NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104834

Metagenome Family F104834

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104834
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 49 residues
Representative Sequence DGLFESLIMLSISGVFFLNVFWELRDRGLFGKTKAEPAKLPPASEES
Number of Associated Samples 73
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 4.00 %
% of genes from short scaffolds (< 2000 bps) 2.00 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (96.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(58.000 % of family members)
Environment Ontology (ENVO) Unclassified
(52.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 37.33%    β-sheet: 0.00%    Coil/Unstructured: 62.67%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02985HEAT 24.00
PF13646HEAT_2 6.00
PF12838Fer4_7 3.00
PF13620CarboxypepD_reg 2.00
PF13513HEAT_EZ 2.00
PF05685Uma2 1.00
PF09957VapB_antitoxin 1.00
PF04255DUF433 1.00
PF13437HlyD_3 1.00
PF12762DDE_Tnp_IS1595 1.00
PF01850PIN 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 1.00
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A96.00 %
All OrganismsrootAll Organisms4.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300012189|Ga0137388_10062927All Organisms → cellular organisms → Bacteria → Acidobacteria3059Open in IMG/M
3300012582|Ga0137358_10042744All Organisms → cellular organisms → Bacteria → Acidobacteria3006Open in IMG/M
3300012930|Ga0137407_10271083All Organisms → cellular organisms → Bacteria → Acidobacteria1544Open in IMG/M
3300027862|Ga0209701_10116807All Organisms → cellular organisms → Bacteria → Acidobacteria1655Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil58.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027174Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25612J43240_106439513300002886Grasslands SoilTGTITTVDGLFESLIMLSISGIFFLNVFWELRDHGLLGKTKAAEPAKPPPASEES*
Ga0066672_1048553713300005167SoilTITTVDGLFESIIMLSISGVFFLNVFWELRDRGLFGKGKAEPSKTPPASDEG*
Ga0066681_1067920613300005451SoilVDGLFESIIMLSISGVFFLNVFWELRDRGLFGKGKAEPSKTPPASDEG*
Ga0066695_1070729813300005553SoilSGVFFLNVFWELRDRGLFGKSKAEPSKQPPASDEG*
Ga0066661_1020288523300005554SoilITTVDGLFESIIMLSISGVFSLNVFWELRDRGLFGKSKAEPSKTPPASDES*
Ga0066661_1079503223300005554SoilGLFESIIMLSISGVFFLNVFWELRDRGLLGKSKSEPCKQPPASDES*
Ga0066704_1017037613300005557SoilTITTVDGLFESIIMLSISGVFSLNVFWELRDRGLFGKSKAEPSKTPPASDES*
Ga0066700_1088961613300005559SoilWIVVSGTITTVDGLFESIIMLSISGVFFLNVFWELRDRGLFGKSKAEPSKTPPASDES*
Ga0066691_1038975923300005586SoilIMLSISGVFFLNVFWELRDRGLFGKSKSEPSKPAPSSDEN*
Ga0066651_1000337963300006031SoilAWIIVTGTITTVDGLFECLIMLSISGIFFLNVFWELRDHGLLGKSKAAEPTKPPPASEES
Ga0066665_1096850513300006796SoilGIVFLNVFLELRDHGLLGKSKAAEPAKPPPASEES*
Ga0066659_1062005513300006797SoilVDGLFESIIMLSISGVFFLNVFWELRDRGLFGKGKAEPSKPSSSSDEG*
Ga0066659_1154393623300006797SoilVDGLFESIIMLSISGVFFLNVFWELRDRGLFGKSKAEPSKQPPASDEG*
Ga0099791_1039457523300007255Vadose Zone SoilIMLSISNVFFLNVFWELQDRELFGKSNAEPAKQPPSASDEG*
Ga0099793_1016478433300007258Vadose Zone SoilMLSISGVFFLNVFWELRDQGLFGKGKAAEPAKPSSSSDEG*
Ga0099794_1013464013300007265Vadose Zone SoilTVDGLFESLIMLSISGVFFLNVFWECRDRGLFGKGKSEPSKQPPSSDES*
Ga0099829_1114889823300009038Vadose Zone SoilVDGLFESLIMLSLSGVFFLNAFWELRDRRLLGKSKTDSTKPPPPSEES*
Ga0099829_1180317913300009038Vadose Zone SoilDGLFESLIMLSISGIFFLNVFWELRDHGLLGKTKAAEPAKPPPASEES*
Ga0099828_1112802723300009089Vadose Zone SoilIIFTGTITTVDGLFESLIMLSISGVFFLNVFWELRDRGLLGKSKPAPSKQPPSSEES*
Ga0099828_1126309523300009089Vadose Zone SoilFEILIMLSISGVFFLNVFWELRDQGLFGKGKAAEPAKPSSSSDEG*
Ga0099828_1138203313300009089Vadose Zone SoilVFFLNVFWELRDRGLLGKSKAEPAKQPPSASDET*
Ga0066709_10182429513300009137Grasslands SoilTTVDGLFESIIMLSISGVFFLNVFWELRDRGLFGKSKSEPSKTPPASDES*
Ga0134109_1002511633300010320Grasslands SoilVDGLFESLIMLSISGVLFLNVFWELRDRGLFGKSKSEPSKPPSSLDEG*
Ga0134084_1002420733300010322Grasslands SoilLIMLSISGVFFLNVFWELRDRGLFGKSKSEPSKPPSSLDEG*
Ga0137392_1103718023300011269Vadose Zone SoilDGLFESLIMLSISGVFFLNVFWELRDRGLFGKTKAEPAKLPPASEES*
Ga0137392_1119840713300011269Vadose Zone SoilLTTVDGLFESLIMLSISGVFFLNVFWELRDRGLLGKSKAEPAKQPPSASDET*
Ga0137391_1004853913300011270Vadose Zone SoilSLIMLSISGVFFLNVFWELRDRGLFGKTKAEPAKQPPASDES*
Ga0137391_1022856633300011270Vadose Zone SoilFESLIMLSISGVFFLNVFWELRDRGLFGKTKAEPAKQPPASEES*
Ga0137393_1009041633300011271Vadose Zone SoilIVSGTITTVDGLFECLIMLSLSGIFFLNAFWELRDRGLFGKTKPDSTKPPPASEES*
Ga0137389_1147401823300012096Vadose Zone SoilAGIAWIVVSGTITTVVGLFESLIMLSLSGVFFLNAFWELRDRRLLGKSITDSTKPPPPSEES*
Ga0137388_1006292713300012189Vadose Zone SoilLIMLSISGVFFLNVFWELRDQGLFGKGKAAEPAKPSSSSDES*
Ga0137388_1094487623300012189Vadose Zone SoilLIMLSISGVFFLNVFWELRDQGLFGKGKAAEPAKPSSSSDEG*
Ga0137388_1095730513300012189Vadose Zone SoilSLIMLSISGVFFLNVFWELRDRGLLGKSKAAPSKQPPSSEES*
Ga0137365_1062437313300012201Vadose Zone SoilAWIVVSGTITTVDGLFESLIMLSLSGVFFLNAFWELRDRRLLGKSKTGSTKPPPPSEES*
Ga0137363_1069380913300012202Vadose Zone SoilITTVDGLFESIIMLSISGVFFLNVFWELRDRGLFSKSKPEPSKQPPSSDES*
Ga0137363_1093138423300012202Vadose Zone SoilTGTMTTVDGLFEILIMLSISGVFFLNVIWELRDQGLFGKGKAAEPSKPSSAPEES*
Ga0137362_1088760823300012205Vadose Zone SoilLIMLSISGVFFLNVFWELRDRGLFGKTKAEPAKLPPASEES*
Ga0137381_1003268513300012207Vadose Zone SoilMLSLSGVFFLNAFWELRDRRLLGKSKTDSTKPPPPSEES*
Ga0137376_1161054123300012208Vadose Zone SoilIIVTGTITTVDGLFECLIMLSISGIFFLNVFWELRDHGLLGKSKAAEPAKPPPASEES*
Ga0137378_1055119113300012210Vadose Zone SoilSGTITTVDGLFESLIMLSISGIFFLNVFWELRDRGLFGKSKTAPPKQPPASEES*
Ga0137378_1101784613300012210Vadose Zone SoilSGTITTVDGLFESLIMLSISGIFFLNVFWELRDRSLFGKSKVAPPKQPPASEES*
Ga0137377_1035983613300012211Vadose Zone SoilVTGTITTVDGLFECLIMLSISGIFFLNVFWELRDHGLLGKSKAAEPAKPPPASEES*
Ga0137386_1001852013300012351Vadose Zone SoilIAWIVVSGTITTVDGLFESLIMLSLSGVFFLNAFWELRDRRLLGKSKTDSTKPPPPSEES
Ga0137361_1040209013300012362Vadose Zone SoilTITTVDGLFESLIMLSISGVFFLNVFWECRDRGLFGKTKAEPAKQPPSSEES*
Ga0137361_1059031313300012362Vadose Zone SoilIAWIIVTGTITTVDGLFECLIMLSISGIFFLNVFWELRDHGFLGKSKAAEPAKPPPASEES*
Ga0137361_1154449423300012362Vadose Zone SoilIMLSLSGVFFLNAFWELRDRRLLGKSKTDSTKPPPPSEES*
Ga0137390_1070630113300012363Vadose Zone SoilTVDGLFESLIMLSISGVFFLNVFWECRDRGLFGKTKAEPAKQPPSSEES*
Ga0137358_1004274413300012582Vadose Zone SoilGWIIYTGTLTTVDGLFEILIMLSISGVFFLNVFWELRDQGLFGKSKAAESAKPSSPSDES
Ga0137397_1005407143300012685Vadose Zone SoilGWIIYTGTMTTVDGLFEILIMLSISGIFFLNVFWELRDRGLFGKGKAAEPSKPSSGSEES
Ga0137395_1037760123300012917Vadose Zone SoilESLIMLSISGVFFLNVFWELRDRGLFGKSKSEPSKQPPSSDES*
Ga0137396_1110057313300012918Vadose Zone SoilLFEILIMLSISGVFFLNVFWELRDQGFFGKGKAAEPAKPSSSSDDG*
Ga0137396_1120926213300012918Vadose Zone SoilSISGIFFLNVFWELRDHGLLGKSKAAEPAKPPPASEES*
Ga0137359_1012681133300012923Vadose Zone SoilSGTLTTVDGLFESLIMLSISGVFFLNVFWELQDRGLFGKGKAEPAKPPPASEES*
Ga0137407_1027108333300012930Vadose Zone SoilGLFEILIMLSISGVFFLNVFWELRDQGLFGKGKPAEPAKPSSSSDEG*
Ga0137407_1221262613300012930Vadose Zone SoilSISGVFFLNVIWELRDQGLFGKGKAAEPSKPSSAPEES*
Ga0134076_1023581423300012976Grasslands SoilAWIVVSGTITTVDGLFESLIMLSLSGVFFLNAFWELRDRRLLGKSKTDSTKPPPPSEES*
Ga0137414_104892013300015051Vadose Zone SoilYSKALFESLIMLSISGVFFLNVFWELRDRGLFGKAKAAPAKPPSASEES*
Ga0137405_103775913300015053Vadose Zone SoilSKASSCMLSISGVFFLNVFWELRDRGLFGKAKAAPAKPPSASEES*
Ga0137405_108260023300015053Vadose Zone SoilLTTVDGLFESLIMLSISGVFFLNVFWELRDRGLFGKAKAAPAKPPSASEES*
Ga0137405_119642523300015053Vadose Zone SoilFESLIMLSISGVFFLNVFWELRDRGLFGKAKAAPAKPPSASEES*
Ga0137405_128423513300015053Vadose Zone SoilSISGVFFLNVFWELRDRGLFGKAKAAPAKPPSASEES*
Ga0137405_136480523300015053Vadose Zone SoilMTTVDGLFEILIMLSISGIFFLNVFWELRDRASSEKAKAAEPSTLLGL*
Ga0137420_107058513300015054Vadose Zone SoilHHRGVDGLFESLIMLSISGIFFLNVFWELRDHGLLGKSKAAEPAKPPPPASEES*
Ga0137420_123739523300015054Vadose Zone SoilITTVDGLFESLIMLSISGIFFLNVFWELRDDGLLGKSKAAEPAKPPPPASEES*
Ga0137420_128923933300015054Vadose Zone SoilITTVDGLFESLIMLSISGIFFLNVFWELRDHGLLGKSKAAEPAKPPPPASEES*
Ga0137420_137495813300015054Vadose Zone SoilVDGLFESLIMLSISGIFFLNVFWSFATTAPGKEQAAEPAKPPPASEES*
Ga0187820_130482813300017924Freshwater SedimentMLSLSGIFFLNVFWELRDRGLLGHAKSESAKPPAASDEG
Ga0187821_1049754013300017936Freshwater SedimentESLIMLSLSGVFFLNVLWELRDKGILGKKGGGPPKTPPPSEES
Ga0187808_1043260323300017942Freshwater SedimentSGTVTTVDGLFECLIMLSLSGIFFLNVFWELRDRGLLGHAKSESAKPPAASDEG
Ga0066667_1063916813300018433Grasslands SoilLIMLSISGIFFLNVFWELRDHGLLGKSKAAEPAKPPPGSEES
Ga0066662_1242677423300018468Grasslands SoilTTVDGLFECLIMLSLSGVFFLNAFWELRDRGLFGKNKPDSTKPPPASEES
Ga0179590_119665623300020140Vadose Zone SoilLIMLSISGIFFLNVFWELRDHGLLGKSKAAEPAKPPPASEES
Ga0179594_1006418923300020170Vadose Zone SoilYTGTLTTVDGLFEILIMLSISGVFFLNVFWELRDQGLFGKGKAAEPAKPSASSDES
Ga0179594_1014289823300020170Vadose Zone SoilGWIIYTGTMTTVDGLFAILIMLSISGVFFLNVFWELRDQGLFGKGKAAEPAKPSSSSDEG
Ga0179596_1067807813300021086Vadose Zone SoilSGTITTVDGLFESLIMLSLSGVFFLNAFWELRDRRLLGKSKTDSTKPPPPSEES
Ga0210404_1029944813300021088SoilTDGLFESLIMLSISGIFFLNVFWELRDRGLLGKSKAEPSKPSSGSEDS
Ga0210404_1086708513300021088SoilSGIFFLNVLWELRDRGLFGKSKAASPKPAPVPEKE
Ga0210404_1086750323300021088SoilIAWIVVTGTITTVDGLFECLIMLSISGVFFLNVFWELRDHGLLGKSKAAPSKQPPASEES
Ga0210400_1003676813300021170SoilTITTVDGLFECLIMLSISGIFFLNVFWELRDHGLFGKPKTETAGKPPASDES
Ga0210408_1067488123300021178SoilIVVTGTLTTTDGLFESLIMLSISGIFFLNVFWELRDRGLLGKSKAEPSKPSSGSEDS
Ga0210394_1167203713300021420SoilECLIMLSISGIFFLNVFWELRAHGFLGKPKVEPATAKPAPPSEES
Ga0210409_1169107213300021559SoilDGLFESLIMLSISGIFFLNVFWELRDHGLLGKTKAAEPAKPPPASEES
Ga0209438_102467513300026285Grasslands SoilITTVDGLFESLIMLSISGIFFLNVFWELRDHGLLGKTKAAEPAKPPPASEES
Ga0209154_118571913300026317SoilSLIMLSISGVFFLNVFWELRDRGLFAKSKSEPSKPPSSLDEG
Ga0209057_104530823300026342SoilMLSISGVFFLNVFWELRDRGLFGKSKAEPSKTPPASDEG
Ga0209160_106969713300026532SoilTMTTVDGLFEILIMLSISGVFFLNVFWELRDQGLFGKGKAAEPAKPSSSSDEG
Ga0209056_1034908923300026538SoilTITTVDGLFESLIMLSLSGVFFLNAFWELRDRRLLGKSKTDSTKPPPPSEES
Ga0207948_104467923300027174Forest SoilTGTLTTTDGLFESLIMLSISGIFFLNVFWELRDRGLLGKSKAEPSKPSSGSEDS
Ga0209004_105271323300027376Forest SoilAWIVVAGSITTVDGLFMSLILLSLSGIFLLNVFWEAQDRGLFSFLHKGKTAAGKEPPASKAS
Ga0209076_107491213300027643Vadose Zone SoilLFECLIMLSISGIFFLNVFWELRDHGLLGKSKAAEPAKTPPPSEES
Ga0209388_118957223300027655Vadose Zone SoilWIIYTGTMTTVDGLFESLIMLSISGIFFLNVFWELRDQGLFGKGKAAEPSKPPSTSEES
Ga0209588_110571913300027671Vadose Zone SoilSGVFFLNVFWECRDRGLFGKGKSEPSKQPPSSDES
Ga0209580_1039592313300027842Surface SoilILLTLSGIFFLNVLWELRDRGLFGKGKAASPKPAPAPEKE
Ga0209701_1011680713300027862Vadose Zone SoilIMLSISGIFFLNVFWELRDRGLFGKGKAAPGKQPPSSDES
Ga0137415_1037300123300028536Vadose Zone SoilGLFESLIMLSISGIFFLNVFWELRDHGLLGKSKAAEPAKPPPASEES
Ga0307469_1155190723300031720Hardwood Forest SoilTTVDGLFEILIMLSISGVFFLNVFWELRDQGLFGKGKAAEPPKPSPSSDEG
Ga0307479_1196087123300031962Hardwood Forest SoilFESLIMLSISGVFFLNVFWELRDRGLLGKTKAEPAKQPPASEES
Ga0307479_1212156713300031962Hardwood Forest SoilVSGTLTTVDGLFESLIMLSISGVFFLNVFWELRDRGVLGKSKPEPPKPSSSSDES
Ga0307479_1218380123300031962Hardwood Forest SoilVSGTLTTVDGLFESLIMLSISGVFFLNVFWELRDRGVLGKSKSEPPKPSSSSDES
Ga0307471_10125193423300032180Hardwood Forest SoilGLFEILIMLSISGVFFLNVIWELRDQGLFGKGKAAEPSKPSSAPEES


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.