NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105018

Metagenome / Metatranscriptome Family F105018

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105018
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 59 residues
Representative Sequence MNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKVA
Number of Associated Samples 76
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 13.00 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 73.00 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (64.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(48.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(59.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 77.97%    β-sheet: 0.00%    Coil/Unstructured: 22.03%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01391Collagen 3.00
PF13385Laminin_G_3 3.00
PF12850Metallophos_2 2.00
PF07728AAA_5 2.00
PF13692Glyco_trans_1_4 1.00
PF02511Thy1 1.00
PF01555N6_N4_Mtase 1.00
PF13895Ig_2 1.00
PF00534Glycos_transf_1 1.00
PF13229Beta_helix 1.00
PF09718Tape_meas_lam_C 1.00
PF07679I-set 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0863DNA modification methylaseReplication, recombination and repair [L] 1.00
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 1.00
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 1.00
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A64.00 %
All OrganismsrootAll Organisms36.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002835|B570J40625_100034066All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.BinA0287858Open in IMG/M
3300004481|Ga0069718_14806508Not Available936Open in IMG/M
3300004795|Ga0007756_11594185Not Available591Open in IMG/M
3300005528|Ga0068872_10753016Not Available509Open in IMG/M
3300005581|Ga0049081_10039070All Organisms → cellular organisms → Bacteria → Proteobacteria1803Open in IMG/M
3300005582|Ga0049080_10003257Not Available5630Open in IMG/M
3300005582|Ga0049080_10067513Not Available1227Open in IMG/M
3300005582|Ga0049080_10182731Not Available696Open in IMG/M
3300005662|Ga0078894_10026352All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae4752Open in IMG/M
3300005662|Ga0078894_10031865Not Available4350Open in IMG/M
3300005662|Ga0078894_10321203Not Available1403Open in IMG/M
3300005662|Ga0078894_11543686Not Available550Open in IMG/M
3300005805|Ga0079957_1003691Not Available12962Open in IMG/M
3300005805|Ga0079957_1031289Not Available3518Open in IMG/M
3300005805|Ga0079957_1140966All Organisms → Viruses → Predicted Viral1241Open in IMG/M
3300006030|Ga0075470_10009269All Organisms → Viruses → Predicted Viral3030Open in IMG/M
3300006641|Ga0075471_10285386All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium842Open in IMG/M
3300006641|Ga0075471_10432744Not Available657Open in IMG/M
3300006802|Ga0070749_10538110Not Available634Open in IMG/M
3300006805|Ga0075464_10223137All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1123Open in IMG/M
3300006810|Ga0070754_10134553All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1193Open in IMG/M
3300006875|Ga0075473_10066938Not Available1401Open in IMG/M
3300006917|Ga0075472_10096154All Organisms → cellular organisms → Bacteria → Proteobacteria1438Open in IMG/M
3300007169|Ga0102976_1115312All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1577Open in IMG/M
3300007234|Ga0075460_10063779All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1365Open in IMG/M
3300007363|Ga0075458_10103811Not Available885Open in IMG/M
3300007538|Ga0099851_1169373Not Available806Open in IMG/M
3300007541|Ga0099848_1201991Not Available713Open in IMG/M
3300008113|Ga0114346_1012094All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4871Open in IMG/M
3300008116|Ga0114350_1070606All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1193Open in IMG/M
3300008116|Ga0114350_1178121Not Available550Open in IMG/M
3300008120|Ga0114355_1106030All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1093Open in IMG/M
3300008266|Ga0114363_1067096Not Available1375Open in IMG/M
3300008448|Ga0114876_1013716All Organisms → Viruses → Predicted Viral4475Open in IMG/M
3300008450|Ga0114880_1238888Not Available576Open in IMG/M
3300009165|Ga0105102_10133105All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1197Open in IMG/M
3300009168|Ga0105104_10219262All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1035Open in IMG/M
3300010354|Ga0129333_10964182Not Available718Open in IMG/M
3300010354|Ga0129333_11394883Not Available576Open in IMG/M
3300011984|Ga0119931_1015443All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage855Open in IMG/M
3300012017|Ga0153801_1000845Not Available6812Open in IMG/M
3300013372|Ga0177922_10285138Not Available565Open in IMG/M
3300013372|Ga0177922_11342481Not Available1598Open in IMG/M
3300017747|Ga0181352_1000811All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage12747Open in IMG/M
3300017747|Ga0181352_1160072Not Available592Open in IMG/M
3300017754|Ga0181344_1072311Not Available1016Open in IMG/M
3300017766|Ga0181343_1019110All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2130Open in IMG/M
3300017766|Ga0181343_1211326Not Available530Open in IMG/M
3300017780|Ga0181346_1049578All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Aokuangvirus → Aokuangvirus SCBWM11702Open in IMG/M
3300017785|Ga0181355_1000574Not Available15711Open in IMG/M
3300017785|Ga0181355_1129789All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1027Open in IMG/M
3300017785|Ga0181355_1375500Not Available518Open in IMG/M
3300019784|Ga0181359_1048010Not Available1649Open in IMG/M
3300019784|Ga0181359_1059157Not Available1469Open in IMG/M
3300020048|Ga0207193_1094417All Organisms → Viruses → Predicted Viral2761Open in IMG/M
3300020183|Ga0194115_10464378Not Available526Open in IMG/M
3300020196|Ga0194124_10109024All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Rubinisphaera → Rubinisphaera brasiliensis → Rubinisphaera brasiliensis DSM 53051558Open in IMG/M
3300020204|Ga0194116_10046035All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Rubinisphaera → Rubinisphaera brasiliensis → Rubinisphaera brasiliensis DSM 53053153Open in IMG/M
3300020498|Ga0208050_1022451Not Available649Open in IMG/M
3300020513|Ga0208090_1007959Not Available1758Open in IMG/M
3300020536|Ga0207939_1029267Not Available728Open in IMG/M
3300020557|Ga0208231_1015299All Organisms → Viruses → Predicted Viral1358Open in IMG/M
3300021962|Ga0222713_10747255Not Available552Open in IMG/M
3300021963|Ga0222712_10662017Not Available594Open in IMG/M
3300022179|Ga0181353_1118973Not Available633Open in IMG/M
3300022200|Ga0196901_1217186Not Available607Open in IMG/M
3300022407|Ga0181351_1001950All Organisms → cellular organisms → Bacteria6979Open in IMG/M
3300022407|Ga0181351_1204232Not Available657Open in IMG/M
3300024298|Ga0255178_1000999Not Available6555Open in IMG/M
3300024298|Ga0255178_1066624Not Available683Open in IMG/M
3300024356|Ga0255169_1000230Not Available27459Open in IMG/M
3300024356|Ga0255169_1000517Not Available14580Open in IMG/M
3300024357|Ga0255165_1004211Not Available3058Open in IMG/M
3300024502|Ga0255181_1011904Not Available1828Open in IMG/M
3300024541|Ga0256343_1098068Not Available511Open in IMG/M
3300024548|Ga0256342_1035228All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300024573|Ga0256337_1116481Not Available666Open in IMG/M
3300025585|Ga0208546_1099016Not Available654Open in IMG/M
3300027608|Ga0208974_1038210Not Available1420Open in IMG/M
3300027608|Ga0208974_1119894Not Available688Open in IMG/M
3300028091|Ga0255184_1018992All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1470Open in IMG/M
3300028530|Ga0255279_1069263Not Available601Open in IMG/M
3300031758|Ga0315907_10538560Not Available917Open in IMG/M
3300031758|Ga0315907_10681276All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Aokuangvirus → Aokuangvirus SCBWM1785Open in IMG/M
3300031758|Ga0315907_10909891Not Available645Open in IMG/M
3300031784|Ga0315899_10000610Not Available42694Open in IMG/M
3300031857|Ga0315909_10746018Not Available628Open in IMG/M
3300031951|Ga0315904_10108293All Organisms → Viruses → Predicted Viral2904Open in IMG/M
3300031951|Ga0315904_10688762Not Available862Open in IMG/M
3300032050|Ga0315906_10169570Not Available2088Open in IMG/M
3300032093|Ga0315902_10806079All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage741Open in IMG/M
3300033521|Ga0316616_101715560Not Available823Open in IMG/M
3300033981|Ga0334982_0536196Not Available513Open in IMG/M
3300033995|Ga0335003_0433197Not Available556Open in IMG/M
3300034012|Ga0334986_0028484All Organisms → Viruses → Predicted Viral3712Open in IMG/M
3300034018|Ga0334985_0651290Not Available578Open in IMG/M
3300034071|Ga0335028_0019769All Organisms → Viruses → Predicted Viral4695Open in IMG/M
3300034092|Ga0335010_0038089All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3574Open in IMG/M
3300034104|Ga0335031_0042853All Organisms → Viruses → Predicted Viral3275Open in IMG/M
3300034104|Ga0335031_0431897Not Available819Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake20.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous14.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater11.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater9.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater8.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic6.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton5.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater3.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.00%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake3.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater2.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.00%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment1.00%
Drinking Water Treatment PlantEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300004795Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005528Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006917Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300007169Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300011984Freshwater microbial communities from drinking water treatment plant - The University of Hong Kong - Raw_water_201107EnvironmentalOpen in IMG/M
3300012017Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020196Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0mEnvironmentalOpen in IMG/M
3300020204Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surfaceEnvironmentalOpen in IMG/M
3300020498Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020513Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020536Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020557Freshwater microbial communities from Lake Mendota, WI - 15JUN2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300024298Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepC_8dEnvironmentalOpen in IMG/M
3300024356Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8dEnvironmentalOpen in IMG/M
3300024357Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8dEnvironmentalOpen in IMG/M
3300024502Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8dEnvironmentalOpen in IMG/M
3300024541Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024548Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024573Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025585Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300028091Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_0hEnvironmentalOpen in IMG/M
3300028530Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300033995Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034018Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034092Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069EnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
B570J40625_100034066113300002835FreshwaterVAMNPSLIASIVRHLLGIGSGWLLAKGIDLDAGTVETIAGAIGSLVAVGWSIWSKRVIVPTASEKA*
Ga0069718_1480650823300004481SedimentMNASVISSIVRHLLGIAGGWLLAKGISLDAGTVETIAGSVGSLLAVGWSLYAKRGSATPSA*
Ga0007756_1159418533300004795Freshwater LakeMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAE
Ga0068872_1075301613300005528Freshwater LakeMNSSVLSSVVRHALGIASGWLLAKGIELDAGTIEIIAGALGSLGAVGWSLWSKRAAKVA*
Ga0049081_1003907073300005581Freshwater LenticMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKTP*
Ga0049080_1000325743300005582Freshwater LenticMNASVFTSIVRHLLGIGSGWLLAKGIELDSGTVETVAGSIGSLLAVGWSLWSKRAEKTP*
Ga0049080_1006751323300005582Freshwater LenticMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKVA*
Ga0049080_1018273113300005582Freshwater LenticMNASVFTSIVRHLLGITSGWLLAKGIELDSGTVETIAGSIGSLLAVGWSLWSKRAEKVA*
Ga0078894_1002635223300005662Freshwater LakeMNSTTITAIVRHLLGIASGYLIAKGVELDAATIEIVAGAVGSLLAVGWSLWAKRAPKE*
Ga0078894_1003186573300005662Freshwater LakeMNPSLIASIVRHLLGIGSGWLLAKGIDLDAGTVETIAGAIGSLVAVGWSIWSKRVIVPTASEKA*
Ga0078894_1032120343300005662Freshwater LakeMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRVEKTP*
Ga0078894_1154368613300005662Freshwater LakeMNSSIISSVVRHALGIASGWLLAKGIELDAGTIEIIAGALGSLGAVGWSLWSKRAAKVA*
Ga0079957_1003691183300005805LakeMNATVITSIVRHLLGIGSGWLLAKGIELDSGTVETVAGSIGSLLAVGWSLWSKRVEKTP*
Ga0079957_103128963300005805LakeMNPSIISSIVRHLLGIGSGWLLAKGIDLDAGTVETIAGAIGSLVAVGWSIWSKRVTVPAAPEKA*
Ga0079957_114096623300005805LakeMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRADKVA*
Ga0075470_1000926923300006030AqueousMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKKADKVA*
Ga0075471_1028538643300006641AqueousMNASVIASIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAYKVA*
Ga0075471_1043274433300006641AqueousMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRVEKTP*
Ga0070749_1053811013300006802AqueousMNASVIASIVRHLLGIASGYLIAKGIELDSGTIETVSGSIGSLLAVGWSLWSKRAEKVA*
Ga0075464_1022313733300006805AqueousMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKTP*
Ga0070754_1013455333300006810AqueousMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVSGSIGSLLAVGWSLWSKKADKVA*
Ga0075473_1006693813300006875AqueousMNASVIASIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSK
Ga0075472_1009615453300006917AqueousMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKVA*
Ga0102976_111531233300007169Freshwater LakeMNASVISSIVRHLLGIAGGWLLAKGISLDAGTIETIAGSVGSLLAVGWSLYAKRGSATPSA*
Ga0075460_1006377933300007234AqueousITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKVA*
Ga0075458_1010381133300007363AqueousTMNASVISSIVRHLLGIAGGWLLAKGISLDAGTVETIAGSVGSLLAVGWSLYAKRGSATPSA*
Ga0099851_116937323300007538AqueousMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRADKVA*
Ga0099848_120199123300007541AqueousMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVSGSIGSLLAVGWSLWSKRAEKVA*
Ga0114346_101209433300008113Freshwater, PlanktonMNASVISSIVRHLLGIAGGWLLAKGISLDAGTVETIAGSVGSLLAVGWSLYAKRGSAAPSA*
Ga0114350_107060633300008116Freshwater, PlanktonMNPSIISSIVRHLLGIASGWLLAKGIELDAGAIETIAGALGSLGALGWSLWSKRPAKVA*
Ga0114350_117812123300008116Freshwater, PlanktonMNASVISSIVRHLLGIAGGWLLAKGISLDAGTVETIAGSVGSLLAVGWSLYAKRGSATPAA*
Ga0114355_110603033300008120Freshwater, PlanktonMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKKADKVA*
Ga0114363_106709633300008266Freshwater, PlanktonMNSSVLASIVRHLLGIASGWLLAKGIELDAGAIETIAGALGSLGALGWSLWSKRADKVA*
Ga0114876_101371693300008448Freshwater LakeMNSSVLSSVVRHALGIASGWLLAKGIELDAGTIEIIAGALGSLGAVGWSLW
Ga0114880_123888813300008450Freshwater LakeVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKKADKVA*
Ga0105102_1013310533300009165Freshwater SedimentMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKKAEKTP*
Ga0105104_1021926233300009168Freshwater SedimentSVISSIVRHLLGIAGGWLLAKGISLDAGTVETIAGSVGSLLAVGWSLYAKRGSATPSA*
Ga0129333_1096418223300010354Freshwater To Marine Saline GradientMNASVISSIVRHLLGIAGGWLLAKGISLDAGTVETIAGSVGSLLAVGWSLYAKRGSATTSA*
Ga0129333_1139488313300010354Freshwater To Marine Saline GradientMNASVIASIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRVEKTP*
Ga0119931_101544313300011984Drinking Water Treatment PlantSILASVVRHLLGIASGWLLAKGIELDAGAIETIAGALGSLGALGWSLWSKRADKVA*
Ga0153801_100084543300012017FreshwaterMNASVFTSIVRHLLGIGSGWLLAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKTP*
Ga0177922_1028513813300013372FreshwaterMNATVITSIVRHLLGIASGYLIAKGIELDSGTVETVAGSIGSLLAVGWSLWSKRAEKTP*
Ga0177922_1134248133300013372FreshwaterMNASVFTSIVRHLLGIGSGWLLAKGIELDSGTVETVAGSIGSLLAVGWSLWSKRAEKVA*
Ga0181352_1000811143300017747Freshwater LakeMNASVVASIVRHLLGIASGWLLAKGIDLDATSIETISGGLGSLLAVAWSIWAKKPVKAE
Ga0181352_116007213300017747Freshwater LakeMNASTIASIIRHTLGIASGWLLARGIELDSGAIEIIAGATGSLLAVGWSIWTKRQSAKV
Ga0181344_107231133300017754Freshwater LakeMNATTIAAVVRHLLGIAGGWLLAKGVSLDAGTIETISGAVGSLIAVGWSLYSKQKPKDAA
Ga0181343_101911023300017766Freshwater LakeMNSTTITAIVRHLLGIASGYLIAKGVELDAATIEIVAGAVGSLLAVGWSLWAKRAPKE
Ga0181343_121132623300017766Freshwater LakeMNTTVITSIVRHLLGIASGYLIAKGIELDAATIEIVAGAVGSLLAVGWSLWAKRAPKE
Ga0181346_104957823300017780Freshwater LakeMNATTIAAVVRHLLGIAGGWLLAKGLSLDAGTIETISGAVGSLIAVGWSLYSKQKPKDAA
Ga0181355_1000574173300017785Freshwater LakeMNPSIIASIVRHLLGIASGWLLAKGIELDAGAIETIAGALGSLGALGWSLWSKRPAKVA
Ga0181355_112978933300017785Freshwater LakeMNASVISSIVRHLLGIAGGWLLAKGISLDAGTIETIAGSVGSLLAVGWSLYSKRGSATPS
Ga0181355_137550013300017785Freshwater LakeMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLW
Ga0181359_104801053300019784Freshwater LakeMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKKADKVA
Ga0181359_105915753300019784Freshwater LakeMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKTP
Ga0207193_109441733300020048Freshwater Lake SedimentMNASVISSIVRHLLGIAGGWLLAKGISLDAGTVETIAGSVGSLLAVGWSLYAKRGSATPS
Ga0194115_1046437833300020183Freshwater LakeMNASVISSIVRHLLGIAGGWLLAKGIALDAGTIETIAGSVGSLLAVGWSIWAKRQPPTAP
Ga0194124_1010902443300020196Freshwater LakeTVNASVISSIVRHILGIAGGWLLAKGIALDAGTIETIAGSVGSLLAVGWSIWSKRQPPTA
Ga0194116_1004603543300020204Freshwater LakeVNASVISSIVRHILGIAGGWLLAKGIALDAGTIETIAGSVGSLLAVGWSIWSKRQPPTAP
Ga0208050_102245123300020498FreshwaterMNPSLIASIVRHLLGIGSGWLLAKGIDLDAGTVETIAGAIGSLVAVGWSIWSKRVIVPTASEKA
Ga0208090_100795933300020513FreshwaterMNPSLIASIVRHLLGIGSGWLLAKGIDLDAGTVETIAGAIGSLVAVGWSIWSKRVTVPAAPEKA
Ga0207939_102926713300020536FreshwaterGSVRIGAMNPSLIASIVRHLLGIGSGWLLAKGIDLDAGTVETIAGAIGSLVAVGWSIWSKRVIVPTASEKA
Ga0208231_101529923300020557FreshwaterMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRVEKTP
Ga0222713_1074725523300021962Estuarine WaterIVRHLLGIGSGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKTP
Ga0222712_1066201723300021963Estuarine WaterMNATVITSIVRHLLGIASGYLIAKGIELDSGTVETIAGSIGSLLAVGWSLWSKRAEKTP
Ga0181353_111897313300022179Freshwater LakeYSGVRIGCKSHQRMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKKADKVA
Ga0196901_121718613300022200AqueousMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRADKVA
Ga0181351_100195053300022407Freshwater LakeMNSSVLSSIVRHALGIASGWLLAKGIELDAGTIEIIAGALGSLGAVGWSLWSKRAAKVS
Ga0181351_120423213300022407Freshwater LakeMNATTIAAVVRHLLGIAGGWLLAKGVSLDAGTIETVSGALGSLIAVGWSLYSKQKPKDAA
Ga0255178_100099953300024298FreshwaterMNATIIASIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKVS
Ga0255178_106662413300024298FreshwaterMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSK
Ga0255169_100023033300024356FreshwaterMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKVS
Ga0255169_1000517213300024356FreshwaterMNATIIASIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWS
Ga0255165_100421133300024357FreshwaterITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKVS
Ga0255181_101190423300024502FreshwaterMNASVISSIVRHLLGIAGGWLLAKGISLDAGTIETIAGSVGSLLAVGWSLYAKRGSAAPS
Ga0256343_109806813300024541FreshwaterMNASVISSIVRHLLGIAGGWLLAKGISLDAGTIETIAGSVGSLLAVGWSL
Ga0256342_103522813300024548FreshwaterMNATIIASIVRHLLGIASGYLIAKGIELDSGTIETIAGSIGSLLAVGWSLWSKRAEKVS
Ga0256337_111648113300024573FreshwaterMNASVISSIVRHLLGIAGGWLLAKGISLDAGTIETIAGSVGSLLAVGWSLYAKRGSASPS
Ga0208546_109901633300025585AqueousMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKR
Ga0208974_103821023300027608Freshwater LenticMNASVFTSIVRHLLGIGSGWLLAKGIELDSGTVETVAGSIGSLLAVGWSLWSKRAEKTP
Ga0208974_111989413300027608Freshwater LenticMNASVFTSIVRHLLGITSGWLLAKGIELDSGTVETIAGSIGSLLAVGWSLWSKRAEKVA
Ga0255184_101899233300028091FreshwaterNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKVS
Ga0255279_106926313300028530FreshwaterMNASVIASIVRHLLGIASGYLIAKGIELDSGTIETVSGSIGSLLAVGWSLWSKRAEKVA
Ga0315907_1053856033300031758FreshwaterMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRADK
Ga0315907_1068127613300031758FreshwaterMNATTIAAVVRHLFGIAGGWLLAKGISLDAGTIETVSGALGSLIAVGWSLWAKQTPKDAA
Ga0315907_1090989123300031758FreshwaterMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKKADKVA
Ga0315899_10000610323300031784FreshwaterMNSSVLSSVVRHALGIASGWLLAKGIELDAGTIEIIAGALGSLGAVGWSLWSKRAAKVA
Ga0315909_1074601823300031857FreshwaterMNATTIAAVVRHLFGIAGGWLLAKGISLDAGTIETVSGALGSLIAVGWSLWAKQKPKDAA
Ga0315904_1010829333300031951FreshwaterMNPSIISSIVRHLLGIASGWLLAKGIELDAGAIETIAGALGSLGALGWSLWSKRPAKVA
Ga0315904_1068876213300031951FreshwaterMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRAEKTP
Ga0315906_1016957043300032050FreshwaterMNASVISSIVRHLLGIAGGWLLAKGISLDAGTIETIAGSVGSLLAVGWSLYAKRG
Ga0315902_1080607933300032093FreshwaterHQRMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRADKVA
Ga0316616_10171556023300033521SoilMNSSVISSIVRHLLGIAGGWLLAKGISLDAGTIETIAGSVGSLLAVGWSLYSKRASATPS
Ga0334982_0536196_214_3933300033981FreshwaterMNATVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLVAVGWSLWSKKADKVA
Ga0335003_0433197_184_3633300033995FreshwaterMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLVAVGWSLWSKKADKVA
Ga0334986_0028484_70_2493300034012FreshwaterMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKRADKVA
Ga0334985_0651290_326_5083300034018FreshwaterMNATTIAAVVRHLLGIAGGWLLAKGVSLDAGTIETISGAVGSLIAVGWSLYAKQKPKDAA
Ga0335028_0019769_3100_32793300034071FreshwaterMNASVITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKKAEKTP
Ga0335010_0038089_208_3933300034092FreshwaterMNASVISSIVRHLLGIAGGWLLAKGISLDAGTVETIAGSVGSLVAVGWSLYAKRGSATPS
Ga0335031_0042853_3109_32733300034104FreshwaterITSIVRHLLGIASGYLIAKGIELDSGTIETVAGSIGSLLAVGWSLWSKKADKVA
Ga0335031_0431897_393_5783300034104FreshwaterMNASVISSIVRHLLGIAGGWLLAKGISLDAGTVETIAGSVGSLLAVGWSLYSKRGSATPS


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