Metagenome / Metatranscriptome Family F105291

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F105291
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	67 residues
Representative Sequence	FEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL
Number of Associated Samples	73
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.00 %
% of genes near scaffold ends (potentially truncated)	53.00 %
% of genes from short scaffolds (< 2000 bps)	79.00 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (84.000 % of family members)
Environment Ontology (ENVO)	Unclassified (84.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 11.94% β-sheet: 32.84% Coil/Unstructured: 55.22%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF00669	Flagellin_N	40.00
PF07196	Flagellin_IN	36.00
PF00700	Flagellin_C	16.00
PF06429	Flg_bbr_C	5.00
PF05050	Methyltransf_21	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG1344	Flagellin and related hook-associated protein FlgL	Cell motility [N]	92.00
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	41.00
COG1345	Flagellar capping protein FliD	Cell motility [N]	36.00
COG1558	Flagellar basal body rod protein FlgC	Cell motility [N]	5.00
COG1749	Flagellar hook protein FlgE	Cell motility [N]	5.00
COG4786	Flagellar basal body rod protein FlgG	Cell motility [N]	5.00
COG4787	Flagellar basal body rod protein FlgF	Cell motility [N]	5.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	25.00 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	10.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
SAR116 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	25.00 %
unclassified Cellvibrionales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales	10.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified SAR116 cluster	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster	20.00 %
Cellvibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	10.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
SAR116 cluster alpha proteobacterium HIMB100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	20.00 %
Cellvibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	10.00 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006357\|Ga0075502_1718219	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300006400\|Ga0075503_1705607	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300006401\|Ga0075506_1009441	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300006402\|Ga0075511_1806323	All Organisms → cellular organisms → Bacteria → Proteobacteria	1220	Open in IMG/M
3300006403\|Ga0075514_1935982	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300006403\|Ga0075514_1959280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	979	Open in IMG/M
3300006637\|Ga0075461_10150986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	712	Open in IMG/M
3300006867\|Ga0075476_10211528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	703	Open in IMG/M
3300012524\|Ga0129331_1281062	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300012528\|Ga0129352_10193550	All Organisms → cellular organisms → Bacteria → Proteobacteria	1990	Open in IMG/M
3300012528\|Ga0129352_10308282	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300012528\|Ga0129352_10368630	All Organisms → cellular organisms → Bacteria → Proteobacteria	1220	Open in IMG/M
3300012967\|Ga0129343_1417758	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300012967\|Ga0129343_1452993	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300016689\|Ga0182050_1039145	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300016724\|Ga0182048_1138860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300016724\|Ga0182048_1381458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	2928	Open in IMG/M
3300016726\|Ga0182045_1098582	All Organisms → cellular organisms → Bacteria → Proteobacteria	1544	Open in IMG/M
3300016727\|Ga0182051_1177298	All Organisms → cellular organisms → Bacteria → Proteobacteria	2176	Open in IMG/M
3300016727\|Ga0182051_1297269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1776	Open in IMG/M
3300016732\|Ga0182057_1041186	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300016733\|Ga0182042_1287690	All Organisms → cellular organisms → Bacteria → Proteobacteria	2010	Open in IMG/M
3300016734\|Ga0182092_1161876	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300016736\|Ga0182049_1257663	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300016736\|Ga0182049_1257990	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300016740\|Ga0182096_1417345	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300016741\|Ga0182079_1451366	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300016742\|Ga0182052_1090876	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300016745\|Ga0182093_1297650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	631	Open in IMG/M
3300016749\|Ga0182053_1509320	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300016754\|Ga0182072_1197830	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300016758\|Ga0182070_1234422	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300016758\|Ga0182070_1414879	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300016766\|Ga0182091_1273075	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300016771\|Ga0182082_1225989	All Organisms → cellular organisms → Bacteria → Proteobacteria	902	Open in IMG/M
3300017824\|Ga0181552_10035672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3006	Open in IMG/M
3300017824\|Ga0181552_10067362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	2054	Open in IMG/M
3300017824\|Ga0181552_10138879	All Organisms → cellular organisms → Bacteria → Proteobacteria	1306	Open in IMG/M
3300017824\|Ga0181552_10524798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	556	Open in IMG/M
3300017950\|Ga0181607_10072689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	2245	Open in IMG/M
3300017952\|Ga0181583_10148223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	1571	Open in IMG/M
3300017956\|Ga0181580_10026805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4478	Open in IMG/M
3300017956\|Ga0181580_10100708	All Organisms → cellular organisms → Bacteria → Proteobacteria	2116	Open in IMG/M
3300017962\|Ga0181581_10207357	All Organisms → cellular organisms → Bacteria → Proteobacteria	1293	Open in IMG/M
3300017964\|Ga0181589_10013868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6338	Open in IMG/M
3300017968\|Ga0181587_10033150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	3904	Open in IMG/M
3300017968\|Ga0181587_10190538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	1425	Open in IMG/M
3300017985\|Ga0181576_10062647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	2523	Open in IMG/M
3300018036\|Ga0181600_10080749	All Organisms → cellular organisms → Bacteria → Proteobacteria	1972	Open in IMG/M
3300018036\|Ga0181600_10311426	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300018036\|Ga0181600_10391662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	676	Open in IMG/M
3300018036\|Ga0181600_10396392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	671	Open in IMG/M
3300018039\|Ga0181579_10135690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	1502	Open in IMG/M
3300018041\|Ga0181601_10144212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	1468	Open in IMG/M
3300018041\|Ga0181601_10395955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	739	Open in IMG/M
3300018410\|Ga0181561_10325966	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300018410\|Ga0181561_10365002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	661	Open in IMG/M
3300018410\|Ga0181561_10461621	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300018410\|Ga0181561_10570404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	503	Open in IMG/M
3300018413\|Ga0181560_10585431	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300018415\|Ga0181559_10664405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	560	Open in IMG/M
3300018416\|Ga0181553_10061123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2451	Open in IMG/M
3300018416\|Ga0181553_10084606	All Organisms → cellular organisms → Bacteria → Proteobacteria	1994	Open in IMG/M
3300018416\|Ga0181553_10141978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	1438	Open in IMG/M
3300018417\|Ga0181558_10156531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	1347	Open in IMG/M
3300018418\|Ga0181567_10388682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	926	Open in IMG/M
3300018420\|Ga0181563_10145701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	1495	Open in IMG/M
3300018424\|Ga0181591_10988439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	572	Open in IMG/M
3300018428\|Ga0181568_10182697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	1742	Open in IMG/M
3300019261\|Ga0182097_1159699	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300019274\|Ga0182073_1157956	All Organisms → cellular organisms → Bacteria → Proteobacteria	1599	Open in IMG/M
3300019280\|Ga0182068_1039591	All Organisms → cellular organisms → Bacteria → Proteobacteria	1994	Open in IMG/M
3300019280\|Ga0182068_1268786	All Organisms → cellular organisms → Bacteria → Proteobacteria	1627	Open in IMG/M
3300019281\|Ga0182077_1416817	All Organisms → cellular organisms → Bacteria → Proteobacteria	1409	Open in IMG/M
3300019282\|Ga0182075_1642441	All Organisms → cellular organisms → Bacteria → Proteobacteria	1987	Open in IMG/M
3300019283\|Ga0182058_1170592	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300020053\|Ga0181595_10036157	All Organisms → cellular organisms → Bacteria → Proteobacteria	2895	Open in IMG/M
3300020053\|Ga0181595_10391706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	541	Open in IMG/M
3300020189\|Ga0181578_10205266	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300020194\|Ga0181597_10340937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	652	Open in IMG/M
3300020207\|Ga0181570_10008719	All Organisms → cellular organisms → Bacteria	6870	Open in IMG/M
3300020810\|Ga0181598_1011743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5891	Open in IMG/M
3300021371\|Ga0213863_10023511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	3503	Open in IMG/M
3300021371\|Ga0213863_10186172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	922	Open in IMG/M
3300022900\|Ga0255771_1232271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	655	Open in IMG/M
3300022905\|Ga0255756_1026239	All Organisms → cellular organisms → Bacteria → Proteobacteria	3893	Open in IMG/M
3300022922\|Ga0255779_1048943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	2690	Open in IMG/M
3300022922\|Ga0255779_1097542	All Organisms → cellular organisms → Bacteria → Proteobacteria	1571	Open in IMG/M
3300022926\|Ga0255753_1057165	All Organisms → cellular organisms → Bacteria → Proteobacteria	2172	Open in IMG/M
3300022928\|Ga0255758_10192417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	957	Open in IMG/M
3300022929\|Ga0255752_10038846	All Organisms → cellular organisms → Bacteria → Proteobacteria	3128	Open in IMG/M
3300023081\|Ga0255764_10163274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	1141	Open in IMG/M
3300023084\|Ga0255778_10245295	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300023084\|Ga0255778_10338991	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300023108\|Ga0255784_10448184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	602	Open in IMG/M
3300023116\|Ga0255751_10315772	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300023173\|Ga0255776_10239138	All Organisms → cellular organisms → Bacteria → Proteobacteria	1077	Open in IMG/M
3300023178\|Ga0255759_10472798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	742	Open in IMG/M
3300023273\|Ga0255763_1070525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1687	Open in IMG/M
3300023709\|Ga0232122_1011821	All Organisms → cellular organisms → Bacteria → Proteobacteria	2360	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	84.00%
Coastal	Environmental → Aquatic → Marine → Coastal	16.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	84.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	84.00%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	14.00%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006357	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006400	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006401	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006402	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006403	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012528	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012967	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016689	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011509AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016724	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016726	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011504BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016727	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011510BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016732	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101403AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016733	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011501AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016734	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041410CS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016736	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011508BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016740	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413YT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016741	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071410CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016742	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011511BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016745	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016754	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016758	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071403BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016766	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016771	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019261	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413BS (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019274	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019280	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071401AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019281	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019282	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071407BT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019283	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300022900	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG	Environmental	Open in IMG/M
3300022905	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG	Environmental	Open in IMG/M
3300022922	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023084	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300023709	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075502_17182192	3300006357	Aqueous	FEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL*
Ga0075503_17056072	3300006400	Aqueous	IEMTETCKQMVHSGGAVRMAVMQWGSLSTAVLTNDLTSNISINKTWHANCRKPDVSKILDWLVL*
Ga0075506_10094412	3300006401	Aqueous	VIEMTETRKQLVHSGGAVGMAVMPWGPFSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL*
Ga0075511_18063231	3300006402	Aqueous	TETCKQMVHSGGAVRMAVMPWGSPSTAVLTNDLTSNISINKTWHANCRKPDVSKILDWLVL*
Ga0075514_19359822	3300006403	Aqueous	IEMTETRKQLVHSGGAVGMAVTPWGSPSTAVLPNDLTSNIIINKTWHANCRQMDVSKFLDWLV*
Ga0075514_19592801	3300006403	Aqueous	VHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL*
Ga0075461_101509862	3300006637	Aqueous	MTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDVTSNITINKTWHENCRKSDVSKILDWLVL*
Ga0075476_102115282	3300006867	Aqueous	MTETRKQLVHSGGAVDMAVMPWGSPSTTVLANDLTSNITINKTWHANCRKPDVSKILDWLVL*
Ga0129331_12810622	3300012524	Aqueous	IEMTEMCKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCKKPDVSKILDWLVL*
Ga0129352_101935501	3300012528	Aqueous	IEMTETCKQMVHSSAAVRMAVMPWGSRSTAVLTNDLTSNISINKTWHADCRTSAVSKILDWLVK*
Ga0129352_103082821	3300012528	Aqueous	MTETRKQLVHSSGAVDMAVMPWGSPSTTVLANDLTSNITINKTWHANCRKPDVSKILDWLVL*
Ga0129352_103686302	3300012528	Aqueous	FEVIEMTETREQLVNSGGAVAVSVMPWGSPSTMLLTNDLMSEITFNKTWHINCRENNVSKILDWLV*
Ga0129343_14177581	3300012967	Aqueous	MTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL*
Ga0129343_14529932	3300012967	Aqueous	ECQTFEVIEMTETCKQMVHSSAAVRMAVMPWGSPSTAVLTNDLTSNISINKTWHANCRKPDVSKILDWLVL*
Ga0182050_10391452	3300016689	Salt Marsh	FEVIEMTETCKQMVHSSAAVRMAVMPWGSRSTAVLTNDLTSNISINKTWHENCKKPDVSKILDWLVL
Ga0182048_11388602	3300016724	Salt Marsh	VHSGGAVGMAVMPWGSSSTAVLTNDLTSNIIIKTWHANCRKPDVSKFLDWLV
Ga0182048_13814582	3300016724	Salt Marsh	LLAYGECQTFEVIEMTETRKQLVHSGGAVDMAVTLWGSPSTTVLANDLTSNITINKTWHANCRKPDVSKILDWLVL
Ga0182045_10985821	3300016726	Salt Marsh	IEMTETRKQLVHSGGAVGMAVTPWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0182051_11772982	3300016727	Salt Marsh	FEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTTVLTNDLTSNITINKTWHANCRKPDVSKILDWLVL
Ga0182051_12972691	3300016727	Salt Marsh	FEVIEMTETRKQLVHSGGAVDMAVTLWGSPSTTVLANDLPSNITINKTWHANCRKPDVSKFLDWLV
Ga0182057_10411862	3300016732	Salt Marsh	VIEMTETRKQLVHSGGAVGMAVMPWRSYSTAVLTHDLTSNITINKTWHANCRKPDVSKILDWLV
Ga0182042_12876902	3300016733	Salt Marsh	FEVIEMTETCKQMVHSGGAVRMAVMPWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0182092_11618761	3300016734	Salt Marsh	IEMAELRKQMVHSGGAAGLTVMPWGSPSITVLTNDLMSNVTINKTWHANCRKPDVSKILDWLVL
Ga0182049_12576632	3300016736	Salt Marsh	VIEMTETRKQLVHSGGAVGMAVMPWRSYSTAVLTHDLTSNITINKTWHANCRKLDVSKILDWLV
Ga0182049_12579901	3300016736	Salt Marsh	QTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0182096_14173452	3300016740	Salt Marsh	FEVIEMTETCKQMVHSSAAVRMAVMPWGSRSTAVLTNDLTSNISINKTWHANCRNRDVSKILDWLVL
Ga0182079_14513662	3300016741	Salt Marsh	FEVIEMTETRKQVVYSGGAVGMAVMPWGAASTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0182052_10908761	3300016742	Salt Marsh	QTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL
Ga0182093_12976501	3300016745	Salt Marsh	MTETRKQMVHSGGAVGMAVMPWGSSSTTVLTNDLTSNVTLNKTWHANCRKPDVSKILDWL
Ga0182053_15093201	3300016749	Salt Marsh	LLACGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0182072_11978302	3300016754	Salt Marsh	EMTETRKQLVHSGGAVGMTVTLWGSPSTAVLTNDLTSNISINKTWHENCRKSDVSKILDWLVL
Ga0182070_12344221	3300016758	Salt Marsh	IEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0182070_14148792	3300016758	Salt Marsh	FEVIEMTETCKQMVHSSGAVRMAVMPWGSPSTAVLTNDLTSYISINKTWHANCRKPDVSKILDWLVL
Ga0182091_12730752	3300016766	Salt Marsh	FEVIEMAELRKQMVHSGGAAGLTVMPWGSPSITVLTNDLMSNVTINKTWHANCRKPDVSKILDWLVL
Ga0182082_12259892	3300016771	Salt Marsh	FEVIEMTETCKQMVHSGGAVRMAVMPWGSPSTAVLTNDLTSYISINKTWHANCRKPDVSKILDWLVL
Ga0181552_100356722	3300017824	Salt Marsh	MTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0181552_100673622	3300017824	Salt Marsh	LLEEWECQTFEVIEMTETRKQLVHSGGAVGMAVTPWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0181552_101388792	3300017824	Salt Marsh	MRERQIFEVIEMTETRKQIVHSGGAAGLTVMPCGLPSMTVLTNDLPSNVTINKTWHANCRELDVSKILDWLVL
Ga0181552_105247982	3300017824	Salt Marsh	LLDKGECQTFEVIEMTETRKQLVHSGGAVDMAVTLWGSPSTTVLANDLTSNITINKTWHANCRKPDVSKILDWLVL
Ga0181607_100726892	3300017950	Salt Marsh	LLDYGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0181583_101482232	3300017952	Salt Marsh	LLEEWECQTFEVIEMTETRKQLVHRGGAVGMAVTPWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0181580_100268052	3300017956	Salt Marsh	MTETRKQLVHSGGAVGMAVMPWGSSSTTVLTNDLTSNITINKTWHANCRKTDVSKILDWLVL
Ga0181580_101007081	3300017956	Salt Marsh	QMVHSNAAVRMAVMPWGSRSTAVLTNDLTSNISINKTWHANCRNPDVSKILDWLVL
Ga0181581_102073572	3300017962	Salt Marsh	LVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCKKPDVSKILDWLVL
Ga0181589_100138683	3300017964	Salt Marsh	MTETRKQLVHSGGAVGMAVMPWGSSSTTVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0181587_100331501	3300017968	Salt Marsh	MTETRKQLVHSGGTVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL
Ga0181587_101905382	3300017968	Salt Marsh	LLDKGECQTFEVIEMTETRKQLVHSGGAVGMAVTLWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0181576_100626473	3300017985	Salt Marsh	MTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHANCRKTDVSKILDWLVL
Ga0181600_100807492	3300018036	Salt Marsh	VRERQTFEVIEMAEPRKQMVHSGGAAGLTVMPWGSPSITVLTNDLMSNVTINKTWHANCRKPDVSKILDWLVL
Ga0181600_103114262	3300018036	Salt Marsh	VIEMTETRKQLVHSGGAVGMTVTLWGSPSTAVLTNDLTSNIIIKTWHANCRKPDVSKFLDWLV
Ga0181600_103916622	3300018036	Salt Marsh	LLAYGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL
Ga0181600_103963922	3300018036	Salt Marsh	LLDARERQTFEVIEMTETRKQMVHSGGAAGLTVMPWGSPSMTVLTNDLPSNVTINKTWHANCRKPDVSKILDWLVL
Ga0181579_101356902	3300018039	Salt Marsh	LLAYGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTTVLTNDLTSNITINKTWHANCRKPDVSKILDWLVL
Ga0181601_101442122	3300018041	Salt Marsh	LLAYGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0181601_103959552	3300018041	Salt Marsh	LLDARERQTFEVIEMSETRKQMVHSGGAAGLTVMPWGSPSMTVLTNDLPSNVTINKTWHANCRKPDVSKILDWLVL
Ga0181561_103259661	3300018410	Salt Marsh	EMTETRKQMVHSGGAAGLTVMPWGSPSITLLTNDLMSNVTINKTWHANCRKPDVSKILDWLVL
Ga0181561_103650022	3300018410	Salt Marsh	LLAYGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCKKSDVSKILDWLVL
Ga0181561_104616212	3300018410	Salt Marsh	MTETRKQLVHSGGAVGMAVMPWRSYSTAVLTHDLTSNITINKTWHANCRKLDVSKILDWL
Ga0181561_105704042	3300018410	Salt Marsh	LLDYGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL
Ga0181560_105854312	3300018413	Salt Marsh	FEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL
Ga0181559_106644052	3300018415	Salt Marsh	LLDYGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWRSYSTAVLTHDLTSNITINKTWHANCRKLDVSKILDWLV
Ga0181553_100611232	3300018416	Salt Marsh	LLDARERQTFEVIEMTETRKQMVHSGGAAGLTVMPWASPSMTVLTNDLPSNVTINKTWHANCRELDVSKILDWLVL
Ga0181553_100846062	3300018416	Salt Marsh	LLDKGECQTFEVIEMTETRKQLVHSGSAVDMAVMPWGSPSTTVLANDLTSNITINKTWHANCRKPDVSKILDWLVL
Ga0181553_101419781	3300018416	Salt Marsh	LLEEWECQTFEVIEMTETRKQLVHSGGAVRMAVVPWGSPSTVVLTNDLTSNISINKTWHANCKKPDVSKIL
Ga0181558_101565312	3300018417	Salt Marsh	LLNARERQTFEVIEMTETRKQMVHSGGAAGLTVMPWASPSMTVLTNDLPFNVTINKTWHANCRKPDVSKILDWLVL
Ga0181567_103886822	3300018418	Salt Marsh	MTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKFLDWL
Ga0181563_101457012	3300018420	Salt Marsh	LLEEWECQTFEVIEMTETRKQLVHSGGAVGMTVTLWGSPSTAVLTNDLTSNIIIKTWHANCRKPDVSKILDWLVL
Ga0181591_109884392	3300018424	Salt Marsh	LLVEGECQTFEVIEMTETCKQMVHSGGAVRMAVMPWGSPSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL
Ga0181568_101826971	3300018428	Salt Marsh	LLDYGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTFNITINKTWHENCKKPDVSKILDWLVL
Ga0182097_11596992	3300019261	Salt Marsh	ECQIFEVIEMTETRKQLVHSGGAVGMAVMPWRSYSTAVLTHDLTSNITINKTWHANCRKPDVSKILDWLV
Ga0182073_11579562	3300019274	Salt Marsh	VIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0182068_10395912	3300019280	Salt Marsh	FEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0182068_12687861	3300019280	Salt Marsh	FEVIEMTETRKQLVHSGGAVGMAVTPWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0182077_14168171	3300019281	Salt Marsh	FEVIEMTETCKQMVHSGGAVRMAVMPWGSTSTAVLTNDLTSNISINKTWHANCRNRDVSKILDWLVL
Ga0182075_16424412	3300019282	Salt Marsh	GECQTFEVIEMTETRKQLVHSGGAVGMAVTPWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0182058_11705921	3300019283	Salt Marsh	MTETRKQLVHSGGAVGMAVMPWRSYSTAVLTHDLTSNITINKTWHANCRKPDVSKILDWL
Ga0181595_100361573	3300020053	Salt Marsh	VRERQTFEVIEMAELRKQMVHSGGAAGLTVMPWGSPSITLLTNDLMSNVTINKTWHANCRKPDVSKILDWLVL
Ga0181595_103917061	3300020053	Salt Marsh	MRERQIFEVIEMTETRKQIVHSGGAAGLTVMPCGLPSMTVLTNDLPFNVTINKTWHANCRKPDVSKILDWL
Ga0181578_102052662	3300020189	Salt Marsh	EVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0181597_103409371	3300020194	Salt Marsh	LLDARERQTFEVIEMTETRKQMVHSGSAAGLTVMPWGSHSMTVLTNDLPSNVTINKTWHANCRKPD
Ga0181570_100087191	3300020207	Salt Marsh	MTETCKQMVHSSAAVRMAVMPWGSPSTAVLTNDLTSNISINKTWHANCRKPDVSKILDWLVL
Ga0181598_10117433	3300020810	Salt Marsh	MTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL
Ga0213863_100235111	3300021371	Seawater	MTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKTDVSKILDWLVL
Ga0213863_101861722	3300021371	Seawater	LLDEGERQTFEVIEMTEMCKQLVHSGGAVGMAVMPWGSSSTTVMTNDLTSNITINKTWHANCKKTDVSKILDWLVL
Ga0255771_12322712	3300022900	Salt Marsh	MTETRKQLVHSGGAVDMAVTLWGSPSTTVLANDLTSNITINKTWHANCRKPDVSKILDWLVL
Ga0255756_10262393	3300022905	Salt Marsh	MTETRKQLVHSGGAVGMAVTPWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWL
Ga0255779_10489432	3300022922	Salt Marsh	MTETRKQLVHSGSAVDMAVMPWGSPSTTVLANDLTSNITINKTWHANCRKPDVSKILDWLVL
Ga0255779_10975422	3300022922	Salt Marsh	VIEMTETRKQLVHSGGAVGMAVTPWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0255753_10571651	3300022926	Salt Marsh	VEGECQTFEVIEMTETCKQMVHSGGAVRMAVMPWGSPSTAVLTNDLTSNISINKTWHANCRKPDVSKILDWLVL
Ga0255758_101924172	3300022928	Salt Marsh	LLDKGECQTFEVIEMTETRKQLVHSGGAVDMAVMPWGSPSTTVLANDLTSNITINKTWHANCRKPDVSKILDWLVL
Ga0255752_100388463	3300022929	Salt Marsh	MTETRKQMVHSGGAAGLTVMPWGSPSMTVLTNDLPSNVTINKTWHANCRKPDVSKILDWLVL
Ga0255764_101632742	3300023081	Salt Marsh	LKGERQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKPDVSKILDWLVL
Ga0255778_102452951	3300023084	Salt Marsh	ETRKQLVHSGGAVGMAVTPWGSPSTAVLTNDLTSNIIINKTWHANCRKPDVSKFLDWLV
Ga0255778_103389912	3300023084	Salt Marsh	SECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCRKSDVSKILDWLVL
Ga0255784_104481841	3300023108	Salt Marsh	MTETRKQLVHSGGAVGMAVMPWRSYSTAVLTHDLTSNITINKTWHANCRKPDVSKILD
Ga0255751_103157721	3300023116	Salt Marsh	TFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSYISINKTWHANCRKPDVSKILDWLVL
Ga0255776_102391382	3300023173	Salt Marsh	LLEEWECQTFEVIEMTETRKQLVHSGGAVGMAVTLWGSPSTAVLTNDLTSNIIIKTWHANCRKPDVSKFLDWLV
Ga0255759_104727982	3300023178	Salt Marsh	LLDYGECQTFEVIEMTETRKQLVHSGGAVGMAVMPWGSSSTAVLTNDLTSNITINKTWHENCMKPDVSKILDWLVL
Ga0255763_10705252	3300023273	Salt Marsh	LLNARERQTFEVIEMTETRKQMVHSGGAAGLTVMPWGSPSMTVLTNDLPSNVTINKTWHANCRKPDVSKILDWLVL
Ga0232122_10118213	3300023709	Salt Marsh	QTFEVIEMTETRKQMVHSGGAAGLTVVPWGSPSMTVLTNDLPSNVTINKTWHANCRKTDVSKILDWLVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F105291

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences