphereFHEPLAPAYYILLHGLIGLLLMLPMKETNTRSLDE
Ga0209397_1027618723300027871WetlandTAPLVSSWLIETLGHPLAPAYYIMLYGAVGLLIMWPMRETNTRALDE
Ga0209397_1031150923300027871WetlandWLTETLGHPLAPAYYIMLYGALGLLIMWPMRETNTRALDE
Ga0268264_1241774413300028381Switchgrass RhizosphereIDTFGQPLAPAYYIMLYGVIGLALMATMKETNARSLDV
Ga0247824_1078878013300028809SoilIDTLGEPLAPAYYIMLYGVIGLALLWPMAETNGRRLDQ
Ga0247827_1001537933300028889SoilVAAWLVDALGKPLAPAYYIMLYGAIGLAVMWPMSETNARHLDE
Ga0307469_1019128833300031720Hardwood Forest SoilGTAPRVSNWLIETLKQPLAPVLYIITYGVIGLAIMWPMHETNARRLDE
Ga0307468_10130908323300031740Hardwood Forest SoilVSGWLIERLQQPLAPAYYIMAYGAIGLAVIWPMQETNTRRLGE
Ga0315297_1017963813300031873SedimentETLGHPLAPAYYIMLYGAVGLAIMWPMAETNGRRLDE
Ga0306922_1120332113300032001SoilSAWLIERFAWPLAPAYYVMLHGAIGLALLWPMQETNTQTLSD
Ga0310899_1019626223300032017SoilSAPLVSTWLVERFGQPLVPAWYIMIYGLIGLFIMWPMSETNTRRLDQ
Ga0315268_1013482913300032173SedimentETLGHPLAPAYYIMLYGAIGLAIMWPMRETNTRSLDD
Ga0315268_1270898723300032173SedimentAPLVSAWLIETLGHPLAPAYYIMLYGALGLAIMWPMAETNTRALDT
Ga0310896_1069102223300032211SoilLGEPLAPAYYIMLYGVIGLALLWPMSETNGRRLDQ
Ga0315286_1163592823300032342SedimentPLVSTWLIETLGHPLAPAYYIMLYGAVGLAIMWPMAETNARRLDV
Ga0315287_1172772513300032397SedimentETLGHPLAPAYYIMLYGAIGLLIMWPMRETNTRALDE
Ga0315275_1105019323300032401SedimentTAPMVSKWLIETFGHPLLPAYYIMLYGAIGLAIMWPMAETNTRRLDE
Ga0316605_1147747923300033408SoilAPLVSSWLIETLGHPLAPAYYIMLYGAIGLLIMWPMRETNTRALDE
Ga0316603_1020062523300033413SoilPLVSSWLTETLGHPLAPAYYIMLYGALGLLIMWPMRETNTRALDE
Ga0316619_1069851013300033414SoilSWLIETLGHPLAPAYYIMLFGAIGLLMVWPMRETNTRALDE
Ga0316625_10247152813300033418SoilFGSPMLPAYYVIIYGAIGLAIMWPMQETNTRSLDD
Ga0316625_10248328413300033418SoilTETLGHPLAPAYYIMLYGALGLLIMWPMRETNTRALDE
Ga0316601_10201272513300033419SoilAPLVSSWLIEHFHNPLVPAYYIMAYGIIGLAIMWPMGETNTRSLDR
Ga0316621_1052300113300033488SoilETLGHPLAPAYYIMLYGAIGLVIMWPMRETNTRALDE
Ga0316616_10073779523300033521SoilVETLGHPLAPAYYIMLYGAVGLAIMWPMRETNTRALDE
Ga0316616_10171365323300033521SoilLIETLGHPLAPAYYIMLYGAIGLAIMWPMAETNTRALDE
Ga0316616_10286575313300033521SoilERLGQPLAPAYYIMLHGLIGFCLMLPMKETNLRSLDE
Ga0373893_032703_2_1423300034056Sediment SlurryAPLVSSWLVETLGHPLAPAYYIMLYGAAGLAIMWPMRETNTRALDE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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