Metagenome Family F103981

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103981
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	75 residues
Representative Sequence	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS
Number of Associated Samples	89
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.46 %
% of genes near scaffold ends (potentially truncated)	34.65 %
% of genes from short scaffolds (< 2000 bps)	79.21 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.010 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.911 % of family members)
Environment Ontology (ENVO)	Unclassified (24.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.26% β-sheet: 11.84% Coil/Unstructured: 57.89%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01544	CorA	24.75
PF00067	p450	18.81
PF04909	Amidohydro_2	6.93
PF00106	adh_short	2.97
PF00334	NDK	1.98
PF01613	Flavin_Reduct	1.98
PF04364	DNA_pol3_chi	1.98
PF14714	KH_dom-like	0.99
PF00551	Formyl_trans_N	0.99
PF00027	cNMP_binding	0.99
PF01556	DnaJ_C	0.99
PF00308	Bac_DnaA	0.99
PF02151	UVR	0.99
PF09839	DUF2066	0.99
PF01527	HTH_Tnp_1	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	24.75
COG2124	Cytochrome P450	Defense mechanisms [V]	18.81
COG0105	Nucleoside diphosphate kinase	Nucleotide transport and metabolism [F]	1.98
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	1.98
COG2927	DNA polymerase III, chi subunit	Replication, recombination and repair [L]	1.98
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.99
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	76.24 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	65.35 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	39.60 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	10.89 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.98 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	39.60 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	6.93 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2.97 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	1.98 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	1.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	39.60 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6.93 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	1.98 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	1.98 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	0.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %
Unclassified	root	N/A	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16518931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3336	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig20765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	611	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100863049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	3623	Open in IMG/M
3300000878\|AL9A1W_1084438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	7339	Open in IMG/M
3300000955\|JGI1027J12803_107848439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	519	Open in IMG/M
3300000956\|JGI10216J12902_106963828	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300001213\|JGIcombinedJ13530_102306864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	550	Open in IMG/M
3300002070\|JGI24750J21931_1031054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	784	Open in IMG/M
3300004114\|Ga0062593_101169399	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300004114\|Ga0062593_102641245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	571	Open in IMG/M
3300004479\|Ga0062595_101980148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	562	Open in IMG/M
3300005093\|Ga0062594_101869006	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005206\|Ga0068995_10045916	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005293\|Ga0065715_10904198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	573	Open in IMG/M
3300005332\|Ga0066388_106571782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	586	Open in IMG/M
3300005332\|Ga0066388_107344114	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005332\|Ga0066388_107844555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	534	Open in IMG/M
3300005434\|Ga0070709_10154340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1590	Open in IMG/M
3300005435\|Ga0070714_100307738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1479	Open in IMG/M
3300005435\|Ga0070714_101082337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	781	Open in IMG/M
3300005439\|Ga0070711_100900649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	755	Open in IMG/M
3300005445\|Ga0070708_100792365	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005459\|Ga0068867_100005429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	9021	Open in IMG/M
3300005468\|Ga0070707_100601669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1062	Open in IMG/M
3300005529\|Ga0070741_10054967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4745	Open in IMG/M
3300005529\|Ga0070741_10288586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1545	Open in IMG/M
3300005547\|Ga0070693_100001003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12592	Open in IMG/M
3300005614\|Ga0068856_101165664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	787	Open in IMG/M
3300005713\|Ga0066905_100060853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2373	Open in IMG/M
3300005764\|Ga0066903_100805052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1681	Open in IMG/M
3300005764\|Ga0066903_100821863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1666	Open in IMG/M
3300005764\|Ga0066903_104548582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	739	Open in IMG/M
3300005937\|Ga0081455_10009973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	9711	Open in IMG/M
3300006163\|Ga0070715_10076920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1505	Open in IMG/M
3300006755\|Ga0079222_10065691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1761	Open in IMG/M
3300006806\|Ga0079220_10009691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3684	Open in IMG/M
3300006845\|Ga0075421_101828604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	652	Open in IMG/M
3300006852\|Ga0075433_11532090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	576	Open in IMG/M
3300006853\|Ga0075420_100516514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1032	Open in IMG/M
3300006954\|Ga0079219_10003837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4347	Open in IMG/M
3300006954\|Ga0079219_12465673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	505	Open in IMG/M
3300009036\|Ga0105244_10271082	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300009147\|Ga0114129_10451900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1685	Open in IMG/M
3300009156\|Ga0111538_12379496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	665	Open in IMG/M
3300010043\|Ga0126380_11201975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	653	Open in IMG/M
3300010046\|Ga0126384_11113379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	724	Open in IMG/M
3300010398\|Ga0126383_11944520	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300012003\|Ga0120163_1115637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	579	Open in IMG/M
3300012010\|Ga0120118_1051108	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300012883\|Ga0157281_1032190	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300012892\|Ga0157294_10004293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2145	Open in IMG/M
3300012905\|Ga0157296_10038343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1063	Open in IMG/M
3300012908\|Ga0157286_10000069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	9375	Open in IMG/M
3300012913\|Ga0157298_10003278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2248	Open in IMG/M
3300012914\|Ga0157297_10429319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	537	Open in IMG/M
3300012931\|Ga0153915_10011891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8356	Open in IMG/M
3300012931\|Ga0153915_10257275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1936	Open in IMG/M
3300012971\|Ga0126369_10140327	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300012987\|Ga0164307_10968327	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300013296\|Ga0157374_10003313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13530	Open in IMG/M
3300013296\|Ga0157374_10799615	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300013758\|Ga0120147_1011211	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300013772\|Ga0120158_10173528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1160	Open in IMG/M
3300014308\|Ga0075354_1006076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1618	Open in IMG/M
3300014321\|Ga0075353_1054229	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300015371\|Ga0132258_11887101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1504	Open in IMG/M
3300015372\|Ga0132256_103620852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	519	Open in IMG/M
3300015373\|Ga0132257_100021083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6875	Open in IMG/M
3300015374\|Ga0132255_100748203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1454	Open in IMG/M
3300015374\|Ga0132255_103055091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	714	Open in IMG/M
3300016404\|Ga0182037_10137412	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300017936\|Ga0187821_10195161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	777	Open in IMG/M
3300017966\|Ga0187776_11613651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	502	Open in IMG/M
3300017974\|Ga0187777_10340409	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300018032\|Ga0187788_10013360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2552	Open in IMG/M
3300019356\|Ga0173481_10000989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6587	Open in IMG/M
3300021560\|Ga0126371_10246644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1899	Open in IMG/M
3300021560\|Ga0126371_11679852	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300022737\|Ga0247747_1016049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	795	Open in IMG/M
3300022892\|Ga0247753_1009673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	982	Open in IMG/M
3300023066\|Ga0247793_1009968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1305	Open in IMG/M
3300023102\|Ga0247754_1025569	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300025915\|Ga0207693_10056561	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300025922\|Ga0207646_10590990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	997	Open in IMG/M
3300025929\|Ga0207664_10229747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1612	Open in IMG/M
3300025931\|Ga0207644_11846766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	505	Open in IMG/M
3300026035\|Ga0207703_11484291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	652	Open in IMG/M
3300026048\|Ga0208915_1015901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	664	Open in IMG/M
3300026054\|Ga0208659_1005219	Not Available	864	Open in IMG/M
3300027587\|Ga0209220_1172872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	554	Open in IMG/M
3300027775\|Ga0209177_10486742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	512	Open in IMG/M
3300031170\|Ga0307498_10036294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1251	Open in IMG/M
3300031545\|Ga0318541_10262608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	960	Open in IMG/M
3300031562\|Ga0310886_10603269	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300031713\|Ga0318496_10796047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	521	Open in IMG/M
3300031833\|Ga0310917_10483376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	843	Open in IMG/M
3300031847\|Ga0310907_10176066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1004	Open in IMG/M
3300031912\|Ga0306921_10699143	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300032035\|Ga0310911_10743342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	568	Open in IMG/M
3300032122\|Ga0310895_10000957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	7264	Open in IMG/M
3300032163\|Ga0315281_10992997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	852	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.20%
Host-Associated	Host-Associated	19.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.26%
Plants	Host-Associated → Plants	19.80%
Aquatic	Environmental → Aquatic	5.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.90%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Marine	Environmental → Aquatic → Marine	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.51%
Loam	Environmental → Terrestrial → Soil → Loam	18.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.97%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Lake	Environmental → Aquatic → Freshwater → Lake	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.99%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.99%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.95%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.96%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.97%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.99%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026048	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026054	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03119440	2088090014	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS
A5_c1_01389420	2124908044	Soil	MSDVADIDVQVLRDCDLVVTRPDTGEQATYRKDGMSPVLVLTDSMRDDPDPARVRFLVSTWKAAHAKAQEFGWLTS
INPhiseqgaiiFebDRAFT_1008630496	3300000364	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKIAYAKAQQLGWLRS*
AL9A1W_10844384	3300000878	Permafrost	MSDVADVNVQVLRDCDLVVTRPDTGEQAIYRKDGMSPILVLTDSMRDDPDPARVRFLVSAWKAAHAKAQELGWLTS*
JGI1027J12803_1078484392	3300000955	Soil	VLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
JGI10216J12902_1069638282	3300000956	Soil	MTDVADVNVQVLQNRDLVVTRLETGEQATYRKEGASPVLVLVDSMRGDPDRERARFLVAAWRAAHAKAQQLGWLRS*
JGIcombinedJ13530_1023068642	3300001213	Wetland	MDDVAGLSVQVSQECDLVVTEPATGEQVVYRRDGNSPILVLMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS*
JGI24750J21931_10310541	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	SDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0062593_1011693991	3300004114	Soil	MSDLADVNAQVLQNRDLVVTRPETGERDKDGASPLRVLMDSMRDDPDPERVRFLVSAWKAAYAKAQQLVVEVLTSAPA
Ga0062593_1026412451	3300004114	Soil	MSDLADIEVQVLQDRDLVVTRPATGEQVTYRKDGASRMLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0062595_1019801481	3300004479	Soil	MSDVAGLNVQVSHDRDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRFLVSAWKA
Ga0062594_1018690062	3300005093	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0068995_100459161	3300005206	Natural And Restored Wetlands	LAMSDVAGLNVQVLQDCDLVVTEPGTGEKVVYRKDGDSPVLVMMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0065715_109041982	3300005293	Miscanthus Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLG
Ga0066388_1065717821	3300005332	Tropical Forest Soil	MSDVAGLNVQVLQDCDLVVTEPRTGEKVVYRKDGNSPVLVMMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0066388_1073441141	3300005332	Tropical Forest Soil	DRDLVVTRPATGEQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0066388_1078445551	3300005332	Tropical Forest Soil	MSDVAGLSVQVLQDWDLVVTEPRTGEKVVYRKDRDSPVLVMLDSLRADPDAGRVRFLVSAWKAAHAKAQQLGWLKS*
Ga0070709_101543401	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LNVQVSHDRDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0070714_1003077382	3300005435	Agricultural Soil	MSDVAGLNVQVSHDRDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0070714_1010823372	3300005435	Agricultural Soil	MSDLADIDVQVLQDRDLVVTRPATGDQVTYRKDGASRMLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0070711_1009006492	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVAGLNVQVSHDRDLVVTEPRTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0070708_1007923652	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGW
Ga0068867_1000054295	3300005459	Miscanthus Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKVQQLGWLRS*
Ga0070707_1006016692	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RGAAMSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0070741_100549673	3300005529	Surface Soil	MSDVAGLNVQVLQDQDLVVTEPRTGEKVVYRRDGNSPLLVLMDSLRADPDAARVKFLVSAWKAAHAKAQQLGWLKS*
Ga0070741_102885861	3300005529	Surface Soil	MSDVTGLNVQVLQDQDLVVTEPKTGEKVVYRRDGNSPLLVLMDSLRADPDAARVKFLVSAWKAAHAKAQQLGWLKS*
Ga0070693_1000010031	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAK
Ga0068856_1011656641	3300005614	Corn Rhizosphere	MSDVAGLNVQVSHDRDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRYLVSAWKAAHAKAQQLGWLKS*
Ga0066905_1000608532	3300005713	Tropical Forest Soil	MSDLADIDVQVLQDRDLVVTRPATGEQVTYRKDGASRMLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0066903_1008050524	3300005764	Tropical Forest Soil	MSDLADIDVQVLQDRDLVVTRPDTGEQVTYRKDSTSPMLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0066903_1008218631	3300005764	Tropical Forest Soil	DRDLVVTRSATGEQVTYRKDGVSPVLVLMDSMRMDPEPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0066903_1045485822	3300005764	Tropical Forest Soil	MSDLADIEVQVLRDRDLVVTRPATGEQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0081455_100099733	3300005937	Tabebuia Heterophylla Rhizosphere	MSDLADVNVQVVQNSHLVVTRPDTGEQATYRKDGASPLLVLMDSMREDPDPERVQFLVSAWKAAHAKAQALGWLKS*
Ga0070715_100769204	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLVDIDVQVLQDRDLVVTRPATGDQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS
Ga0079222_100656911	3300006755	Agricultural Soil	MSDLADINVQVLQNRDLVVTRAETGEQATYRKDVASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLEWLRS*
Ga0079220_100096912	3300006806	Agricultural Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYTKAQQLGWLRS*
Ga0075421_1018286041	3300006845	Populus Rhizosphere	INVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0075433_115320902	3300006852	Populus Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRDDPDPERVRFLVSAWKAAYAKAQQLGW
Ga0075420_1005165142	3300006853	Populus Rhizosphere	MSDIADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0079219_100038376	3300006954	Agricultural Soil	MSDLADINVQVLQNRDLVVTRAETGEQATYRKDVASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0079219_124656732	3300006954	Agricultural Soil	GAMSDVAGLNVQVSHDRDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0105244_102710821	3300009036	Miscanthus Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWK
Ga0114129_104519003	3300009147	Populus Rhizosphere	MSDLADNNVQVLQNPDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0111538_123794962	3300009156	Populus Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRDDPDPERVRFLVSAWKAAYAKAQQLGWMRS*
Ga0126380_112019751	3300010043	Tropical Forest Soil	MSDFADIDVQVLQDRDLVVTRPATGEQVTYRKDGASRMLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0126384_111133792	3300010046	Tropical Forest Soil	MSDFADIDVQVLQDHDLVVTRPATGEQVTYRKDGASRMLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0126383_119445201	3300010398	Tropical Forest Soil	VLLIGSVAMSDLADIDVQVLQDRDLVVTRPDTGEQVTYRKDSTSPMLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0120163_11156372	3300012003	Permafrost	MSDVADVNVQVLRDCYLVVTRPDTGEQAIYRKDGMSPVLVLTDSMRDDPDPARVRFLVSAWKAAHAKAQELGWLTS*
Ga0120118_10511083	3300012010	Permafrost	GAETVPKLTLQLDHSMGADQSDVADVNVQVLRDCDLVVTRPDTGEQAIYRKDGMSPILVLTDSMRDDPDPARVRFLVSAWKAAHAKAQELGWLTS*
Ga0157281_10321902	3300012883	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYA
Ga0157294_100042932	3300012892	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKIAYAKAQQLGWMRS*
Ga0157296_100383432	3300012905	Soil	MSDLAGINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDSERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0157286_100000697	3300012908	Soil	MSDLADINVQILQNRDLVVTRPETGEQATYLKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0157298_100032783	3300012913	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMASMRNDPDPERVRFLVSAWKAAYAKAQQL
Ga0157297_104293191	3300012914	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRDDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0153915_100118919	3300012931	Freshwater Wetlands	MSDVAGLNVQVLQDCDLVVTEPRTGEKVVYRKDGDSPVLVMMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0153915_102572752	3300012931	Freshwater Wetlands	MSDVASLNVQVSQDWDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0126369_101403272	3300012971	Tropical Forest Soil	MSDLADIEVQVLRDRDLVVTRPTTGEQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0164307_109683272	3300012987	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKVQQLGWL
Ga0157374_100033132	3300013296	Miscanthus Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPMLVLMDSMRDDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0157374_107996151	3300013296	Miscanthus Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLPVLMDSMRNDPDPERVRFLVSAWKIAYAKAQQLG
Ga0120147_10112112	3300013758	Permafrost	MGADQSDVADVNVQVLRDCDLVVTRPDTGEQAIYRKDGMSPILVLTDSMRDDPDPARVRFLVSAWKAAHAKAQELGWLTS*
Ga0120158_101735282	3300013772	Permafrost	MSDVADIDVQVLRDCDLVVTRPDTGEQVTYRKDGMSPVLVLTDSMRDDPDPARVRFLVSTWKAAHAKAQEFGWLTS*
Ga0075354_10060762	3300014308	Natural And Restored Wetlands	MSDVAGLNVQVLQDCDLVVTEPGTGEKVVYRKDGDSPVLVMMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0075353_10542293	3300014321	Natural And Restored Wetlands	LTRGVLNCPNQVEGLAMSDVAGLNVQVLQDCDLVVTEPGTGEKVVYRKDGDSPVLVMMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0132258_118871012	3300015371	Arabidopsis Rhizosphere	MSDVASLNVQVSHDRDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRFLVSAWKAAHAKAQQLGWLKS*
Ga0132256_1036208522	3300015372	Arabidopsis Rhizosphere	LADIDVQVLQDRDLVVTRPATGEQVTYRKDGASRMLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS*
Ga0132257_1000210835	3300015373	Arabidopsis Rhizosphere	MSDLADINVQVLQNRDLVVTRPDTGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS*
Ga0132255_1007482034	3300015374	Arabidopsis Rhizosphere	MSDVAGLNVQVSHDRDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRFLVSAWKAAHAKAQQLGWL
Ga0132255_1030550911	3300015374	Arabidopsis Rhizosphere	MSDFADIDVQVLQDRDLVVTRPATGEQVTYRKDGASRMLVLMDSMRMDPDPERARFLVSAWRAAH
Ga0182037_101374122	3300016404	Soil	VILPKSTCRVLQDRDLVVTRPATGEQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS
Ga0187821_101951611	3300017936	Freshwater Sediment	MSDVAGLNVQVSHDRDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRFLVSAWKAAHAKAQQLGWLKS
Ga0187776_116136512	3300017966	Tropical Peatland	MGDLTDFTVQVLKGRDLVVTKPKTGEQAVYRREGNSPLLVLADSMRIDPDPARARFLVSAWKAAHARAQQLGWLRS
Ga0187777_103404091	3300017974	Tropical Peatland	MTSEVLKDCDPVVTQSQTGEQAIYRRDSNSPMLVLADSTRIDPGPARVRFLISAWKALHATVLQLGWLRS
Ga0187788_100133602	3300018032	Tropical Peatland	MSDVASLNVQVSHDRDLVVTEPGTGEQVIYRKDGDSPVLVMMDSLRADPNAARVRFLVSAWKAAHAKAQQLGWLKS
Ga0173481_100009894	3300019356	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKIAYAKAQQLGWLRS
Ga0126371_102466443	3300021560	Tropical Forest Soil	MSDLLADIDVQVLQDRDLVVTRSATGEQVTYRKDGVSPVLVLMDSMRMDPEPERARFLVSAWRAAHAKAQQLGWLSS
Ga0126371_116798521	3300021560	Tropical Forest Soil	MSDLADIDVQVLQDRDLVVTRPDTGEQVTYRKDSTSPMLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGW
Ga0247747_10160491	3300022737	Soil	AMSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKIAYAKAQQLGWLRS
Ga0247753_10096731	3300022892	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWMRS
Ga0247793_10099681	3300023066	Soil	MSDLADNNVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS
Ga0247754_10255691	3300023102	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWL
Ga0207693_100565611	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLADIEVQVLQDRDLVVTRPATGEQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS
Ga0207646_105909902	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS
Ga0207664_102297471	3300025929	Agricultural Soil	DINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS
Ga0207644_118467661	3300025931	Switchgrass Rhizosphere	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRDDPDPERVRFLVSAWKAAYAKAQQLGWMRS
Ga0207703_114842912	3300026035	Switchgrass Rhizosphere	ADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS
Ga0208915_10159012	3300026048	Natural And Restored Wetlands	CPNQVEGLAMSDVAGLNVQVLQDCDLVVTEPGTGEKVVYRKDGDSPVLVMMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS
Ga0208659_10052191	3300026054	Natural And Restored Wetlands	FPQLERRILPKNDALKASQLTRGVLNCPNQVEGLAMSDVAGLNVQVLQDCDLVVTEPGTGEKVVYRKDGDSPVLVMMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS
Ga0209220_11728722	3300027587	Forest Soil	MSDVADVNVQVLRDCDLVVTRPDTGEQAIYRKDGMSPVLVLTDSMRDDPDPARVRFLVSAWKAAHAKAQELGWLTS
Ga0209177_104867421	3300027775	Agricultural Soil	MSDLADINVQVLQNRDLVVTRAETGEQATYRKDVASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS
Ga0307498_100362945	3300031170	Soil	MSDVAGLNVQVLQDCDLVVTEPRTGEKVVYRKDGDSPVLVMMDSLRADPDAARVRFLVSAWKAAHAKAQQLGWLKS
Ga0318541_102626082	3300031545	Soil	MSDLAEIDVQVLQDRDLVVTRPATDEQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS
Ga0310886_106032692	3300031562	Soil	MSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRDDPDPERVRFLVSAWKAAYAKAQQLGWLRS
Ga0318496_107960471	3300031713	Soil	MSDLAEIDVQVLQDRDLVVTRPATGEQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKA
Ga0310917_104833762	3300031833	Soil	MSDLAEIDVQVLQDRDLVVTRPGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS
Ga0310907_101760661	3300031847	Soil	GAAMSDLADINVQVLQNRDLVVTRPETGEQATYRKDGASPLLVLMDSMRNDPDPERVRFLVSAWKAAYAKAQQLGWLRS
Ga0306921_106991432	3300031912	Soil	SDLAEIDVQVLQDRDLVVTRPATGEQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS
Ga0310911_107433421	3300032035	Soil	MSDLAEIDVQVLQDRDLVVTRPATGEQVTYRKDGASPVLVLMDSMRMDPDPERARFLVSAWRAAHAKAQQLGWLSS
Ga0310895_100009577	3300032122	Soil	MSDLADINVQVLQNRDLVTRPETGEQATYRKDGASPLLVLMDSMRDDPDPERVRFLVSAWKAAYAKAQQLGWLRS
Ga0315281_109929972	3300032163	Sediment	MSDAADVNVQVLRDCDLVVTRPDTGEQATYRKDGMSPVLVLTDSMRDDPTPARVRFLVSAWKAAHAKAQELGWLTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103981

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences