NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103963

Metagenome / Metatranscriptome Family F103963

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103963
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 101 residues
Representative Sequence VWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPEQPSATD
Number of Associated Samples 88
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 2.97 %
% of genes near scaffold ends (potentially truncated) 46.53 %
% of genes from short scaffolds (< 2000 bps) 82.18 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (64.356 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(20.792 % of family members)
Environment Ontology (ENVO) Unclassified
(37.624 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.376 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 61.46%    β-sheet: 0.00%    Coil/Unstructured: 38.54%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00106adh_short 46.53
PF00465Fe-ADH 33.66
PF00487FA_desaturase 2.97
PF00210Ferritin 2.97
PF00730HhH-GPD 0.99
PF03473MOSC 0.99
PF00448SRP54 0.99
PF03476MOSC_N 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG03373-dehydroquinate synthetaseAmino acid transport and metabolism [E] 33.66
COG0371Glycerol dehydrogenase or related enzyme, iron-containing ADH familyEnergy production and conversion [C] 33.66
COG1454Alcohol dehydrogenase, class IVEnergy production and conversion [C] 33.66
COG1979Alcohol dehydrogenase YqhD, Fe-dependent ADH familyEnergy production and conversion [C] 33.66
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 2.97
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 2.97
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 0.99
COG0177Endonuclease IIIReplication, recombination and repair [L] 0.99
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 0.99
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 0.99
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 0.99
COG3217N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domainDefense mechanisms [V] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A64.36 %
All OrganismsrootAll Organisms35.64 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001305|C688J14111_10291353Not Available516Open in IMG/M
3300001686|C688J18823_10017297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei4812Open in IMG/M
3300001686|C688J18823_10070814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2419Open in IMG/M
3300002568|C688J35102_119057036Not Available632Open in IMG/M
3300004081|Ga0063454_100305214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria999Open in IMG/M
3300004081|Ga0063454_101132257Not Available642Open in IMG/M
3300004156|Ga0062589_100040192All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2505Open in IMG/M
3300004480|Ga0062592_100404595Not Available1087Open in IMG/M
3300005104|Ga0066818_1024945Not Available517Open in IMG/M
3300005163|Ga0066823_10012606Not Available1218Open in IMG/M
3300005327|Ga0070658_10299833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1370Open in IMG/M
3300005330|Ga0070690_101040769Not Available647Open in IMG/M
3300005331|Ga0070670_100776071Not Available864Open in IMG/M
3300005332|Ga0066388_102162447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → Caldilineales → Caldilineaceae1003Open in IMG/M
3300005340|Ga0070689_101460791Not Available619Open in IMG/M
3300005343|Ga0070687_100148471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1373Open in IMG/M
3300005354|Ga0070675_101157025Not Available712Open in IMG/M
3300005354|Ga0070675_101993539Not Available535Open in IMG/M
3300005406|Ga0070703_10066411Not Available1193Open in IMG/M
3300005434|Ga0070709_10640960Not Available822Open in IMG/M
3300005435|Ga0070714_100326367All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1436Open in IMG/M
3300005436|Ga0070713_100328741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1413Open in IMG/M
3300005437|Ga0070710_10739420Not Available698Open in IMG/M
3300005439|Ga0070711_100054352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2763Open in IMG/M
3300005439|Ga0070711_101600303Not Available570Open in IMG/M
3300005444|Ga0070694_100968422Not Available705Open in IMG/M
3300005456|Ga0070678_100592661All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria989Open in IMG/M
3300005539|Ga0068853_101018086Not Available798Open in IMG/M
3300005546|Ga0070696_100890296Not Available738Open in IMG/M
3300005616|Ga0068852_100055598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3417Open in IMG/M
3300005843|Ga0068860_100755022Not Available984Open in IMG/M
3300006028|Ga0070717_10046345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3557Open in IMG/M
3300006032|Ga0066696_10219348Not Available1220Open in IMG/M
3300006163|Ga0070715_10379835Not Available780Open in IMG/M
3300006175|Ga0070712_100298296Not Available1303Open in IMG/M
3300006175|Ga0070712_100570155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria955Open in IMG/M
3300006175|Ga0070712_101606101Not Available569Open in IMG/M
3300006575|Ga0074053_11131243Not Available512Open in IMG/M
3300006603|Ga0074064_11791669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3004Open in IMG/M
3300006755|Ga0079222_10001433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales6795Open in IMG/M
3300009093|Ga0105240_10675435Not Available1130Open in IMG/M
3300009098|Ga0105245_10337565Not Available1489Open in IMG/M
3300009098|Ga0105245_10350644All Organisms → cellular organisms → Bacteria → Terrabacteria group1462Open in IMG/M
3300009551|Ga0105238_10041696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4649Open in IMG/M
3300010044|Ga0126310_11725148Not Available521Open in IMG/M
3300010371|Ga0134125_10061339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4185Open in IMG/M
3300010373|Ga0134128_11722928Not Available689Open in IMG/M
3300010373|Ga0134128_12354594Not Available587Open in IMG/M
3300010375|Ga0105239_11524556Not Available772Open in IMG/M
3300010396|Ga0134126_12171086Not Available606Open in IMG/M
3300010401|Ga0134121_11349026Not Available721Open in IMG/M
3300011107|Ga0151490_1491693Not Available1893Open in IMG/M
3300012951|Ga0164300_10279921All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300012958|Ga0164299_11086915Not Available596Open in IMG/M
3300012985|Ga0164308_10815419Not Available815Open in IMG/M
3300012987|Ga0164307_11307701Not Available606Open in IMG/M
3300012988|Ga0164306_10621492Not Available849Open in IMG/M
3300012988|Ga0164306_11006743Not Available687Open in IMG/M
3300013296|Ga0157374_10034336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4632Open in IMG/M
3300013297|Ga0157378_10785802All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300013306|Ga0163162_10742145Not Available1101Open in IMG/M
3300013306|Ga0163162_13162546Not Available528Open in IMG/M
3300014326|Ga0157380_13300909Not Available516Open in IMG/M
3300014968|Ga0157379_10128764All Organisms → cellular organisms → Bacteria2278Open in IMG/M
3300015371|Ga0132258_10325585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3790Open in IMG/M
3300015372|Ga0132256_100821231Not Available1046Open in IMG/M
3300015372|Ga0132256_102422614Not Available627Open in IMG/M
3300015374|Ga0132255_103634358Not Available656Open in IMG/M
3300019356|Ga0173481_10794986All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300019361|Ga0173482_10256634Not Available747Open in IMG/M
3300025898|Ga0207692_10070239All Organisms → cellular organisms → Bacteria1843Open in IMG/M
3300025899|Ga0207642_10040007Not Available2043Open in IMG/M
3300025900|Ga0207710_10011462All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3732Open in IMG/M
3300025905|Ga0207685_10213371Not Available914Open in IMG/M
3300025906|Ga0207699_10451170Not Available922Open in IMG/M
3300025911|Ga0207654_10466417Not Available888Open in IMG/M
3300025912|Ga0207707_10814280Not Available777Open in IMG/M
3300025915|Ga0207693_10478004Not Available973Open in IMG/M
3300025915|Ga0207693_10577308Not Available876Open in IMG/M
3300025915|Ga0207693_11237175Not Available561Open in IMG/M
3300025916|Ga0207663_10209111All Organisms → cellular organisms → Bacteria1413Open in IMG/M
3300025924|Ga0207694_10355507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1213Open in IMG/M
3300025926|Ga0207659_11547340Not Available567Open in IMG/M
3300025927|Ga0207687_10292526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium1309Open in IMG/M
3300025929|Ga0207664_10814109Not Available840Open in IMG/M
3300025932|Ga0207690_11439226Not Available576Open in IMG/M
3300025944|Ga0207661_10990874Not Available774Open in IMG/M
3300025949|Ga0207667_10065986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3774Open in IMG/M
3300026041|Ga0207639_10124591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2123Open in IMG/M
3300026075|Ga0207708_10885938Not Available772Open in IMG/M
3300026095|Ga0207676_12009854Not Available577Open in IMG/M
3300027310|Ga0207983_1013607Not Available948Open in IMG/M
3300027725|Ga0209178_1031740All Organisms → cellular organisms → Bacteria1664Open in IMG/M
3300028379|Ga0268266_10571547Not Available1084Open in IMG/M
3300028381|Ga0268264_11156501Not Available783Open in IMG/M
3300028768|Ga0307280_10035190Not Available1515Open in IMG/M
3300031366|Ga0307506_10057254Not Available1157Open in IMG/M
3300031938|Ga0308175_100162650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2155Open in IMG/M
3300031939|Ga0308174_10170840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1636Open in IMG/M
3300032074|Ga0308173_10753849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium893Open in IMG/M
3300032205|Ga0307472_101456342Not Available667Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere20.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil5.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere4.95%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.98%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.98%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.98%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.99%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.99%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005104Soil and rhizosphere microbial communities from Laval, Canada - mgHACEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027310Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J14111_1029135313300001305SoilAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQSEQPSPTD*
C688J18823_1001729753300001686SoilVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQPERPSATD*
C688J18823_1007081433300001686SoilVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQSEQPSPTD*
C688J35102_11905703623300002568SoilMAAVGLRLVAPWERLSVPVQIAIAFPSLSVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVIVATRNELHKRHKLDQPDQPSATE*
Ga0063454_10030521423300004081SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQSEQPSPTD*
Ga0063454_10113225713300004081SoilLAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQPERPSATD*
Ga0062589_10004019233300004156SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD*
Ga0062592_10040459523300004480SoilSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD*
Ga0066818_102494513300005104SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPEPPSATD*
Ga0066823_1001260613300005163SoilVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPEPPSATD*
Ga0070658_1029983323300005327Corn RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD*
Ga0070690_10104076913300005330Switchgrass RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSVTD*
Ga0070670_10077607123300005331Switchgrass RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPALILATRNELQKRHKLDPQQPERPSPSD*
Ga0066388_10216244713300005332Tropical Forest SoilMAVRDIYQRIERPIAGAGLRLMRPWERLAVPVQVGIAFPVLTVLLFLFHLGPLNQPPIRALFYGVFWSVVATPALVLATQNELRKRERKDDAAEPAE*
Ga0070689_10146079113300005340Switchgrass RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQ
Ga0070687_10014847123300005343Switchgrass RhizosphereVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD*
Ga0070675_10115702513300005354Miscanthus RhizosphereVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD*
Ga0070675_10199353923300005354Miscanthus RhizosphereVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIAFPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLATQNELR
Ga0070703_1006641123300005406Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTVSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD*
Ga0070709_1064096023300005434Corn, Switchgrass And Miscanthus RhizosphereVARSFSPWRALAALWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD*
Ga0070714_10032636723300005435Agricultural SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSAAD*
Ga0070713_10032874123300005436Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSAAD*
Ga0070710_1073942023300005437Corn, Switchgrass And Miscanthus RhizosphereMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQSEQPSASD*
Ga0070711_10005435243300005439Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRLIAPWERLSVPVQIAIAFPTLSVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVIVATRNELRKRHRLDKPDQPSASD*
Ga0070711_10160030323300005439Corn, Switchgrass And Miscanthus RhizosphereRPLAAVWRPIERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQAERPPATD*
Ga0070694_10096842213300005444Corn, Switchgrass And Miscanthus RhizosphereVDAQRYPVGVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD*
Ga0070678_10059266123300005456Miscanthus RhizosphereVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD*
Ga0068853_10101808623300005539Corn RhizosphereHGSSWFDAQRYPVGVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPALILATRNELQKRHKLDPQQPERPSPSD*
Ga0070696_10089029613300005546Corn, Switchgrass And Miscanthus RhizosphereTLFGVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD*
Ga0068852_10005559853300005616Corn RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQP
Ga0068860_10075502213300005843Switchgrass RhizosphereLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPALILATRNELQKRHKLDPQQPERPSPSD*
Ga0070717_1004634533300006028Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQAERPPATD*
Ga0066696_1021934813300006032SoilLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD*
Ga0070715_1037983513300006163Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLD
Ga0070712_10029829633300006175Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTFTVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVIVATRNELQKRHKLDNPDQPSASDQRS*
Ga0070712_10057015523300006175Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRLIAPWERLSVPVQIAIAFPTLSVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVIVATRNELQKRHKLDQQQPDQPSATD*
Ga0070712_10160610123300006175Corn, Switchgrass And Miscanthus RhizosphereALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSVTD*
Ga0074053_1113124313300006575SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSILLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPEPP
Ga0074064_1179166933300006603SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPEQPSATD*
Ga0079222_1000143363300006755Agricultural SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHRLDQQQPDAPLPPTD*
Ga0105240_1067543523300009093Corn RhizosphereVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSVTD*
Ga0105245_1033756523300009098Miscanthus RhizosphereVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD*
Ga0105245_1035064423300009098Miscanthus RhizosphereVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIAFPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLATQNELRKRERKDDSTAEPAE*
Ga0105238_1004169673300009551Corn RhizosphereVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPALILATRNELQKRHKLDPQQPERPSPSD*
Ga0126310_1172514813300010044Serpentine SoilPVGVARSFSPWRPLAAVSRPLAAVWRPIERRLAATGLRLVAPWERLSVPVQIAIAFPTLSVVVFLLQMETLNQPPIRAAFYGVFWSILATPAVIVATRNELQKRHKLEQQPKRPSASD*
Ga0134125_1006133943300010371Terrestrial SoilMAPPGSTSNATLFNVARSFSPWRALAALWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD*
Ga0134128_1172292823300010373Terrestrial SoilVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIAFPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLAPQNELRKRERKDDSTAEPAE*
Ga0134128_1235459423300010373Terrestrial SoilDAQRYPVGVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD*
Ga0105239_1152455623300010375Corn RhizosphereRSWLLLRVAGRHVNATLFGVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIAFPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLATQNELRKRERKDDSTAEPAE*
Ga0134126_1217108613300010396Terrestrial SoilVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQ
Ga0134121_1134902613300010401Terrestrial SoilIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD*
Ga0151490_149169323300011107SoilVPRSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPEPPSATD*
Ga0164300_1027992133300012951SoilVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKPDQPQPEQPSATD*
Ga0164299_1108691513300012958SoilVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIAFPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLATQNELRKRERKDESTAEPAE*
Ga0164308_1081541913300012985SoilVWRPIERRLAAVGLRLIAPWERLSVPVQIAIAFPTLSVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVIIATRNELQKRHKLDQQQP
Ga0164307_1130770123300012987SoilSCSLMAPPGSTSNATLFNVARSFSPWRALAAVWRPIERRLAAVGLRLIAPWERLSVPVQIAIAFPTLSVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVIVATRNELQKRHKLDQQQPDQPSATD*
Ga0164306_1062149213300012988SoilVWRPIERRLAAVGLRLIAPWERLSVPVQIAIAFPTLSVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKPDQPQPEQPSATD*
Ga0164306_1100674323300012988SoilGRHANATLFGVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIAFPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLATQNELRKRERKDDSTAEPAE*
Ga0157374_1003433623300013296Miscanthus RhizosphereVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIACPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLATQNELRKRERKDDSTAEPAE*
Ga0157378_1078580223300013297Miscanthus RhizosphereVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLPVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD*
Ga0163162_1074214523300013306Switchgrass RhizosphereVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQ
Ga0163162_1316254613300013306Switchgrass RhizosphereLLLRVAGRHANATLFGVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIAFPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLATQNELRKRERKDDSTAEPAE*
Ga0157380_1330090913300014326Switchgrass RhizospherePIERRLSAVGLRLVALWERLSVPVQIAIAFPTHSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPALILATRNELQKRHKLDPQQPERPSPSD*
Ga0157379_1012876413300014968Switchgrass RhizosphereVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD
Ga0132258_1032558543300015371Arabidopsis RhizosphereMVPPGSTSNATLFNVARSFSPWRALAAVWRPIERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSTTD*
Ga0132256_10082123113300015372Arabidopsis RhizosphereMAPPGSTSNATLFNVARSFSPWRALAAVWRPIERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSTTD*
Ga0132256_10242261423300015372Arabidopsis RhizosphereVYRRIERPIADAGLRLMRPWERLSVPLQIGIAFPVLALLLFLLHLGPLNQPLARAAFYGVFWSVIATPVLVLATQNELRKRERKGESAGQAD*
Ga0132255_10363435823300015374Arabidopsis RhizosphereMAPPGSTSNATLFNVARSFSPWRALAAVWRPIERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSATD*
Ga0173481_1079498623300019356SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQ
Ga0173482_1025663423300019361SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQK
Ga0207692_1007023923300025898Corn, Switchgrass And Miscanthus RhizosphereVWRPFERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQSEQPSASD
Ga0207642_1004000733300025899Miscanthus RhizosphereVARSFSPWRALAALWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD
Ga0207710_1001146233300025900Switchgrass RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD
Ga0207685_1021337113300025905Corn, Switchgrass And Miscanthus RhizospherePFERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD
Ga0207699_1045117023300025906Corn, Switchgrass And Miscanthus RhizosphereVARSFSPWRALAALWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD
Ga0207654_1046641713300025911Corn RhizosphereSETVAPRGPGSSCSLMAPPGSTSNATLFNVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD
Ga0207707_1081428013300025912Corn RhizosphereRALAALWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD
Ga0207693_1047800423300025915Corn, Switchgrass And Miscanthus RhizosphereVWRPVERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSVTD
Ga0207693_1057730823300025915Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTFTVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVIVATRNELQKRHKLDNPDQPSASDQRS
Ga0207693_1123717513300025915Corn, Switchgrass And Miscanthus RhizosphereSPRRPLAAVWRPIERRLAAVGLRMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQAERPSAAD
Ga0207663_1020911123300025916Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRLIAPWERLSVPVQIAIAFPTLSVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVIVATRNELRKRHRLDKPDQPSASD
Ga0207694_1035550723300025924Corn RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPALILATRNELQKRHKLDPQQPERPSPSD
Ga0207659_1154734013300025926Miscanthus RhizosphereVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIAFPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLATQNELRKRERKDDST
Ga0207687_1029252633300025927Miscanthus RhizosphereVAVRDVYRRIERPIADAGLRLMRPWERLSVPVQIGIAFPVLAVLLFLLHLGPLNQPLVRAAFYGLFWSVIATPILVLATQNELRKRERKDDSTAEPAE
Ga0207664_1081410923300025929Agricultural SoilMVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSAAD
Ga0207690_1143922613300025932Corn RhizosphereHGSSWFDAQRYPVGVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD
Ga0207661_1099087413300025944Corn RhizospherePVGVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD
Ga0207667_1006598613300025949Corn RhizosphereLFAHGSSWFDAQRYPVGVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSPSD
Ga0207639_1012459133300026041Corn RhizosphereSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPALILATRNELQKRHKLDPQQPERPSPSD
Ga0207708_1088593813300026075Corn, Switchgrass And Miscanthus RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDPQQPERPSP
Ga0207676_1200985413300026095Switchgrass RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKR
Ga0207983_101360723300027310SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPEPPSATD
Ga0209178_103174023300027725Agricultural SoilVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHRLDQQQPDAPLPPTD
Ga0268266_1057154713300028379Switchgrass RhizosphereHGSSWFDAQRYPVGVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLEQQQPDAPLPPTD
Ga0268264_1115650123300028381Switchgrass RhizosphereVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSVTD
Ga0307280_1003519023300028768SoilVWRPIERRLAAVGLRLIAPWERLSVPVQIAIAFPTLSVVLFLLHLGPLKQPPIRAAFYGVFWSILATPAVIVATRNELQKRHKLDQQQSDQPSATD
Ga0307506_1005725423300031366SoilVWRPIERRLAAVGLRLIAPWERLSVPVQIAIAFPTLSVVLFLLHLGPLKQPPIRAAFYGVFWSILATPAVIVATRNELQKRHKLEQQQPDQPSATD
Ga0308175_10016265043300031938SoilVSRPLAAVWRPIERRLAATGLRLVAPWERLSVPVQIAIAFPTLSVVLFLLHLGPLNQPPIRAAFYGVFWSILATPAVIIATRNELQKRHKLDQQQPKRPSATD
Ga0308174_1017084033300031939SoilVARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQPQRPSATD
Ga0308173_1075384913300032074SoilRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQPERPSATD
Ga0307472_10145634223300032205Hardwood Forest SoilARSFSPWRALAAVWRPIERRLAAVGLRLVAPWERLSVPVQIAIAFPTLSVLLFLLHLGPLNQPPIRAAFYGVFWSILATPAVILATRNELQKRHKLDQQQPERPSAAD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.