NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F104334

Metagenome Family F104334

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104334
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 75 residues
Representative Sequence MARNREALNRILRRGEDAGLLVSAAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTV
Number of Associated Samples 85
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 92.59 %
% of genes near scaffold ends (potentially truncated) 80.00 %
% of genes from short scaffolds (< 2000 bps) 81.00 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (93.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(14.000 % of family members)
Environment Ontology (ENVO) Unclassified
(40.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(32.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 38.61%    β-sheet: 0.00%    Coil/Unstructured: 61.39%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF03524CagX 7.00
PF02195ParBc 1.00
PF01055Glyco_hydro_31 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG3504Type IV secretory pathway, VirB9 componentsIntracellular trafficking, secretion, and vesicular transport [U] 7.00
COG1501Alpha-glucosidase/xylosidase, GH31 familyCarbohydrate transport and metabolism [G] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A93.00 %
All OrganismsrootAll Organisms7.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005434|Ga0070709_11407073Not Available565Open in IMG/M
3300005534|Ga0070735_10268712All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium1032Open in IMG/M
3300005718|Ga0068866_10963667Not Available604Open in IMG/M
3300005949|Ga0066791_10088536Not Available620Open in IMG/M
3300006028|Ga0070717_12075766Not Available512Open in IMG/M
3300006059|Ga0075017_101125490Not Available614Open in IMG/M
3300006162|Ga0075030_100866546Not Available713Open in IMG/M
3300009176|Ga0105242_12021680Not Available619Open in IMG/M
3300009616|Ga0116111_1153803Not Available545Open in IMG/M
3300009623|Ga0116133_1229100Not Available505Open in IMG/M
3300009632|Ga0116102_1186040Not Available561Open in IMG/M
3300009640|Ga0116126_1213628Not Available616Open in IMG/M
3300009643|Ga0116110_1156599Not Available751Open in IMG/M
3300009651|Ga0105859_1298885Not Available504Open in IMG/M
3300009759|Ga0116101_1191218Not Available518Open in IMG/M
3300009824|Ga0116219_10331048Not Available855Open in IMG/M
3300014152|Ga0181533_1301757Not Available581Open in IMG/M
3300014156|Ga0181518_10174033Not Available1136Open in IMG/M
3300014160|Ga0181517_10455942Not Available650Open in IMG/M
3300014164|Ga0181532_10374132Not Available795Open in IMG/M
3300014164|Ga0181532_10432701Not Available727Open in IMG/M
3300014490|Ga0182010_10718808Not Available563Open in IMG/M
3300014491|Ga0182014_10206321Not Available1058Open in IMG/M
3300014491|Ga0182014_10308063Not Available811Open in IMG/M
3300014491|Ga0182014_10479066Not Available612Open in IMG/M
3300014492|Ga0182013_10234040Not Available1076Open in IMG/M
3300014496|Ga0182011_10745644Not Available615Open in IMG/M
3300014496|Ga0182011_10982624Not Available523Open in IMG/M
3300014502|Ga0182021_12894984Not Available576Open in IMG/M
3300014839|Ga0182027_10846751Not Available952Open in IMG/M
3300014839|Ga0182027_11030884Not Available840Open in IMG/M
3300014839|Ga0182027_11881706Not Available576Open in IMG/M
3300017929|Ga0187849_1297300Not Available605Open in IMG/M
3300017931|Ga0187877_1377021Not Available537Open in IMG/M
3300017946|Ga0187879_10376797Not Available786Open in IMG/M
3300017946|Ga0187879_10415553Not Available745Open in IMG/M
3300017948|Ga0187847_10537558Not Available650Open in IMG/M
3300017948|Ga0187847_10715715Not Available564Open in IMG/M
3300017988|Ga0181520_10190575All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1621Open in IMG/M
3300018025|Ga0187885_10434513Not Available587Open in IMG/M
3300018035|Ga0187875_10208696Not Available1076Open in IMG/M
3300018043|Ga0187887_10865094Not Available535Open in IMG/M
3300018046|Ga0187851_10736507Not Available555Open in IMG/M
3300018047|Ga0187859_10794402Not Available543Open in IMG/M
3300018057|Ga0187858_10413003Not Available837Open in IMG/M
3300018057|Ga0187858_10727047Not Available591Open in IMG/M
3300019788|Ga0182028_1476619All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1779Open in IMG/M
3300021171|Ga0210405_10745784Not Available754Open in IMG/M
3300021181|Ga0210388_11430038Not Available580Open in IMG/M
3300021404|Ga0210389_10958430Not Available665Open in IMG/M
3300021433|Ga0210391_10736812Not Available772Open in IMG/M
3300021478|Ga0210402_11366523Not Available636Open in IMG/M
3300025928|Ga0207700_10904528All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300026281|Ga0209863_10023665All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1880Open in IMG/M
3300027869|Ga0209579_10132066All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1328Open in IMG/M
3300027911|Ga0209698_10690697Not Available778Open in IMG/M
3300029916|Ga0302148_1195062Not Available572Open in IMG/M
3300030399|Ga0311353_10833011Not Available785Open in IMG/M
3300030503|Ga0311370_11162226Not Available841Open in IMG/M
3300031236|Ga0302324_102845244Not Available581Open in IMG/M
3300031344|Ga0265316_10338672Not Available1090Open in IMG/M
3300031524|Ga0302320_10935376Not Available932Open in IMG/M
3300031524|Ga0302320_10979697Not Available901Open in IMG/M
3300031708|Ga0310686_117434115Not Available917Open in IMG/M
3300031788|Ga0302319_11209482Not Available698Open in IMG/M
3300031902|Ga0302322_103564587Not Available533Open in IMG/M
3300031938|Ga0308175_100917619Not Available964Open in IMG/M
3300032828|Ga0335080_10883904Not Available918Open in IMG/M
3300032828|Ga0335080_11796772Not Available599Open in IMG/M
3300032828|Ga0335080_11852669Not Available588Open in IMG/M
3300032892|Ga0335081_12485155Not Available536Open in IMG/M
3300033134|Ga0335073_11164914Not Available778Open in IMG/M
3300033158|Ga0335077_10885941Not Available901Open in IMG/M
3300033402|Ga0326728_10504881Not Available981Open in IMG/M
3300033402|Ga0326728_10957720Not Available599Open in IMG/M
3300033405|Ga0326727_10803282Not Available725Open in IMG/M
3300033561|Ga0371490_1025700All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1934Open in IMG/M
3300033798|Ga0334821_049904Not Available833Open in IMG/M
3300033819|Ga0334816_079435Not Available606Open in IMG/M
3300033827|Ga0334848_097972Not Available519Open in IMG/M
3300033887|Ga0334790_234518Not Available514Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland14.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil11.00%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog10.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog8.00%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen8.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland6.00%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds4.00%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog4.00%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.00%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.00%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil1.00%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005949Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009640Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009651Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063EnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014658Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaGEnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300019788Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300023090Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026281Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028765Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2EnvironmentalOpen in IMG/M
3300028860Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3EnvironmentalOpen in IMG/M
3300028874Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1EnvironmentalOpen in IMG/M
3300028882Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3EnvironmentalOpen in IMG/M
3300029916Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1EnvironmentalOpen in IMG/M
3300029920Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3EnvironmentalOpen in IMG/M
3300029986Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033561Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fractionEnvironmentalOpen in IMG/M
3300033798Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-SEnvironmentalOpen in IMG/M
3300033819Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-MEnvironmentalOpen in IMG/M
3300033827Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9EnvironmentalOpen in IMG/M
3300033887Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1EnvironmentalOpen in IMG/M
3300034065Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070709_1140707313300005434Corn, Switchgrass And Miscanthus RhizosphereMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEMGYVAWLERLPALPSRAHPAGFLDLPPWYERPRVEVTLLLT
Ga0070735_1026871233300005534Surface SoilMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEAGYVAWLERLPALPSLAHPAGFLDLPPW
Ga0068866_1096366713300005718Miscanthus RhizosphereMARSKEPLLNRILRRGEDAGLLVSAAALMMVEMGYVAWLERLPALPSRAHPAGFLDLPPWYERPRVEVTLLLTVLGGMIAWAAWGVFGFMRSRPEETVVP
Ga0066791_1008853613300005949SoilMTRSNEPLLNRILRRGEDAGLLVSVSALMLVEMGYIAWLERLPALPTPAHPAGFIDLPPWYERPRFEVTLLLTVLGGIIAWAAW
Ga0070717_1207576623300006028Corn, Switchgrass And Miscanthus RhizosphereMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEMGYVAWLERLPAFPSRVHPAGFLDLPPWHERPRV
Ga0075017_10112549013300006059WatershedsMARSKEPLLIRMLRRGEDAALLVSAAALMLVEVGYVAWLERLPALPSRAHPAGFLDLPPWHERPRVEVTLLLTVLGG
Ga0075019_1017132813300006086WatershedsMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEAGYVAWLERLPALPSLAHPAGFLDLPPWYERPRVEVTLLLTVLGGMIAWASWGVF
Ga0075030_10086654633300006162WatershedsMTRCNEPLLARILRRGEDVGLLVSVAALMLVEMGYVAWLERLPALPATAHPVGFIDLPPWFERPRFEVTLL
Ga0105242_1202168033300009176Miscanthus RhizosphereMLQRGEDAGLLVSAAALMLVEAGYVAWLERLPALPSRAHPAGFLDLPPWYER
Ga0105237_1248018813300009545Corn RhizosphereVLRRGENIGLLASATALILVETGYVAWLERLPVLPGPSHPEGFLVLPPWYDRPRVEVTLLLTILGGLIASAAWGVFGLIRNSAGESPSTERWT
Ga0116111_115380313300009616PeatlandMARNREALNRILRRGEDACLLVSTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTV
Ga0116133_122910023300009623PeatlandMARSTESLLNRILRRGEDAGLLVSAAALILVEAGYVEWLERLPALPSPAHPAGFLDLPPW
Ga0116102_118604033300009632PeatlandMARNREALNRILRRGEDAGLLVSTAALMLVEVGYVAWLERLPALPSSAH
Ga0116126_121362823300009640PeatlandMARNREALNRILRRGEDAGLLVCTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLGGMIAWASWGVFGFMRSRPEETVAPSHRA
Ga0116110_115659933300009643PeatlandMARSKESLLNRILRRGGDAGLLVSAAALILVEAGYVAWLERLPALPSPAHPVGFL
Ga0105859_129888523300009651Permafrost SoilMTRSNEPLLNRILRRGEDAGLLVSVSALMLVEMGYIAWLERLPALPTPAHPAGFIDLPPW
Ga0116101_119121813300009759PeatlandMARSKESLLNRILRRGEDAGLLVSAVALILVEAGYVAWLERLPALPSPAHPA
Ga0116219_1033104833300009824Peatlands SoilMLRRGEDAALLVSAAALMLVEAGYVEWLERLPALPSRAHPAGFLDLPPWYEHPRVEVTLLLTVLGGMIAWASWGVFGFI
Ga0181533_130175713300014152BogMARNREALNRILRRGEDAGLLVSAAALMLVEVGYVAWLERLPALPSPVHPVGFIDL
Ga0181518_1017403313300014156BogMARSKESLLNRILRRGEDAGLLVSAAALILVEAGYVAWLERLPALPSPAHPAGFLDLPPWYEHPRGEVTLLLTVLGGVIGWAAL
Ga0181521_1006521543300014158BogMANSNEPLLNRTLRQGEDAGLLVSAAALMLVEVGYAAWLERLPDLPNAAHPAGFIDLPPWHEHPRVEVTLLLTILGGIIAWAAWGVFGF
Ga0181517_1045594233300014160BogMARSKESLLNRILRRGGDAGLLVSAAALILVEAGYVAWLERLPALPSPAHPVGFLDLPPW
Ga0181532_1037413213300014164BogMARSKESLLNRILRRGEHAGLLVSAAALILVEAGYVAWLERLPALPSPAHPAGFLDLPPWYEHPRVEVTLLLTVLGGVIAWAALGVCG
Ga0181532_1043270113300014164BogMARNREALNRILRRGEDAGLLVSTAALMLVEVGYVAWLERLPALPSSAHPAGFIDLPPWYERP
Ga0182010_1071880833300014490FenMARNREALNRILQRGEDACLLVSTAALMLVEVGYVAWLERLPALPSPAHPA
Ga0182014_1020632113300014491BogMGRNREDLNRILRRGEDVGLLVSTAALMLVEAGYVAWLERLPALPSPAHPAGFIDLP
Ga0182014_1030806333300014491BogMARSKESLLNRILRRGEDAGLLVSAAALILVEAGYVAWLERLPAFPTPAHPAGFLDLPPWYEHPRVEVTLLLTVLG
Ga0182014_1047906613300014491BogMARNREALNRILRRGEDAGLLVCTAALMLVEVGYVAWLERLPALPSRAHPAGFIDLPPWYERPRVEVTLLLTVLGGLIA
Ga0182013_1023404013300014492BogMARSKESLLNRILRRGEDAGLLVSAAALVLVEAGYVAWLERLPALPSPAHPAGFLDLPPWYEHPR
Ga0182011_1074564413300014496FenMARNREVLNRILRRGEDAGLLLSTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVT
Ga0182011_1098262413300014496FenMARNREALNRILRRGEDAGLLVCTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRV
Ga0182021_1289498413300014502FenMAKHREALNRILRRGEDACLLVSTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLGGLIAW
Ga0181519_1096119623300014658BogMARNREALNRILRRGEDAGLLVCTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLGGLIAWAAWGVLDFMRNRPDATAATTHRAMV
Ga0182027_1084675133300014839FenLGLLVSTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLGGLIAWAAWGVLDFMRNRPEATAATTHRAMVGKR
Ga0182027_1103088413300014839FenMARNREALNRILRRGEDAGLLVSTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLGGLIA
Ga0182027_1188170623300014839FenMARNREALNRILRRGEDAGLLVCTAALMLVEAGYVAWLERLPALPSPAHPAGFIDLPPWYQRPRVEVTLLLTVLGGLIAWAAWGVLDFMR
Ga0187849_129730023300017929PeatlandMAKHREALNRILRRGEDGCLLVSTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEV
Ga0187877_137702113300017931PeatlandMARNREALNRILRRGEDAGLLVSAAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTV
Ga0187879_1037679733300017946PeatlandMANSNEPLLNRTLRQGEDAGLLVSAAALMLVEVGYAAWLERLPDLPNAAHPAGFIDLPPWHEHPRVEVTLLLTILGGIIAWAAWGVFGFMRNRSDATVAP
Ga0187879_1041555313300017946PeatlandMARSKESLLNRILRRGEDAGMLVSAAALILVEAGYVAWLERLPALPSPAHPVGFLDLPPWYEHPRVEVTLLLTVLGGLIA
Ga0187847_1053755813300017948PeatlandMARSKESLLNRILRRGGDAGLLVSAAALILVEAGYVAWLERLPALPSPAHPVGFLDLPPWYEHPRVEVTLLLTVLGGL
Ga0187847_1071571523300017948PeatlandMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEMGYVAWLERLPALPSRA
Ga0181520_1019057513300017988BogMPRSQKPILSRILRQGEDAGLLVSAAALMLVEVGYVAWLERLPALPSPAHPAGFVDLPPWYEHPRVEVTLLLTILGGIIAWAAWGVF
Ga0187861_1027007523300018020PeatlandMARNREALNRILRRREDACLLVSTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLGGLIAWAAWGVFDFIRN
Ga0187885_1043451323300018025PeatlandMARSKESLLNRILRRGEDAGLLVSAAALILVEAGYVAWLERLPALPSPAHPAGFLDLPPWYEHPRVEVTLLLTVLGGVIAWAALG
Ga0187875_1020869613300018035PeatlandMARGKESLLNRILRRGEDAGLLVSAAALILVEAGYVSWLERLPAIPSPAHPAGFLDLPPWYEH
Ga0187887_1086509413300018043PeatlandMTRSKESLLNRILRRGEDAGLLVSTAALMLVEVGYVAWLERLPALPSSAHPAGFIDLPPWYER
Ga0187851_1073650713300018046PeatlandMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEAGYVAWLERLPALPSLAHPA
Ga0187859_1079440213300018047PeatlandMARGKEPLLIRMLRRGEDAGLLVSAAALMLVEVGYVAWLERLPALPSRAHPAGFLD
Ga0187858_1041300313300018057PeatlandMARSKESLLNRILRRGEDAGMLVSAAALILVEAGYVAWLERLPALPSPAHPVGFVDL
Ga0187858_1072704713300018057PeatlandMARNREALNRILRRGEDAGLLVCTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLGGLIAWAAWGVLDF
Ga0182028_147661923300019788FenMARNREALNRILRWGEDACLLVCTAALMLVEAGYVAWLERLPALPSPAHPAGFIDLPPWYERPESK
Ga0210405_1074578413300021171SoilMARSKEPLLIRMLRRGEDASLLVSAAALMLVEMGYVAWLERLPALPSRTHPAGFLDLPPWHERPRVEVTLLLTVLGGMIAWASWGVFRFMRSRPEETVLPSQRA
Ga0210388_1143003813300021181SoilMVRSKESLLNRILRRGEDAGLLVSAAALILVEAGYVAWLERLPALPSPAHPAGFLDLPPWYERPRVEVILLLTVLGGVIAWAALGVCDLMRNRSEGDV
Ga0210389_1095843023300021404SoilMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEMGYVAWLERLPALPSRAHPAGFLDLPPWHERPRVEVTLLLTVLGGMIVWASWGVFGFMRSRPEETVVP
Ga0210391_1073681233300021433SoilMVRSKESLLNRILRRGEDAGLLVSAAALILVEAGYVAWLERLPALPSPTHPAGFLDLPPWYEHPRVEVTLLLTVLGGVIAWAALGVCGLMRNRSDGPVADMRRA
Ga0210402_1136652313300021478SoilMAKSKEPLLIRMLRRGEDIGLLMSAAALMLVEMGYVAWLERLPALPGRAHPAGFLDLPPWYERPRVEVTLLLTVLGGMIAWAAWGVL
Ga0224558_102281943300023090SoilMGRNREDLNRILRRGEDVGLLVSTAALMLVEAGYVAWLERLPALPSPAHPAGFIDLPTWY
Ga0207700_1090452833300025928Corn, Switchgrass And Miscanthus RhizosphereMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEMGYVAWLERLPALPGREHPAGFL
Ga0209863_1002366543300026281Prmafrost SoilMTRSNEPLLNRILRRGEDAGLLVSVSALMLVEMGYVALLERLPALPAPP
Ga0209579_1013206613300027869Surface SoilMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEMGYVAWLERLPALPSRAHPAGFLDLPPWHERPRVEVTLLLTVLGGMIAWASWGVFAFMRSRPEETVVPSHRAM
Ga0209698_1069069713300027911WatershedsMTRCNEPLLARILRRGEDVGLLVSVAALMLVEMGYVAWLERLPALPATAHPVGFIDLPPWFERPRFEVTLLLTV
Ga0302198_1015564833300028765BogMARSNESLLNRILRRGEAAGLLVSAAALMLVEVAYAAWLERLPALPSPAHQAGFIDLPPWYEHPRVEMTLLLTILGGIIAWAAWG
Ga0302199_114563913300028860BogMARSNESLLNRILRRGEAAGLLVSAAALMLVEVAYAAWLERLPALPSPAHQAGFIDLPPWYEHPRVEMTLLLTILGGIIAWA
Ga0302155_1005476513300028874BogMARSNESLLNRILRRGEAAGLLVSAAALMLVEVAYAAWLERLPALPSPAHQAGFIDLPPWYEHPRVEMTLLLTILGGIIAWAAWGVFGFMRNRSDATADP
Ga0302154_1012667713300028882BogMARSNESLLNRILRRGEAAGLLVSAAALMLVEVAYAAWLERLPALPSPAHQAGFIDLPPWYEHPRVEMTLLLTILGGIIAWAAWGVFGFMRNRSDA
Ga0302148_119506213300029916BogMARSNESLLNRILRRGEAAGLLVSAAALMLVEVAYAAWLERLPALPSPAHQAGFIDLPPWYEHPRVEMTLLLTI
Ga0302142_109632733300029920BogMARSNESLLNRILRRGEAAGLLVSAAALMLVEVAYAAWLERLPALPSPAHQAGFIDL
Ga0302188_1001928013300029986BogMARSNESLLNRILRRGEAAGLLVSAAALMLVEVAYAAWLERLPALPSPAHQAGFIDLPPWYEHPRVEMTLLLTILGGIIAWAAWGVFGFMRNRSDATADPTHRAM
Ga0311353_1083301133300030399PalsaMVRIKESLLNRVLRRGEHAGLLVTAAALILVEAGYVAWLERLPALPSPAHPAGFLDLPPW
Ga0311370_1116222613300030503PalsaMARSKESLLNRILRRGEDAGLLVSAAALILVEAGYVAWLERLPTLPSPAHPAG
Ga0311370_1121585233300030503PalsaMVRIKESLLNRVLRRGEDAGLLVTAAALILVEAGYVAWLERLPALPSPAHPAGFLDLPPWYEHPRVEVTLLLTVLGGVIAWAALGVCGLMRNRSDGAVA
Ga0302324_10284524413300031236PalsaMARSKEPLLDPLLRRAEDAGMVLSAAALALVEVGYVAWLERLPAFPSPAHPAEFLDLPLWYEHPRVGVTLLLT
Ga0265316_1033867233300031344RhizosphereMARNREALNRILRRGEDAGLLVSTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLGGLIAWAAWGVLDF
Ga0302320_1093537633300031524BogMARNREALNRILRRGEDAGLLLSTTALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTL
Ga0302320_1097969733300031524BogMTRSKESLLNRILRRGGDAGLLVSAAALVLVEAGYVAWLERLPALPSPAHPAGFLDLPPWYEHPRVEVTLLLTVLGGVIAWAALGVCGLMRNRSGGAV
Ga0310686_11743411513300031708SoilMARSKESLLNRILRRGEDAGLLVSAAALILVEAGYVAWLERLPALPSPTHPAGFLDLPPWYEHPRME
Ga0302319_1120948213300031788BogMVRIKESLLNRILRREEDAGLLVSAAALILVEAGYVAWLERLPALPSPAHPAGFLDLPPWYEHPRVEVTLLLTV
Ga0302322_10356458723300031902FenMARNREALNRILRRGEDACLLVCTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLG
Ga0308175_10091761933300031938SoilMARSKEPLLIRMLRRGEDAGLLVSAAALMLVEMGYVAWLERLPALPGRAHPAGFLDLP
Ga0335079_1172925913300032783SoilMASDLDRLLLRILRRGEHLSLLASAVALIMVEAGYVAWLERLPALPNPAHQPGFLDLPPWYQRPRVEVTFLLTILGGMIFAAACGVAQLMRTRA
Ga0335079_1199824313300032783SoilMARGKEPLLNRILRRGEDAGLLVSAAALMLVEAGYLASLERLPALPSPAHRAGFLDLPPWYEHPRVEVTLMLTVLGGMIAWAAWGVLGFMRNRPDAAVASTHR
Ga0335078_1176970523300032805SoilMVSDLDRLLIRILRRGEHLGLLASAVALIMVEAGYVAWLERLPALPNPAHQPGFLDLPPWYQRPRVEVTFLLT
Ga0335080_1088390413300032828SoilMASDLDRLLIRVLRRGEHLGLLASAVALIMVEAGYVAWLERLPALPNPAHQPGFLDLPPWYQRPRVEVTFLLTILGGMIFSAA
Ga0335080_1179677223300032828SoilMARSKEPLLIRMLRRGEDAVLLVSAAALMLVEMGYVAWLERLPALPSRAHPAGFL
Ga0335080_1185266923300032828SoilMARSKEPLLNRILRRGEDAGLLVSTAALMLVEVGYVAWLERLPALPSPAHRAGFLDLPPWYEHPRVEVTLMLTVLGGMIAWAAWGVLG
Ga0335081_1248515513300032892SoilMARSKEPLLIRMPRRGEDAGLLVSAAALMLVEAGYVAWLERVPALPSLAHPAGFLDLPPWYERPRVEV
Ga0335083_1028568513300032954SoilMPNSETLLNRVLRRGEDIGLLASAVALILAEAGYVAWLERLPAFPNSSRPAGFLDLPPWYERPRVEVTLLLTILGCVIASAAWGVLALVRDGAAGSSAGERRTL
Ga0335084_1163398513300033004SoilMVRGPEAFLNRVLRRGEDIGLLATAAALILIEAGYVAWLERLPVLPGPSHPVGFLVLPPWYDR
Ga0335073_1116491413300033134SoilMERSKESLLNRILRRGEDAGLLVNAAALMLVEVGYVAWLERLPTLPSPAHPAGFLDLPHW
Ga0335077_1088594113300033158SoilMERSKESLLNRILRRGEDAGLLVNAAALMLVEVGYVAWLERLPTLPSRAHPAGFLDLPPWYEHPRVEVTWLLTILGGMIAWAVWGVLSFLRDRPDAA
Ga0326728_1050488113300033402Peat SoilMARSKESLLNRILRRGGDAGLLVSAAALILVEAGYVAWLERLPALPSPAHPVGFLDLPPWYEHPRVEVTLLLTVLGGLIAWAALGV
Ga0326728_1095772013300033402Peat SoilMTRRGESLLNRILRRGEDAGLLMSAVALVLVEAGYVAWLERLPAFPTTAHPAGFIDLPPWYEHPRVEVTLLLTVLGGMIAWASWGV
Ga0326727_1080328233300033405Peat SoilMARNREALNRILRRGEDAGLLVTTAALMLVEVGYVAWLERLPALPSPAHPAGFI
Ga0371490_102570013300033561Peat SoilMARNREALNRILRRGEDAGLLVCTAALMLVEAGYVAWLERLPALPSPAHPAGFID
Ga0334821_049904_687_8333300033798SoilMARNREALNRILRRGEDACLLVSTAALMLVEVGYVAWLERLPALPSPAH
Ga0334816_079435_294_6053300033819SoilMARNREALNRILRRGEDAGLLLCTAALMLVEVGYVAWLERLPALPSPAHPAGFIDLPPWYERPRVEVTLLLTVLGGLIAWAAWGVFDFMRNRPEATVATTRRAM
Ga0334848_097972_374_5173300033827SoilMARNREALNRILRRGEDACLLVSTAALMLVEVGYVAWLERLPALPSPA
Ga0334790_234518_1_2433300033887SoilMARNKESLLNRILRRGADAGVLVSAVALILVEAGYVAWLERLPALPSPAHPAGFLDLPPWYEHPRVEVTLLLTVLGGVIAW
Ga0334827_262864_1_2403300034065SoilMAKDKDKESLLNRILRRGEDAGLLVSAAALILVEAGYLAWLERLPALPNPAHPAGFLDLPPWYEHPRVEVTLLLTVLGGV


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