NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104648

Metagenome / Metatranscriptome Family F104648

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104648
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 74 residues
Representative Sequence ASKTGRVLIVQDEPPWSGYAPYVRCLLDELPSGVLAVAPRIISGADEFLPYWDERPFLPSLESLIAAVKELMRK
Number of Associated Samples 86
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.00 %
% of genes near scaffold ends (potentially truncated) 96.00 %
% of genes from short scaffolds (< 2000 bps) 92.00 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(11.000 % of family members)
Environment Ontology (ENVO) Unclassified
(29.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(36.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.75%    β-sheet: 9.80%    Coil/Unstructured: 77.45%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13343SBP_bac_6 22.00
PF09084NMT1 13.00
PF10094DUF2332 8.00
PF13379NMT1_2 3.00
PF01557FAA_hydrolase 2.00
PF04909Amidohydro_2 2.00
PF04389Peptidase_M28 2.00
PF12697Abhydrolase_6 1.00
PF00296Bac_luciferase 1.00
PF03358FMN_red 1.00
PF02780Transketolase_C 1.00
PF13472Lipase_GDSL_2 1.00
PF030614HBT 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 13.00
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 13.00
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459020|G1P06HT02G78TXAll Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium523Open in IMG/M
3300000041|ARcpr5oldR_c008207All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_11362469All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1674Open in IMG/M
3300000559|F14TC_101057915All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300000559|F14TC_101074090All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium500Open in IMG/M
3300000559|F14TC_111252469All Organisms → cellular organisms → Bacteria → Proteobacteria503Open in IMG/M
3300000580|AF_2010_repII_A01DRAFT_1047996All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium657Open in IMG/M
3300000580|AF_2010_repII_A01DRAFT_1074139All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium516Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1095421All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium521Open in IMG/M
3300002407|C687J29651_10088259All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300003987|Ga0055471_10267590All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium544Open in IMG/M
3300003998|Ga0055472_10280532All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300004061|Ga0055487_10078626All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300004070|Ga0055488_10142848All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium617Open in IMG/M
3300004156|Ga0062589_101612851All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300004268|Ga0066398_10121672All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium628Open in IMG/M
3300004479|Ga0062595_100298130All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300004779|Ga0062380_10122855All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium988Open in IMG/M
3300005331|Ga0070670_101237777All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium683Open in IMG/M
3300005332|Ga0066388_107241550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Oceanithermus → Oceanithermus profundus557Open in IMG/M
3300005332|Ga0066388_107866612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei533Open in IMG/M
3300005366|Ga0070659_101071740All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300005439|Ga0070711_100406928All Organisms → cellular organisms → Bacteria → Proteobacteria1106Open in IMG/M
3300005459|Ga0068867_100053350All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2986Open in IMG/M
3300005467|Ga0070706_101464841All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria624Open in IMG/M
3300005539|Ga0068853_100101463All Organisms → cellular organisms → Bacteria2545Open in IMG/M
3300005549|Ga0070704_101868514All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium556Open in IMG/M
3300005557|Ga0066704_10123030All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1722Open in IMG/M
3300005615|Ga0070702_100895806All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria694Open in IMG/M
3300005713|Ga0066905_100260959All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1338Open in IMG/M
3300005718|Ga0068866_10757527All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium671Open in IMG/M
3300005840|Ga0068870_10681965All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria707Open in IMG/M
3300005873|Ga0075287_1037478All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium644Open in IMG/M
3300006845|Ga0075421_100791215All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1093Open in IMG/M
3300006845|Ga0075421_101775457All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium664Open in IMG/M
3300006847|Ga0075431_101188915All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300006853|Ga0075420_100341225All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1297Open in IMG/M
3300006871|Ga0075434_100360586All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1475Open in IMG/M
3300006880|Ga0075429_100761402All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300006969|Ga0075419_11136611All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium574Open in IMG/M
3300009147|Ga0114129_10107404All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3855Open in IMG/M
3300009156|Ga0111538_12226472All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria689Open in IMG/M
3300009792|Ga0126374_10002747All Organisms → cellular organisms → Bacteria5632Open in IMG/M
3300009792|Ga0126374_10504653All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300009792|Ga0126374_11743641All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium519Open in IMG/M
3300009815|Ga0105070_1031262All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300009816|Ga0105076_1014024All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1364Open in IMG/M
3300010037|Ga0126304_10249338All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1168Open in IMG/M
3300010046|Ga0126384_12042331All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium549Open in IMG/M
3300010048|Ga0126373_11108205All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria858Open in IMG/M
3300010048|Ga0126373_12009275All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium641Open in IMG/M
3300010358|Ga0126370_10133734All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1780Open in IMG/M
3300010358|Ga0126370_11521943All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium637Open in IMG/M
3300010358|Ga0126370_12433242All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium521Open in IMG/M
3300010359|Ga0126376_11359940All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300010397|Ga0134124_12356224All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium573Open in IMG/M
3300010398|Ga0126383_12062775All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria657Open in IMG/M
3300010401|Ga0134121_11593751All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium672Open in IMG/M
3300010403|Ga0134123_10773672All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium949Open in IMG/M
3300011442|Ga0137437_1121143All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium900Open in IMG/M
3300012038|Ga0137431_1105389All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium793Open in IMG/M
3300012198|Ga0137364_10782553All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium721Open in IMG/M
3300012204|Ga0137374_10188286All Organisms → cellular organisms → Bacteria1792Open in IMG/M
3300012204|Ga0137374_10200332All Organisms → cellular organisms → Bacteria1720Open in IMG/M
3300012355|Ga0137369_10020231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6296Open in IMG/M
3300012355|Ga0137369_10338684All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1103Open in IMG/M
3300012360|Ga0137375_10341463All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1334Open in IMG/M
3300012495|Ga0157323_1012718All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium697Open in IMG/M
3300012927|Ga0137416_10927433All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium775Open in IMG/M
3300012931|Ga0153915_10268850All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1895Open in IMG/M
3300012964|Ga0153916_10583344All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1194Open in IMG/M
3300015374|Ga0132255_103690869All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria651Open in IMG/M
3300015374|Ga0132255_104700984All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium578Open in IMG/M
3300016319|Ga0182033_11840506All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium550Open in IMG/M
3300016404|Ga0182037_10427307All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1097Open in IMG/M
3300018084|Ga0184629_10201894All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1027Open in IMG/M
3300018429|Ga0190272_10847601All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium849Open in IMG/M
3300018465|Ga0190269_11616897All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium541Open in IMG/M
3300019789|Ga0137408_1066248All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2509Open in IMG/M
3300019882|Ga0193713_1082477All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium904Open in IMG/M
3300021332|Ga0210339_1593561All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium800Open in IMG/M
3300025319|Ga0209520_10146184All Organisms → cellular organisms → Bacteria1501Open in IMG/M
3300025916|Ga0207663_10189682All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1475Open in IMG/M
3300027513|Ga0208685_1037683All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1057Open in IMG/M
3300027577|Ga0209874_1051571All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1065Open in IMG/M
3300027873|Ga0209814_10358280All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium639Open in IMG/M
3300027952|Ga0209889_1007723All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2756Open in IMG/M
3300028536|Ga0137415_10766862All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium775Open in IMG/M
3300028589|Ga0247818_11084250All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium569Open in IMG/M
3300028802|Ga0307503_10165303All Organisms → cellular organisms → Bacteria → Proteobacteria1018Open in IMG/M
(restricted) 3300031248|Ga0255312_1187264All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium521Open in IMG/M
3300032075|Ga0310890_11733387All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium519Open in IMG/M
3300032180|Ga0307471_100688190All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1186Open in IMG/M
3300032205|Ga0307472_100017217All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3846Open in IMG/M
3300032205|Ga0307472_100198224All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1523Open in IMG/M
3300032211|Ga0310896_10792263All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium542Open in IMG/M
3300032261|Ga0306920_101902339All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium836Open in IMG/M
3300033513|Ga0316628_103462400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium570Open in IMG/M
3300033551|Ga0247830_10636227All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium845Open in IMG/M
3300034819|Ga0373958_0107684All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium661Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.00%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand4.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.00%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.00%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.00%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.00%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459020Litter degradation NP2EngineeredOpen in IMG/M
3300000041Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphereHost-AssociatedOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300002407Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1EnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300004061Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004070Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004779Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3FreshEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009815Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10EnvironmentalOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300012038Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012495Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610Host-AssociatedOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300021332Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027513Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)EnvironmentalOpen in IMG/M
3300027577Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
2NP_024314102170459020Switchgrass, Maize And Mischanthus LitterLRSASKTGRVLIVQDEPPWSGYAPFVRCLLDELPAEKLRCAPRILAGADQFLPFWDERPFLPSIESVVTTVREFLK
ARcpr5oldR_00820723300000041Arabidopsis RhizosphereLKSSSKTGRVLIVQDEPAVSGYAPYVRCVLDELPATKLALAPRILAGLDQYLPYWDERPFLPSVEGVMAAAKDLMR*
ICChiseqgaiiFebDRAFT_1136246933300000363SoilGRVLIVQDEPEWAGYAPYVRCVLDRLPAGKLKLAPRLLVGADQYLPYWDERPFVPSVASVVSAAQDLVKH*
F14TC_10105791523300000559SoilETILKAATKTGRVLIVQDEPPSSGYAPYVRCLLDELPSGALAVTPRIISGADEFLPYWDERPFLPSLETVMAAAKGLMR*
F14TC_10107409023300000559SoilVLIVQDEPPWSGYAPYVRCLLDQLPSGALAVRPRIVSGADEFLPYWDERPFLPSLESVVAVAKELME*
F14TC_11125246923300000559SoilEVDSLGFIKPLDSDTXXXXXXXXXRVLIVQDEPEWAGYAPYLRCVLDRLPAGKLLRAPRLLVGADQYLPYWDERPFLPSL*
AF_2010_repII_A01DRAFT_104799623300000580Forest SoilDEPPWSGYAPYIRCLLDELPPGSLAIAPRIISGADEYLPYWNERPFLPSVEGIITAATELMM*
AF_2010_repII_A01DRAFT_107413923300000580Forest SoilETILKAANKTRRVLIVQDEPPWSGYAPYVRCLLDELPLGALAVRPRIISGADEFLPYWDERPFLPSLENVTAAAKELMK*
AF_2010_repII_A100DRAFT_109542123300000655Forest SoilTILKAANKTRRVLIVQDEPPWSGYAPYVRCLLDELPLGALAVRPRIISGADEFLPYWDERPFLPSLENVTAAAKELMK*
C687J29651_1008825923300002407SoilNSANKTRRVLIIQDEPPLSGYAPHVRCLLDELPAGKLTIAPRIIAGADQFLPFWDERPFLPSLEGVAATAVEMMR*
Ga0055471_1026759023300003987Natural And Restored WetlandsTARVLIVQDEPPWGGYAPVVRCLLDNLPNGSLTAGPRILAGVDQYLPFWDERPFLPSLQDLIDAAEEMMVG*
Ga0055472_1028053213300003998Natural And Restored WetlandsDKETILKAASKTGKVLIVQDEPPWSGYAPYVRCLLDELPAERLACAPRILAGADQFLPFWDERPFLPSLENVIEGAMKLMR*
Ga0055487_1007862613300004061Natural And Restored WetlandsKTGRVLIVQDEPEWAGYAPYVRCLLDRLPAGKLALAPRLLVGADQYLPYWDERPFVPSLESVVAAAKDLLKQ*
Ga0055488_1014284813300004070Natural And Restored WetlandsSKTGKVLIVQDEPPWSDYAPYVRCLLDELPAGRLACAPRILAGSDQFLPFWDERPFLPSLENVIDSAVKLMQ*
Ga0062589_10161285123300004156SoilKTGRVLIVQDEPEWAGYAPYVRCVLDRLPAGKLKLAPRLLVGADQYLPYWDERPFVPSVASVVSAAQDLVKH*
Ga0066398_1012167233300004268Tropical Forest SoilIVQDEPPWSGYAPYVRCLLDELPLGALAVRPRIISGADEFLPYWDERPFLPSLENVTAAAKELMK*
Ga0062595_10029813023300004479SoilSSKTGRVLIVQDEPAVSGYAPYVRCVLDELPATKLALAPRILAGLDQYLPYWDERPFLPSVEGVMAAAKDLMR*
Ga0062380_1012285523300004779Wetland SedimentGRVLIIQDEPEWAGYAPYVRCVLDRLPAGKLAAAPRIINGADQYLPYWDERPFVPSLESVVAAARNLIA*
Ga0070670_10123777723300005331Switchgrass RhizosphereTGKTGRALIVQDEPAWSGYAPFVRCLLDDLPPGKLRCAPRILAGADQFLPFWDERPFLPSLESVLAVARELMQ*
Ga0066388_10724155013300005332Tropical Forest SoilGAARKTGRVLIIQDEPPWSGYAPYIRCLLDELPPSSLAIAPRIISGADEYLPYWDERPFLPSVEGIITAATELMM*
Ga0066388_10786661213300005332Tropical Forest SoilGAARKTGRVLIIQDEPPWSGYAPYIRCLLDELPPSSLAIVPRIISGADEYLPYWDERPFLPSVEGVVAAVKELLK*
Ga0070659_10107174023300005366Corn RhizosphereAAGQTGRVLIVQDEPPSGGYAPYVRCLLDELPPRALKATPRIVAGADEFLPYSDERPFLPSLESVVAAASELLN*
Ga0070711_10040692813300005439Corn, Switchgrass And Miscanthus RhizosphereKPLDKDTVLRSTGKTGRTLIVQDEPAWSGYAPFVRCLLDDLPPGKLRCAPRILAGADQFLPFWDERPFLPSLESVVAAARELMQ*
Ga0068867_10005335013300005459Miscanthus RhizosphereVLIVQDEPTWSGYAPFVRCLLDELPPGTLRCAPRILAGADQFLPFWDERPFLPSIQSIGTAVREFLK*
Ga0070706_10146484123300005467Corn, Switchgrass And Miscanthus RhizosphereSNTGRVLIVQDEPTWSGYAPFVRCLLDELPPGTLRCAPRILAGADQFLPFWDERPFVPSIQSIGIAVREFLK*
Ga0068853_10010146333300005539Corn RhizosphereLGFIKPLDKETIFRSASNTGRVLIVQDEPTWSGYAPFVRCLLDELPAGTLRCAPRILAGADHFLPFWDERPFLPSIQSIGTAVREFLK*
Ga0070704_10186851413300005549Corn, Switchgrass And Miscanthus RhizosphereASNTGRVLIVQDEPTWSGYAPFVRCLLDELPPGTLRCAPRILAGADQFLPFWDERPFVPSIQSIGIAVREFLK*
Ga0066704_1012303033300005557SoilVLIVQDEPPWSGYAPYVRCLLDELPSGVLAVTPRIISGADEFLPYWDERPFLPSLESLVAAAKELMKT*
Ga0070702_10089580623300005615Corn, Switchgrass And Miscanthus RhizosphereGRVLIVQDEPVWSSYAPLVRCLLDELPAAKLARPPRILAGADQFLPFWDERPFLPSIESVIDAAQQLIG*
Ga0066905_10026095913300005713Tropical Forest SoilTGRVLIIQDEPPWSGYAPYIRCLLDELPPSSLAIAPRIISGADEYLPYWDERPFLPSVEGIITAATELMM*
Ga0068866_1075752713300005718Miscanthus RhizosphereKPLDKETIFRSASNTGRVLIVQDEPTWSGYAPFVRCLLDELPPGTLRCAPRILAGADQFLPFWDERPFLPSIQSIGTAVREFLK*
Ga0068870_1068196513300005840Miscanthus RhizosphereESAGKTGRVLIVQDEPVWSGYAPLVRCLLDELPAAKLARPPRILAGADQFLPFWDERPFLPSIESVVDAAQQLIG*
Ga0075287_103747813300005873Rice Paddy SoilTILKASSKTGRVLIVQDEPILSGYAPYVRCVLDELPDAKLACAPRIIAGADQFLPFWDERPFLPSLEGVIAAAKEILQKN*
Ga0075421_10079121523300006845Populus RhizosphereLIVQDEPPWSGYAPYVRCLLDQLPSGALAVRPRIVSGADEFLPYWDERPFLPSLESVVAVAKELME*
Ga0075421_10177545713300006845Populus RhizosphereLIIQDEPVLAGYAPYLRCLLDELRAGKLAMPPRILAGADQYMPFWDERSFLPSVEAIIATAREMIEEK*
Ga0075431_10118891513300006847Populus RhizosphereGRVLIVQDEPPSSGYAPYVRCLLDELPSGALAVTPRILSGADEFLPYWDERLFLPSLEGVVAATKELMK*
Ga0075420_10034122523300006853Populus RhizosphereKTRRVLIVQDEPPWSGYAPYVRCLLDQLPSGALAVRPRIVSGADEFLPYWDERPFLPSLESVVAVAKELME*
Ga0075434_10036058613300006871Populus RhizosphereSKTGRALIVQDEPVWSGYATFVRCLLDELPAGKLCCAPRILAGADQFLPFWDERPFLPSIQSVVTAVRECLK*
Ga0075429_10076140213300006880Populus RhizosphereTKTGRVLIIQDEPVLAGYATYLRCLLDELPTGKLAFPPRIVAGADQYMPFWDERSFLPSVEAIIAAAREMMEEK*
Ga0075419_1113661113300006969Populus RhizosphereTGRVLIVQDEPAWSGYVPYVRCVLDELPAGKLALPPCILAGADQFLPFWDERPFLPSLESVLAVARELMQ*
Ga0114129_1010740413300009147Populus RhizosphereVLIVQDEPAGSGYAPYVRCLFDELPMGKLALPPRILAGVDQFLPFWDEGLFLPSVEGIIAAAREMMSEQ*
Ga0111538_1222647223300009156Populus RhizosphereLRSTSKTGRALIVQDEPVWSGYATFVRCLLDELPAGKLCCAPRILAGADQFLPFWDERPFLPSIQSVVTAVRECLK*
Ga0126374_1000274713300009792Tropical Forest SoilETIFGAARKTGRVLIIQDEPPWSGYAPYIRCLLDELPPSSFAIAPRIISGADEYLPYWDETPFLPSVEGIITAATELMM*
Ga0126374_1050465313300009792Tropical Forest SoilIVQDEPPWSGYAPYVRCLLDELPLGALAVRPRIISGADEFLPYWDERPFLPSLESIIAAAKELMK*
Ga0126374_1174364113300009792Tropical Forest SoilETIFGAARKTGRVLIIQDEPPWSGYAPYIRCLLDELPPSSLAIAPRIISGADEYLPYWDERPFLPSVEGVVAAVKELLK*
Ga0105070_103126223300009815Groundwater SandDRETILKAVTKTGRVLIVQDEPPWSGYAPYVRCLLDELPSGALAVTPRIISGADEFLPYWDERPFLPSLKGIIDSAMELMK*
Ga0105076_101402413300009816Groundwater SandKTGRILIVQDEPPWSGYAPYVRCLLDELPSGALAVTPRIISGADQFLPYWDERPFLPSLKDIIDNAMDLIVK*
Ga0126304_1024933823300010037Serpentine SoilVLIVQDEPEWAGYAPYVRCVLDRLPAGKLLRAPRLMVGADQYLPYWDERPFLPSLESVVAAAKNLLEK*
Ga0126384_1204233113300010046Tropical Forest SoilAANKTNRVLIVQDEPPWSGYAPYVRFLLDDLPSDSLAVRPRVISGADEFLPYWDERPFLPSLESVMAAAKELMK*
Ga0126373_1110820513300010048Tropical Forest SoilTGRVLIVQDERAWAGYARFIRCLLDELPAETLRCAPRVLTGADQFLPFWDERPFLPSIESVVTAVRECLKIKLSSSH*
Ga0126373_1200927523300010048Tropical Forest SoilGAARKTGRVLIIQDEPPWSGYAPYIRCLLDELPPSSLAIAPRIISGADEYLPYWDERPFLPSVEGVVAAVKELLK*
Ga0126370_1013373433300010358Tropical Forest SoilFGAARKTGRVLIIQDEPPWSGYAPYIRCLLDELPPSSLAIVPRIISGADEYLPYWDERPFLPSVEGVVAAVKELLK*
Ga0126370_1152194313300010358Tropical Forest SoilRVLIIQDEPPWSGYAPYIRCLLDELPPGSLAIAPRIISGADEYLPYWDERPFLPSVEGIITAATELMM*
Ga0126370_1243324213300010358Tropical Forest SoilFGAARKTGRVLIIQDEPPWSGYAPYIRCLLDELPPSSLAIAPRIISGADEYLPYWDERPFLPSVEGIITAATELMM*
Ga0126376_1135994013300010359Tropical Forest SoilRRVLIVQDEPAWSGYAPYVRCLLDELSLGALAVRPRIISGADEFLPYWDERPFLPSSESIIAAATELMK*
Ga0134124_1235622413300010397Terrestrial SoilPLDKDTVLRSTGKTGRALIVQDEPAWSGYAPFVRCLLDDLPPGKLRCAPRILAGADQFLPFWDERPFLPSLESVLAVARELMQ*
Ga0126383_1206277513300010398Tropical Forest SoilIQDEPPWSGYAPYIRCLLDELPPGSLAIAPRIISGADEYLPYWDERPFLPSVEGVVAAVKELLK*
Ga0134121_1159375113300010401Terrestrial SoilKTGRVLIVQDEPAVSGYAPYVRCVLDELPATKLALAPRILAGLDQYLPYWDERPFLPSVESVMAAATDLMR*
Ga0134123_1077367213300010403Terrestrial SoilQDEPAWSGYAPFVRCLLDDLPPGKLRCAPRILAGADQFLPFWDERPFLPSLESVLAVARELMQ*
Ga0137437_112114323300011442SoilASKTGRVLIIQDEPEWAGYAPYVRCALDRLPAGKLAIAPRLLVGADQYLPYWDERPFLPSLETVVSAATELLK*
Ga0137431_110538923300012038SoilVLIVQDESEWGGYAPVVRCLLDVPPTAKLAAPPCILAGADQFLPFWDERPFLPSLERVVTAAKELIGKTM*
Ga0137364_1078255313300012198Vadose Zone SoilSKTGRVLIVQDEPAVSGYAPYVRCVLDELPATKIALAPRILAGADQYLPYWDERPFLPSLETVMAAAKDLMR*
Ga0137374_1018828633300012204Vadose Zone SoilQDEPPWSGYAPYVRCALDELPAGKLAFTPRILVGADQYLPYYDERPFLPSLETIIAAAKGLID*
Ga0137374_1020033233300012204Vadose Zone SoilQDEPPWSGYAPYVRCALDELPAGKLAFTPRILVGADQYLPFWDERPFLPSVEAIIAGAREMMEEK*
Ga0137369_1002023193300012355Vadose Zone SoilFKAANKTGRVLIVQDEPPWSGYAPYVRCALDELPAGKLAFTPRILVGADQYLPYYDERPFLPSLETIIAAAKGLID*
Ga0137369_1033868423300012355Vadose Zone SoilFKAANKTGRVLIVQDEPPWSGYAPYVRCALDELPAGKLAFTARILVGADQYLPFWDERPFLPSVEAIIAGAREMMEEK*
Ga0137375_1034146323300012360Vadose Zone SoilKTGRVLIIQDEPVLAGYAPHLRCLLDELPTGKLAFPPRIVAGADQYMPFWDERPFLPSVEAIIAGAREMMEEK*
Ga0157323_101271813300012495Arabidopsis RhizosphereWSVQDEPAVSGYAPYVRCVLDELPATKLALAPRILAGLDQYLPYWDERPFLPSVEGVMAAAKDLMR*
Ga0137416_1092743313300012927Vadose Zone SoilTGRVLIVQDEPAVSGYAPYVRCVLDELPATKLALAPRILAGLDQYLPYWDERPFLPSVEGVMAAAKDLMR*
Ga0153915_1026885033300012931Freshwater WetlandsLIVQDEPPWAGYAPYVHCLLDELPEGALAVAPRIINGADEFLPYWDERPFLPSLGGVMAAAQELMAQ*
Ga0153916_1058334423300012964Freshwater WetlandsLDKEAILSSAKKTGRVLILQDEPPWAGYAPYVRCLLDELPEGALAVAPRIINGADEFLPYWDERPFLPSLGGVMAAAQELMAQ*
Ga0132255_10369086923300015374Arabidopsis RhizosphereDKNTVLRSTSKTGRALIVQDEPVWSGYATFVRCLLDELPSGKLCCAPRILAGADQFLPFWDERPFLPSIQSVVTAVRECLK*
Ga0132255_10470098423300015374Arabidopsis RhizosphereLRSTGKTGRALIVQDEPAWSGYAPFVRCLLDDLPPGKLRCVPRILAGADQFLPFWDERPFLPSLESVLAAARELMQ*
Ga0182033_1184050623300016319SoilLIVQDEPAWSGYAPFIPCLLDALPTGTLHCAPRILAGVDQFLPFWDERPFLASVESVALAAKELLG
Ga0182037_1042730713300016404SoilLDKETILRSASKTGRALIVQDEPAWSGYAPFIRCLLDALPTGTLHCAPRILAGVDQFLPFWDERPFLASVESVALAAKELLG
Ga0184629_1020189413300018084Groundwater SedimentARKTGRVLIVQDEPEWGGYAPVVRCLLDELPPGKLVKMPRIIGGADQYLPYWDEKPFLPSLESVMAAGKEIIG
Ga0190272_1084760113300018429SoilRVLIVQDEPEWAGYAPYVRCALDRLAAGRLATAPRLLVGADQYLPYWDERPFLPSLESVVSAATELLK
Ga0190269_1161689713300018465SoilQDEPEWAGYAPYVRCVLDRLPAGKLLRAPRLLVGADQYLPYWDERPFLPSLESVLAAAKDFLEK
Ga0137408_106624843300019789Vadose Zone SoilKAATKTARVLIIQDEPVLAGYATYLRCLLDELPTGKLAFPPRIVAGADQYMPFWDERSFLPSVEAIIAAAREMMEEK
Ga0193713_108247723300019882SoilRVLIVQDEPAVSGYAPYVRCVLDELPATKIALAPRILAGADQYLPYWDERPFLPSVESVMAAAKDLMR
Ga0210339_159356123300021332EstuarineVLKSAARTGRVLIVQDEPEWAGYAPYVRCVLDRLPAGSLALAPRLLVGADQYLPYWDERPFVPSLERVVTGAKELIG
Ga0209520_1014618413300025319SoilVLIIQDEPPLSGYAPHVRCLLDELPAGKLTIAPRIIAGADQFLPFWDERPFLPSLEGVAATAVEMMR
Ga0207663_1018968233300025916Corn, Switchgrass And Miscanthus RhizosphereDYNFSRFSYERFMDPHDKDTVLRSTGKTGRTLIVQDEPAWSGYAPFVRCLLDDLPPGKLRCAPRILAGADQFLPFWDERPFLPSLESVVAAARELMQ
Ga0208685_103768323300027513SoilLIVQDEPEWAGYAPYVRCVLDRLPAGKLALAPRLLVGADQYLPYWDERPFVPSLESVVAAAKDLLKQ
Ga0209874_105157113300027577Groundwater SandLIVQDEPPWSGYAPYVRCLLDELPSGALAVTPRIISGADQFLPYWDERPFLPSLKDIIDNAMDLIVK
Ga0209814_1035828023300027873Populus RhizosphereRVLIVQDEPILSGYAPYVRCVLDELPEGKLACGPRIIAGADQFLPFYDERPFLPSLESVCEAAKEMLQKG
Ga0209889_100772333300027952Groundwater SandVQDEPPWSGYAPYVRCLLDELPSGALAVTPRIISGADQFLPYWDERPFLPSLKDIIDNAMDLIVK
Ga0137415_1076686213300028536Vadose Zone SoilTGRVLIVQDEPAVSGYAPYVRCVLDELPATKLALAPRILAGLDQYLPYWDERPFLPSVEGVMAAAKDLMR
Ga0247818_1108425023300028589SoilVLIVQDEPPYGGYALYLRWLLDNLPSGRLKVAPRIIHGAEQFLPYHDETSFLPSLANVVAAAKELMQIT
Ga0307503_1016530333300028802SoilETVLKSAGKTGRVLIVQDEPEWAGYAPYVRCALDRLPAGKLAMAPRLLVGADQYLPYWDERPFLPSQESIVSAARELLK
(restricted) Ga0255312_118726413300031248Sandy SoilRQGNGLHSASKTGRVLIVQDEPVLSGYAPYVRCLLDELTDGKLICAPRIMAGADQFLPFWDEKSFLPSVESVIVAVNEMLQKD
Ga0310890_1173338723300032075SoilVLIVQDEPVWSGYAPLVRCLLDELPAAKLARPPRILAGADQFLPFWDERPFLPSIESVVEAANRLLA
Ga0307471_10068819023300032180Hardwood Forest SoilRETIFGAARKTGRVLIIQDEPPWSGYAPYIRCLLDELPSGSLAIAPRILSGADEYLPYWDEKPFLPSVEGIIAIAKESMI
Ga0307472_10001721713300032205Hardwood Forest SoilASKTGRVLIVQDEPPWSGYAPYVRCLLDELPSGVLAVAPRIISGADEFLPYWDERPFLPSLESLIAAVKELMRK
Ga0307472_10019822433300032205Hardwood Forest SoilRKTGRVLIIQDEPPWSGYAPYIRCLLDELPSGSLAIPPRIISGSDEYLPYWDETPFLPSVEGIIAVAKESMI
Ga0310896_1079226313300032211SoilLDSDTVLKAASKTGQVLIVQDEPEWAGYAPYVRCVLDRLPAKKLALAPRLLVGADQYLPYWDERPFVPSLESVVAAAKDLLKQ
Ga0306920_10190233913300032261SoilRSASKTGRALIVQDEPAWSGYAPFIRCLLDALPTGTLHCAPRILAGVDQFLPFWDERPFLASVESVALAAKELLG
Ga0316628_10346240023300033513SoilKTGRILIVQDEPAWSGYAPYLRCLLDDLPAGKLTVAPRILAGADQFLPFWDERPFLPSLESVVAMAKEIANLQG
Ga0247830_1063622713300033551SoilLGLIKPLDQETVLQSATKTGRVLIVQDEPPYGGYALYLRWLLDNLPSGRLKLAPRIIHGAKQFLPYYDETSFLPSLANVVAAAKELMQIT
Ga0373958_0107684_2_2323300034819Rhizosphere SoilLRSTGKTGRALIVQDEPAWSGYAPFVRCLLDDLPPGKLRCAPRILAGADQFLPFWDERPFLPSLESVLAVARELMQ

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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