NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104750

Metagenome / Metatranscriptome Family F104750

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104750
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 80 residues
Representative Sequence MNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Number of Associated Samples 76
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.00 %
% of genes near scaffold ends (potentially truncated) 29.00 %
% of genes from short scaffolds (< 2000 bps) 82.00 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (92.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(63.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(71.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.71%    β-sheet: 21.52%    Coil/Unstructured: 41.77%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF10544T5orf172 3.00
PF00535Glycos_transf_2 1.00
PF06941NT5C 1.00
PF10902WYL_2 1.00
PF01327Pep_deformylase 1.00
PF13392HNH_3 1.00
PF14236DUF4338 1.00
PF027395_3_exonuc_N 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0242Peptide deformylaseTranslation, ribosomal structure and biogenesis [J] 1.00
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 1.00
COG45025'(3')-deoxyribonucleotidaseNucleotide transport and metabolism [F] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A92.00 %
All OrganismsrootAll Organisms8.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005527|Ga0068876_10290790Not Available930Open in IMG/M
3300005581|Ga0049081_10250024Not Available622Open in IMG/M
3300005582|Ga0049080_10067083All Organisms → Viruses → Predicted Viral1231Open in IMG/M
3300005584|Ga0049082_10057839Not Available1361Open in IMG/M
3300005662|Ga0078894_10728385Not Available873Open in IMG/M
3300005662|Ga0078894_11034648Not Available705Open in IMG/M
3300005805|Ga0079957_1039208All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes3026Open in IMG/M
3300006802|Ga0070749_10542114Not Available631Open in IMG/M
3300006875|Ga0075473_10255939Not Available708Open in IMG/M
3300007639|Ga0102865_1134193Not Available741Open in IMG/M
3300007973|Ga0105746_1073519Not Available1098Open in IMG/M
3300007974|Ga0105747_1274975Not Available567Open in IMG/M
3300007992|Ga0105748_10160574Not Available924Open in IMG/M
3300008107|Ga0114340_1084619Not Available1302Open in IMG/M
3300008110|Ga0114343_1049829Not Available1625Open in IMG/M
3300008110|Ga0114343_1134496Not Available810Open in IMG/M
3300008113|Ga0114346_1084040Not Available1494Open in IMG/M
3300008113|Ga0114346_1192529Not Available823Open in IMG/M
3300008116|Ga0114350_1017861Not Available2998Open in IMG/M
3300008120|Ga0114355_1042205All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2150Open in IMG/M
3300008120|Ga0114355_1062733Not Available1620Open in IMG/M
3300008267|Ga0114364_1036756Not Available1863Open in IMG/M
3300008448|Ga0114876_1034979Not Available2415Open in IMG/M
3300008448|Ga0114876_1241540Not Available569Open in IMG/M
3300008450|Ga0114880_1129504Not Available936Open in IMG/M
3300008450|Ga0114880_1154596Not Available821Open in IMG/M
3300008962|Ga0104242_1000921All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6076Open in IMG/M
3300009051|Ga0102864_1193220Not Available555Open in IMG/M
3300009059|Ga0102830_1217250Not Available559Open in IMG/M
3300009068|Ga0114973_10049423Not Available2486Open in IMG/M
3300009068|Ga0114973_10333410Not Available804Open in IMG/M
3300009158|Ga0114977_10538565Not Available636Open in IMG/M
3300009183|Ga0114974_10380031Not Available813Open in IMG/M
3300010354|Ga0129333_11159608Not Available643Open in IMG/M
3300011010|Ga0139557_1008450Not Available2074Open in IMG/M
3300012000|Ga0119951_1000256Not Available38802Open in IMG/M
3300012012|Ga0153799_1057385Not Available711Open in IMG/M
3300013004|Ga0164293_10684727Not Available658Open in IMG/M
3300013005|Ga0164292_10862775Not Available569Open in IMG/M
3300013295|Ga0170791_13678708Not Available557Open in IMG/M
3300013372|Ga0177922_10344223Not Available1175Open in IMG/M
3300013372|Ga0177922_11113430Not Available817Open in IMG/M
3300017707|Ga0181363_1087248Not Available530Open in IMG/M
3300017722|Ga0181347_1203904Not Available519Open in IMG/M
3300017723|Ga0181362_1020692All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1413Open in IMG/M
3300017723|Ga0181362_1087056Not Available627Open in IMG/M
3300017754|Ga0181344_1036585Not Available1490Open in IMG/M
3300017761|Ga0181356_1201221Not Available590Open in IMG/M
3300017766|Ga0181343_1034700Not Available1515Open in IMG/M
3300017766|Ga0181343_1114568Not Available760Open in IMG/M
3300017766|Ga0181343_1183030Not Available577Open in IMG/M
3300017774|Ga0181358_1056173Not Available1478Open in IMG/M
3300017774|Ga0181358_1201312Not Available651Open in IMG/M
3300017778|Ga0181349_1257539Not Available580Open in IMG/M
3300017778|Ga0181349_1301874Not Available519Open in IMG/M
3300017780|Ga0181346_1315642Not Available526Open in IMG/M
3300019784|Ga0181359_1243601Not Available550Open in IMG/M
3300020141|Ga0211732_1418448Not Available743Open in IMG/M
3300020159|Ga0211734_10110057Not Available874Open in IMG/M
3300020159|Ga0211734_11119706Not Available738Open in IMG/M
3300020160|Ga0211733_10329541Not Available2327Open in IMG/M
3300020161|Ga0211726_10701949Not Available1146Open in IMG/M
3300020161|Ga0211726_11075315Not Available507Open in IMG/M
3300020162|Ga0211735_11312473Not Available1060Open in IMG/M
3300020172|Ga0211729_10124824Not Available775Open in IMG/M
3300020172|Ga0211729_10125669All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1431Open in IMG/M
3300020172|Ga0211729_11102062Not Available504Open in IMG/M
3300020205|Ga0211731_10249598Not Available1862Open in IMG/M
3300022179|Ga0181353_1155650Not Available523Open in IMG/M
3300022407|Ga0181351_1275675Not Available508Open in IMG/M
3300022752|Ga0214917_10244882Not Available841Open in IMG/M
3300023174|Ga0214921_10000408Not Available81500Open in IMG/M
3300023174|Ga0214921_10299692Not Available896Open in IMG/M
3300027586|Ga0208966_1055906Not Available1122Open in IMG/M
3300027734|Ga0209087_1326093Not Available538Open in IMG/M
3300027736|Ga0209190_1000008All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales160406Open in IMG/M
3300027759|Ga0209296_1019775Not Available3852Open in IMG/M
3300027759|Ga0209296_1265165Not Available699Open in IMG/M
3300027805|Ga0209229_10424770Not Available574Open in IMG/M
3300027969|Ga0209191_1022539Not Available3102Open in IMG/M
3300031758|Ga0315907_10094929Not Available2560Open in IMG/M
3300031784|Ga0315899_10268741All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1696Open in IMG/M
3300031787|Ga0315900_10021562Not Available7451Open in IMG/M
3300031787|Ga0315900_10597815Not Available808Open in IMG/M
3300031857|Ga0315909_10105520Not Available2417Open in IMG/M
3300031857|Ga0315909_10170375Not Available1764Open in IMG/M
3300031857|Ga0315909_10629830Not Available710Open in IMG/M
3300031951|Ga0315904_10503610Not Available1067Open in IMG/M
3300031951|Ga0315904_11144018Not Available603Open in IMG/M
3300031951|Ga0315904_11403122Not Available521Open in IMG/M
3300032050|Ga0315906_11110565Not Available583Open in IMG/M
3300032092|Ga0315905_10870408Not Available774Open in IMG/M
3300032093|Ga0315902_10429476Not Available1181Open in IMG/M
3300032116|Ga0315903_10375183Not Available1168Open in IMG/M
3300033993|Ga0334994_0411309Not Available651Open in IMG/M
3300034062|Ga0334995_0026526Not Available5054Open in IMG/M
3300034103|Ga0335030_0046311Not Available3274Open in IMG/M
3300034105|Ga0335035_0314653Not Available919Open in IMG/M
3300034166|Ga0335016_0528964Not Available658Open in IMG/M
3300034356|Ga0335048_0499948Not Available582Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake20.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater17.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater14.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater11.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton9.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake9.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic4.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake4.00%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water3.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine3.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.00%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment1.00%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater1.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007639Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02EnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300007974Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2umEnvironmentalOpen in IMG/M
3300007992Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2umEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300008962Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5EnvironmentalOpen in IMG/M
3300009051Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02EnvironmentalOpen in IMG/M
3300009059Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300012000Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007AEnvironmentalOpen in IMG/M
3300012012Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027969Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034105Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127EnvironmentalOpen in IMG/M
3300034166Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068876_1029079023300005527Freshwater LakeMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0049081_1025002413300005581Freshwater LenticMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0049080_1006708333300005582Freshwater LenticMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTLRTSGLSEEFDGTTNVEIEIRKLYESSN*
Ga0049082_1005783933300005584Freshwater LenticMNNTLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN*
Ga0078894_1072838533300005662Freshwater LakeMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN*
Ga0078894_1103464833300005662Freshwater LakeGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0079957_103920843300005805LakeMNDKLQKILADAKVGKAEFDTGSYYVCSEGTMKTIIKSVVDACAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYENSN*
Ga0070749_1054211423300006802AqueousMQPLWRLHLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN*
Ga0075473_1025593923300006875AqueousMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSSGVPEDYNGTTNVEIEIRKLYESSN*
Ga0102865_113419323300007639EstuarineMNTKLQKILADAKIGKAEFPDLRNYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN*
Ga0105746_107351923300007973Estuary WaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0105747_127497523300007974Estuary WaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLENIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0105748_1016057413300007992Estuary WaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTN
Ga0114340_108461923300008107Freshwater, PlanktonLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0114343_104982913300008110Freshwater, PlanktonMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0114343_113449633300008110Freshwater, PlanktonMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0114346_108404053300008113Freshwater, PlanktonMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0114346_119252913300008113Freshwater, PlanktonLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0114350_101786153300008116Freshwater, PlanktonLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0114355_104220523300008120Freshwater, PlanktonMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0114355_106273353300008120Freshwater, PlanktonMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0114364_103675663300008267Freshwater, PlanktonMNNTLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYES
Ga0114876_103497943300008448Freshwater LakeMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0114876_124154023300008448Freshwater LakeMNNTLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0114880_112950423300008450Freshwater LakeMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0114880_115459613300008450Freshwater LakeMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGYTNVEKEIRK
Ga0104242_1000921143300008962FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0102864_119322023300009051EstuarineMNDKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAAEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0102830_121725013300009059EstuarineMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTN
Ga0114973_1004942373300009068Freshwater LakeLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0114973_1033341033300009068Freshwater LakeMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0114977_1053856513300009158Freshwater LakeMQPLWRLHLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0114974_1038003113300009183Freshwater LakePLWRLHLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN*
Ga0129333_1115960823300010354Freshwater To Marine Saline GradientHLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN*
Ga0139557_100845023300011010FreshwaterMNNTLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0119951_1000256243300012000FreshwaterLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSSGVPEDYNGTTNVEIEIRKLYESGN*
Ga0153799_105738523300012012FreshwaterMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAVEARNYTLRTSGLSEEFDGTTNVEIEIRKLYESSN*
Ga0164293_1068472723300013004FreshwaterLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0164292_1086277533300013005FreshwaterMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTLRTSGLSEEFDGITNVEIEIRKLHEDSN*
Ga0170791_1367870823300013295FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN*
Ga0177922_1034422323300013372FreshwaterMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTLRTSGLSEEFDGTTNVEIEIRKLYESGN*
Ga0177922_1111343033300013372FreshwaterMNNKLQKILADAKIGKAEFDAGKYYVCSEGTLETIIKSVVELCAVEARRYTFRSNGVPEDYNGYTNVEKEIRKLYESSN*
Ga0181363_108724823300017707Freshwater LakeMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKLVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0181347_120390423300017722Freshwater LakeMNNTLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESGN
Ga0181362_102069253300017723Freshwater LakeMNNTLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAVEARRYTFRSNGISEDYNGTTNVEKEIRKLYESGN
Ga0181362_108705613300017723Freshwater LakeMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVDPF
Ga0181344_103658553300017754Freshwater LakeMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEKEIRKLYESSN
Ga0181356_120122123300017761Freshwater LakeMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGYTNVEKEIRKLYESGN
Ga0181343_103470043300017766Freshwater LakeMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGTTNVEIEIRKLYEDTNVRKACRTKSC
Ga0181343_111456833300017766Freshwater LakeMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0181343_118303013300017766Freshwater LakePLWRLHLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN
Ga0181358_105617313300017774Freshwater LakeLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVE
Ga0181358_120131213300017774Freshwater LakeLQKILADAKIGKAEFDAGKYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0181349_125753913300017778Freshwater LakeVPRKVSMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0181349_130187423300017778Freshwater LakeHKGLKIPRFGLLVQLQLLVPRKVNMNNKLQKILADTKIGKAEFDAGSYYVCSEGTLETIIKSVVELCAEKARNYTLTTSGLSEEFDGITNVEVEIRKLYESGN
Ga0181346_131564223300017780Freshwater LakeMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAVEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN
Ga0181359_124360113300019784Freshwater LakeMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0211732_141844813300020141FreshwaterMNDKLRKILADAKVGKAEFDTGSYYVCSEGTMKTIIKSVVDACADEARRYTFRSNGISEDYNGYTNVEKEIRKLYENSN
Ga0211734_1011005713300020159FreshwaterMNDKLQKILADAKVGKAEFDTGSYYVCSEGTMKTIIKSVVDACADEARRYTFRSNGISEDYNGYTNVEKEIRKLYENSN
Ga0211734_1111970613300020159FreshwaterMNDKLQKILADAKVGKAEFESGSYYVCSEGTMKTIIKSVVDACAEEARRYTFKSNGISEDYNGYTNVEKEIRKL
Ga0211733_1032954143300020160FreshwaterMNDKLQKILADAKVGKAEFDTGSYYVCSEGTMKTIIKSVVDACAEEARRYTFRANGISEDYNGYTNVEKEIRKLYENSN
Ga0211726_1070194923300020161FreshwaterMNITLQKILADAKIGKAEFDAGSYYVCSEGTLKTVLKSVVDACAEKARNHTLKSNGIPEDYNGYTNVEVEIRKLYEDSN
Ga0211726_1107531523300020161FreshwaterMNDKLQKILADAKVGKAEFDAGSYYVCSEGTMKTLIKSVVDACAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYENSN
Ga0211735_1131247343300020162FreshwaterMNDKLQKILADAKIGKAEFESGDYYVCSEGTLKTVLKSVVDACAEKARNHTLKSNGIPEDYNGYTNVEVEIRKLYEDSN
Ga0211729_1012482433300020172FreshwaterMNNTLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVELCAEKARNYTLTTSGLTEEFDGITNVEIEIRKLYENSN
Ga0211729_1012566943300020172FreshwaterMNDNLQKILADAKVGKAEFESGSYYVCSEGTMKTIIKSVVDACADEARRYTFRANGISEDYNGYTNVEKEIRKLYENSN
Ga0211729_1110206223300020172FreshwaterMNDKLQKILADAKVGKAEFESGSYYVCSEGTMKTIIKSVVDACAEKARNHTLKSNGIPEDYNGYTNVEVEIRKLYEDSN
Ga0211731_1024959823300020205FreshwaterMNDKLQKILADAKVGKAEFESGSYYVCSEGTMKTLIKSVVDACADEARRYTFRANGISEDYNGYTNVEKEIRKLYENSN
Ga0181353_115565013300022179Freshwater LakeADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN
Ga0181351_127567523300022407Freshwater LakeMNNTLQKILADAKIGKAEFDAGKYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESGN
Ga0214917_1024488213300022752FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGT
Ga0214921_10000408993300023174FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0214921_1029969213300023174FreshwaterKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN
Ga0208966_105590643300027586Freshwater LenticMNNTLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGVPEDYNGYTNVEKEIRKLYESSN
Ga0209087_132609323300027734Freshwater LakeQRVMQPLWRLHLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0209190_10000082003300027736Freshwater LakeMRPLWRLHLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0209296_1019775103300027759Freshwater LakeLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0209296_126516533300027759Freshwater LakeWVGYTLWHQRVMQPLWRLHLDYKEHMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN
Ga0209229_1042477013300027805Freshwater And SedimentTRNSMNDKLQKILADAKVGKAEFDTGSYYVCSEGTMKTIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0209191_102253933300027969Freshwater LakeMQPLWRLHLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0315907_1009492913300031758FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN
Ga0315899_1026874163300031784FreshwaterMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGVPEDYNGYTNVEKEIRKLYESSN
Ga0315900_1002156293300031787FreshwaterMNDKLQKILADAKVGKAEFDTGSYYVCSEGTMKTLIKSVVDACADEARRYTFRSNGISEDYNGYTNVEKEIRKLYENSN
Ga0315900_1059781533300031787FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0315909_1010552013300031857FreshwaterQWCSRSKCSYTRNSMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN
Ga0315909_1017037523300031857FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN
Ga0315909_1062983013300031857FreshwaterMNNKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN
Ga0315904_1050361023300031951FreshwaterMNDKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRNNGISEDYNGYTNVEKEIRKLYESSN
Ga0315904_1114401813300031951FreshwaterMRPLWRLHLDYKEHMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN
Ga0315904_1140312213300031951FreshwaterMNDKLQKILADAKVGKAEFPDLRNYYVCSEGTLETIIKSVVELCAEEARNYTLRTSGLSEDFSGLTNVEVEIRKLYE
Ga0315906_1111056523300032050FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGTTNVEI
Ga0315905_1087040823300032092FreshwaterMNNKLQKILADAKIGKAEFDAGKYYVCSEGTLETIIKSVVELCAVEARRYTFRSNGVPEDYNGYTNVEKEIRKLYESSN
Ga0315902_1042947613300032093FreshwaterCGLGSGCTWIIRNSMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDACAEEARRYTFRSNGISEDYNGTTNVEIEIRKLYESSN
Ga0315903_1037518333300032116FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGYTNVEKEIRKLYESSN
Ga0334994_0411309_262_5013300033993FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN
Ga0334995_0026526_2571_28103300034062FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGISEDYNGITNVEIEIRKLYESSN
Ga0335030_0046311_714_9533300034103FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARRYTFRSNGVSEDYNGTTNVEIEIRKLYESSN
Ga0335035_0314653_1_2163300034105FreshwaterMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCAEEARNYTLRTSGLSEEFDGITNVEIEIR
Ga0335016_0528964_26_2833300034166FreshwaterLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARRYTFRSNGISEDYNGTTNVEIEIRKLYESGN
Ga0335048_0499948_3_2843300034356FreshwaterMRPLWRLHLDYKENMNTKLQKILADAKIGKAEFDAGSYYVCSEGTLETIIKSVVDLCADEARNYTLRTSGLSEEFDGITNVEIEIRKLYESGN


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