Metagenome Family F104743

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104743
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	77 residues
Representative Sequence	PVADPSFINERVADLPQTAAMKALERQSQAMPKGEDTQGPILEQIDWQASTNRPIPPALRQEVAKSRSGTNGD
Number of Associated Samples	65
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	95.00 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (37.000 % of family members)
Environment Ontology (ENVO)	Unclassified (45.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.57% β-sheet: 0.00% Coil/Unstructured: 57.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF13646	HEAT_2	5.00
PF04978	DUF664	5.00
PF00005	ABC_tran	3.00
PF00126	HTH_1	3.00
PF13602	ADH_zinc_N_2	2.00
PF13565	HTH_32	2.00
PF03636	Glyco_hydro_65N	2.00
PF03466	LysR_substrate	2.00
PF13191	AAA_16	1.00
PF12802	MarR_2	1.00
PF00583	Acetyltransf_1	1.00
PF08281	Sigma70_r4_2	1.00
PF00578	AhpC-TSA	1.00
PF01243	Putative_PNPOx	1.00
PF01656	CbiA	1.00
PF08021	FAD_binding_9	1.00
PF13280	WYL	1.00
PF04191	PEMT	1.00
PF08327	AHSA1	1.00
PF00872	Transposase_mut	1.00
PF13810	DUF4185	1.00
PF13424	TPR_12	1.00
PF13230	GATase_4	1.00
PF08044	DUF1707	1.00
PF10009	DUF2252	1.00
PF13577	SnoaL_4	1.00
PF04185	Phosphoesterase	1.00
PF00326	Peptidase_S9	1.00
PF02515	CoA_transf_3	1.00
PF00300	His_Phos_1	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0543	NAD(P)H-flavin reductase	Energy production and conversion [C]	2.00
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	2.00
COG1018	Flavodoxin/ferredoxin--NADP reductase	Energy production and conversion [C]	1.00
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.00
COG2375	NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains	Inorganic ion transport and metabolism [P]	1.00
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.00
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.00 %
Unclassified	root	N/A	48.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.00 %
Unclassified	root	N/A	48.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.00 %
Unclassified	root	N/A	48.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.00 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.00 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.00 %
Actinobacteria bacterium 13_2_20CM_2_72_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_72_6	1.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.00 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.00 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.00 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.00 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.00 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.00 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2.00 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	1.00 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.00 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.00 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.00 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1.00 %
Actinobacteria bacterium 13_2_20CM_2_72_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_72_6	1.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.00 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.00 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.00 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1.00 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.00 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	1.00 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	1.00 %
Actinobacteria bacterium 13_2_20CM_2_72_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_72_6	1.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.00 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.00 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	1.00 %
Microlunatus elymi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus elymi	1.00 %
Actinoplanes subtropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes subtropicus	1.00 %
Blastococcus atacamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus atacamensis	1.00 %
Streptomyces violaceusniger group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	1.00 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.00 %
Actinobacteria bacterium 13_2_20CM_2_72_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_72_6	1.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.00 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.00 %
Actinomadura sp. CNU-125	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	1.00 %
Streptomyces malaysiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces malaysiensis	1.00 %
Microlunatus elymi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus elymi	1.00 %
Actinoplanes subtropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes subtropicus	1.00 %
Blastococcus atacamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus atacamensis	1.00 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.00 %
Actinobacteria bacterium 13_2_20CM_2_72_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_72_6	1.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.00 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573003\|GZIR7W401DYVM5	Not Available	516	Open in IMG/M
3300002907\|JGI25613J43889_10131335	Not Available	639	Open in IMG/M
3300005332\|Ga0066388_100120932	All Organisms → cellular organisms → Bacteria	3140	Open in IMG/M
3300005332\|Ga0066388_103597703	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005332\|Ga0066388_104961186	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005332\|Ga0066388_107161735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300005445\|Ga0070708_102262716	Not Available	501	Open in IMG/M
3300005458\|Ga0070681_11576041	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005518\|Ga0070699_100329340	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300005529\|Ga0070741_10861837	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005713\|Ga0066905_100658316	Not Available	894	Open in IMG/M
3300005764\|Ga0066903_100215462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2901	Open in IMG/M
3300005764\|Ga0066903_100686676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1800	Open in IMG/M
3300005764\|Ga0066903_104844227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	715	Open in IMG/M
3300006804\|Ga0079221_10130197	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300009162\|Ga0075423_10446272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1359	Open in IMG/M
3300010046\|Ga0126384_10003837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	9159	Open in IMG/M
3300010046\|Ga0126384_10708940	Not Available	892	Open in IMG/M
3300010048\|Ga0126373_10662253	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1100	Open in IMG/M
3300010048\|Ga0126373_11111091	Not Available	856	Open in IMG/M
3300010048\|Ga0126373_11635766	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300010048\|Ga0126373_12468519	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300010048\|Ga0126373_13290935	All Organisms → cellular organisms → Bacteria → Terrabacteria group	503	Open in IMG/M
3300010358\|Ga0126370_11597682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300010359\|Ga0126376_12029361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus atacamensis	617	Open in IMG/M
3300010359\|Ga0126376_13187992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300010360\|Ga0126372_10118286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2040	Open in IMG/M
3300010360\|Ga0126372_12804985	All Organisms → cellular organisms → Bacteria → Terrabacteria group	539	Open in IMG/M
3300010361\|Ga0126378_10273127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1789	Open in IMG/M
3300010361\|Ga0126378_12349122	Not Available	609	Open in IMG/M
3300010361\|Ga0126378_13236607	Not Available	518	Open in IMG/M
3300010362\|Ga0126377_10724321	Not Available	1049	Open in IMG/M
3300010366\|Ga0126379_10764481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1064	Open in IMG/M
3300010366\|Ga0126379_11816757	Not Available	713	Open in IMG/M
3300010376\|Ga0126381_100579836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1593	Open in IMG/M
3300010376\|Ga0126381_100609185	Not Available	1554	Open in IMG/M
3300010376\|Ga0126381_100832009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1326	Open in IMG/M
3300010376\|Ga0126381_101543640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	960	Open in IMG/M
3300010376\|Ga0126381_101575345	All Organisms → cellular organisms → Bacteria → Terrabacteria group	949	Open in IMG/M
3300010376\|Ga0126381_101689119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	915	Open in IMG/M
3300010376\|Ga0126381_102078193	Not Available	818	Open in IMG/M
3300010376\|Ga0126381_102250588	Not Available	783	Open in IMG/M
3300010376\|Ga0126381_102344989	Not Available	766	Open in IMG/M
3300010376\|Ga0126381_102795071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300010376\|Ga0126381_102800361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300010376\|Ga0126381_103653993	Not Available	602	Open in IMG/M
3300010396\|Ga0134126_11569193	Not Available	725	Open in IMG/M
3300010398\|Ga0126383_12322262	Not Available	622	Open in IMG/M
3300010398\|Ga0126383_12976388	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012189\|Ga0137388_12036011	Not Available	502	Open in IMG/M
3300012927\|Ga0137416_12147925	Not Available	513	Open in IMG/M
3300012948\|Ga0126375_11128110	Not Available	648	Open in IMG/M
3300012971\|Ga0126369_11551381	Not Available	752	Open in IMG/M
3300012971\|Ga0126369_13576361	Not Available	509	Open in IMG/M
3300013296\|Ga0157374_12655464	Not Available	528	Open in IMG/M
3300015264\|Ga0137403_11265325	Not Available	584	Open in IMG/M
3300016270\|Ga0182036_11264933	All Organisms → cellular organisms → Bacteria → Terrabacteria group	615	Open in IMG/M
3300016319\|Ga0182033_11829601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300016341\|Ga0182035_10394628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300016387\|Ga0182040_10102705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces malaysiensis	1944	Open in IMG/M
3300016404\|Ga0182037_10814573	Not Available	806	Open in IMG/M
3300016404\|Ga0182037_11575874	Not Available	584	Open in IMG/M
3300016422\|Ga0182039_10569695	All Organisms → cellular organisms → Bacteria → Terrabacteria group	986	Open in IMG/M
3300016445\|Ga0182038_10316421	Not Available	1281	Open in IMG/M
3300016445\|Ga0182038_11952428	Not Available	531	Open in IMG/M
3300021560\|Ga0126371_12877627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	583	Open in IMG/M
3300021560\|Ga0126371_12891374	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300025929\|Ga0207664_10428395	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300026320\|Ga0209131_1007802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6743	Open in IMG/M
3300031680\|Ga0318574_10208661	Not Available	1123	Open in IMG/M
3300031680\|Ga0318574_10674065	Not Available	606	Open in IMG/M
3300031719\|Ga0306917_10496048	Not Available	959	Open in IMG/M
3300031764\|Ga0318535_10542467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300031777\|Ga0318543_10495747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_72_6	547	Open in IMG/M
3300031794\|Ga0318503_10214004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300031795\|Ga0318557_10267611	All Organisms → cellular organisms → Bacteria → Terrabacteria group	783	Open in IMG/M
3300031799\|Ga0318565_10537691	Not Available	563	Open in IMG/M
3300031819\|Ga0318568_10745807	Not Available	608	Open in IMG/M
3300031832\|Ga0318499_10042792	Not Available	1673	Open in IMG/M
3300031835\|Ga0318517_10482548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus elymi	559	Open in IMG/M
3300031879\|Ga0306919_10461502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes subtropicus	978	Open in IMG/M
3300031894\|Ga0318522_10273409	Not Available	640	Open in IMG/M
3300031896\|Ga0318551_10836500	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031910\|Ga0306923_11358747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300031912\|Ga0306921_10954705	All Organisms → cellular organisms → Bacteria → Terrabacteria group	970	Open in IMG/M
3300031941\|Ga0310912_11361722	Not Available	537	Open in IMG/M
3300031954\|Ga0306926_11678875	Not Available	726	Open in IMG/M
3300031959\|Ga0318530_10044170	Not Available	1654	Open in IMG/M
3300032008\|Ga0318562_10465026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300032008\|Ga0318562_10892770	Not Available	507	Open in IMG/M
3300032009\|Ga0318563_10714942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300032041\|Ga0318549_10523769	Not Available	533	Open in IMG/M
3300032052\|Ga0318506_10572473	Not Available	500	Open in IMG/M
3300032055\|Ga0318575_10522370	Not Available	603	Open in IMG/M
3300032064\|Ga0318510_10179114	Not Available	849	Open in IMG/M
3300032068\|Ga0318553_10075076	Not Available	1698	Open in IMG/M
3300032076\|Ga0306924_12025921	Not Available	593	Open in IMG/M
3300032076\|Ga0306924_12277912	Not Available	550	Open in IMG/M
3300032261\|Ga0306920_102477307	Not Available	714	Open in IMG/M
3300032261\|Ga0306920_104381762	Not Available	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.00%
Host-Associated	Host-Associated	2.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.00%
Plants	Host-Associated → Plants	2.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.00%
Loam	Environmental → Terrestrial → Soil → Loam	12.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.00%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	37.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.00%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573003	Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE2_00407910	2189573003	Grass Soil	DLQPFDLVASPPFIDERVAGLPQTAAMIALERLSAAMPGGEDTQGPILEQIDWQVTTNRPIPAALKQEVARARSAAGGD
JGI25613J43889_101313351	3300002907	Grasslands Soil	QASQLTSADLQPFNSVADPSFINERVADLPQTAAIKALERQSQAMPKGEDTQGPILEQIDWQASTNRPIPLALKRELAKSRSGAGHD*
Ga0066388_1001209324	3300005332	Tropical Forest Soil	AADLTPFNLVANPAFINERVADLPQTAAVRALERQSMNMPKGEDTQGPILEQIDWLATTHRPVPPALKRELAQARSRTGGDD*
Ga0066388_1035977031	3300005332	Tropical Forest Soil	NQASALTSADLMPFTLVAAPSFIDERVADLPQTPAIKALERASRAMPKGQDTQGPILEQMDWLATTSRPLPAALRLELAKARSGAGG*
Ga0066388_1049611862	3300005332	Tropical Forest Soil	ADLTPFTPVADPSFINEKVADLPQTAAMKALERQSRAMPKGEDTQGPILEQIDWQATVNRPLPPALRREVARARAEADGG*
Ga0066388_1071617351	3300005332	Tropical Forest Soil	QLTAADLAPFSPVADPSFINERVAGLAPTAQIQALIRQSQAMPKGEDTQGPILEQIDWQATTNRPVPTAVTREVAKAPSGADGD*
Ga0070708_1022627162	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	INERVADLPQTAATKALERQSQAMAKGEDSQGPILEQIDWQATTNRPIPLALKRELAKSRSGAGGD*
Ga0070681_115760412	3300005458	Corn Rhizosphere	DLEPFNPVADPSFINERVADLPQTAATKALERQSQAMAKGEDSQGPILEQIDWQATTNRPIPLALKRELAKSRSGAGGD*
Ga0070699_1003293404	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DLKPFNPVADPSFINERVASLPQTAAIKALERQSLAMPKGEDTQGPILEQIDWQASTSRPIPPALKQEVARSRSRAGGD*
Ga0070741_108618372	3300005529	Surface Soil	VAAPPFVDERVADLPQTAATKALERQSLAMPKGEDTQGPILEQIDWQATASRPVPRALLQEVARAAQNVDHDG*
Ga0066905_1006583162	3300005713	Tropical Forest Soil	PVADPSFINERVADLPQTAAMKALERQSQAMPKGEDTQGPILEQIDWQASTNRPIPPALRQEVAKSRSGTNGD*
Ga0066903_1002154621	3300005764	Tropical Forest Soil	QPFNMVADPSFINERVADLPQTAAIMALERQSRAMPKGEDTQGPILEQIDWQATTNRPVPAALRQEVAKARSSGAN*
Ga0066903_1006866761	3300005764	Tropical Forest Soil	ERVADLPQTAAIKALERQSRAMPKGEDTQGPILEQIDWQATTNRQIPPALRQEVAKSRSAAGGD*
Ga0066903_1048442271	3300005764	Tropical Forest Soil	ADLKPFTPVGDPSFINERVADLPQTAATKALERQSRAMPKGEDTQGPILEQIDWQASTSRPVPPALKQEVAKARSGADGDGD*
Ga0079221_101301971	3300006804	Agricultural Soil	LTSADLTPFTPVADPSFINEKVADLPQTAAMKALERQSRAMPKGEDAQGPILEQIDWQATTSRPLPPALRREVAKAQSAADGG*
Ga0075423_104462721	3300009162	Populus Rhizosphere	LTPFNLVADPSFINERVADLPQTAATKALERQSRAMPKGEDTQGPILEQIDWQASTNRPIPPALKQEVARSRNKTGGD*
Ga0126384_100038371	3300010046	Tropical Forest Soil	FDPVADPSFINERVADLPQTAAMKALERQSQAMPKGEDTQGPILEQIDWQASTNRPIPPALRQEVAKSRSGTNGD*
Ga0126384_107089401	3300010046	Tropical Forest Soil	PPFIEERVADLPQAGATQALIRQSKAMPKGEDTQGPILEQIDWQATTNRPIPQALKQELTKARSATTDDD*
Ga0126373_106622533	3300010048	Tropical Forest Soil	ELTSADLKPFDLVADPPFINEKVADLPQTAALKALERESREMPKGEDTQGPILEQIDWQATTNRSIPPALRREVAKSRSGKGGN*
Ga0126373_111110911	3300010048	Tropical Forest Soil	FDPVADPSFINERVADLPQTAAVRALERESKAMPKGEDTQGPILEQIDWQATTHRPIPPALKQELARARSVADRG*
Ga0126373_116357661	3300010048	Tropical Forest Soil	QASQLTPADLQPFNLVADPSFINERVADLTQTAATMALERLSLAMPKGEDTQGPILEQIDWQATTSRPIPLALRQEVARAQSAAAVN*
Ga0126373_124685191	3300010048	Tropical Forest Soil	QAAELTAADLEPFTPVAAPPFINETVAGLPQTKAMKALERQSRAMPKGEDTQGPILEQIDWQATTNRQIPPALRQEVAKSRSGAGGD*
Ga0126373_132909351	3300010048	Tropical Forest Soil	TMVADPSFINERVADLPQTAAIRALERQSLAMPKGEDTQGPILEQIDWQATTDRPIPRALLAEVARSRRGPRGRSAG*
Ga0126370_115976821	3300010358	Tropical Forest Soil	LTPADLQPFNPVADPSFINERVADLPQTTATKALERQSQAMPKGEDTQGPILEQIDWQASTNRPIPPALKQEVAKSLSAVGGD*
Ga0126376_120293611	3300010359	Tropical Forest Soil	TDPSFIDERVADLPQTAATKALELQSAAMPKGEDTQGPMLEQIDWQASTDRPVPAALKREVAKAPSRVDDD*
Ga0126376_131879921	3300010359	Tropical Forest Soil	ANPAFINERVADLPQTAAVRALERQSKNMPKGEDTQGPILEQIDWLATTHRPLPPALVRELAQARSRAAGDG*
Ga0126372_101182861	3300010360	Tropical Forest Soil	PFINEKVADLPQTAALKALERQSRAMPKGEDTQGPILEQIDWQATTSRSIPPALRREVAKSRSGADGG*
Ga0126372_128049851	3300010360	Tropical Forest Soil	VADPSFINERVADLPQTAAVKALERQSHAMPNGEDTQGPILEQIDWQATAGRPIPPALKQEVAKARSGAADGD*
Ga0126378_102731271	3300010361	Tropical Forest Soil	RVADLPQTAAVKALERQSQAMPKGEDTQGPILEQIDWQASTNRPIPPALKQEVAKSLRGAGGD*
Ga0126378_123491221	3300010361	Tropical Forest Soil	LVADPSFINERVADLPQTAAMKALERLSKTMPGGEDTQGPILEQIDWQATTGRPIPAALKQEVAKSRSGAGGD*
Ga0126378_132366072	3300010361	Tropical Forest Soil	SFINERVADLPQTAATKALERQSQAMPKGEDTQGPILEQIDWQASTNRPIPPALRQEVAKSRSGTNGD*
Ga0126377_107243211	3300010362	Tropical Forest Soil	RVADLPQTAAVKALERESKAMPKGEDTQGPILEQIDWQATTHRPLPPALIRELAQARSGADGGD*
Ga0126379_107644812	3300010366	Tropical Forest Soil	FINERTADLPQTAATMALEQLSLTMPKGEDTQGPILELIDWQATTSQPIPAALKQEVAKAQLAGLAMPREAAPGS*
Ga0126379_118167571	3300010366	Tropical Forest Soil	KDQASQLTSADLMPFNPVADPSFINERVADLPQTAAIKALERQSQAMPKGEDTQGPVLEQIDWQATTNRPIPAALKQEVAKARSRADGG*
Ga0126381_1005798361	3300010376	Tropical Forest Soil	ADLQPFDPVADPSFINERVADLPQTAATRALERQSQAMPGGEDTQGPILEQIDWQASTSLPIPPALKQEVADSRSTAGGD*
Ga0126381_1006091853	3300010376	Tropical Forest Soil	SFINERVADLPQTAAVRALERESKAMPKGEDTQGPILEQIDWQATTHRPIPPALKQELARARSAADRDRG*
Ga0126381_1008320091	3300010376	Tropical Forest Soil	FINERVADLPPTAATMALVQQSLAMPKGQDTQGPILEQIDWQATTSRPLPAALKQEVAKAQTSTGGG*
Ga0126381_1015436401	3300010376	Tropical Forest Soil	QNKDQASQLTPADLQPFSPVADPSFINERVADLPQTAATKALERQSQAMPKGEDTQGPILEQIDWQASTSRPVPSALKQEVAKSRSAAGGD*
Ga0126381_1015753452	3300010376	Tropical Forest Soil	PSFINERVADLPPTATTQALVRQSQAMPKGQDTQGPILEQIDWQVSTNRPIPPALRQEVAKSRSGTAGSD*
Ga0126381_1016891191	3300010376	Tropical Forest Soil	PQLTAADLQPFNVVANPSFINETVASLPQTAAIIALERLSKTMPGGEDTQGPILEQIDWQATTNRPIPPGLLQEIARARNGAGAH*
Ga0126381_1020781932	3300010376	Tropical Forest Soil	PSFINERVADLPQTSAIIALERQSLAMPKGEDTQGPILEQIDWQASTNRPIPPALAQEVAKARSAPSGR*
Ga0126381_1022505881	3300010376	Tropical Forest Soil	DQPSALTPADLQPFSPVAGPSFIDERVAGLPQTAATQSLERQSKAMPKGEDTQGPILEVIDWLVTTGRPIPLALRLELAKWRSGAGGD*
Ga0126381_1023449891	3300010376	Tropical Forest Soil	PSFINERVADLPHTAAVMVLERQSRAMPKGEDTQGPILEQIDWLATTHRPLPAALKLELAKARSKAGGD*
Ga0126381_1027950712	3300010376	Tropical Forest Soil	LPQTAAVKALERESRAMPKGEDTQGPILEQIDWQATTSRSIPPALRRELAKSRSGADGG*
Ga0126381_1028003611	3300010376	Tropical Forest Soil	PFNPVADPSFIDERVADLPQTAAIIALEQQSLAMPKGQDTQGPILEQIDWQASTNRPIPPALKQEVAKARSAASGN*
Ga0126381_1036539931	3300010376	Tropical Forest Soil	PFTPVADPSFINEKVADLPQTAAMKALERQSRAMPKGEDTQGPILEQIDWQATTNRSIPPALKREVAKSHSGKSGD*
Ga0134126_115691931	3300010396	Terrestrial Soil	FIDEKVADLPQTAAIRKLEAESRAMPKGEDTQGPILEQIDWQATAGRPIPAALREEVAKAKNGRGDG*
Ga0126383_123222621	3300010398	Tropical Forest Soil	DERVADLPQTAAIKALERQSRAMPKGEDTQGPILEQIDWQATTNRQIPPALRQEVAGSRGGAGGG*
Ga0126383_129763881	3300010398	Tropical Forest Soil	DPSFINEKVADLPQTAAMKALERQSRAMPKGEDTQGPILEQIDWQATVNRPLPPALRREVARARAAADGG*
Ga0137388_120360111	3300012189	Vadose Zone Soil	PSFINERVADLPQTAAIKALERQSQAMPKGEDTQGPILEQIDWQASTSRPIPPALKRELAKSRSGAGHD*
Ga0137416_121479251	3300012927	Vadose Zone Soil	GPSFINERVADLPQTAAIRALERRSRAMPKGEDTQGPILEQIDWQASTSRPIPPALKQEVAKSRSGAGGN*
Ga0126375_111281102	3300012948	Tropical Forest Soil	TPADLEPFNPVADPPFINEKVADLPQTAALKALERQSRAMPNGEDTQGPILEQIDWQATTSRSIPPALRREVAKSRSGADGG*
Ga0126369_115513811	3300012971	Tropical Forest Soil	DQASQLTSADLQPFNMVADPSFINERVADLPQTAAIMALERQSRAMPKGEDTQGPILEQIDWQATTNRPVPAALRQEVAKARSSGAN*
Ga0126369_135763611	3300012971	Tropical Forest Soil	SADLKPFTPVADPSFINERVADLPQTAAIKALERQSQAMPKGEDTQGPVLEQIDWQATTNRPIPAALKQEVAKARSGADGG*
Ga0157374_126554642	3300013296	Miscanthus Rhizosphere	NEKVADLPQTAAIKKLERESRAMPKGEDTQGPILEQIDWQATAGRPIPAALREEVARAAHDKTPRSGDDG*
Ga0137403_112653251	3300015264	Vadose Zone Soil	TDLQPFSSVADPSFTSERVAGLPQTAATKALERQSQAMPKGEDTQGPILELIDWEATTNQPVPAALRAEVAKSLSGAGGG*
Ga0182036_112649332	3300016270	Soil	DPVADPPFINETVAGLPQTAALKALERLSRTMPKGEDKQGPILEQLDWQATTNRPIPPALKREVAAAASRSGAGGG
Ga0182033_118296011	3300016319	Soil	LTASDLTPFTPVGDPPFIDERVADLPQAAATQALIRQSKAMPKGEDTQGPILEQIDWQATTNRPIPQALKQELAKARSATTDDD
Ga0182035_103946281	3300016341	Soil	VADPSFINERVADLPQTAATKALERQSQAMPKGEDTQGPILEQIDWQASTSRPIPPALKQEVVKSLSAAGGD
Ga0182040_101027052	3300016387	Soil	LTAADMTPFTPVAAPSFIDERVADLPLTAQTQSLERQSQAMPKGEDTQGPILEQIDWQATTNRPIPAALLQEVSKSQSAARAG
Ga0182037_108145732	3300016404	Soil	NERVADLPQTAAVKALERQSQAMPKGEDTQGPVLEQIDWQASTNRPIPPALKQEVAKSLRGAGGG
Ga0182037_115758741	3300016404	Soil	KDQASQLTTADMTPFSPVASPSFIDERVADLPLTAQTQSLERQSQAMPKGEDTQGPILEQIDWQATTNRPIPAALLQEVAKSRSATGAG
Ga0182039_105696952	3300016422	Soil	NKDQASQLTPADLKPFNPVADPPFINETVAGLPQTAALKALERLSRTMPKGEDKQGPILEQLDWQATTNRPIPPALKREVAAAASRSGAGGG
Ga0182038_103164211	3300016445	Soil	PVADPSFINERVADLPQTAATKALEQQSQAMPKGEGTQGPILEQIDWQASTNRPLPPALKQEVAKSRSGAGGD
Ga0182038_119524281	3300016445	Soil	NKDQASQLTPADLTPFAPVAAPSFIDERVADLPPTAQTQSLERQSQAMPKGEDTQGPILEQIDWQATTNRPIPSALLQEVAKSRSAPGTG
Ga0126371_128776271	3300021560	Tropical Forest Soil	PVADPSFINETVAGLPQTPAMIALERQSLAMPKGEDTQGPILEQIDWQATTHRPIPAALIQELARARAQSAAGEH
Ga0126371_128913741	3300021560	Tropical Forest Soil	PVADPSFINEKVADLPQTAAMKALERQSRAMPKGEDTQGPILEQIDWQATVNRPLPPALRREVARARAAADGG
Ga0207664_104283953	3300025929	Agricultural Soil	ERVADLPQTAATKALVRRSLAMPKGEDTQGPTLELIDWQATTSRPVPAALKAEAAKSLSGAGGD
Ga0209131_100780210	3300026320	Grasslands Soil	SADLQPFNSVADPSFINERVADLPQTAAIKALERQSQAMPKGEDTQGPILEQIDWQASTNRPIPLALKRELAKSRSGAGHD
Ga0318574_102086612	3300031680	Soil	INERVADLPPTAATMALVQQSLAMPKGQDTQGPILEQIDWQATTNRPIPPALKQEVAKAQSAARSG
Ga0318574_106740651	3300031680	Soil	AADLQPFNPVADPSFINERVADLPQTAATKALEQQSQAMPKGEDTQGPILEQIDWQASTNRPLPPALKQEVAKSRSGAGGD
Ga0306917_104960482	3300031719	Soil	QVSQLTPADLKPFTPVADPPFINERVAGLPQTAALKALERQSRALPKGEDTQGPYLEQIDWQATTNRPVPAALKREVARYRTGAAGG
Ga0318535_105424671	3300031764	Soil	GDPPFIDERVADLPQAAATQALIRQSKAMPKGEDTQGPILEQIDWQATTNRPIPQALKQELAKARSATTDDD
Ga0318543_104957472	3300031777	Soil	KDQASQLTPADLQPFNPVADPSFIDERVADLPQTAATKALERRSRAMPKGEDTQGPILEQIDWQASTSRPIPPALKQEVAKSLSAAGAG
Ga0318503_102140042	3300031794	Soil	LTPADLKPFDPVADPPFINETVAGLPQTAALKALERLSRTMPKGEDKQGPILEQLDWQATTNRPIPPALKREVAAAASRSGAGGG
Ga0318557_102676112	3300031795	Soil	PADLKPFNPVADPPFINETVAGLPQTPALKALERLSRTMPGGEDKQGPILEQLDWQATTNRPIPPALKREVAAAASRSGAGGG
Ga0318565_105376911	3300031799	Soil	FQNKDQASELTSADLAPFNPVADPPFINEKVADLRQTAALKALERESRAMPKGEDTQGPILEQIDWQATTSRSIPPALKQEVAKSRSGKGGD
Ga0318568_107458071	3300031819	Soil	DLLPFDPVADPSFINERVADLPQTAAIKALERQSRAMPKGEDTQGPILEQIDWQATTNRQIPPALRQEVAKSRSGPGGD
Ga0318499_100427922	3300031832	Soil	ERVADLPQTAAIKALERQSQAMPKGEDTQGPVLEQIDWQASTNRPIPPALKQEVAKSLRGAGGG
Ga0318517_104825481	3300031835	Soil	LQPFNPVADPSFIDERVAGLPQTAAVRALERQSQAMPKGEDTQGPILEQIDWQASTNRPIPPALKQEVAKSRGTVISTV
Ga0306919_104615021	3300031879	Soil	SDLTPFTPVGDPPFIDERVADLPQAAATQALIRQSKAMPKGEDTQGPILEQIDWQATTNRPIPQALKQELAKARSATTDDD
Ga0318522_102734091	3300031894	Soil	ITPVADPSFVNERVADLPQTAALKALERLSKTMPGGEDTQGPILEQIDWQATTGRPIPAALKQEVARSRSAAARD
Ga0318551_108365001	3300031896	Soil	LTVADLQPFTVVADPSFIDERVADLPQTAEIKALERLSRAMPKGEDTQGPILEQIDWQATTDRPIPPALKQEVAKSRSAASRS
Ga0306923_113587472	3300031910	Soil	ADLQPFNPVADPSFIDERVADLPQTAATKALERRSRAMPKGEDTQGPILEQIDWQASTSRPIPPALKQEVAKSLSAAGAG
Ga0306921_109547052	3300031912	Soil	QLTPADLKPFDPVADPPFINETVAGLPQTAALKALERLSRTMPKGEDKQGPILEQLDWQATTNRPIPPALKREVAAAASRSGAGGG
Ga0310912_113617221	3300031941	Soil	FQNKDQAAQLTASDLTPFTPVGDPPFIDERVADLPQAAATQALIRQSKAMPKGEDTQGPILEQIDWQATTNRPIPQALKQELAKARSATTDDD
Ga0306926_116788751	3300031954	Soil	TPFNPVADPSFINERVADLPLTAKTAALVRQSGAMPKGQDTQGPILEQIDWQATTNRPIPSALLQEVAKSRNAPGTG
Ga0318530_100441702	3300031959	Soil	NERVADLPQTAAMIALERQSLSMPKGEDTQGPILEQIDWQASTNRPIPPALKQEVAKSLRGAGGG
Ga0318562_104650261	3300032008	Soil	INERVADLPQTAAIKALERQSRAMPKGEDTQGPILEQIDWQASTNRPIPPALKQEVAKSPRGAGGD
Ga0318562_108927701	3300032008	Soil	VADLPQTAALKALERESRAMPKGEDTQGPILEQIDWQATTSRSIPPALKQEVAKSRSGKGGD
Ga0318563_107149421	3300032009	Soil	NERVADLPQTAAIKALERQSRAMPKGEDTQGPILEQIDWQASTNRPIPPALKQEVAKSPRGAGGD
Ga0318549_105237692	3300032041	Soil	INEKVADLPQTPAMKALERQSRAMPKGEDTQGPILEQIDWQATTSRSIPPALKQEVAKSRSGKGGD
Ga0318506_105724731	3300032052	Soil	NKDQASQLTPADLTPFAPVAAPSFIDERVADLPPTAQTQSLERQSQAMPKGEDTQGPILEQIDWQATTNRPIPSALLQEVAKSRNAPGTG
Ga0318575_105223702	3300032055	Soil	KDQVSQLTAADLQPFNPVADPSFINERVADLPQTAATKALEQQSQAMPKGEDTQGPILEQIDWQASTNRPLPPALKQEVAKSRSGAGGD
Ga0318510_101791141	3300032064	Soil	SQLTSADLQPFNPVADPPFINERVADLPQTAAVKALERQSQAMPKGEDTQGPVLEQIDWQASTNRPIPPALKQEVAKSLRGAGGG
Ga0318553_100750762	3300032068	Soil	PPFINERVADLPQTAAVKALERQSQAMPKGEDTQGPVLEQIDWQASTNRPIPPALKQEVAKSLRGAGGG
Ga0306924_120259211	3300032076	Soil	TPFSPVASPSFIDERVADLPLTAQTQSLERQSQAMPKGEDTQGPILEQIDWQATTNRPIPSALLQEVAKSRSAPGTG
Ga0306924_122779122	3300032076	Soil	VADPPFIDETVASLPQTPAMKALERQSRAMPKGEDTQGPILEQIDWQATTHRPLPAALRQEVAKAQSGAYRG
Ga0306920_1024773071	3300032261	Soil	DLPQTAALKALERESRAMPKGEDTQGPILEQIDWQATTSRSIPPALKQEVAKSRSGKGGD
Ga0306920_1043817622	3300032261	Soil	TPADLKPFTPVADPPFINERVAGLPQTAALKALERQSRALPKGEDTQGPYLEQIDWQATTNRPVPAALKREVAKYRTGPAGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104743

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences