NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104358

Metagenome Family F104358

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104358
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 75 residues
Representative Sequence MNMLEVIVKGADEAARRDPPPDTPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSEAWTKWNSRR
Number of Associated Samples 74
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 8.00 %
% of genes near scaffold ends (potentially truncated) 37.00 %
% of genes from short scaffolds (< 2000 bps) 81.00 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (61.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(17.000 % of family members)
Environment Ontology (ENVO) Unclassified
(87.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(92.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.27%    β-sheet: 13.59%    Coil/Unstructured: 62.14%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF06233Usg 18.00
PF03544TonB_C 9.00
PF08281Sigma70_r4_2 5.00
PF03681Obsolete Pfam Family 5.00
PF15919HicB_lk_antitox 4.00
PF00593TonB_dep_Rec 2.00
PF03972MmgE_PrpD 1.00
PF00291PALP 1.00
PF02416TatA_B_E 1.00
PF07715Plug 1.00
PF13420Acetyltransf_4 1.00
PF00685Sulfotransfer_1 1.00
PF00561Abhydrolase_1 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 9.00
COG1826Twin-arginine protein secretion pathway components TatA and TatBIntracellular trafficking, secretion, and vesicular transport [U] 1.00
COG20792-methylcitrate dehydratase PrpDCarbohydrate transport and metabolism [G] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.00 %
UnclassifiedrootN/A39.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003320|rootH2_10261587Not Available1201Open in IMG/M
3300005328|Ga0070676_10263291All Organisms → cellular organisms → Bacteria → Proteobacteria1155Open in IMG/M
3300005329|Ga0070683_101174862All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae737Open in IMG/M
3300005329|Ga0070683_101292605Not Available701Open in IMG/M
3300005331|Ga0070670_100880902All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium811Open in IMG/M
3300005331|Ga0070670_101103052All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae724Open in IMG/M
3300005333|Ga0070677_10888650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium514Open in IMG/M
3300005334|Ga0068869_100356839Not Available1193Open in IMG/M
3300005334|Ga0068869_101791968All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium549Open in IMG/M
3300005335|Ga0070666_10170752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1523Open in IMG/M
3300005335|Ga0070666_10273464All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1199Open in IMG/M
3300005335|Ga0070666_10796490Not Available696Open in IMG/M
3300005347|Ga0070668_100730707Not Available875Open in IMG/M
3300005367|Ga0070667_100153775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2022Open in IMG/M
3300005367|Ga0070667_101804825All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium575Open in IMG/M
3300005434|Ga0070709_10684552Not Available797Open in IMG/M
3300005455|Ga0070663_100604051Not Available923Open in IMG/M
3300005455|Ga0070663_101517558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium596Open in IMG/M
3300005456|Ga0070678_100009263All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium5953Open in IMG/M
3300005459|Ga0068867_100071261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2599Open in IMG/M
3300005466|Ga0070685_10560300All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae817Open in IMG/M
3300005539|Ga0068853_100690294All Organisms → cellular organisms → Bacteria → Proteobacteria973Open in IMG/M
3300005548|Ga0070665_100061329All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3769Open in IMG/M
3300005548|Ga0070665_100062222All Organisms → cellular organisms → Bacteria → Proteobacteria3743Open in IMG/M
3300005576|Ga0066708_10074364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1964Open in IMG/M
3300005614|Ga0068856_100667822All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300005616|Ga0068852_101121484All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium807Open in IMG/M
3300005719|Ga0068861_100198687Not Available1682Open in IMG/M
3300005841|Ga0068863_101551599Not Available671Open in IMG/M
3300005842|Ga0068858_100043765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium4151Open in IMG/M
3300005843|Ga0068860_100059430All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium3634Open in IMG/M
3300005844|Ga0068862_100400178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1284Open in IMG/M
3300009093|Ga0105240_10034578All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6517Open in IMG/M
3300009098|Ga0105245_10067842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3231Open in IMG/M
3300009101|Ga0105247_11463990All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium555Open in IMG/M
3300009174|Ga0105241_10099085Not Available2314Open in IMG/M
3300009174|Ga0105241_10557692Not Available1029Open in IMG/M
3300009174|Ga0105241_10625003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium975Open in IMG/M
3300009177|Ga0105248_12897666Not Available547Open in IMG/M
3300009545|Ga0105237_10216734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1914Open in IMG/M
3300009545|Ga0105237_10392045Not Available1393Open in IMG/M
3300009551|Ga0105238_10442909All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1295Open in IMG/M
3300009551|Ga0105238_12805264Not Available524Open in IMG/M
3300009553|Ga0105249_10245739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1771Open in IMG/M
3300009553|Ga0105249_13439318Not Available510Open in IMG/M
3300009553|Ga0105249_13465950All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300010375|Ga0105239_10815077All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1070Open in IMG/M
3300010375|Ga0105239_11347459Not Available823Open in IMG/M
3300010400|Ga0134122_12371953Not Available577Open in IMG/M
3300012210|Ga0137378_11613214All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium557Open in IMG/M
3300012359|Ga0137385_10101049All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2556Open in IMG/M
3300012923|Ga0137359_11253944Not Available629Open in IMG/M
3300012924|Ga0137413_11246700All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium595Open in IMG/M
3300012927|Ga0137416_11855137Not Available551Open in IMG/M
3300013297|Ga0157378_10144386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2212Open in IMG/M
3300013297|Ga0157378_11573411Not Available703Open in IMG/M
3300013306|Ga0163162_10052067All Organisms → cellular organisms → Bacteria4110Open in IMG/M
3300013306|Ga0163162_12991075Not Available543Open in IMG/M
3300013307|Ga0157372_10702366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1177Open in IMG/M
3300013308|Ga0157375_10459988All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1438Open in IMG/M
3300014325|Ga0163163_10964640Not Available916Open in IMG/M
3300014325|Ga0163163_12219234Not Available608Open in IMG/M
3300014325|Ga0163163_12643365Not Available559Open in IMG/M
3300020579|Ga0210407_11276261Not Available549Open in IMG/M
3300021088|Ga0210404_10298181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium886Open in IMG/M
3300021170|Ga0210400_10080875Not Available2553Open in IMG/M
3300021178|Ga0210408_11276279Not Available558Open in IMG/M
3300025899|Ga0207642_10501953All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300025903|Ga0207680_10219635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1302Open in IMG/M
3300025904|Ga0207647_10312055All Organisms → cellular organisms → Bacteria → Proteobacteria894Open in IMG/M
3300025908|Ga0207643_10065829All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2077Open in IMG/M
3300025911|Ga0207654_10191051Not Available1342Open in IMG/M
3300025911|Ga0207654_10424185All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium929Open in IMG/M
3300025913|Ga0207695_10173602All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2079Open in IMG/M
3300025914|Ga0207671_10644025Not Available844Open in IMG/M
3300025914|Ga0207671_10652483Not Available838Open in IMG/M
3300025924|Ga0207694_10129707All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2020Open in IMG/M
3300025924|Ga0207694_10258091All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1427Open in IMG/M
3300025925|Ga0207650_10427716All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1099Open in IMG/M
3300025925|Ga0207650_10925375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria740Open in IMG/M
3300025927|Ga0207687_11484011Not Available582Open in IMG/M
3300025934|Ga0207686_10578625All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium881Open in IMG/M
3300025941|Ga0207711_10008302All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium8692Open in IMG/M
3300025942|Ga0207689_11328349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium604Open in IMG/M
3300025961|Ga0207712_10877226Not Available792Open in IMG/M
3300026023|Ga0207677_11068324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium735Open in IMG/M
3300026023|Ga0207677_11155263All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium708Open in IMG/M
3300026035|Ga0207703_11532769Not Available641Open in IMG/M
3300026041|Ga0207639_11023523All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300026088|Ga0207641_10877721Not Available890Open in IMG/M
3300026095|Ga0207676_10323683All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1416Open in IMG/M
3300026116|Ga0207674_11994490Not Available545Open in IMG/M
3300026118|Ga0207675_100778468Not Available969Open in IMG/M
3300026320|Ga0209131_1290915Not Available614Open in IMG/M
3300026555|Ga0179593_1190122All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1759Open in IMG/M
3300028379|Ga0268266_10750740Not Available941Open in IMG/M
3300028379|Ga0268266_10785553Not Available919Open in IMG/M
3300028380|Ga0268265_10574615All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1073Open in IMG/M
3300028381|Ga0268264_10139199All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2162Open in IMG/M
3300028381|Ga0268264_11374512All Organisms → cellular organisms → Bacteria717Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere17.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere15.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere12.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere8.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere7.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.00%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003320Sugarcane root Sample H2Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
rootH2_1026158723300003320Sugarcane Root And Bulk SoilMNRLEVIARGADRGARHDDLPAAIPAPCPFCGSDPPLAAAIGGRFIVGCESDDCHVNPQVSGSDLSEAWARWNKRPNKL*
Ga0070676_1026329123300005328Miscanthus RhizosphereMNMLEVIVAGAAEAARRDPRPIVALTCLFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVAEAWAKWNKRA*
Ga0070683_10117486223300005329Corn RhizosphereMNMLEVIVKGAETAPLHGPPLVCPFCGNDPPLATQLHGRFLVGCESDDCHVNPQVSGQSLSEAWARWNRRQEKRSS*
Ga0070683_10129260523300005329Corn RhizosphereMNMLEVIVAGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCPANPQVSGQSVSEAWTKWNSRR*
Ga0070670_10088090213300005331Switchgrass RhizosphereMNMLEVIVKGAEQAARRDPRPVIPLRCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVSEAWTKWNSRR*
Ga0070670_10110305223300005331Switchgrass RhizosphereMNMLEVIVKGAERAALRGPPLSCPFCGSDPPLATQLHGRFIVGCESDDCHVNPQVSGQSLGEAWARWNKRREKRGI*
Ga0070677_1088865013300005333Miscanthus RhizosphereKGADEAARRDPPPATPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSDAWGKWNSRR*
Ga0068869_10035683923300005334Miscanthus RhizosphereMLEVIVRGADQAARHDPPSRASRDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGDSVGEAWARWNRRHVERQTRRPTEPS*
Ga0068869_10179196823300005334Miscanthus RhizosphereMNMLEVIVKGADEAARRDPPPDTPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSDAWVKWNSRR*
Ga0070666_1017075223300005335Switchgrass RhizosphereMNMLEVIVKGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVSEAWTKWNSRR*
Ga0070666_1027346413300005335Switchgrass RhizosphereMNMLEVIVAGAAEAARRDPRPIVALTCPFCGCDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVAEAWAKWN
Ga0070666_1079649013300005335Switchgrass RhizosphereMLEAIVRGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLEEAWARWNRRHVGRQTGRPTERS*
Ga0070668_10073070723300005347Switchgrass RhizosphereMNMLEVIVNGAETPARHDPPPAVPHFAGTAPCPFCGSDPPLATQLHGRFIVGCESDDCHINPQVSGQSLGEAWARWNKRQEKRGS*
Ga0070667_10015377543300005367Switchgrass RhizosphereMNMLEVIVAGAAEAARRDPRPIVALTCPFCGCDPPLAAQIAGCFIVGCDSDDCHANPQVSGQSVAEAWAKWNSRA*
Ga0070667_10180482523300005367Switchgrass RhizosphereMLEVIVKGAEQAARRDPRPVIPLRCPFCGSDPPLASQIAGRFIVGCDSDDCPANPQVSGQSVSEAWTKWNSRR*
Ga0070709_1068455213300005434Corn, Switchgrass And Miscanthus RhizosphereMNMLEVIVEGAAGPPSLADGQAARHSPQRLPLACPFCGSDPPLAAEIAGRFIVGCESDDCHVNPQVSGSDLSEAWTRWNKRPSA*
Ga0070663_10060405113300005455Corn RhizosphereMNMLEVIVAGAAEAARRDPRSIAALTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVS
Ga0070663_10151755813300005455Corn RhizosphereMNMLEVIVKGADEAARRDPPPDTPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSEAWTKWNSRR*
Ga0070678_10000926363300005456Miscanthus RhizosphereMNMLEVIVKGADEAARRDPPPATPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSDAWGKWNSRR*
Ga0068867_10007126163300005459Miscanthus RhizosphereMNMLEVIVKGADEAARRDPPPATPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSDAWVKWNSRR*
Ga0070685_1056030023300005466Switchgrass RhizosphereMNMLEVIVKGAERAALRGPPLSCPFCGSDPPLATQLHGRFIVGCESDDCHVNPQVSGQSLGEAWARWNKRQEKRRI*
Ga0068853_10069029413300005539Corn RhizosphereMNMLEVIVKGAETPSRPPLACPFCGSDPPLATQLHGRFLVGCENDDCHVNPQ
Ga0070665_10006132953300005548Switchgrass RhizosphereMNMLEVIVKGAERAALRGPPLSCPFCGSDPPLATQLHGRFIVGCESDDCHVNPQVSGQSLGEAWARWNKRQEKRGI*
Ga0070665_10006222233300005548Switchgrass RhizosphereMNMLEVIVAGAAEAARRDPRPIVALTCPFCRCDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVAEAWAKWNKRA*
Ga0066708_1007436463300005576SoilMNMLQVIVAGAAESARCERPAATPLTCPFCGADPPLAAGIAGKFIVGCESDDCAANPQVSGPTVSAAWERWNLRR*
Ga0068856_10066782243300005614Corn RhizosphereFPAMNMLEVIVKGAEEAARRERPLAIPLTCPFCGTDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVAEAWAKWNSRA*
Ga0068852_10112148413300005616Corn RhizosphereMNMLEVIVAGAAEAARRDPRSIAALTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSV
Ga0068861_10019868723300005719Switchgrass RhizosphereMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLEEAWARWNRRHVGRQTGRQAKA*
Ga0068863_10155159923300005841Switchgrass RhizosphereMNMLEVIVKGADEAARRDPPPATPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVS
Ga0068858_100043765103300005842Switchgrass RhizosphereADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLEEAWARWNRRHVGRQTGRQAKA*
Ga0068860_10005943093300005843Switchgrass RhizosphereMNMLEVIVAGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVSEAWTKWNSRR*
Ga0068862_10040017833300005844Switchgrass RhizosphereMNMLEVIVKGAERAALRGPPLSCPFCGSDPPLATQLHGRFIVGCESDDCHVNPQVSGQSLGEAW
Ga0105240_1003457823300009093Corn RhizosphereMNMLEVIVSGADTAARRDTPLSCPFCGADPPLAAQMHGRFIVGCESDDCHVNPQVSGQSLGEAWARWNRRPSA*
Ga0105245_1006784273300009098Miscanthus RhizosphereMNMLEVIVAGAAEAARRDPRPIVALTCPFCRCDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVAEAWAKWNSRA*
Ga0105247_1146399013300009101Switchgrass RhizosphereMNMLEVIVAGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVVCDSDDCPANPQVSGQSVSEAWTKWNSRR*
Ga0105241_1009908543300009174Corn RhizosphereMNMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASVGEAWARWNRRHVGRQTGRQAKA*
Ga0105241_1055769213300009174Corn RhizosphereMLEVIVSGADTAARRDTPLSCPFCGADPPLAAQMHGRFIVGCESDDCHVNPQVSGQSLGEAWARWNRRPSA*
Ga0105241_1062500333300009174Corn RhizosphereMNMLEVIVKGAEQAARRDPRPVIPLRCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQ
Ga0105248_1289766623300009177Switchgrass RhizosphereMNMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLE
Ga0105237_1021673443300009545Corn RhizosphereMNMLEVIVAGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVSDAWGKWNSRR*
Ga0105237_1039204523300009545Corn RhizosphereMNMLEVIARGAAGPPSPIDRKAARHSSPPLACPFCGSDPPLAAEIAGRFIVGCESDDCHVNPQVSGPNLGEAWARWNKRQP*
Ga0105238_1044290923300009551Corn RhizosphereMNMLEVIVAGAAEAARHERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCPANPQVSGQSVSEAWTKWNSRR*
Ga0105238_1280526423300009551Corn RhizosphereDQAARHDPPSRASRDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLEEAWARWNRRHVGRQTGRQAKA*
Ga0105249_1024573923300009553Switchgrass RhizosphereMNMLEVIVKGAERAALRGPPLSCPFCGSDPPLATQLHGRFIVGCESDDCHVNPQVSGQSLGEAWGRWNKRQEKRGI*
Ga0105249_1343931813300009553Switchgrass RhizosphereMNMLEVIVRGADQAARHDPPSRASRDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLE
Ga0105249_1346595013300009553Switchgrass RhizosphereKGAEEAAPRERPLAIPLTCPFCGTDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVAEAWAKWNSRA*
Ga0105239_1081507743300010375Corn RhizosphereMNMLEVIVKGAEQAARRDPRPVIPLRCPFCGSDPPLASQIAGRFIVGCDSDDCPANPQVSGQSVSEAWTKWNSRR*
Ga0105239_1134745913300010375Corn RhizosphereRGADQAARHDPPSRASRDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGDSVGEAWARWNRRHVERQTRRPTEPS*
Ga0134122_1237195323300010400Terrestrial SoilMNMLEVIVKGADEAARRDPPPDTPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSDAWAKWNSRR*
Ga0137378_1161321413300012210Vadose Zone SoilMNMLQVIVAGAAESARCERPAATPLTCPFCGADPPLAAGIAGKFIVGCESDDCAANPQVSGPTVSAAWERWNLRRP*
Ga0137385_1010104913300012359Vadose Zone SoilMNMLQVIVAGAAESARCERPAATPLTCPFCGTDPPLAAGIAGKFIVGCESDDCAANPQVSGPTVSAAWERWNLRRP*
Ga0137359_1125394423300012923Vadose Zone SoilMNMLEVIVRGAAEAARRERPPDEPKPCPFCGTDPPLAAQIAGRFVVGCESDGCAANPQVSAASVGAPWSRW
Ga0137413_1124670023300012924Vadose Zone SoilMNMLQVIVAGAAENARREQPALCPFCGSDPPLAAQIAGKFIVGCESDDCAANPQVSGSTVSAAWERWNARAP*
Ga0137416_1185513713300012927Vadose Zone SoilMNMLQVIVKGAAESAPSERPAPCPFCGTDPPLAAQIASKFVVGCESEDCTANPQVSGQTLCDAWERWNMRA*
Ga0157378_1014438613300013297Miscanthus RhizosphereMNMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGDS
Ga0157378_1157341113300013297Miscanthus RhizosphereMNMLEVIVRGADQAARHDPPSRASRDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGDSVGEAWARWNRRHVERQTR
Ga0163162_1005206723300013306Switchgrass RhizosphereMNMLEVIVRGAEESARSERPSALSLPCPFCGTDPPLAARIAGRFVVGCEDEDCAANPQVSGASVSDAWNNWNKRAR*
Ga0163162_1299107513300013306Switchgrass RhizosphereMNMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASVGEAWARWNRRHVGRQTGRPTERS*
Ga0157372_1070236633300013307Corn RhizosphereMNMLEAIVKGAETAPLHGPPLVCPFCGNDPPLATQLHGRFLVGCESDDCHVNPQVSGQSLSEAWARWNRRQEKRSS*
Ga0157375_1045998823300013308Miscanthus RhizosphereMNMLEVIVKGADEAARRDPPPDTPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSDAWGKWNSRR*
Ga0163163_1096464013300014325Switchgrass RhizosphereMNMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASVGEAWARWNRR
Ga0163163_1221923423300014325Switchgrass RhizosphereVIVKGADQAARHDPLSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASVGEAWARWNRRHVGRQTGRPTERS*
Ga0163163_1264336523300014325Switchgrass RhizosphereAMNMLEVIVKGAERAALRGPPLSCPFCGSDPPLATQLHGRFIVGCESDDCHVNPQVSGQSLGEAWARWNKRREKRGI*
Ga0210407_1127626113300020579SoilMNMLEIIVRGADGAARCDPPPAIPLSCPFCGTEPPLAAQIAGRFIVGCESDDCHVNPQVSGLSLGEAWARWNKRQT
Ga0210404_1029818113300021088SoilMNMLEIIVRGADGAARRDPPPAIPLSCPFCGTEPPLAAQIAGRFIVGCESDDCHVNPQVSGQSLGEAWARWNKRQT
Ga0210400_1008087573300021170SoilMNMLEIIVRGADGAARCDPPPAIPLSCPFCGTEPPLAAQIAGRFIVGCESDDCHVNPQVSGQSLGEAWARWNKRQT
Ga0210408_1127627913300021178SoilQKQVCLLTVCKHSCTVRLMNMLEIIVRGADGAARRDPPPAIPLSCPFCGTEPPLAAQIAGRFIVGCESDDCHVNPQVSGQSLGEAWARWNKRQT
Ga0207642_1050195323300025899Miscanthus RhizosphereMNMLEVIVKGADEAARRDPPPATPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSDAWGKWNSRR
Ga0207680_1021963523300025903Switchgrass RhizosphereMNMLEVIVKGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVSEAWTKWNSRR
Ga0207647_1031205513300025904Corn RhizosphereMNMLEVIVKGAETAPLHGPPLVCPFCGNDPPLATQLHGRFLVGCESDDCHVNPQVSGQSLSEAWARWNRRQEKRSS
Ga0207643_1006582913300025908Miscanthus RhizosphereMNMLEVIVAGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCPANPQVSGQSVS
Ga0207654_1019105113300025911Corn RhizosphereMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESD
Ga0207654_1042418513300025911Corn RhizosphereKGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCPANPQVSGQSVSEAWTKWNSRR
Ga0207695_1017360233300025913Corn RhizosphereMNMLEVIVSGADTAARRDTPLSCPFCGADPPLAAQMHGRFIVGCESDDCHVNPQVSGQSLGEAWARWNRRPSA
Ga0207671_1064402523300025914Corn RhizosphereLLTAYKRSCIVPVMNMLEVIVSGADTAARRDTPLSCPFCGADPPLAAQMHGRFIVGCESDDCHVNPQVSGQSLGEAWARWNRRPSA
Ga0207671_1065248313300025914Corn RhizosphereMNMLEVIVAGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVSEAWTKWNS
Ga0207694_1012970733300025924Corn RhizosphereMNMLEVIVAGAAEAARRDPRPIVALTCPFCGCDPPLAAQIAGCFIVGCDSDDCHANPQVSGQSVAEAWAKWNSRA
Ga0207694_1025809123300025924Corn RhizosphereMNMLEVIVAGAAEAARHERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCPANPQVSGQSVSEAWTKWNSRR
Ga0207650_1042771613300025925Switchgrass RhizosphereMNMLEVIVAGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCPANPQVSGQSVSEAWTKWNSRR
Ga0207650_1092537523300025925Switchgrass RhizosphereMNMLEVIVKGAERAALRGPPLSCPFCGSDPPLATQLHGRFIVGCESDDCHVNPQVSGQSLGEAWARWNKRREKRGI
Ga0207687_1148401123300025927Miscanthus RhizosphereMNMLEVIVKGADEAARRDPPPATPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSDAWGKWNS
Ga0207686_1057862513300025934Miscanthus RhizosphereMNMLEVIVAGAAEAARRDPRPIVALTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVAEAWAK
Ga0207711_1000830263300025941Switchgrass RhizosphereMLEVIVRGADQAARHDPPSRASRDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLEEAWARWNRRHVGRQTGRPTERS
Ga0207689_1132834913300025942Miscanthus RhizosphereMNMLEVIVKGADEAARRDPPPDTPLACPFCGSDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVSDAWVKWNSRR
Ga0207712_1087722623300025961Switchgrass RhizosphereMLEVIVRGADQAARHDPPSRASRDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLEEAWARWNRRHVGRQTGRQAKA
Ga0207677_1106832413300026023Miscanthus RhizosphereEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCPANPQVSGQSVSEAWTKWNSRR
Ga0207677_1115526323300026023Miscanthus RhizosphereMNMLEVIVKGADEAARRDPPPATPLACPFCGSDPPLAAQIAGRFIVCCDSDDCHANPQVSGQSVSDAWVKWNSRR
Ga0207703_1153276913300026035Switchgrass RhizosphereMNMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQ
Ga0207639_1102352323300026041Corn RhizosphereMFPAMNMLEVIVKGAEEAARRERPLAIPLTCPFCGTDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVAEAWAKWNSRA
Ga0207641_1087772123300026088Switchgrass RhizosphereMNMLEVIVKGAEQAARRDPRPVIPLRCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVSEAW
Ga0207676_1032368333300026095Switchgrass RhizosphereMNMLEVIVAGAAEAARRDPRPIVALTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVSEAWTKWNSRR
Ga0207674_1199449023300026116Corn RhizosphereMNMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAAIAGRFIVGCESDACH
Ga0207675_10077846813300026118Switchgrass RhizosphereMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLEEAWARWNRRHVGRQTGRQAKA
Ga0209131_129091523300026320Grasslands SoilMNMLQVIVKGAAESAPSERPAPCPFCGTDPPLAAQIASKFVVGCESEDCTANPQVSGQTLCDAWERWNMRA
Ga0179593_119012233300026555Vadose Zone SoilMNMLQVIVAGAAESARRERPAPCPFCGTDPPLAAQIAGKFIVGCESDDCAANPQVSGSTVSAAWERWNGAGAL
Ga0268266_1075074023300028379Switchgrass RhizosphereMNMLEVIVRGADQAARHDPPSRASRDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGDSVGEAWARWNRRHVERQTRRPTEPS
Ga0268266_1078555323300028379Switchgrass RhizosphereMNMLEVIVAGAAEAARRDPRPIVALTCPFCRCDPPLAAQIAGRFIVGCDSDDCHANPQVSGQSVAEAWAKWNKRA
Ga0268265_1057461533300028380Switchgrass RhizosphereMNMLEVIVKGAERAALRGPPLSCPFCGSDPPLATQLHGRFIVGCESDDCHVNPQVSGQSLSEAW
Ga0268264_1013919923300028381Switchgrass RhizosphereMNMLEVIVAGATEAARRERPPAIPLTCPFCGSDPPLASQIAGRFIVGCDSDDCHANPQVSGQSVSEAWTKWNSRR
Ga0268264_1137451223300028381Switchgrass RhizosphereMNMLEVIVKGADQAARHDPPSRASHDIPLACPFCGADPPLAAGIAGRFIVGCESDACHVNPQVSGASLEEAWARWNRRHVARQTGRPTERS

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.