NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104853

Metagenome Family F104853

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104853
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 68 residues
Representative Sequence MKMGVGGVSAKTSYRLEDLARGLDQHIRLTNERIEDELARVGRLRRARRQVELRMWRTSPLFCKPR
Number of Associated Samples 78
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 16.00 %
% of genes near scaffold ends (potentially truncated) 29.00 %
% of genes from short scaffolds (< 2000 bps) 77.00 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(42.000 % of family members)
Environment Ontology (ENVO) Unclassified
(53.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.74%    β-sheet: 0.00%    Coil/Unstructured: 54.26%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02720DUF222 39.00
PF01037AsnC_trans_reg 26.00
PF01904DUF72 6.00
PF00154RecA 4.00
PF02811PHP 1.00
PF03575Peptidase_S51 1.00
PF03167UDG 1.00
PF00817IMS 1.00
PF07969Amidohydro_3 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 6.00
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 4.00
COG0389Nucleotidyltransferase/DNA polymerase DinP involved in DNA repairReplication, recombination and repair [L] 1.00
COG0692Uracil-DNA glycosylaseReplication, recombination and repair [L] 1.00
COG1573Uracil-DNA glycosylaseReplication, recombination and repair [L] 1.00
COG3663G:T/U-mismatch repair DNA glycosylaseReplication, recombination and repair [L] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100435345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1189Open in IMG/M
3300002245|JGIcombinedJ26739_100634987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium945Open in IMG/M
3300002558|JGI25385J37094_10039685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1625Open in IMG/M
3300002908|JGI25382J43887_10050495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2260Open in IMG/M
3300005171|Ga0066677_10251143All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300005172|Ga0066683_10134465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1513Open in IMG/M
3300005174|Ga0066680_10256147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1112Open in IMG/M
3300005174|Ga0066680_10706959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium618Open in IMG/M
3300005176|Ga0066679_10206517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1253Open in IMG/M
3300005176|Ga0066679_10464490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium828Open in IMG/M
3300005178|Ga0066688_10155803All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1433Open in IMG/M
3300005178|Ga0066688_10500474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium782Open in IMG/M
3300005179|Ga0066684_10021559All Organisms → cellular organisms → Bacteria3361Open in IMG/M
3300005180|Ga0066685_10576783All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium775Open in IMG/M
3300005181|Ga0066678_10134217All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1534Open in IMG/M
3300005181|Ga0066678_10739778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium653Open in IMG/M
3300005445|Ga0070708_100161615All Organisms → cellular organisms → Bacteria2087Open in IMG/M
3300005447|Ga0066689_10049316All Organisms → cellular organisms → Bacteria2250Open in IMG/M
3300005447|Ga0066689_10463390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium796Open in IMG/M
3300005468|Ga0070707_100003728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium14376Open in IMG/M
3300005518|Ga0070699_101081493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium736Open in IMG/M
3300005536|Ga0070697_101257796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium660Open in IMG/M
3300005552|Ga0066701_10020774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium3259Open in IMG/M
3300005552|Ga0066701_10596230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium673Open in IMG/M
3300005555|Ga0066692_10681866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium639Open in IMG/M
3300005557|Ga0066704_10306306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1073Open in IMG/M
3300005557|Ga0066704_10677285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium652Open in IMG/M
3300005559|Ga0066700_10391840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium979Open in IMG/M
3300005559|Ga0066700_10552791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium803Open in IMG/M
3300005561|Ga0066699_11098521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium548Open in IMG/M
3300005569|Ga0066705_10194300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1268Open in IMG/M
3300005576|Ga0066708_10198806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1257Open in IMG/M
3300005586|Ga0066691_10251502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1038Open in IMG/M
3300005598|Ga0066706_10035240All Organisms → cellular organisms → Bacteria3242Open in IMG/M
3300005598|Ga0066706_10225212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1451Open in IMG/M
3300005598|Ga0066706_10292663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1279Open in IMG/M
3300006032|Ga0066696_10027782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2991Open in IMG/M
3300006046|Ga0066652_101574872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium605Open in IMG/M
3300006057|Ga0075026_100708748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium602Open in IMG/M
3300006796|Ga0066665_10215256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1500Open in IMG/M
3300006796|Ga0066665_11295297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium559Open in IMG/M
3300007258|Ga0099793_10013221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium3251Open in IMG/M
3300009012|Ga0066710_101409252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1080Open in IMG/M
3300009038|Ga0099829_10588481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium925Open in IMG/M
3300009089|Ga0099828_10535308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1056Open in IMG/M
3300009090|Ga0099827_10007526All Organisms → cellular organisms → Bacteria6775Open in IMG/M
3300009090|Ga0099827_11084392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium695Open in IMG/M
3300011269|Ga0137392_10016744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5049Open in IMG/M
3300012189|Ga0137388_10054042All Organisms → cellular organisms → Bacteria3273Open in IMG/M
3300012198|Ga0137364_10755827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium734Open in IMG/M
3300012199|Ga0137383_10372156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1047Open in IMG/M
3300012199|Ga0137383_11318394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium514Open in IMG/M
3300012200|Ga0137382_10412791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium952Open in IMG/M
3300012200|Ga0137382_11198494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium539Open in IMG/M
3300012201|Ga0137365_10032616All Organisms → cellular organisms → Bacteria3996Open in IMG/M
3300012202|Ga0137363_10222010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1525Open in IMG/M
3300012208|Ga0137376_10547665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1002Open in IMG/M
3300012208|Ga0137376_10709212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium868Open in IMG/M
3300012209|Ga0137379_11468234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium584Open in IMG/M
3300012211|Ga0137377_10669175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium973Open in IMG/M
3300012211|Ga0137377_11906843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium511Open in IMG/M
3300012285|Ga0137370_10770926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium597Open in IMG/M
3300012349|Ga0137387_10057976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2604Open in IMG/M
3300012359|Ga0137385_10688806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium854Open in IMG/M
3300012683|Ga0137398_10128198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1628Open in IMG/M
3300012917|Ga0137395_10000375All Organisms → cellular organisms → Bacteria18239Open in IMG/M
3300012917|Ga0137395_10368233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1025Open in IMG/M
3300012925|Ga0137419_11103789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium661Open in IMG/M
3300018468|Ga0066662_10439342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1164Open in IMG/M
3300018468|Ga0066662_11029027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium817Open in IMG/M
3300019888|Ga0193751_1011794All Organisms → cellular organisms → Bacteria4570Open in IMG/M
3300021559|Ga0210409_11700981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium507Open in IMG/M
3300022557|Ga0212123_10112083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2194Open in IMG/M
3300025910|Ga0207684_10083967All Organisms → cellular organisms → Bacteria2712Open in IMG/M
3300026295|Ga0209234_1264670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium556Open in IMG/M
3300026300|Ga0209027_1003185All Organisms → cellular organisms → Bacteria6197Open in IMG/M
3300026300|Ga0209027_1264203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium553Open in IMG/M
3300026301|Ga0209238_1093932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1026Open in IMG/M
3300026301|Ga0209238_1119071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium871Open in IMG/M
3300026310|Ga0209239_1147531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium939Open in IMG/M
3300026318|Ga0209471_1061489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1707Open in IMG/M
3300026326|Ga0209801_1079529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1439Open in IMG/M
3300026329|Ga0209375_1084831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1458Open in IMG/M
3300026331|Ga0209267_1076967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1449Open in IMG/M
3300026332|Ga0209803_1175287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium811Open in IMG/M
3300026334|Ga0209377_1092157All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1272Open in IMG/M
3300026342|Ga0209057_1036113All Organisms → cellular organisms → Bacteria2519Open in IMG/M
3300026528|Ga0209378_1102939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1258Open in IMG/M
3300026548|Ga0209161_10167019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1257Open in IMG/M
3300026550|Ga0209474_10064508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2564Open in IMG/M
3300027603|Ga0209331_1009359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2580Open in IMG/M
3300027643|Ga0209076_1045356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1241Open in IMG/M
3300027645|Ga0209117_1037482All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1486Open in IMG/M
3300027651|Ga0209217_1168208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium601Open in IMG/M
3300027748|Ga0209689_1253935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium716Open in IMG/M
3300028536|Ga0137415_10060393All Organisms → cellular organisms → Bacteria3657Open in IMG/M
3300031753|Ga0307477_10150224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1625Open in IMG/M
3300031962|Ga0307479_10242049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1780Open in IMG/M
3300031962|Ga0307479_11954577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium536Open in IMG/M
3300032180|Ga0307471_101040201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium985Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil42.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.00%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10043534523300002245Forest SoilMGVGGVSAKTSVRLEDLAVALDEHIRRTNQRIDDELVRVSRLRRARRKLELRMWRTSPLFCKTR*
JGIcombinedJ26739_10063498723300002245Forest SoilMKMGVGGVSARTSYRLEDLAVALDEHIRRTNERIDDEVARVSRLRRARRQLELRMWRTSPLFYKTR*
JGI25385J37094_1003968523300002558Grasslands SoilMGVGGVSARTRYRLEDLAVALDFHIRRTNERIDDELARVSRLRRARRQLELRAWRTSPRFCKTR*
JGI25382J43887_1005049543300002908Grasslands SoilMGVGGVSARTRYRLEDLAVALDFHIRRTNERIDDELARVSRLRRARRQXELRXWRTSPRFCKTR*
Ga0066677_1025114333300005171SoilMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVALRMWQTSLLFCKPR*
Ga0066683_1013446513300005172SoilILSPRPRTLKFLTLRTYVRIMGAMKMGVGGVSAKTSHRPEDLVRALDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKAR*
Ga0066680_1025614723300005174SoilMGVGGVSAKTSYRPEDFARALDLHISLTNERIDDEIARVGRLRRARRQLELRIWRTSPLFCKPR*
Ga0066680_1070695923300005174SoilMMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVALRMWQTSLLFCKPR*
Ga0066679_1020651713300005176SoilMFDIIELMKMGVGGTAAETSVRLEDLVTAIDAHLQYFDRVIDEDLARVSRLRRARRQLELQTWKTSPLFCKTR*
Ga0066679_1046449023300005176SoilMGVGGVSEKTSVRLEDLVIAIDEHIRLTDQRIEDELARAGRLRRARRQLELRMWRTSPLFCKPR*
Ga0066688_1015580323300005178SoilMGVGGVSAKTSSGLEDLVTAIDEHLQRFDRQIDEDLARVGRLRRARRQLELRLWTTSPLFCKTR*
Ga0066688_1050047413300005178SoilIRTYVRMILIMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR*
Ga0066684_1002155933300005179SoilMMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR*
Ga0066685_1057678323300005180SoilMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR*
Ga0066678_1013421723300005181SoilMGVGGVSAKTSSGLEDLVTAIDDHLQRFDREIDEDLARVNRLRRARRQLELRLWTTSPLFCKTR*
Ga0066678_1073977813300005181SoilMSPKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLGRARRQVELRMWRTSPLFCKPR*
Ga0070708_10016161533300005445Corn, Switchgrass And Miscanthus RhizosphereMGVGGVSEKTSVRLEDLVTAIDEHIRLTDQRIDDELARAGRLRRARRQLELRMWQTSPLFCKPR*
Ga0066689_1004931633300005447SoilMILIMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR*
Ga0066689_1046339023300005447SoilMKMGVGGVSAKTSSGLEDLVTAIDDHLQRFDREIDEDLARVNRLRRARRQLELRLWTTSPLFCKTR*
Ga0070707_10000372853300005468Corn, Switchgrass And Miscanthus RhizosphereMVIVKMGVGGVSEGTTVRLEDLVTAIDEHIRLTDQRIEDELARAGRLHRARRQLELRMWRTSPLFCKPR*
Ga0070699_10108149323300005518Corn, Switchgrass And Miscanthus RhizosphereMMGVGGVSAKTSLRLEDLVAAIDEHLQRFDQQIDEDLARVSRLRRARRQLELQMWRTSPLFCRTR*
Ga0070697_10125779623300005536Corn, Switchgrass And Miscanthus RhizosphereLRLEDLVIAIDEHIRRTDQRIEDELARAGRLRRARRQLELRMWRTSPLFCKPR*
Ga0066701_1002077453300005552SoilMGVGGVSAKTSYRLEDLARGLDQHIRLTDERIEDELARVGRLRRARRQVELRMWRTSPLFCKSR*
Ga0066701_1059623023300005552SoilMMKMGVGGMSPKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVALRMWQTSLLFCKPR*
Ga0066692_1068186623300005555SoilLDTTNICSYNGDMKMGVGGVSAKTSSGLEDLVTAIDEHLQRFDRQIDEDLARVGRLRRARRQLELRLWTTSPLFCKTR*
Ga0066704_1030630613300005557SoilDTTNICSYNGDMKMGVGGVSAMTSSGLDLVTAIDEHLQRFDRQIDEDLARVGRLRRARRQLELRLWTTSPLFCKTR*
Ga0066704_1067728513300005557SoilTLKFLTLRTYVRIILMMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR*
Ga0066700_1039184013300005559SoilMKMGVGGVSAMTSSGLDLVTAIDEHLQRFDRQIDEDLARVGRLRRARRQLELRLWTTSPLFCKTR*
Ga0066700_1055279123300005559SoilGGTAAETSVRPEDLVTAIDAHLQYFDRMIDEDLARVSRLRRARRQLELQIWKTSPLFCKTR*
Ga0066699_1109852123300005561SoilMMKMGVGGMSPKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR*
Ga0066705_1019430023300005569SoilLTLRTYVRIIEPMKLGVGGTAAETSVRLEDLVTAIDAHLQYFDRVIDEDLARVSRLRRARHQLELQIWKTSPLFCKTR*
Ga0066708_1019880623300005576SoilGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRHVELRMWRTSPLFCKPR
Ga0066691_1025150213300005586SoilLTLRTYVRIIEPMKMGGGTAAETSVRLEDLVTAIDAHLQYFDRMIDEDLARVSRLRRARRQLELQIWKTSPLFCKTR*
Ga0066706_1003524023300005598SoilMKLGVGGTAAETSVRLEDLVTAIDAHLQYFDRVIDEDLARVGRLRRARRQLELQIWKTSPLFCKTR*
Ga0066706_1022521233300005598SoilMGVGGVSAKTSYRPEDLARALDEHIRRTNQRIDDELARVNRLRRARRQVELRMWRTSPLFCKPR*
Ga0066706_1029266323300005598SoilMKMGVGGVSAKTSYRLEDLARGLDQHIRLTNERIEDELARVGRLRRARRQVELRMWRTSPLFCKPR*
Ga0066696_1002778223300006032SoilMKMGVGGTAAETSVRLEDLVTAIDAHLQYFDRVIDEDLARVSRLRRARRQLELQIWKTSPLFCKTR*
Ga0066652_10157487223300006046SoilLTLRTYVRIMGVMKMGVGGVSAKTSHRPEDLVRALDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKAR*
Ga0075026_10070874813300006057WatershedsMGVGGVSKKTSMRLEDLVTALDEHIRLTDLRIQDELARASRLRRARRQLELRMWQ
Ga0066665_1021525623300006796SoilMILIMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVALRMWQTSLLFCKPR*
Ga0066665_1129529713300006796SoilMKMGVGGVSAKTSSGLEDLVTAIDEHLQRFDRQIDEDLARVGRLRRARRQLELRLWTTSPLFCKTR*
Ga0099793_1001322153300007258Vadose Zone SoilMKMGVGGVSAKASVRLEDLVTAIDEHIRRTNQRIDDEHARVTRLRRARRQLELSMWRTSPLFCKPR*
Ga0066710_10140925223300009012Grasslands SoilMKMGVGGVSAKTSYRPEDLARALDQHISLTNERIDDELARVGRLRRARRQLELRMWRTSPLFCKAR
Ga0099829_1058848123300009038Vadose Zone SoilMKMGVGGVSAKTKWRLEDVATAIDEYLQRADREIDQDLARVSRLRRARRVLEHWMWQTSPLFCKTR*
Ga0099828_1053530813300009089Vadose Zone SoilMGVGGVSARTSYRLEDLAVALDEHIRRTNRRIDDELVRVSRLRRARRQLELRMWRTSPLFCKSR*
Ga0099827_1000752663300009090Vadose Zone SoilMKMGVGGNSTKTNWRLEDLVAALDEHIRRTNQRIDDELARVNRLRRARRQLELRMWRTSPLFCKPR*
Ga0099827_1108439223300009090Vadose Zone SoilMKMGVGGDSAKTSYRPEDLARALDLHIGLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKAR*
Ga0137392_1001674463300011269Vadose Zone SoilVKVGVGGVAEKVSMRLEDLVTALDEHIRLTDRRIEDELARASRLRRARRQLELRMWQTSPLFCKPR*
Ga0137388_1005404273300012189Vadose Zone SoilRTSYRLEDLAVALDEHIRLTNRRIDDELVRVIRLLRARRQLELRMWRTSPLFCKSR*
Ga0137364_1075582723300012198Vadose Zone SoilMGVGGVSAKTSYRPEDLARALDRHISLTNERIDDELARVGRLRRARRQLELRMWRTSPLFCKAR*
Ga0137383_1037215623300012199Vadose Zone SoilMNLGVGGVSAKTSHRPEDLVRALDLHIRLTNERIDDELARIGRLRRARRQLELRMWRTSPLFCKAR*
Ga0137383_1131839423300012199Vadose Zone SoilMGVMKMGVGGVSAKTSYRPEDLARALDQHISLTNERIDDELARVGRLRRARRQLELRMWRTSPLFCKAR*
Ga0137382_1041279123300012200Vadose Zone SoilMMMMGVGGMSAKTSYPLEDLAQGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR*
Ga0137382_1119849423300012200Vadose Zone SoilVRIMAFMKMGVGVVPARTSYRPEDLAVALDEHIRRTNQRIDDELARVNRLCRARRQLELPMWRTSPLFCQPR*
Ga0137365_1003261653300012201Vadose Zone SoilMGFMKMGVGGVSAKTSYRLEDLARGLDQHIRLTNERIEDELARVGRLRRARRQVELRMWRTSPLFCKPR*
Ga0137363_1022201043300012202Vadose Zone SoilMGVGGVSARTRYRLEDLAVALDFHIRRTNERIDDELARVSRLRRARRQLELRTWRTSPRFCKT
Ga0137376_1054766533300012208Vadose Zone SoilMGVGGVSAKTSYRPEDLARALDQHISLTNERIDDEPARVGRLRRARRQLELRKWRTSPLFCKPR*
Ga0137376_1070921223300012208Vadose Zone SoilGGDHERDSLTSFGRPQSLTLRTYVRIMAFMKMGVGGVPARTSYRPEDLAVALDEHIRRTNQRIDDELARVNRLCRARRQLELRMWRTSPLFCQPR*
Ga0137379_1146823423300012209Vadose Zone SoilKMGVGGVSAKTSYRLEDLARGLDQHIRLTNERIEDELARVVRLRRARRQVELRMWRTSPLFCKAR*
Ga0137377_1066917523300012211Vadose Zone SoilMRIMKMGVGGVSAKTRYRPEDLVRALDLHIRLTNERIDDELARIGRLRRARRQLELRMWRTSPLFCKAR*
Ga0137377_1190684323300012211Vadose Zone SoilMGVGGVSAKTSYRPEDLARALDQHISLTNERIDDELARVGRLRRARRQLELRMWRTSPLFCKAR*
Ga0137370_1077092623300012285Vadose Zone SoilGVSAKTSYRLEDLARGLDQHIRLTNERIEDELARVGRLRRARRQLELRMWRTSPLFCKAR
Ga0137387_1005797653300012349Vadose Zone SoilMKMGVGGVSAKTSYRPEDLVRALDLHISLTNERIDDELARVGRLRRARRQLELRMWRTSPLFCKAR*
Ga0137385_1068880613300012359Vadose Zone SoilLRTYVRIMGVVKMGVGGVSGKTSYRLEDLARGLDQHIRLTNERIEDELARVGRLRRARRQVELRMWRTSPLFCKPR*
Ga0137398_1012819823300012683Vadose Zone SoilMGVGGVSAKTSYPLEDLARGLDLHIRLTDERIDDELARIGRLRRARRQVELRMWRTSPLFCKAR*
Ga0137395_1000037523300012917Vadose Zone SoilLTLRTYVRIIVIVKMGGGGVAEKTSMRLEDLVTALDEHIRLTDQRIEDELARASRLRRARRQLELRMWQTSPLFCKPR*
Ga0137395_1036823323300012917Vadose Zone SoilMAVTTMGILSPRLAELKDLTLRTYVRIILMMKMGVGGMSAKTSYPLEDLARGLDLHIRLTDERIDDELARIGRLRRARRQVELRMWRTSPLFCKAR*
Ga0137419_1110378923300012925Vadose Zone SoilGVGGVSAKTSYRPEDLARALDLHIRLTNDRIDDELARIGRLRRARRQVELRMWRTSPLFCKPV*
Ga0066662_1043934223300018468Grasslands SoilMMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVALRMWQTSLLFCKPR
Ga0066662_1102902723300018468Grasslands SoilMGFMKMGVGGVSAKTSYRLEDLARGLDQHIRLTDERIEDELARVGRLRRARRQVELRMWRTSPLFCKSR
Ga0193751_101179443300019888SoilMGVGGVSEKTSVRLEDLVTALDEHIRLTDQRIEDELARASRLRRARRQLELRLWQTSPLFCKPR
Ga0210409_1170098113300021559SoilFVKMGVGGVSKKTTMRPEDLARALDEHIRLTDERIEDELARASRLRRARRQLELRMWRTSPLFCKPQ
Ga0212123_1011208333300022557Iron-Sulfur Acid SpringMFDIIKAMKLGVGGVSARTSYRLEDLAVALEVHINRTNQRIDDELARVDRLRRARRQLELRMWRTSPLFCRPR
Ga0207684_1008396743300025910Corn, Switchgrass And Miscanthus RhizosphereMGVGGVSEKTSVRLEDLVTAIDEHIRLTDQRIDDELARAGRLRRARRQLELRMWQTSPLFCKPR
Ga0209234_126467023300026295Grasslands SoilMMMMGVGGMSAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPDERRRGAVPQQSC
Ga0209027_100318523300026300Grasslands SoilMGVGGVSAKTSLGLEDLVRAIDEHLQRFDREIEVDLARVSRLRRARRQLELRMWRTSPLFCKTR
Ga0209027_126420323300026300Grasslands SoilHLLERARKSLTLRTYVRIIEVMKVGVGGTAAETSVRLEDLVTAIDAHLQYFDRVIDEDLARVSRLRRARRQLELQTWKTSPLFCKTR
Ga0209238_109393223300026301Grasslands SoilMMMMGVGGMSAKTSYPLEDLARGLDHHIRLTNERIDDELARIGRLRRARRQVELRMWRTFPLFCKPR
Ga0209238_111907113300026301Grasslands SoilMMMMGVGGMSAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR
Ga0209239_114753123300026310Grasslands SoilMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSLLFCKPR
Ga0209471_106148923300026318SoilMFDIIELMKMGVGGTAAETSVRLEDLVTAIDAHLQYFDRVIDEDLARVSRLRRARRQLELQTWKTSPLFCKTR
Ga0209801_107952933300026326SoilMGVGGVSAKTSSGLEDLVTAIDDHLQRFDREIDEDLARVNRLRRARRQLELRLWTTSPLFCKTR
Ga0209375_108483123300026329SoilMGAMKMGVGGVSAKTSHRPEDLVRALDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKAR
Ga0209267_107696723300026331SoilMILIMKMGVGGISAKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR
Ga0209803_117528723300026332SoilRIMRYMKMGVGGVSAKTSSGLEDLVTAIDDHLQRFDREIDEDLARVNRLRRARRQLELRLWTTSPLFCKTR
Ga0209377_109215713300026334SoilMGVGGVSAKTSYRPEDLARALDLHISLTNERIDDEIARVGRLRRARRQLELRIWRTSPLFCKPR
Ga0209057_103611333300026342SoilMMKMGVGGMSPKTSYPLEDLARGLDLHIRLTNERIDDELARIGRLRRARRQVELRMWRTSPLFCKPR
Ga0209378_110293923300026528SoilMKMGVGGVSAKTSSGLEDLVTAIDEHLQRFDRQIDEDLARVGRLRRARRQLELRLWTTSPLFCKTR
Ga0209161_1016701923300026548SoilMKLGVGGTAAETSVRLEDLVTAIDAHLQYFDRVIDEDLARVGRLRRARRQLELQIWKTSPLFCKTR
Ga0209474_1006450813300026550SoilTTNRPLTLRTYVRIIEAMKMGVGGTAAETSVRLEDLVTAIDAHLQYFDRVIDEDLARVSRLRRARRQLELQIWKTSPLFCKTR
Ga0209331_100935913300027603Forest SoilMGVGGVSARTSYRLEDLAVALDEHIRRTNERIDDEVARVSRLRRARRQLELRMWRTSPLFYKTR
Ga0209076_104535633300027643Vadose Zone SoilMKMGVGGVSAKASVRLEDLVTAIDEHIRRTNQRIDDEHARVTRLRRARRQLELSMWRTSPLFCKPR
Ga0209117_103748233300027645Forest SoilMKMGVGGVSARTSYRLEDLAVALDEHIRRTNERIDDEVARVSRLRRARRQLELRMWRTSPLFYKTR
Ga0209217_116820823300027651Forest SoilMKMGVGGVSAKTSLRLEDLVTAIDEHLQRFDREIAEDLARVSRLRRARRQLELRMWKTSPLF
Ga0209689_125393513300027748SoilMKMGVGGVSAMTSSGLDLVTAIDEHLQRFDRQIDEDLARVGRLRRARRQLELRLWTTSPLFCKTR
Ga0137415_1006039323300028536Vadose Zone SoilMGVGGVSARTRYRLEDLAVALDFHIRRTNERIDDELARVSRLRRARRQLELRAWRTSPRFCKTR
Ga0307477_1015022423300031753Hardwood Forest SoilMGVGGGSEKTSVRLEDLVIAIDEHIRLTDQRIEDELARAGRLRRARRQLEFRLWRTSPLFCKPR
Ga0307479_1024204923300031962Hardwood Forest SoilMGVGGVSEKTSVRLEDLVIAIDEQIRLTDQRIEDELARAGRLRRARRQLEFRLWRTSPLFCKPR
Ga0307479_1195457713300031962Hardwood Forest SoilMGVGGVSAKTSVRLEDLAVALDEHIRRTNERIDDELVRVSRLRRARRQLELRMW
Ga0307471_10104020113300032180Hardwood Forest SoilMGVGGVSEKTSVRLEDLVIAIDEHIRRTDQRIEDELARASRLRRARRQLELRLWRTSPLFCKPR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.