Metagenome Family F104231

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F104231
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	57 residues
Representative Sequence	MGRQRVFDQLTLIQLKQPALQLRAKERSLLVQLVQSLLLEIVFNRTTDTSDEESDNE
Number of Associated Samples	68
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.00 %
% of genes near scaffold ends (potentially truncated)	21.00 %
% of genes from short scaffolds (< 2000 bps)	85.00 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (63.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.000 % of family members)
Environment Ontology (ENVO)	Unclassified (42.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.94% β-sheet: 0.00% Coil/Unstructured: 47.06%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF00239	Resolvase	40.00
PF13408	Zn_ribbon_recom	16.00
PF07508	Recombinase	3.00
PF01548	DEDD_Tnp_IS110	2.00
PF02371	Transposase_20	2.00
PF01425	Amidase	2.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	43.00
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	40.00
COG3547	Transposase	Mobilome: prophages, transposons [X]	4.00
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	2.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.00 %
Unclassified	root	N/A	37.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.00 %
Unclassified	root	N/A	37.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.00 %
Unclassified	root	N/A	37.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.00 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	3.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.00 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	3.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.00 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101887385	Not Available	2369	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1005446	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10119259	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300004267\|Ga0066396_10000714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2639	Open in IMG/M
3300004268\|Ga0066398_10041398	Not Available	894	Open in IMG/M
3300004633\|Ga0066395_10050525	Not Available	1838	Open in IMG/M
3300005332\|Ga0066388_103301273	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005332\|Ga0066388_105852265	Not Available	622	Open in IMG/M
3300005332\|Ga0066388_108819176	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005764\|Ga0066903_100315767	Not Available	2489	Open in IMG/M
3300005764\|Ga0066903_105707484	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005764\|Ga0066903_105901569	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005764\|Ga0066903_108554051	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005764\|Ga0066903_108831126	Not Available	511	Open in IMG/M
3300009792\|Ga0126374_11156489	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300009826\|Ga0123355_11161663	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300010043\|Ga0126380_10674275	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300010046\|Ga0126384_11158888	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300010046\|Ga0126384_11538212	Not Available	624	Open in IMG/M
3300010048\|Ga0126373_10310861	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300010048\|Ga0126373_11377784	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300010048\|Ga0126373_11604398	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300010048\|Ga0126373_13102696	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300010360\|Ga0126372_10254091	Not Available	1510	Open in IMG/M
3300010360\|Ga0126372_12047687	Not Available	620	Open in IMG/M
3300010362\|Ga0126377_11353372	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300010376\|Ga0126381_100756279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1393	Open in IMG/M
3300010376\|Ga0126381_102552627	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300010376\|Ga0126381_103495081	Not Available	617	Open in IMG/M
3300010376\|Ga0126381_104577078	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012971\|Ga0126369_12808891	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012971\|Ga0126369_12957269	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300016294\|Ga0182041_10090085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2221	Open in IMG/M
3300016294\|Ga0182041_10949834	Not Available	775	Open in IMG/M
3300016319\|Ga0182033_10348691	Not Available	1237	Open in IMG/M
3300016341\|Ga0182035_10077825	Not Available	2358	Open in IMG/M
3300016357\|Ga0182032_10411587	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300016357\|Ga0182032_11101237	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300016404\|Ga0182037_11043852	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300016422\|Ga0182039_10767113	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300016422\|Ga0182039_11337238	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300016422\|Ga0182039_11465630	Not Available	621	Open in IMG/M
3300016445\|Ga0182038_10028498	All Organisms → cellular organisms → Bacteria	3477	Open in IMG/M
3300017822\|Ga0187802_10235897	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300017959\|Ga0187779_11287176	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300017961\|Ga0187778_11229654	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300017970\|Ga0187783_10259649	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300017972\|Ga0187781_10036814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3372	Open in IMG/M
3300017974\|Ga0187777_10204967	Not Available	1330	Open in IMG/M
3300017975\|Ga0187782_10269456	Not Available	1282	Open in IMG/M
3300017993\|Ga0187823_10012318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2056	Open in IMG/M
3300017994\|Ga0187822_10112516	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300017999\|Ga0187767_10258530	Not Available	576	Open in IMG/M
3300018058\|Ga0187766_10520880	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300018058\|Ga0187766_10701923	Not Available	699	Open in IMG/M
3300018058\|Ga0187766_10949704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	609	Open in IMG/M
3300018085\|Ga0187772_10592008	Not Available	788	Open in IMG/M
3300018085\|Ga0187772_11151792	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300018086\|Ga0187769_10072385	All Organisms → cellular organisms → Bacteria	2433	Open in IMG/M
3300021168\|Ga0210406_11005319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300021560\|Ga0126371_10110975	Not Available	2750	Open in IMG/M
3300021560\|Ga0126371_10256823	Not Available	1863	Open in IMG/M
3300021560\|Ga0126371_11116370	Not Available	927	Open in IMG/M
3300021560\|Ga0126371_11720560	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300021560\|Ga0126371_12008185	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300021560\|Ga0126371_12149915	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300021560\|Ga0126371_12165443	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300021560\|Ga0126371_12252966	Not Available	658	Open in IMG/M
3300021560\|Ga0126371_13775818	Not Available	511	Open in IMG/M
3300021953\|Ga0213880_10021649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1430	Open in IMG/M
3300027874\|Ga0209465_10293032	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300027904\|Ga0209737_10124969	Not Available	2543	Open in IMG/M
3300031543\|Ga0318516_10054276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2188	Open in IMG/M
3300031545\|Ga0318541_10082923	Not Available	1698	Open in IMG/M
3300031545\|Ga0318541_10657214	Not Available	586	Open in IMG/M
3300031546\|Ga0318538_10440193	Not Available	706	Open in IMG/M
3300031561\|Ga0318528_10677217	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031564\|Ga0318573_10307559	Not Available	849	Open in IMG/M
3300031681\|Ga0318572_10885809	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031719\|Ga0306917_10511518	Not Available	943	Open in IMG/M
3300031724\|Ga0318500_10098204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1328	Open in IMG/M
3300031724\|Ga0318500_10707660	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031736\|Ga0318501_10410189	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300031763\|Ga0318537_10250104	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300031765\|Ga0318554_10224915	Not Available	1069	Open in IMG/M
3300031770\|Ga0318521_10505980	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300031780\|Ga0318508_1188042	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031795\|Ga0318557_10479056	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031796\|Ga0318576_10279117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	789	Open in IMG/M
3300031797\|Ga0318550_10355636	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300031890\|Ga0306925_10919103	Not Available	898	Open in IMG/M
3300031893\|Ga0318536_10175061	Not Available	1092	Open in IMG/M
3300031910\|Ga0306923_11933424	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031954\|Ga0306926_12194558	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031959\|Ga0318530_10055934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1496	Open in IMG/M
3300031981\|Ga0318531_10025764	Not Available	2382	Open in IMG/M
3300032039\|Ga0318559_10023421	Not Available	2393	Open in IMG/M
3300032089\|Ga0318525_10721011	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300032174\|Ga0307470_11465661	Not Available	566	Open in IMG/M
3300032261\|Ga0306920_100752852	Not Available	1433	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.00%
Host-Associated	Host-Associated	2.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.00%
Aquatic	Environmental → Aquatic	3.00%
Arthropoda	Host-Associated → Arthropoda	2.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.00%
Freshwater	Environmental → Aquatic → Freshwater	3.00%
Digestive System	Host-Associated → Arthropoda → Digestive System	2.00%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.00%
Loam	Environmental → Terrestrial → Soil → Loam	12.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.00%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	2.00%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.00%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	2.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.00%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	26.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	13.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.00%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.00%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.00%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018873852	3300000364	Soil	MGQQRVIDQLTLIQLNQPAHQLRAKERSLLVQLVQSLLLEIAFNRTTDTSGEESDNE*
AF_2010_repII_A01DRAFT_10054462	3300000580	Forest Soil	MGRQRVFNQLTLIQLKQPAFQLRAKERSLLVQLVQSLLLEIVFNRTTDTSDEESDNE*
AF_2010_repII_A1DRAFT_101192591	3300000597	Forest Soil	EGAMRQRRVFGQLPVIQLNEPVLQLRAKERSALVQLVQGLLLEIVLSETRDTSGEESDNE
Ga0066396_100007141	3300004267	Tropical Forest Soil	MKQRGVFDHLTLTQLNQPVLQLRAKERSALVHLVQSLLLEIVLNESTDTSGEESDNE*
Ga0066398_100413981	3300004268	Tropical Forest Soil	MGRQRVFDQLTLIKLKQPALQLQAKERSLLVQLVQSLLLEIVFNRTTDTADEESDNE*
Ga0066395_100505252	3300004633	Tropical Forest Soil	MGQPRVFDQLTLIQLNQPAVQLRAKERSLLVQLVQSLLLEIMFNRTADTSGEESDNE*
Ga0066388_1033012731	3300005332	Tropical Forest Soil	MRQRRVFGQLPVIQLNEPVLQLRAKERSALVQLVQGLLLEIVLSETRDTSGEESDNE*
Ga0066388_1058522651	3300005332	Tropical Forest Soil	MGQHRVFDQLTLMQLEQPAVQLRAKERSLLVQLVQRLLLEIALNRTAGTSGKES
Ga0066388_1088191761	3300005332	Tropical Forest Soil	MGRQRVFDQLTLIQLKQPAFQLRAKERRLLVQLVQSLLLEIVFNRTTDTSDEESENE*
Ga0066903_1003157672	3300005764	Tropical Forest Soil	MGRQRIFDQLTLIQLKQPALQLRAKERSLLVQLVQSLLSEIVFNRTTDTSDEESDNE*
Ga0066903_1057074843	3300005764	Tropical Forest Soil	MGRQYVFDQLTLIQLKQPALQLRVMERSLLVQLVRSLLLEIAFNGATDTSGEESDNE*
Ga0066903_1059015691	3300005764	Tropical Forest Soil	MGRQRIFDQLTLIQLKQPAFQLRAKERSLLVQLMQSLLLEIVFNRTTDTSEEESDNE*
Ga0066903_1085540512	3300005764	Tropical Forest Soil	MGRQLVFDQPTLIQLKQPAFQLRAKERSLLVQLVQSLLLEIVFNRTTDTSDEESENE*
Ga0066903_1088311261	3300005764	Tropical Forest Soil	MGRQRVFDQLTLIQLKQPAFQLRAKERSLLVQLVQSLLLEIVFNRTTDTFDEESDNE*
Ga0126374_111564891	3300009792	Tropical Forest Soil	MGRQRVFDQLTLIQLKQPAFQLRAKERSLLVQLVQSLLSEIVFNRTTDTSDEESDNE*
Ga0123355_111616632	3300009826	Termite Gut	MGRQRVFDQLTLIQLKQPAFQLRAKERSLLVQLVQSLLLEIVFNRTTDTSDEESDNE*
Ga0126380_106742752	3300010043	Tropical Forest Soil	MGRQRIFDQLTLIQLKQPALQLRAKERSLLVQLVQSLLLEIVFNRTTDASDEESDNE*
Ga0126384_111588881	3300010046	Tropical Forest Soil	MGRQLVFDQPTLIQLKQPAFQLRAKERSLLVQLVQSLLLEIVFNRTTDTSDEECDNE*
Ga0126384_115382122	3300010046	Tropical Forest Soil	MGRQRVFDQLTLIQLKQPALQLRVKERSLLVQLVRSLLLEIAFNGATDTSGEESDNE*
Ga0126373_103108612	3300010048	Tropical Forest Soil	MGRRRGFNQLPLIQLGQPALRLPPKERSLLVQLVQRLLLEIVLNRTMDRSAEESGNE*
Ga0126373_113777842	3300010048	Tropical Forest Soil	MGQHRVFDQLTLMQLKQPAVQLRAKERSLLVQLVQRLLLEIALNRTVGTSGKESDNE*
Ga0126373_116043982	3300010048	Tropical Forest Soil	MGRQYVFDQLTLIQLKQPALQLRVKERSLLVQLVRSLLLEIAFNGATDTSGEESDNE*
Ga0126373_131026962	3300010048	Tropical Forest Soil	MGRQRIFDQLTLIQLKQPAFQLRAKERSLLVQLVQSLLLEIVFNRTTGRVRRGERQ*
Ga0126372_102540911	3300010360	Tropical Forest Soil	RPAEGAMGRQRVFDQLTLIKLKQPALQLQAKERSLLVQLVQRLLLEIVFNRTTDTADEESDNE*
Ga0126372_120476871	3300010360	Tropical Forest Soil	MGRQRLFDQLTLIQLKQPALQLQAKERSLLVQLVRSLLLEIVFNRTMDTSDEESDNE*
Ga0126377_113533721	3300010362	Tropical Forest Soil	MGRQYVFDQLTLIQLKQPALQLRVKERSLLVQLVRSLLLEIAFNGATDTPGEESDNE*
Ga0126381_1007562794	3300010376	Tropical Forest Soil	MGRRRGFNQLPLIQLRQPALRLPPKERSLLVQLVQRLLLEIVLNRTTDRSAEESGNE*
Ga0126381_1025526272	3300010376	Tropical Forest Soil	MGRQRVFDQLTLIQLKQPAFQLSAKERSLLVQLVQSLLLEIVFNRTTDTSDEECDNE*
Ga0126381_1034950812	3300010376	Tropical Forest Soil	MGRQRVFDQLTLIQLKQPAVQLRAKERSLLVQLVQSLLLEIVFKRTTDMSDEESDNE*
Ga0126381_1045770782	3300010376	Tropical Forest Soil	MGRQRVFDQLTLIKLKQPALQLQAKERSLLVQSVQSLLLEIVFNRTTDTADEESDNE*
Ga0126369_128088913	3300012971	Tropical Forest Soil	MGRRRGFNQLPLIQLRQPALRLPPKERSLLVQLLQSLLLEVAFNRTTDTSGEESDNE*
Ga0126369_129572691	3300012971	Tropical Forest Soil	MGQPRVFDQLTLIQLKQPAVQLRAKERSLLVQLVQSLFLEIVFNRTADTSGEESDNE
Ga0182041_100900852	3300016294	Soil	MKQRGVFDHLTLTQLNLPVLQLRAKERSALVHLVQSLLLEIVLNESTDTSGEESDNE
Ga0182041_109498342	3300016294	Soil	MRQRRVFGQLPVIQPNEPVLQLRAKERSALVQLVQGLLLEIVLSETRDTSGEESDNE
Ga0182033_103486912	3300016319	Soil	MGQHRVFDQLTLMQLKQPAVQLRAKERSLLVQLVQRLLLEIALNRTVGSSGKESDNE
Ga0182035_100778251	3300016341	Soil	MRRRRVFDQLTLNQLNEPVLQLRAKERSALVQLVQSLLLEIVLSETRDTSGEESDNE
Ga0182032_104115871	3300016357	Soil	MRQRRVFDQLTLNQLNEPVLQLRAKERSALVQLVQSLLLEIVLKETTDTSEEESDNE
Ga0182032_111012371	3300016357	Soil	MGRQRVFDQLTLIRLKQPAFQLRGKERSLLVQLVQSLLLEVVFNRDTSDEESENE
Ga0182037_110438522	3300016404	Soil	MGRQRVFNQLALIQLKQPAFQLRAKERRLLVKWVQSLLLEIVFNRTTDTSDEESDNE
Ga0182039_107671132	3300016422	Soil	MRRRRVFDQQTLNQMNYPVLQLRAKERSALVQLVQSLLLEIDLTEPSATSDEESDNA
Ga0182039_113372382	3300016422	Soil	MGQQRVFDHLTLIQLKKPTLQLRAKEQSLLVQLVQSLLSGIVFNRTTDTSSEESDNE
Ga0182039_114656301	3300016422	Soil	MRQRRVFDQLTLNQLNEPVLQLRAKERSALVQLVQSLLLEIVLKETTDTS
Ga0182038_100284982	3300016445	Soil	MKQRGVFDHLTLTQLNQPVLQLRAKERSALVQLVQGLLLEIVLNESRDTSGEESDNE
Ga0187802_102358972	3300017822	Freshwater Sediment	MRQRRVFDQLPVIQLNEPVLQLRAKERSALVQLVQSLLLEIVLNESKDTSGEESDNE
Ga0187779_112871761	3300017959	Tropical Peatland	MGRQRIFDQLTMIQLKQPALQLRAKERSLLVQLVQSLLSEIVFNRITDTSDEESDNE
Ga0187778_112296542	3300017961	Tropical Peatland	MRQRRVFDQPTLIQLNGPVLQLRAKERSALVQLVQSLLMEIVRNETTDTSGEESDNE
Ga0187783_102596491	3300017970	Tropical Peatland	MRQRRVFDQLTLNQLNEPVLQLRAKERSALVQLVQSLLLEVVLKETTDTSDEESDNE
Ga0187781_100368142	3300017972	Tropical Peatland	MRQRRVFDQLTLNQLNEPVLQLRAKERSALVQLVQSLLLEIVLKETTDTSDKESDNE
Ga0187777_102049671	3300017974	Tropical Peatland	MKHRRVFDQLTVIQLNQPVLQLRAKERSALVQLVQSLLLEIVLKETTDTSDEERDNE
Ga0187782_102694561	3300017975	Tropical Peatland	AEGAMRQRRVFDQLTLNQLNEPVLQLRAKERSALVQLVQSLLLEVVLKETTDTSDEESDN
Ga0187823_100123182	3300017993	Freshwater Sediment	MGQHRVFGQLTLMQLKQPAVQLRAKERSLLVQLVQRLLLEIALNRTVGTSGKESDNE
Ga0187822_101125162	3300017994	Freshwater Sediment	MKQRGVFDQLALIQLNQPVLQLRAKERSALAQLMQSLLLEIVLNESKDTSGEESDNE
Ga0187767_102585301	3300017999	Tropical Peatland	MRQRRVFDQLTLNQLNEPVLQLRAKERSALVQLVQSLLLEIVLKETTDTSDEESDNE
Ga0187766_105208802	3300018058	Tropical Peatland	MRQRRVFDQLTLIQLNEPVLQLRAKERSALVHLVQSLLLEIVRNETTDTSGEESDNE
Ga0187766_107019232	3300018058	Tropical Peatland	YRLTNRSAEGAMRQRRVFDQLTLIQLNEPVLQLRAKERSALVQLVQSLLLEIVRNETTDTSGEESDNE
Ga0187766_109497041	3300018058	Tropical Peatland	MKHRRVFDQLTVIQLNQPVLQLRAKERSALVQLVQSLLLEIVLNETTGTSGGESDNE
Ga0187772_105920082	3300018085	Tropical Peatland	MGRQRLFDQLTLIQLKQPALQLQAKERSHLVQLVQSLLLEIVFNRTTDTSDEESDNE
Ga0187772_111517922	3300018085	Tropical Peatland	MGRQRVFDQLTLIQLKQPALQLRVKERSLLVQLVQSLLLEIALHTTTDTSCEESDNE
Ga0187769_100723854	3300018086	Tropical Peatland	MRQRRVFDQLTLIQLNEPVLQLRAKERSALVQLVQSLLLEIVRNETTDMSGEESDNE
Ga0210406_110053192	3300021168	Soil	MGQQRVIDQLTLIQLNQPAQQLRAKERSLLVQLVKSLLLEIAFNRTTDTSGEESDNE
Ga0126371_101109751	3300021560	Tropical Forest Soil	MGRQYVFDQLTLIQLKQPALQLRVKERSLLVQLVRSLLLEIAFNGATDTSGEESDNE
Ga0126371_102568232	3300021560	Tropical Forest Soil	MKQRGVFDHLTLTQLNQPVLQLRAKERSALVQLVQSLLLEIVLNESTDTSGEESDNE
Ga0126371_111163703	3300021560	Tropical Forest Soil	MGRRRGFNQLPLIQLRQPALRLPPKERSLLVQLVQRLLLEIVLNRTTDRSAEESGNE
Ga0126371_117205602	3300021560	Tropical Forest Soil	MGRQRVFDQLTLIKLKQPALQLQAKERSLLVQLVQSLLLEIVFNRTTDTADEESDNE
Ga0126371_120081851	3300021560	Tropical Forest Soil	VFDQLTLMQLKQPAVQLRAKERSLLVQLVQRLLLEIALNRIAGTSGKESDNE
Ga0126371_121499152	3300021560	Tropical Forest Soil	MRQRRVFGQLPVIQLNEPVLQLRAKERSALVQLVQGLLLEIVLSETRDTSGEESDNE
Ga0126371_121654432	3300021560	Tropical Forest Soil	MGRQRVFDQLTLIKLKQPALQLRPNERSLLVQLVQSLLLEIVFNRTTDTSDEESENE
Ga0126371_122529662	3300021560	Tropical Forest Soil	MGRQRVFDQLTLIQLKQPAFQLRAKERSLLVQLVQSLLLEIVFNRTTDTSDEESDNE
Ga0126371_137758181	3300021560	Tropical Forest Soil	MGRQLVFDQPTLIQLKQPAFQLRAKERSLLVQLVQSLLLEIVFNRTTDTSDEECDNE
Ga0213880_100216492	3300021953	Exposed Rock	MGRQRIFDQLALIQLKQPAFQLRAKERSLLVQLVQSLLLEIVFNRTTEASDEESDTE
Ga0209465_102930322	3300027874	Tropical Forest Soil	MGQPRVFDQLTLIQLNQPAVQLRAKERSLLVQLVQSLLLEIMFNRTADTSGEESDNE
Ga0209737_101249691	3300027904	Termite Gut	MGRQCVFDQLTLIQLKQPTFQLRAKERSLLVQLVQSLLLEIVFNRTAETSDEESDNE
Ga0318516_100542762	3300031543	Soil	MGQHRVFDQLTLMQLKQPAVQLRAKERSLLVQLVQRLLLEIALNRTVGTSGKESDNE
Ga0318541_100829232	3300031545	Soil	MGRQRVFDQLTLIQLKQPALRLRAKERSLLVQLVKSLLLEIVFNRTTDTSDEESDNE
Ga0318541_106572142	3300031545	Soil	MRQRRVFGQLPVIQLNEPVLQLRAKERSALVQLVQSLLLEIVLSETRDTSGEESDNE
Ga0318538_104401932	3300031546	Soil	LTLNQLNEPVLQLRAKERSALVQLVQSLLLEIVLKETTDTSEEESDNE
Ga0318528_106772172	3300031561	Soil	QLTLMQLKQPAVQLRAKERSLLVQLVQRLLLEIALNRTVGTSGKESDNE
Ga0318573_103075591	3300031564	Soil	EEAMGQHRVFDQLTLMQLKQPAVQLRAKERSLLVQLVQRLLLEIALNRTVGTSGKESDNE
Ga0318572_108858092	3300031681	Soil	VFDQLTLNQLNEPVLQLRAKERSALVQLVQSLLLEIVLKETTDTSDEESDNE
Ga0306917_105115182	3300031719	Soil	HLTNRLAEGAMGRQRIFDQLTLIQLKQPAFQLRAKERRLLVQLVQSLLLEIVFNRTTDTSDEESDNE
Ga0318500_100982042	3300031724	Soil	MGRQRVFDQLTLIQLKQPALQLRAKERSLLVQLVQSLLLEIVFNRTTDTSDEESDNE
Ga0318500_107076602	3300031724	Soil	MRRRRVFDQLTLNQLNEPVLQLRAKERSALVQLVQSLLLEIVLKETTDTSDEESDNE
Ga0318501_104101892	3300031736	Soil	MRQRRVFDQLTLNQLNEPVLQLRAKERSALVHLVQSLLLEIVLKETTDTSDEESDNE
Ga0318537_102501042	3300031763	Soil	GQHRVFDQLTLMQLKQPAVQLRAKERSLLVQLVQRLLLEIALNRTVGTSGKESDNE
Ga0318554_102249151	3300031765	Soil	MRQRRVFDQLTLNQLNEPVLQLRAKERSALVHLVQSLLLEIVLNESTDTSGEESDNE
Ga0318521_105059802	3300031770	Soil	MGRQRIFDQLTLIQLKQPALQLRAKERSLLVQLVQSLLSEIVFNRITDTSDEESDNE
Ga0318508_11880421	3300031780	Soil	MRQRRVFDQLTLNQLNEPVLQLRAKERSALVQLVQGLLLEIVLSEIRDTSGEESDNE
Ga0318557_104790561	3300031795	Soil	MRQRRVFSQLPVIQPNEPVLQLRAKERSALVQLVQSLLLEIVLKETTDTSDEESDN
Ga0318576_102791172	3300031796	Soil	MKQRGVFDHLTLTQLNQPVLQLRAKERSALVQLVQSLLLEIVLKETTDTSDEESDNE
Ga0318550_103556361	3300031797	Soil	MGRQRVFDQLTLIQLKQPALQLRAKERSLLVQLVQSLLSEIVFNRTTDTSDEESDNE
Ga0306925_109191031	3300031890	Soil	AYGLTNRSAEGAMKQRGVFDHLTLTQLNQPVLQLRAKERSALVHLVQSLLLEIVLKETTDTSDEESDNE
Ga0318536_101750612	3300031893	Soil	AEGAMGRQRVFDQLTLIQLKQPALRLRAKERSLLVQLVKSLLLEIVFNRTTDTSDEESDN
Ga0306923_119334241	3300031910	Soil	MGRQRVFDQLTLIRLKQPAFQLHAKERSLLVQLVQRLLLEIVFNRTTDASDEESDNE
Ga0306926_121945581	3300031954	Soil	MKQRGVFDQLPVIQLNEPVLQLRAKERSALVQLVQGLLLEIVLSETRDTSGEESDNE
Ga0318530_100559341	3300031959	Soil	PAEGAMGRQRVFDQLTLIQLKQPALQLRAKERSLLVQLVQSLLSEIVFNRTTDTSDEESDNE
Ga0318531_100257643	3300031981	Soil	SDESASGGSYGRQRVFDQLTLIQLKQPALRLRAKERSLLVQLVKSLLLEIVFNRTTDTSDEESDNE
Ga0318559_100234212	3300032039	Soil	PAEGAMGRQRVFDQLTLIQLKQPALRLRAKERSLLVQLVKSLLLEIVFNRTTDTSDEESDNE
Ga0318525_107210112	3300032089	Soil	AYHLTNRPAEEAMGRQRIFDQLTLIQLKQPALQLRAKERSLLVQLVQSLLSEIVFNRTTDTSDEESDNE
Ga0307470_114656611	3300032174	Hardwood Forest Soil	MGQQRVIDQLTLIQLNQPAHQLRAKERSLLVQLVQSLLLEIAFNRTTDTSGEESDNE
Ga0306920_1007528522	3300032261	Soil	MGRQRVFNQLALIQLKQPAFQLRAKERSLLVKWVQSLLLEIVFNRTTDTSDEESDNE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104231

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences