Metagenome / Metatranscriptome Family F104809

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F104809
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	103 residues
Representative Sequence	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Number of Associated Samples	79
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.00 %
% of genes near scaffold ends (potentially truncated)	42.00 %
% of genes from short scaffolds (< 2000 bps)	77.00 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (47.000 % of family members)
Environment Ontology (ENVO)	Unclassified (76.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 28.30% β-sheet: 28.30% Coil/Unstructured: 43.40%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF01568	Molydop_binding	40.00
PF06537	DHOR	31.00
PF04879	Molybdop_Fe4S4	3.00
PF00355	Rieske	2.00
PF01638	HxlR	1.00
PF12686	DUF3800	1.00
PF13435	Cytochrome_C554	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	31.00
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.00 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	74.00 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	74.00 %
Nitrospinia	class	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	72.00 %
Nitrospinales	order	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	72.00 %
Nitrospinaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	72.00 %
Nitrospina	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1.00 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10025574	All Organisms → cellular organisms → Bacteria → Proteobacteria	3172	Open in IMG/M
3300002912\|JGI25386J43895_10096266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300005166\|Ga0066674_10388424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300005171\|Ga0066677_10187542	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300005172\|Ga0066683_10092671	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300005172\|Ga0066683_10123887	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300005172\|Ga0066683_10443874	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M
3300005174\|Ga0066680_10193328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1284	Open in IMG/M
3300005175\|Ga0066673_10115324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1459	Open in IMG/M
3300005175\|Ga0066673_10152069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1289	Open in IMG/M
3300005175\|Ga0066673_10384149	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005177\|Ga0066690_10097540	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300005187\|Ga0066675_10849074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300005447\|Ga0066689_10113307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1572	Open in IMG/M
3300005451\|Ga0066681_10244558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1086	Open in IMG/M
3300005540\|Ga0066697_10115785	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300005552\|Ga0066701_10388568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	863	Open in IMG/M
3300005554\|Ga0066661_10215331	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005555\|Ga0066692_10066550	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300005555\|Ga0066692_10068765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2024	Open in IMG/M
3300005555\|Ga0066692_10873164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300005556\|Ga0066707_10990884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300005558\|Ga0066698_10795010	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300005559\|Ga0066700_10133076	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300005559\|Ga0066700_10188015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1421	Open in IMG/M
3300005569\|Ga0066705_10057160	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300005587\|Ga0066654_10188111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1068	Open in IMG/M
3300005598\|Ga0066706_10337797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1192	Open in IMG/M
3300006031\|Ga0066651_10023369	All Organisms → cellular organisms → Bacteria	2693	Open in IMG/M
3300006034\|Ga0066656_10830921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300006797\|Ga0066659_10818118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300009012\|Ga0066710_101400790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1083	Open in IMG/M
3300009137\|Ga0066709_101451417	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300010304\|Ga0134088_10014170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3449	Open in IMG/M
3300010304\|Ga0134088_10270167	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300010325\|Ga0134064_10296509	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300010333\|Ga0134080_10034635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1937	Open in IMG/M
3300010335\|Ga0134063_10631827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300010337\|Ga0134062_10159977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1007	Open in IMG/M
3300012198\|Ga0137364_10501990	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	912	Open in IMG/M
3300012198\|Ga0137364_10902103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300012199\|Ga0137383_10209763	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300012200\|Ga0137382_10136219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1654	Open in IMG/M
3300012201\|Ga0137365_10075512	All Organisms → cellular organisms → Bacteria	2542	Open in IMG/M
3300012202\|Ga0137363_10651483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	890	Open in IMG/M
3300012205\|Ga0137362_10369558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1242	Open in IMG/M
3300012206\|Ga0137380_10064029	All Organisms → cellular organisms → Bacteria	3364	Open in IMG/M
3300012207\|Ga0137381_10941661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	746	Open in IMG/M
3300012210\|Ga0137378_11377059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300012211\|Ga0137377_11481222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300012359\|Ga0137385_11096825	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300012361\|Ga0137360_10811042	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300012362\|Ga0137361_10435950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1204	Open in IMG/M
3300012402\|Ga0134059_1317827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300012409\|Ga0134045_1162578	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300012582\|Ga0137358_10044939	All Organisms → cellular organisms → Bacteria	2932	Open in IMG/M
3300012923\|Ga0137359_10255514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1563	Open in IMG/M
3300012927\|Ga0137416_10778544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	845	Open in IMG/M
3300012929\|Ga0137404_10424871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1176	Open in IMG/M
3300012929\|Ga0137404_10534981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1048	Open in IMG/M
3300012975\|Ga0134110_10359931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300014154\|Ga0134075_10050055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1724	Open in IMG/M
3300015245\|Ga0137409_10696915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	850	Open in IMG/M
3300017656\|Ga0134112_10274773	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300017656\|Ga0134112_10291392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	654	Open in IMG/M
3300017657\|Ga0134074_1243713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645	Open in IMG/M
3300017659\|Ga0134083_10482393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300018431\|Ga0066655_10307816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1032	Open in IMG/M
3300018431\|Ga0066655_10429906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	871	Open in IMG/M
3300018431\|Ga0066655_10896211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300018433\|Ga0066667_10071713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2194	Open in IMG/M
3300018433\|Ga0066667_11651620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300018482\|Ga0066669_11399529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	634	Open in IMG/M
3300026296\|Ga0209235_1144697	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300026297\|Ga0209237_1033059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2800	Open in IMG/M
3300026298\|Ga0209236_1128056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1110	Open in IMG/M
3300026298\|Ga0209236_1297895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300026307\|Ga0209469_1012235	All Organisms → cellular organisms → Bacteria	3187	Open in IMG/M
3300026307\|Ga0209469_1027454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1940	Open in IMG/M
3300026313\|Ga0209761_1122569	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300026314\|Ga0209268_1110495	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300026324\|Ga0209470_1015915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4238	Open in IMG/M
3300026326\|Ga0209801_1028432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2665	Open in IMG/M
3300026327\|Ga0209266_1009162	All Organisms → cellular organisms → Bacteria	5798	Open in IMG/M
3300026327\|Ga0209266_1021550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3560	Open in IMG/M
3300026328\|Ga0209802_1052554	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2007	Open in IMG/M
3300026332\|Ga0209803_1031407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2508	Open in IMG/M
3300026332\|Ga0209803_1085110	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300026333\|Ga0209158_1056521	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1585	Open in IMG/M
3300026334\|Ga0209377_1142016	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	925	Open in IMG/M
3300026334\|Ga0209377_1159979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	837	Open in IMG/M
3300026343\|Ga0209159_1024403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3337	Open in IMG/M
3300026528\|Ga0209378_1107153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1224	Open in IMG/M
3300026530\|Ga0209807_1015355	All Organisms → cellular organisms → Bacteria	3759	Open in IMG/M
3300026532\|Ga0209160_1033604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3194	Open in IMG/M
3300026547\|Ga0209156_10059272	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1998	Open in IMG/M
3300026548\|Ga0209161_10015171	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	5670	Open in IMG/M
3300026548\|Ga0209161_10020387	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4765	Open in IMG/M
3300027748\|Ga0209689_1094710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1553	Open in IMG/M
3300027748\|Ga0209689_1094786	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.00%
Loam	Environmental → Terrestrial → Soil → Loam	4.00%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	62.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	47.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	15.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.00%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_100255743	3300002908	Grasslands Soil	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
JGI25386J43895_100962662	3300002912	Grasslands Soil	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVVRGGASLHVSELKPGDVVQA
Ga0066674_103884241	3300005166	Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAE
Ga0066677_101875422	3300005171	Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0066683_100926712	3300005172	Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETQ*
Ga0066683_101238872	3300005172	Soil	MKRSLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0066683_104438742	3300005172	Soil	MKRLARAGALAAVLLLPAAFASAQAEESHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0066680_101933281	3300005174	Soil	RLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0066673_101153242	3300005175	Soil	MKRSLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAE
Ga0066673_101520691	3300005175	Soil	MKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0066673_103841492	3300005175	Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYAVHLGGLDLLTGVGEALRVVYIRTPETTVVRGGGSRHGREIKAGDVIEADCRLTDAGLVAERIEQRETP*
Ga0066690_100975403	3300005177	Soil	LVQAAVIAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLITGVGYALRLVHIRTPETTVVRGGGSRHGREIKAGDVIEADCRLTDVGLVAERIEQRETP*
Ga0066675_108490742	3300005187	Soil	MKRSLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPESTVVRGGGSLHVGEIKPGDVIEADCRLTD
Ga0066689_101133071	3300005447	Soil	RLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0066681_102445581	3300005451	Soil	MKRSLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETR*
Ga0066697_101157852	3300005540	Soil	MKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVRADCRLTDTGLVAERIEQRETR*
Ga0066701_103885682	3300005552	Soil	MRLLARAVALATVLLLPAAFASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDAGLIAERIEQRDTR*
Ga0066661_102153312	3300005554	Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0066692_100665502	3300005555	Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVVRGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0066692_100687651	3300005555	Soil	LLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0066692_108731641	3300005555	Soil	MKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHNVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTD
Ga0066707_109908841	3300005556	Soil	PPDGTARRAHLTRSDHFDSSGPMKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHNVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0066698_107950102	3300005558	Soil	MKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDTGLVAE
Ga0066700_101330763	3300005559	Soil	LAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0066700_101880152	3300005559	Soil	LAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0066705_100571602	3300005569	Soil	MKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDAGLIAERIEQRDTR*
Ga0066654_101881111	3300005587	Soil	MKRSLVHVAVIAAVCLLPVAFATAQAEEPHTYRGTVYKVHAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAERIEQRDTR*
Ga0066706_103377972	3300005598	Soil	MRLLARAVALATVLLLPAAFASAQAEEPHAYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDAGLIAERIEQRDTR*
Ga0066651_100233692	3300006031	Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVHLGGFDLLTGVGEALRVVYIRTPETTVVRGGGSRHGREIKAGDVIEADCRLTDAGLVAERIEQRETP*
Ga0066656_108309211	3300006034	Soil	GTARRAHLTRSDHFDSSGPMKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0066659_108181181	3300006797	Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETR*
Ga0066710_1014007902	3300009012	Grasslands Soil	MKRSLVQAVAIAAVCLLPVAFATAQAEEPHTYRGTVYAVHLGGLDLLTGVGEALRVVYIRTPETTVVRGGGSRHGREIKAGDVIEADCRLTDAGLVAERIEQRETP
Ga0066709_1014514172	3300009137	Grasslands Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYAVHLGGFDLLTGVGEALRVVYIRTPETTVVRGGGSRHGREIKAGDVIEADCRLTDAGLVAERIEQRETP*
Ga0134088_100141702	3300010304	Grasslands Soil	MKRSLVPAAAIAAVLLLPAAFASAQAEESHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGVSLHVSELKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0134088_102701672	3300010304	Grasslands Soil	VAVSLLAAAAAPAGADEPQTYRGTVYAVQLGGLDLLTGVGYALRVVHIRTPETTVFRGGGSLHVSEIKPGDVIEADCRLTDAGLVAERIEQRDTR*
Ga0134064_102965092	3300010325	Grasslands Soil	MKRSLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETQ*
Ga0134080_100346351	3300010333	Grasslands Soil	MRLLARAVALATVLLLPAAFASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0134063_106318271	3300010335	Grasslands Soil	LATVLLLPAAFASAQAEEPHAYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0134062_101599772	3300010337	Grasslands Soil	CLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0137364_105019902	3300012198	Vadose Zone Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPRTYRGTVYAVHLGGLDLLTGVGEALRVVYIRTPETTVVRGGGSRHGREIKAGDVIEADCRLTDAGLVAERIEQRETR*
Ga0137364_109021032	3300012198	Vadose Zone Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVRGGGSRHGREIKAGDVIEADCRLTDAGLVA
Ga0137383_102097632	3300012199	Vadose Zone Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0137382_101362191	3300012200	Vadose Zone Soil	MTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETR*
Ga0137365_100755122	3300012201	Vadose Zone Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVRGGGSLHVGELKPGDVIAADCRLTDTGLVAERIEQRETR*
Ga0137363_106514831	3300012202	Vadose Zone Soil	SAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0137362_103695582	3300012205	Vadose Zone Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGVSLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0137380_100640292	3300012206	Vadose Zone Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETQ*
Ga0137381_109416612	3300012207	Vadose Zone Soil	PAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0137378_113770592	3300012210	Vadose Zone Soil	SAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETR*
Ga0137377_114812222	3300012211	Vadose Zone Soil	ALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0137385_110968251	3300012359	Vadose Zone Soil	AFASAQAEEPHTYRGTVHAVQPGALDLVTGVGYALRLVHIRTPETTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETR*
Ga0137360_108110422	3300012361	Vadose Zone Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGVSLNVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0137361_104359502	3300012362	Vadose Zone Soil	LPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGVSLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0134059_13178271	3300012402	Grasslands Soil	LLLPAAFASAQAEESHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0134045_11625782	3300012409	Grasslands Soil	MKRSLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAE
Ga0137358_100449392	3300012582	Vadose Zone Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGVSLHVSQLKPGDVVRADCRLTDTGLVAERIEQRDTR*
Ga0137359_102555143	3300012923	Vadose Zone Soil	SAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGVSLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0137416_107785441	3300012927	Vadose Zone Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR*
Ga0137404_104248711	3300012929	Vadose Zone Soil	MKRLARAVAFATVLLLPTAFASAQAEEPHTYRGTVHAVQPGALDLVTGVGYALRVVHIRTPQTTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETR*
Ga0137404_105349812	3300012929	Vadose Zone Soil	MKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGGASLHVSELKPGDVVQADCRLTDTGIIAERIEQRDTR*
Ga0134110_103599311	3300012975	Grasslands Soil	AAAPAGADEPQTYRGTVYAVQLGGLDLLTGVGYALRVVHIRTPETTVVRGGGSLHVSEIKPGDVIEADCRLTDAGLVAERIEQRDTR*
Ga0134075_100500552	3300014154	Grasslands Soil	MKRLARAGALAAVLLLPAAFASAQAEESHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSELKPGDVVQADCRLTDAGLIAERIEQRDTR*
Ga0137409_106969152	3300015245	Vadose Zone Soil	MKRLARVAALAAVALLPAAFASAQAEESHTYRGTVHAVQPGALDLITGVGYALRVVHIRTPQTTVVARGGVSLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR*
Ga0134112_102747732	3300017656	Grasslands Soil	MKRLARAGALAAVLLLPAAFASAQAEESHTYRGTVHAVRPGALDLVTGVGYALRVVHIRTPQTTVVARGGVSLHVSELKPGDVVRGDCRLTDTGLVAERIEQRETR
Ga0134112_102913921	3300017656	Grasslands Soil	MKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0134074_12437131	3300017657	Grasslands Soil	MKRLARAGALAAVLLLPAAFASAQAEESHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVQADCRLTDAGLVAERIEQRDTR
Ga0134083_104823932	3300017659	Grasslands Soil	SLLAAAAAPAGADEPQTYRGTVYAVQLGGLDLLTGVGYALRVVHIRTPETTVVRGGGSLRVSEIKPGDVIQADCRLTDAGLVAERIEQRDTR
Ga0066655_103078162	3300018431	Grasslands Soil	PLGSAMKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR
Ga0066655_104299062	3300018431	Grasslands Soil	MQRCLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0066655_108962111	3300018431	Grasslands Soil	GASSLLAAAAAKARADEADTYRGTVYAAQLGGIDLLPGVGYALPVVHIRTPETTVVRGGGSLRVSEIKPGDVIEADCRLTDAGLVAERIEQRDTR
Ga0066667_100717133	3300018433	Grasslands Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETR
Ga0066667_116516201	3300018433	Grasslands Soil	MRLLARAVALATVLLLPAAFASAQAEEPHAYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDAGLIAERIEQRDTR
Ga0066669_113995291	3300018482	Grasslands Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYAVHLGGLDLLTGVGEALRVVYIRTPETTVVRGGGSRHGREIKAGDVIEADCRLTDAGLVAERIEQRETP
Ga0209235_11446972	3300026296	Grasslands Soil	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVVRGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0209237_10330593	3300026297	Grasslands Soil	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR
Ga0209236_11280562	3300026298	Grasslands Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVVRGGASLHASELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0209236_12978952	3300026298	Grasslands Soil	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRHGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR
Ga0209469_10122355	3300026307	Soil	TAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0209469_10274541	3300026307	Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQ
Ga0209761_11225692	3300026313	Grasslands Soil	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETQ
Ga0209268_11104952	3300026314	Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0209470_10159152	3300026324	Soil	MKRLARAGALAAVLLLPAAFASAQAEESHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR
Ga0209801_10284322	3300026326	Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR
Ga0209266_10091629	3300026327	Soil	SLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETR
Ga0209266_10215504	3300026327	Soil	MKRSLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVA
Ga0209802_10525542	3300026328	Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0209803_10314074	3300026332	Soil	LPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR
Ga0209803_10851102	3300026332	Soil	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0209158_10565212	3300026333	Soil	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVRADCRLTEAGLVAERIEQQETR
Ga0209377_11420161	3300026334	Soil	MSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVVRGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0209377_11599792	3300026334	Soil	MKRSLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0209159_10244032	3300026343	Soil	MKRSLVQAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPEKTVVARGGVSLHVSELKPGDVVRADCRLTDTGLVAERIEQRETQ
Ga0209378_11071531	3300026528	Soil	SPLVSAMTRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR
Ga0209807_10153552	3300026530	Soil	MKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHNVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDAGLIAERIEQRDTR
Ga0209160_10336042	3300026532	Soil	MKRLARAGALAAVLLLPAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVRADCRLTEAGLVAERIEEQETR
Ga0209156_100592721	3300026547	Soil	MKRSLVPAAAIAAVCLLPVAFATAQAEEPHTYRGTVYKVQAGALDLVTGVGYALRLVHIRTPETTVVAHGGAALHVSELKPGDVVQADCRLTDTGL
Ga0209161_100151719	3300026548	Soil	LAAVALLPAAASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCRLTDAGLIAERIEQRDTR
Ga0209161_100203871	3300026548	Soil	MKHLARVVALAAVALLPAAASAQAEEPHTYRGTVHTVQPGALDLITGVGYALRVVHIRTPATTVVARGSASLHVSELKPGDVVQADCR
Ga0209689_10947103	3300027748	Soil	PAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPETTVVARGGASLHVSELKPGDVVQADCRLTDTGLVAERIEQRETR
Ga0209689_10947861	3300027748	Soil	PAAFASAQAEEPHTYRGTVHAVRPGALDLVTGVGYALRLVHIRTPATTVVARGGASLHVSQLKPGDVVRADCRLTEAGLVAERIEEQETR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104809

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences