NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104427

Metagenome / Metatranscriptome Family F104427

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104427
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 66 residues
Representative Sequence MNNKDLQEFIEAFDDFMKHFETEELYYEGRMVYENHRAEAKRIQEQEIEAKAAELEVTCDYYMMEFM
Number of Associated Samples 58
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 76.00 %
% of genes near scaffold ends (potentially truncated) 20.00 %
% of genes from short scaffolds (< 2000 bps) 62.00 %
Associated GOLD sequencing projects 52
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Predicted Viral (42.000 % of family members)
NCBI Taxonomy ID 10239 (predicted)
Taxonomy All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(42.000 % of family members)
Environment Ontology (ENVO) Unclassified
(87.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(93.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 63.16%    β-sheet: 0.00%    Coil/Unstructured: 36.84%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02672CP12 11.00
PF01555N6_N4_Mtase 2.00
PF04965GPW_gp25 1.00
PF03330DPBB_1 1.00
PF07275ArdA 1.00
PF00923TAL_FSA 1.00
PF00149Metallophos 1.00
PF14240YHYH 1.00
PF13455MUG113 1.00
PF137592OG-FeII_Oxy_5 1.00
PF05118Asp_Arg_Hydrox 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0863DNA modification methylaseReplication, recombination and repair [L] 2.00
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 2.00
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 2.00
COG0176Transaldolase/fructose-6-phosphate aldolaseCarbohydrate transport and metabolism [G] 1.00
COG3555Aspartyl/asparaginyl beta-hydroxylase, cupin superfamilyPosttranslational modification, protein turnover, chaperones [O] 1.00
COG4734Antirestriction protein ArdADefense mechanisms [V] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.00 %
UnclassifiedrootN/A41.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000756|JGI12421J11937_10006065All Organisms → Viruses → Predicted Viral4760Open in IMG/M
3300001847|RCM41_1013349All Organisms → Viruses → Predicted Viral3058Open in IMG/M
3300003277|JGI25908J49247_10027102All Organisms → Viruses → Predicted Viral1653Open in IMG/M
3300003393|JGI25909J50240_1049952Not Available871Open in IMG/M
3300003491|JGI25924J51412_1059993Not Available588Open in IMG/M
3300004123|Ga0066181_10238633Not Available518Open in IMG/M
3300004125|Ga0066182_10049965Not Available937Open in IMG/M
3300004125|Ga0066182_10162607Not Available556Open in IMG/M
3300004128|Ga0066180_10468894Not Available502Open in IMG/M
3300004792|Ga0007761_11318568Not Available708Open in IMG/M
3300005580|Ga0049083_10029944All Organisms → Viruses → Predicted Viral1943Open in IMG/M
3300005940|Ga0073913_10001846All Organisms → Viruses → Predicted Viral2922Open in IMG/M
3300008448|Ga0114876_1001735All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae15807Open in IMG/M
3300008962|Ga0104242_1076874Not Available555Open in IMG/M
3300009152|Ga0114980_10008189All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae6818Open in IMG/M
3300009152|Ga0114980_10021319All Organisms → Viruses → Predicted Viral4045Open in IMG/M
3300009152|Ga0114980_10123507All Organisms → Viruses → Predicted Viral1542Open in IMG/M
3300009152|Ga0114980_10142345All Organisms → Viruses → Predicted Viral1424Open in IMG/M
3300009152|Ga0114980_10817274Not Available518Open in IMG/M
3300009159|Ga0114978_10003519All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes12793Open in IMG/M
3300009159|Ga0114978_10005114All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes10525Open in IMG/M
3300009159|Ga0114978_10052594All Organisms → Viruses → Predicted Viral2803Open in IMG/M
3300009159|Ga0114978_10274944All Organisms → Viruses → Predicted Viral1039Open in IMG/M
3300009159|Ga0114978_10429700Not Available786Open in IMG/M
3300009159|Ga0114978_10442403Not Available772Open in IMG/M
3300009159|Ga0114978_10568398Not Available658Open in IMG/M
3300009159|Ga0114978_10757538Not Available550Open in IMG/M
3300009160|Ga0114981_10209168All Organisms → Viruses → Predicted Viral1068Open in IMG/M
3300009160|Ga0114981_10714185Not Available530Open in IMG/M
3300009161|Ga0114966_10438035Not Available757Open in IMG/M
3300009164|Ga0114975_10334224Not Available835Open in IMG/M
3300009180|Ga0114979_10022189All Organisms → Viruses → Predicted Viral4045Open in IMG/M
3300009180|Ga0114979_10419384Not Available781Open in IMG/M
3300009180|Ga0114979_10655720Not Available597Open in IMG/M
3300009181|Ga0114969_10005839All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae9560Open in IMG/M
3300009183|Ga0114974_10003223All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes12413Open in IMG/M
3300009183|Ga0114974_10013571All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5877Open in IMG/M
3300009183|Ga0114974_10135956All Organisms → Viruses → Predicted Viral1549Open in IMG/M
3300009183|Ga0114974_10784695Not Available512Open in IMG/M
3300014050|Ga0119952_1029056All Organisms → Viruses → Predicted Viral1714Open in IMG/M
3300017701|Ga0181364_1033466Not Available829Open in IMG/M
3300017722|Ga0181347_1004329All Organisms → Viruses → Predicted Viral4749Open in IMG/M
3300017723|Ga0181362_1121063Not Available512Open in IMG/M
3300017761|Ga0181356_1040502All Organisms → Viruses → Predicted Viral1637Open in IMG/M
3300017777|Ga0181357_1267243Not Available590Open in IMG/M
3300017784|Ga0181348_1080443All Organisms → Viruses → Predicted Viral1293Open in IMG/M
3300017784|Ga0181348_1107767Not Available1082Open in IMG/M
3300017785|Ga0181355_1012235All Organisms → Viruses → Predicted Viral3769Open in IMG/M
3300017785|Ga0181355_1028771All Organisms → Viruses → Predicted Viral2403Open in IMG/M
3300018558|Ga0188836_100031All Organisms → Viruses → Predicted Viral3448Open in IMG/M
3300019096|Ga0188835_1012153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 37f726Open in IMG/M
3300019784|Ga0181359_1014776All Organisms → Viruses → Predicted Viral2874Open in IMG/M
3300020141|Ga0211732_1193499All Organisms → Viruses → Predicted Viral3092Open in IMG/M
3300020141|Ga0211732_1206189All Organisms → Viruses5096Open in IMG/M
3300020141|Ga0211732_1259731All Organisms → Viruses → Predicted Viral1550Open in IMG/M
3300020151|Ga0211736_10065395All Organisms → Viruses → Predicted Viral2755Open in IMG/M
3300020151|Ga0211736_10454338All Organisms → Viruses → Predicted Viral2427Open in IMG/M
3300020151|Ga0211736_10934823All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5394Open in IMG/M
3300020160|Ga0211733_10477083Not Available865Open in IMG/M
3300020161|Ga0211726_10014628All Organisms → Viruses → Predicted Viral1327Open in IMG/M
3300020161|Ga0211726_10869932All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CBM2878Open in IMG/M
3300020161|Ga0211726_10977446All Organisms → Viruses541Open in IMG/M
3300020172|Ga0211729_10062135All Organisms → Viruses976Open in IMG/M
3300020172|Ga0211729_10177544All Organisms → Viruses → Predicted Viral1373Open in IMG/M
3300020172|Ga0211729_11292590Not Available625Open in IMG/M
3300020205|Ga0211731_10389823Not Available595Open in IMG/M
3300021952|Ga0213921_1008939All Organisms → Viruses → Predicted Viral1906Open in IMG/M
3300021952|Ga0213921_1033165Not Available814Open in IMG/M
3300021956|Ga0213922_1034981Not Available1181Open in IMG/M
3300022407|Ga0181351_1012196All Organisms → Viruses → Predicted Viral3519Open in IMG/M
3300023174|Ga0214921_10112114All Organisms → Viruses → Predicted Viral1997Open in IMG/M
3300027393|Ga0209867_1028042Not Available818Open in IMG/M
3300027563|Ga0209552_1012561All Organisms → Viruses → Predicted Viral2598Open in IMG/M
3300027563|Ga0209552_1082095Not Available880Open in IMG/M
3300027578|Ga0255075_1052328Not Available735Open in IMG/M
3300027586|Ga0208966_1049168All Organisms → Viruses → Predicted Viral1205Open in IMG/M
3300027707|Ga0209443_1105018All Organisms → Viruses → Predicted Viral1067Open in IMG/M
3300027732|Ga0209442_1087063All Organisms → Viruses → Predicted Viral1278Open in IMG/M
3300027754|Ga0209596_1004532All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM0110568Open in IMG/M
3300027756|Ga0209444_10236538Not Available643Open in IMG/M
3300027759|Ga0209296_1001429Not Available18322Open in IMG/M
3300027759|Ga0209296_1002842All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes12093Open in IMG/M
3300027759|Ga0209296_1044532All Organisms → Viruses → Predicted Viral2354Open in IMG/M
3300027759|Ga0209296_1060191All Organisms → Viruses → Predicted Viral1945Open in IMG/M
3300027759|Ga0209296_1098472All Organisms → Viruses → Predicted Viral1402Open in IMG/M
3300027763|Ga0209088_10000293Not Available36407Open in IMG/M
3300027763|Ga0209088_10002690All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes10769Open in IMG/M
3300027763|Ga0209088_10005879Not Available6967Open in IMG/M
3300027763|Ga0209088_10020341All Organisms → Viruses → Predicted Viral3440Open in IMG/M
3300027763|Ga0209088_10044295All Organisms → Viruses → Predicted Viral2185Open in IMG/M
3300027763|Ga0209088_10232093Not Available774Open in IMG/M
3300027763|Ga0209088_10289175Not Available667Open in IMG/M
3300027772|Ga0209768_10446209Not Available502Open in IMG/M
3300027782|Ga0209500_10000241Not Available49971Open in IMG/M
3300027782|Ga0209500_10026462All Organisms → Viruses → Predicted Viral3312Open in IMG/M
3300027782|Ga0209500_10112312All Organisms → Viruses → Predicted Viral1333Open in IMG/M
3300027902|Ga0209048_10042672All Organisms → Viruses → Predicted Viral3756Open in IMG/M
3300027973|Ga0209298_10003245All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM019810Open in IMG/M
3300032156|Ga0315295_11461928Not Available660Open in IMG/M
3300033233|Ga0334722_10464546Not Available910Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake42.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake27.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater16.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater3.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.00%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand2.00%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment1.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.00%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000756Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011EnvironmentalOpen in IMG/M
3300001847Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM41. ROCA_DNA251_0.2um_TAP-D_2aEnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300003491Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300004123Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (version 2)EnvironmentalOpen in IMG/M
3300004125Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)EnvironmentalOpen in IMG/M
3300004128Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (version 2)EnvironmentalOpen in IMG/M
3300004792Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005940Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14EnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008962Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5EnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300018558Metatranscriptome of marine microbial communities from Baltic Sea - GS676_0p8EnvironmentalOpen in IMG/M
3300019096Metatranscriptome of marine microbial communities from Baltic Sea - GS676_0p1EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300021952Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MGEnvironmentalOpen in IMG/M
3300021956Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MGEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300027393Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027563Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027578Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8hEnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027707Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)EnvironmentalOpen in IMG/M
3300027732Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027756Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027772Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12421J11937_1000606593300000756Freshwater And SedimentMNNKDLQQFISAFDDFMKHFEVEELYHEGRMVYGNHRAEARRIQEQEIEKEASRLEITVDYYLAEFM*
RCM41_101334973300001847Marine PlanktonMNDKDLKDFIKAFDDFMKHYDVEQLYYEGRKVHEKYRAQSKKIMQKEIEKKAAQLEVTCDYYMMEFM*
JGI25908J49247_1002710233300003277Freshwater LakeMNNKDLQQFIEAFDDFMKHFEXEELYHEGRMVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEFM*
JGI25909J50240_104995233300003393Freshwater LakeMNNKDLQQFIEAFDDFMKHFEAEELYHEGRMVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEFM*
JGI25924J51412_105999313300003491Freshwater LakeAFDDFMKHFEVEELYHEGRMVYGNHRAEARRIQEQEIEKEASRLEITVDYYLAEFM*
Ga0066181_1023863313300004123Freshwater LakeMNNKDLQQFIEAFDDFMKHFEVEELYHEGRMVYENHSAEAKRIQEQEIEAKAAKLEVTVDYYMAEFM*
Ga0066182_1004996533300004125Freshwater LakeMNNKDLQQFIEAFDDFMKHFETEELYYEGRKVYGNHRAEAKKILEQEIEVKAAALEVTCDYYMAEFM*
Ga0066182_1016260713300004125Freshwater LakeDFMKHFEVEELYHEGRMVYGNHRAEARRIQEQEIEKEASRLEITVDYYLAEFM*
Ga0066180_1046889423300004128Freshwater LakeMNNKDLQQFIEAFDDFMKHFEVEELYHEGRMVYENHSAEAKRIQEQEIEAKAAKLEVTVDYYMAEFM**LIQIFL
Ga0007761_1131856833300004792Freshwater LakeMNNKDLQQFIEAFDDFMKHFEVEELYHEGRMVYGNHRAEARRIQEQEIEKEASRLEITVDYYLAEFM*
Ga0049083_1002994473300005580Freshwater LenticMNNKDLQQFIEAFDDFMKHFEVEELYHEGRMVYENHNAEAKRIQEQEIESKAAELEVTCDYYMMEFM*
Ga0073913_1000184633300005940SandMNNEDLQQFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEQEIESKAAELEVTCDYYMMEFM*
Ga0114876_1001735363300008448Freshwater LakeMNNKDLQEFIEAFDDFMKHFEVEELYYEGRKVYENHRAQAKHAMAQEIEQKAAELEVTCDYYMMEFM*
Ga0104242_107687423300008962FreshwaterMNNQDLQAFIMAFDDFMKHFDAEELYYEGRMVYENHLAEARRIQEQEIEAKAAELEVTCDYYMMEFM*
Ga0114980_10008189233300009152Freshwater LakeMNNEEIKSFIQAFGDFMEHFEAEELYYEGCKVYENHRAEARRIQEQEIEAKAAELEVTVDYYIAEFM*
Ga0114980_10021319113300009152Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEQEIESKAAELEVTCDYYMMEFM*
Ga0114980_1012350723300009152Freshwater LakeMNNHDLQEFIEAFDDFMKHFEAEELYYEGRMVYGNHRAEAKRIQEQEIEAKAAELEVTVDYYMAEFM*
Ga0114980_1014234523300009152Freshwater LakeMNNEDLQQFISAFDDFMKHFETEELYYEGRKVYENHKAEAHRIQAQEIESKAAQLEVTCDYYMMEFM*
Ga0114980_1081727423300009152Freshwater LakeMNNKDLQEFIVAFDDFMKHFETEELYYEGRMVYENHRAEARRIQEQEIEAKAAELEVTVDYYIAEFM*
Ga0114978_10003519133300009159Freshwater LakeMNNKDLQTFIAAFDDFMKHFDAEELYYDGRKVYENHRAEARRIQEEQIEAKAAELEVTCDYYMMEFM*
Ga0114978_10005114193300009159Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRMVYENHRAEALRIREEQIEAKAAELEITVDYYMAEFM*
Ga0114978_1005259463300009159Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEQEIESKAAALQITCDYYMAEFM*
Ga0114978_1027494443300009159Freshwater LakeMNNQDLQEFIEAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEAKAAELEVTVDYYMMEFM*
Ga0114978_1042970033300009159Freshwater LakeMNNKDLQEFIGAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEAKAAELEVTCDYYMMEFM*
Ga0114978_1044240343300009159Freshwater LakeDDFMKHFETEELYYEGRKVYENHRAEARRIQEEEIESKAAELEVTCDYYMMEFM*
Ga0114978_1056839823300009159Freshwater LakeMNNHDLQEFIEAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEFM*
Ga0114978_1075753813300009159Freshwater LakeMDLDLMYNKNMNNEDLQSFIEAFDDFMKHFETEELYYEGRKVYENHRAEAQRIQEQEIEAKAAELEVTVDYYIAEFM*
Ga0114981_1020916813300009160Freshwater LakeDLQEFLEEFDAFMKHFEAEELYYAGWMVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEFM*
Ga0114981_1071418533300009160Freshwater LakeMNNHDLQEFIEAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEAKAAELEVTVDYY
Ga0114966_1043803533300009161Freshwater LakeMNNEEIKSFIKAFEDFMEHFESEELYYEGRMVHEKHRSEAQRIQEQEIEALASKYEVTVDYYIAEFM*
Ga0114975_1033422423300009164Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEEEIESKAAELEVTCDYYMMEFM*
Ga0114979_10022189113300009180Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEAHRIQEQEIESKAAELEVTCDYYMMEFM*
Ga0114979_1041938413300009180Freshwater LakeMNNEEIKSFIKAFEDFMEHFESEELYYEGRMVHEKHCSEAQRIQEQEIEALASKYEVTVDYYIAEFM*
Ga0114979_1065572033300009180Freshwater LakeMNNQDLQEFIEAFDDFMKHFEAEELYYEGRMVYENHRAEARRIQEQEIEAKAAELEVTVDYYMMEFM*
Ga0114969_10005839163300009181Freshwater LakeMNNEDLQSFIKAFEDFMEHFESEELYYEGRMVHEKHRSEAQRIQEQEIEALASKYEVTVDYYIAEFM*
Ga0114974_10003223243300009183Freshwater LakeMNNEDLQSFIEAFDDFMKHFEVEELYYEGRKVYENHRTEAKMIQEQEIEALASKYEVTCDYIIQEFIL*
Ga0114974_10013571103300009183Freshwater LakeMNNEEIKSFIQAFEDFMEHFESEELYYEGCKVYENHRAEARRIQEQEIEAKAAELEVTVDYYIAEFM*
Ga0114974_1013595643300009183Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEEQIESKAAELEVTCDYYMMEFL*
Ga0114974_1078469523300009183Freshwater LakeYIEAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEAKAAKLEVTCDYYIMEFM*
Ga0119952_102905653300014050FreshwaterMNDRDLQQFIEAFDDFMKHFEVEELYYEGRKVYENHRAEAKRAIKEEIEEKASKLKVSSDYYIMEFM*
Ga0181364_103346623300017701Freshwater LakeMNNKDLQQFISAFDDFMKHFEVEELYHEGRMVYGNHRAEAKRIQEQEIEKEASRLEITVDYYLAEFM
Ga0181347_1004329103300017722Freshwater LakeMNNKDLQQFIEAFDDFMKHFEVEELYHEGRMVYENHSAEAKRIQEQEIEAKAAKLEVTVDYYMAEFM
Ga0181362_112106313300017723Freshwater LakeMNNKDLQQFIEAFDDFMKHFEVEELYHEGRIVYENHSAETECNKDQEIEAKAAKLEVSFHRSEEH
Ga0181356_104050223300017761Freshwater LakeMNNKDLQQFIEAFDDFMKHFEVEELYHEGRMVYENHRAEAKRIQEQEIESKAAALEVTCDYYMMEFM
Ga0181357_126724323300017777Freshwater LakeMNNKDLQQFIEAFDDFMKHFEAEELYHEGRMVYENHRTESKRIQEQEIESKAAALEVTCDYFMMEFM
Ga0181348_108044323300017784Freshwater LakeMNNNDLQEFIEAFDDFMKHFEAEELYHEGRMVYENHRTESKRIQEQEIESKAAALEVTCDYFMMEFM
Ga0181348_110776733300017784Freshwater LakeDDFMKHFEVEELYHEGRMVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEFM
Ga0181355_1012235133300017785Freshwater LakeFDDFMKHFEVEELYYEGRKVYENHRTEAKMIQEQEIEALASKYEVTCDYIIQEFIL
Ga0181355_102877193300017785Freshwater LakeMNNEDLQSFIEAFDDFMKHFEVEELYYEGRKVYENHRTEAKMIQEQEIEAKAAKLEVTVDYYMAEFM
Ga0188836_10003183300018558Freshwater LakeMNNKDLQKYIEAFDDFMKHFEAENLYYEGRMVYENHNAEAKRIQEQEIEKEASRLEITVDYYLAEFV
Ga0188835_101215313300019096Freshwater LakeMNNKDLQKYIEAFDDFMKHFEAENLYYEGRMVYENHNAEAKRIQEQEIEKEASRLEITV
Ga0181359_101477653300019784Freshwater LakeMNNKDLQEFIEAFDDFMKHFEVEELYYEGRKVYENHRTEAKMIQEQEIEALASKYEVTCDYIIQEFIL
Ga0211732_119349923300020141FreshwaterMNNKDLQEFIEAFDDFMKHFETEELYYEGRMVYENHRAEAKRIQEQEIEAKAAELEVTCDYYMMEFM
Ga0211732_1206189103300020141FreshwaterMKNEDLQSFIEAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEAKAAELEVTCDYYMMEFM
Ga0211732_125973123300020141FreshwaterMNNQDLQQFIETFDDFMKHFEVEELYYEGRKVYENHRAEAKRIQAQEIEKEASRLEITVDYYLAEFV
Ga0211736_1006539583300020151FreshwaterMNNKDLQQFIEAFDDFMKHFETEELYYEGRKVYENHKAEAKRILEQEIEVKAEELKVSSDYYIMEFM
Ga0211736_1045433823300020151FreshwaterMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEQEIEAKAAELEVTCDYYMMEFM
Ga0211736_10934823133300020151FreshwaterMNNKDLQQFIEAFDDFMKHFEAEELYYEGRQVYENHRAEARRIQEQEIESKAAELEVTCDYYMMEFM
Ga0211733_1047708323300020160FreshwaterMNNQDLQQFIEAFDDFMKHFEVEELYYEGRKVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEFV
Ga0211726_1001462813300020161FreshwaterMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEEQIEAKAAELEVTCDYYM
Ga0211726_1086993233300020161FreshwaterMNNEDLQSFITAFDDFMKHFEAEELYYEGRKVYENHRAEARRIQEEQIEQKAAELEVTCDYYIMEFM
Ga0211726_1097744633300020161FreshwaterFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEEQIEAKAAELEVTCDYYMMEFM
Ga0211729_1006213543300020172FreshwaterFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEQEIESKAAELEVTCDYYMMEFM
Ga0211729_1017754433300020172FreshwaterMNNEDLQQFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEQEIESKAAELEVTCDYYMMEFL
Ga0211729_1129259013300020172FreshwaterVMNNHDLQSFISAFDDFMKHFEAEELYYEGRMVYENHRAEARRIQEQEIESKAAELEVTVDYYMAEFM
Ga0211731_1038982323300020205FreshwaterMNNEDLQQFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEEQIEAKAAELEVTCDYYMMEFM
Ga0213921_100893953300021952FreshwaterMNNEDLQAFIEAFDDFMEHFESEEVYYEGRKVYENHRAQAKHAMVEEIEKKAAELEVTCDYYMMEFM
Ga0213921_103316523300021952FreshwaterMNNQDLQAFIMAFDDFMKHFDAEELYYEGRMVYENHLAEARRIQEQEIEAKAAELEVTCDYYMMEFM
Ga0213922_103498153300021956FreshwaterIMAFDDFMKHFDAEELYYEGRMVYENHLAEARRIQEQEIEAKAAELEVTCDYYMMEFM
Ga0181351_101219663300022407Freshwater LakeMNNKDLQQFIEAFDDFMKHFEVEELYHEGRMVYENHSAEAKRIQEQEIESKAAELEVTCDYYMMEFM
Ga0214921_1011211453300023174FreshwaterMNNEEIKSFIQAFEDFMEHFEAEELYYEGRMVNEKHRSEAQRIQEQEIEALASKYEVTVDYYIAEFM
Ga0209867_102804223300027393SandMNNEDLQQFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEQEIESKAAELEVTCDYYMMEFM
Ga0209552_101256183300027563Freshwater LakeMNNKDLQQFISAFDDFMKHFEVEELYHEGRMVYGNHRAEARRIQEQEIEKEASRLEITVDYYLAEFM
Ga0209552_108209533300027563Freshwater LakeMNNKDLQQFIEAFDDFMKHFETEELYYEGRKVYGNHRAEAKKILEQEIEVKAAALEVTCDYYMAEFM
Ga0255075_105232843300027578FreshwaterMNNNDLQEFIEAFDDFMKHFEAEELYYEGRMVYGNHRAEAKRIQEQEIEAKAAELEVTVDYY
Ga0208966_104916823300027586Freshwater LenticMNNKDLQQFIEAFDDFMKHFEAEELYHEGRMVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEFM
Ga0209443_110501813300027707Freshwater LakeMNNKDLQQFIEAFDDFMKHFEVEELYHEGRMVYENHNAEAKRIQEQEIESKAAELEVTCDYYMMEFM
Ga0209442_108706323300027732Freshwater LakeMNNKDLQQFIEAFDDFMKHFEVEELYHEGRMVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEFM
Ga0209596_1004532153300027754Freshwater LakeMNNEDLQSFIKAFEDFMEHFESEELYYEGRMVHEKHRSEAQRIQEQEIEALASKYEVTVDYYIAEFM
Ga0209444_1023653813300027756Freshwater LakeAFDDFMKHFEVEELYHEGRMVYGNHRAEARRIQEQEIEKEASRLEITVDYYLAEFM
Ga0209296_100142913300027759Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEEEIESKAAELEVTCDYYMMEFM
Ga0209296_1002842203300027759Freshwater LakeMNNEDLQSFIEAFDDFMKHFEVEELYYEGRKVYENHRTEAKMIQEQEIEALASKYEVTCDYIIQEFIL
Ga0209296_104453273300027759Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEEQIESKAAELEVTCDYYMMEFL
Ga0209296_106019123300027759Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEQEIESKAAELEVTCDYYMMEFM
Ga0209296_109847243300027759Freshwater LakeMNNEEIKSFIQAFEDFMEHFESEELYYEGCKVYENHRAEARRIQEQEIEAKAAELEVTVDYYIAEFM
Ga0209088_10000293333300027763Freshwater LakeMNNKDLQTFIAAFDDFMKHFDAEELYYDGRKVYENHRAEARRIQEEQIEAKAAELEVTCDYYMMEFM
Ga0209088_10002690313300027763Freshwater LakeMYNKNMNNEDLQSFIEAFDDFMKHFETEELYYEGRKVYENHRAEAQRIQEQEIEAKAAELEVTVDYYIAEFM
Ga0209088_10005879133300027763Freshwater LakeMNNHDLQEFIEAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEFM
Ga0209088_1002034183300027763Freshwater LakeMNNEDLQQFISAFDDFMKHFETEELYYEGRKVYENHKAEAHRIQAQEIESKAAQLEVTCDYYMMEFM
Ga0209088_1004429543300027763Freshwater LakeMNNKDLQEFIVAFDDFMKHFETEELYYEGRMVYENHRAEARRIQEQEIEAKAAELEVTVDYYIAEFM
Ga0209088_1023209333300027763Freshwater LakeMNNEDLQSFITAFDDFMKHFETEELYYEGRMVYENHRAEALRIREEQIEAKAAELEITVDYYMAEFM
Ga0209088_1028917513300027763Freshwater LakeMNNHDLQEFIEAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEAKAAELEVTVDYYMMEFM
Ga0209768_1044620913300027772Freshwater LakeMNNKDLQQFIEAFDDFMKHFEAEELYHEGRMVYENHRAEAKRIQEQEIEKEASRLEITVDYYLAEF
Ga0209500_1000024123300027782Freshwater LakeMNNHDLQEFIEAFDDFMKHFEAEELYYEGRMVYGNHRAEAKRIQEQEIEAKAAELEVTVDYYMAEFM
Ga0209500_1002646233300027782Freshwater LakeMNNQDLQEFIEAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEAKAAELEVTVDYYMMEFM
Ga0209500_1011231223300027782Freshwater LakeMNNKDLQEFIGAFDDFMKHFEAEELYYEGRMVYENHRAEAKRIQEQEIEAKAAELEVTCDYYMMEFM
Ga0209048_1004267273300027902Freshwater Lake SedimentMNNQDLQSFIEAFDDFMKHFEVEELYYEGRKVYEHDRAQARKIVEEEIEALASKYEVTCDYIIQEFIL
Ga0209298_10003245133300027973Freshwater LakeMNNEEIKSFIQAFGDFMEHFEAEELYYEGCKVYENHRAEARRIQEQEIEAKAAELEVTVDYYIAEFM
Ga0315295_1146192823300032156SedimentMNNEDLQSFITAFDDFMKHFETEELYYEGRKVYENHRAEARRIQEEQIESKAAELEVTCDYYMMEFM
Ga0334722_1046454633300033233SedimentMNNEDLQSFISAFDDFMKHFETEELYYEGRMVYENHRAEARRIQEQEIESKAAALEVTCDYYMAEFM

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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