Metagenome / Metatranscriptome Family F104244

Basic Information
Family ID	F104244
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	62 residues
Representative Sequence	KSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Number of Associated Samples	74
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.00 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (86.000 % of family members)
Environment Ontology (ENVO)	Unclassified (65.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (88.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.10% β-sheet: 0.00% Coil/Unstructured: 33.90%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF00119	ATP-synt_A	98.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	98.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300009701\|Ga0116228_10437652	Not Available	900	Open in IMG/M
3300010188\|Ga0127505_1113458	Not Available	584	Open in IMG/M
3300010200\|Ga0127507_1333746	Not Available	553	Open in IMG/M
3300019258\|Ga0181504_1468740	Not Available	508	Open in IMG/M
3300019270\|Ga0181512_1291982	Not Available	550	Open in IMG/M
3300022498\|Ga0242644_1045020	Not Available	509	Open in IMG/M
3300022523\|Ga0242663_1120563	Not Available	540	Open in IMG/M
3300022527\|Ga0242664_1137819	Not Available	530	Open in IMG/M
3300022528\|Ga0242669_1121728	Not Available	525	Open in IMG/M
3300022709\|Ga0222756_1089067	Not Available	514	Open in IMG/M
3300022713\|Ga0242677_1011084	Not Available	989	Open in IMG/M
3300030525\|Ga0210273_1149254	Not Available	527	Open in IMG/M
3300030526\|Ga0210267_1145857	Not Available	504	Open in IMG/M
3300030526\|Ga0210267_1189976	Not Available	557	Open in IMG/M
3300030528\|Ga0210277_10084841	Not Available	537	Open in IMG/M
3300030528\|Ga0210277_11061200	Not Available	500	Open in IMG/M
3300030535\|Ga0210285_1166889	Not Available	532	Open in IMG/M
3300030536\|Ga0210266_1261674	Not Available	538	Open in IMG/M
3300030539\|Ga0210281_1023734	Not Available	669	Open in IMG/M
3300030542\|Ga0210249_1084664	Not Available	554	Open in IMG/M
3300030542\|Ga0210249_1159770	Not Available	577	Open in IMG/M
3300030543\|Ga0210289_1003227	Not Available	539	Open in IMG/M
3300030548\|Ga0210252_10785196	Not Available	538	Open in IMG/M
3300030549\|Ga0210257_10148502	Not Available	531	Open in IMG/M
3300030550\|Ga0247631_1124215	Not Available	581	Open in IMG/M
3300030564\|Ga0210256_10133539	Not Available	585	Open in IMG/M
3300030569\|Ga0247628_1279848	Not Available	502	Open in IMG/M
3300030573\|Ga0210272_1166288	Not Available	622	Open in IMG/M
3300030573\|Ga0210272_1231684	Not Available	563	Open in IMG/M
3300030573\|Ga0210272_1277850	Not Available	531	Open in IMG/M
3300030575\|Ga0210288_1246458	Not Available	520	Open in IMG/M
3300030575\|Ga0210288_1271007	Not Available	502	Open in IMG/M
3300030577\|Ga0210260_10301268	Not Available	567	Open in IMG/M
3300030577\|Ga0210260_10326107	Not Available	550	Open in IMG/M
3300030577\|Ga0210260_10386162	Not Available	514	Open in IMG/M
3300030578\|Ga0210275_10269633	Not Available	581	Open in IMG/M
3300030578\|Ga0210275_10272209	Not Available	579	Open in IMG/M
3300030578\|Ga0210275_10275983	Not Available	576	Open in IMG/M
3300030578\|Ga0210275_10288623	Not Available	567	Open in IMG/M
3300030578\|Ga0210275_10290306	Not Available	566	Open in IMG/M
3300030578\|Ga0210275_10293613	Not Available	564	Open in IMG/M
3300030586\|Ga0265393_1227854	Not Available	504	Open in IMG/M
3300030591\|Ga0247626_1216626	Not Available	553	Open in IMG/M
3300030598\|Ga0210287_1193415	Not Available	556	Open in IMG/M
3300030598\|Ga0210287_1220994	Not Available	530	Open in IMG/M
3300030602\|Ga0210254_10318995	Not Available	683	Open in IMG/M
3300030604\|Ga0247637_1154520	Not Available	566	Open in IMG/M
3300030608\|Ga0247651_10265957	Not Available	556	Open in IMG/M
3300030622\|Ga0265391_10315086	Not Available	525	Open in IMG/M
3300030623\|Ga0265392_1223854	Not Available	532	Open in IMG/M
3300030624\|Ga0210251_10669854	Not Available	549	Open in IMG/M
3300030625\|Ga0210259_10089327	Not Available	542	Open in IMG/M
3300030625\|Ga0210259_10937076	Not Available	546	Open in IMG/M
3300030625\|Ga0210259_12064605	Not Available	552	Open in IMG/M
3300030626\|Ga0210291_11244788	Not Available	568	Open in IMG/M
3300030626\|Ga0210291_11670350	Not Available	630	Open in IMG/M
3300030627\|Ga0210269_10344326	Not Available	530	Open in IMG/M
3300030628\|Ga0247629_10352167	Not Available	551	Open in IMG/M
3300030633\|Ga0247623_10263043	Not Available	553	Open in IMG/M
3300030738\|Ga0265462_12159090	Not Available	547	Open in IMG/M
3300030740\|Ga0265460_12655159	Not Available	536	Open in IMG/M
3300030755\|Ga0074023_1594048	Not Available	572	Open in IMG/M
3300030758\|Ga0138305_1112184	Not Available	526	Open in IMG/M
3300030778\|Ga0075398_10909129	Not Available	515	Open in IMG/M
3300030800\|Ga0074032_11058906	Not Available	507	Open in IMG/M
3300030841\|Ga0075384_11397874	Not Available	730	Open in IMG/M
3300030842\|Ga0075404_11403227	Not Available	517	Open in IMG/M
3300030843\|Ga0075392_10902736	Not Available	610	Open in IMG/M
3300030843\|Ga0075392_10939338	Not Available	511	Open in IMG/M
3300030843\|Ga0075392_11132052	Not Available	527	Open in IMG/M
3300030848\|Ga0075388_11687891	Not Available	609	Open in IMG/M
3300030850\|Ga0075387_11550715	Not Available	594	Open in IMG/M
3300030851\|Ga0075380_11252336	Not Available	561	Open in IMG/M
3300030851\|Ga0075380_11592390	Not Available	547	Open in IMG/M
3300030854\|Ga0075385_11481348	Not Available	652	Open in IMG/M
3300030855\|Ga0075374_10056838	Not Available	513	Open in IMG/M
3300030934\|Ga0075391_10726408	Not Available	534	Open in IMG/M
3300030935\|Ga0075401_11793180	Not Available	548	Open in IMG/M
3300030947\|Ga0075390_10735584	Not Available	552	Open in IMG/M
3300030947\|Ga0075390_10998312	Not Available	552	Open in IMG/M
3300030949\|Ga0074031_1640799	Not Available	565	Open in IMG/M
3300030949\|Ga0074031_1680549	Not Available	510	Open in IMG/M
3300030949\|Ga0074031_1766474	Not Available	533	Open in IMG/M
3300030969\|Ga0075394_10758154	Not Available	528	Open in IMG/M
3300030970\|Ga0075381_11133200	Not Available	508	Open in IMG/M
3300030974\|Ga0075371_10022227	Not Available	537	Open in IMG/M
3300030974\|Ga0075371_11519117	Not Available	533	Open in IMG/M
3300030980\|Ga0074027_10924352	Not Available	520	Open in IMG/M
3300031022\|Ga0138301_1063522	Not Available	611	Open in IMG/M
3300031035\|Ga0074026_10523089	Not Available	508	Open in IMG/M
3300031051\|Ga0074029_1626918	Not Available	506	Open in IMG/M
3300031057\|Ga0170834_113716179	Not Available	557	Open in IMG/M
3300031128\|Ga0170823_10671529	Not Available	553	Open in IMG/M
3300031128\|Ga0170823_17168554	Not Available	516	Open in IMG/M
3300031231\|Ga0170824_125473011	Not Available	573	Open in IMG/M
3300031469\|Ga0170819_12269758	Not Available	548	Open in IMG/M
3300031474\|Ga0170818_103862278	Not Available	744	Open in IMG/M
3300032515\|Ga0348332_10386530	Not Available	538	Open in IMG/M
3300032756\|Ga0315742_10822430	Not Available	880	Open in IMG/M
3300032756\|Ga0315742_13139794	Not Available	533	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.00%
Host-Associated	Host-Associated	3.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.00%
Plants	Host-Associated → Plants	3.00%
Aquatic	Environmental → Aquatic	2.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.00%
Peat Moss	Host-Associated → Plants → Peat Moss	3.00%
Freshwater	Environmental → Aquatic → Freshwater	2.00%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.00%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	3.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.00%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	94.00%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	3.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.00%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	86.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.00%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	3.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.00%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010188	Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MT (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010200	Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MT (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030525	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO037SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030526	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030535	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO749-VDE026SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030536	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE043SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030539	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO151-VCO111SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030542	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR003SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030543	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE107SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030548	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR016SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030549	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030550	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb8 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030564	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR020S0 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030569	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030573	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO036SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030575	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE050SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030577	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO131-ARE010SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030586	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE041SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030591	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030598	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030602	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR018SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030604	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030608	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030622	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030623	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE043SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030624	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR005SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030625	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO122-ANR120SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030627	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE095SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030628	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb6 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030633	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030755	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030758	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_OS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030778	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030800	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral N1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030841	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030843	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030850	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030851	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030854	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030934	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030947	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030949	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus C3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030970	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030980	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus N2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031035	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus N1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031051	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus C1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116228_104376521	3300009701	Host-Associated	TKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSSLRV*
Ga0127505_11134581	3300010188	Host-Associated	EFETKSTLFLSFILLYTVTLIFSLESFKSGSLRGDALNGFKLIFALALFNIVGLTGRFTPITV*
Ga0127507_13337461	3300010200	Host-Associated	KSTLFLSFVLLYTVTLMFSLESFKSGSLSGDALNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSSLRV*
Ga0181504_14687402	3300019258	Peatland	FETKSTLFLSFILLYTVTLMFSLESFKSSSLSGDALNGFKLIFALALFNIVGLTGRFTPITV
Ga0181512_12919822	3300019270	Peatland	EFETKSTLFLSFILLYVVTLIFSLESFKASSLGGDTLNGFKFIFALALFNIVGLTGRFTPITVWPFFVLLSSLSV
Ga0242644_10450202	3300022498	Soil	LLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0242663_11205632	3300022523	Soil	FETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0242664_11378192	3300022527	Soil	ETKSTLFLSFILLYTVTLMFSLESFKSGSLGGDTLNGFKLIFALALFNIVGLTGRFTPIT
Ga0242669_11217282	3300022528	Soil	ETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPIT
Ga0222756_10890671	3300022709	Soil	KSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0242677_10110842	3300022713	Soil	LSFILLYTVTLIFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210273_11492541	3300030525	Soil	LEFETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210267_11458572	3300030526	Soil	LLYTVTLIFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210267_11899762	3300030526	Soil	LLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210277_100848412	3300030528	Soil	LFLSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0210277_110612001	3300030528	Soil	LEFETKSTLFLSFILLYTVTLIFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210285_11668892	3300030535	Soil	CFLSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0210266_12616742	3300030536	Soil	LLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSILRV
Ga0210281_10237342	3300030539	Soil	MFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0210249_10846642	3300030542	Soil	LLEFETKSTLFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0210249_11597701	3300030542	Soil	LLEFETKSTLFLSFILLYTVTLMFSLESFKAGILSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0210289_10032272	3300030543	Soil	LFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210252_107851961	3300030548	Soil	ALLEFETKSTLFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0210257_101485021	3300030549	Soil	ILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0247631_11242151	3300030550	Soil	LLEFETKSTLFLSFVLLYVVTLMFSLESFKSRSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0210256_101335392	3300030564	Soil	QALLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0247628_12798482	3300030569	Soil	VLLYVVTLMFSLESFKSRSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0210272_11662881	3300030573	Soil	VINIIALLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210272_12316842	3300030573	Soil	ALLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0210272_12778502	3300030573	Soil	LFLSFILLYTVTLIFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210288_12464582	3300030575	Soil	FILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210288_12710072	3300030575	Soil	LYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0210260_103012682	3300030577	Soil	ALLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210260_103261072	3300030577	Soil	EFETKSTLFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0210260_103861621	3300030577	Soil	AYIIALLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210275_102696331	3300030578	Soil	NIIALLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210275_102722092	3300030578	Soil	RTTQALLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0210275_102759831	3300030578	Soil	LLEFETKSTLFLSFILLYTVTSIFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210275_102886232	3300030578	Soil	LFLNLKQKVHCFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210275_102903061	3300030578	Soil	IIALLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210275_102936132	3300030578	Soil	ALLEFETKSTLFLSFILLYTVTLMFSLESFKSGSLSGDALNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSSLRVWVRVMFQ
Ga0265393_12278542	3300030586	Soil	YTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0247626_12166262	3300030591	Soil	LEFETKSTLFLSFVLLYVVTLMFSLESFKSRSLGGDTLNGFKFIFALAFFNIVGLTGRFTPITV
Ga0210287_11934152	3300030598	Soil	LEFETKSTLFLSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0210287_12209942	3300030598	Soil	FLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0210254_103189951	3300030602	Soil	NRTTQALLEFETKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0247637_11545202	3300030604	Soil	ALLEFETKSTLFLSFVLLYVVTLMFSLESFKSRSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0247651_102659572	3300030608	Soil	TKSTLFLSFVLLYVVTLMFSLESFKSRSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0265391_103150862	3300030622	Soil	FLSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0265392_12238542	3300030623	Soil	LSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0210251_106698542	3300030624	Soil	LLEFETKSTLFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITVWPFFVLLSSLRVWVRVMFQ
Ga0210259_100893272	3300030625	Soil	LFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITVWPFFVLLSSLRVWVRVMFQ
Ga0210259_109370762	3300030625	Soil	ETKSTLFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPIT
Ga0210259_120646051	3300030625	Soil	SFILLYTVTLMFSLESFKSGSLSGDALNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSSLRVWVRVMFQ
Ga0210291_112447882	3300030626	Soil	LLEFETKSTLFLSFALLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0210291_116703501	3300030626	Soil	ALLEFETKSTLFLSFVLLYTVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0210269_103443262	3300030627	Soil	LFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0247629_103521672	3300030628	Soil	EFETKSTLFLSFVLLYVVTLMFSLESFKSRSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0247623_102630432	3300030633	Soil	LEFETKSTLFLSFVLLYVVTLMFSLESFKSRSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0265462_121590902	3300030738	Soil	FFLFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0265460_126551591	3300030740	Soil	LIFSLLLFNYFKELEFETKSTLFLSFILLYTVTLMFSLESFKAGSLSGDTLNGFKLIFALALFNIVGLTGRFTPITVWPFFVLLSRLRV
Ga0074023_15940482	3300030755	Soil	IIFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0138305_11121841	3300030758	Soil	TLFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075398_109091292	3300030778	Soil	FLSFVLLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGSFTPITV
Ga0074032_110589061	3300030800	Soil	LYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0075384_113978742	3300030841	Soil	FALLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075404_114032272	3300030842	Soil	FLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075392_109027362	3300030843	Soil	LLEFETKSTLFLSFILLYTVTLMFSLESFKAGRLSGDALNGFKLIFALALFNIVGLTGRFTPITV
Ga0075392_109393382	3300030843	Soil	ALLYVVTLIFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075392_111320522	3300030843	Soil	LSFALLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075388_116878911	3300030848	Soil	LFLSFVLLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075387_115507151	3300030850	Soil	NIIALLEFETKSTLFLSFILLYTVTLMFSLESFKAGRLSGDALNGFKLIFALALFNIVGLTGRFTPITV
Ga0075380_112523361	3300030851	Soil	KNIIALLEFETKSTLFLSFILLYTVTLMFSLESFKAGRLSGDALNGFKLIFALALFNIVGLTGRFTPITV
Ga0075380_115923901	3300030851	Soil	EFETKSTLFLSFALLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075385_114813482	3300030854	Soil	LLEFETKSTLFLSFALLYVVTLIFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075374_100568382	3300030855	Soil	LLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075391_107264082	3300030934	Soil	FLSFILLYVVTLMFSLESFKSNSLGGDTLNGFKFIFALALFNIVGLTGSFTPITV
Ga0075401_117931802	3300030935	Soil	LFLSFALLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075390_107355842	3300030947	Soil	ALLEFETKSTLFLSFVLLYVVTLMFSLESFKASSLGGDTLNGFKFIFALALFNIVGLTGRFTPITVWPFFVLLSSLRV
Ga0075390_109983122	3300030947	Soil	LEFETKSTLFLSFALLYVVTLIFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0074031_16407992	3300030949	Soil	LSFILLYTVTLMFSLESFKSGSLSGDALNGFKLIFALALFNIVGLTGRFTPITV
Ga0074031_16805491	3300030949	Soil	FILLYTVTLIFSLESFKSGSLSGDALNGFKLIFALALFNIVGLTGRFTPITV
Ga0074031_17664742	3300030949	Soil	TLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0075394_107581542	3300030969	Soil	LSFILLYVVTLMFSLESFKSNSLGGDTLNGFKFIFALALFNIVGLTGSFTPITV
Ga0075381_111332002	3300030970	Soil	FILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075371_100222272	3300030974	Soil	STLFLSFVLLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0075371_115191172	3300030974	Soil	FISFILLYVVTLMFSLESFKSRSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0074027_109243521	3300030980	Soil	LSFILLYTVTLIFSLESFKSGSLSGDALNGFKLIFALALFNIVGLTGRFTPITV
Ga0138301_10635221	3300031022	Soil	LFLSFILLYTVTLMFSLESFKAGRLSGDALNGFKLIFALALFNIVGLTGRFTPITV
Ga0074026_105230892	3300031035	Soil	KDKRTKSTLFLSFILLYTVTLMFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0074029_16269182	3300031051	Soil	LLYVVTLTFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0170834_1137161792	3300031057	Forest Soil	FETKSTLFLSFVLLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0170823_106715292	3300031128	Forest Soil	FLSFALLYVVTLIFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0170823_171685542	3300031128	Forest Soil	LYVVTLMFSLESFKSNSLGGDTLNGFKFIFALALFNIVGLTGSFTPITV
Ga0170824_1254730111	3300031231	Forest Soil	IIALLEFETKSTLFLSFILLYVVTLMFSLESFKSNSLGGDTLNGFKFIFALALFNIVGLTGSFTPITV
Ga0170819_122697582	3300031469	Forest Soil	LEFETKSTLFLSFVLLYVVTLMFSLESFKSSSLGGDTLNGFKFIFALALFNIVGLTGSFTPITV
Ga0170818_1038622781	3300031474	Forest Soil	LLEFETKSTLFLSFILLYMVTLMFSLESFKPSSLGGDTLNGFKFIFALALFNIVGLTGRFTPITVWPFFVLLSSLRV
Ga0348332_103865301	3300032515	Plant Litter	LEFETKSTLFLSFILLYVVTLMFSLESFKSNQLSGDTLNGFKFIFALALFNIVGLTGRFTPITV
Ga0315742_108224302	3300032756	Forest Soil	MFSLESFKAGSLGGDTLNGFKLIFALALFNIVGLTGRFTPITV
Ga0315742_131397942	3300032756	Forest Soil	TLFLSFILLYTVTLIFSLESFKSGSLSGDALNGFKLIFALALFNIVGLTGRFTPITV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104244

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences