NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F103927

Metagenome / Metatranscriptome Family F103927

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103927
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 44 residues
Representative Sequence MIINLLATWIPALLIAFLGVLKLLGNPRVVEEMSKLGVGRYLRLL
Number of Associated Samples 85
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 94.06 %
% of genes near scaffold ends (potentially truncated) 97.03 %
% of genes from short scaffolds (< 2000 bps) 95.05 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.059 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(22.772 % of family members)
Environment Ontology (ENVO) Unclassified
(28.713 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.495 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 53.42%    β-sheet: 0.00%    Coil/Unstructured: 46.58%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF01638HxlR 37.62
PF14499DUF4437 20.79
PF00440TetR_N 5.94
PF13561adh_short_C2 1.98
PF01451LMWPc 1.98
PF02678Pirin 1.98
PF02065Melibiase 0.99
PF06736TMEM175 0.99
PF00175NAD_binding_1 0.99
PF02801Ketoacyl-synt_C 0.99
PF04264YceI 0.99
PF01061ABC2_membrane 0.99
PF10048DUF2282 0.99
PF12681Glyoxalase_2 0.99
PF00857Isochorismatase 0.99
PF02558ApbA 0.99
PF13193AMP-binding_C 0.99
PF07366SnoaL 0.99
PF00085Thioredoxin 0.99
PF12698ABC2_membrane_3 0.99
PF03358FMN_red 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 37.62
COG1741Redox-sensitive bicupin YhaK, pirin superfamilyGeneral function prediction only [R] 1.98
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 0.99
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.99
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 0.99
COG3345Alpha-galactosidaseCarbohydrate transport and metabolism [G] 0.99
COG3548Uncharacterized membrane proteinFunction unknown [S] 0.99

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.06 %
UnclassifiedrootN/A5.94 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_103836361All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii543Open in IMG/M
3300004479|Ga0062595_100475500All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300004479|Ga0062595_102292696All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300005332|Ga0066388_102910035All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium875Open in IMG/M
3300005332|Ga0066388_103245219All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium831Open in IMG/M
3300005467|Ga0070706_100924548All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium805Open in IMG/M
3300005468|Ga0070707_100803367Not Available904Open in IMG/M
3300005468|Ga0070707_102157297All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii525Open in IMG/M
3300005471|Ga0070698_100422579All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300005518|Ga0070699_101981049All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium532Open in IMG/M
3300005552|Ga0066701_10321835All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300005921|Ga0070766_10973348All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus583Open in IMG/M
3300006028|Ga0070717_12160618All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300006049|Ga0075417_10134760All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300006058|Ga0075432_10390555All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300006163|Ga0070715_11009161All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300006358|Ga0068871_100528003All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300006844|Ga0075428_102540950All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii524Open in IMG/M
3300006852|Ga0075433_10669693All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300006853|Ga0075420_101882737All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300006871|Ga0075434_101964446All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300006903|Ga0075426_10636715All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300006903|Ga0075426_11540339All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium505Open in IMG/M
3300007076|Ga0075435_100607590All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300007076|Ga0075435_100756145All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300007255|Ga0099791_10237314All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii863Open in IMG/M
3300009012|Ga0066710_102532495All Organisms → cellular organisms → Bacteria → Acidobacteria741Open in IMG/M
3300009088|Ga0099830_11157729All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium642Open in IMG/M
3300009147|Ga0114129_10818284All Organisms → cellular organisms → Bacteria → Proteobacteria1187Open in IMG/M
3300009522|Ga0116218_1105167All Organisms → cellular organisms → Bacteria1285Open in IMG/M
3300009792|Ga0126374_10974535All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes663Open in IMG/M
3300010046|Ga0126384_10653752All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii926Open in IMG/M
3300010329|Ga0134111_10312891All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii656Open in IMG/M
3300010366|Ga0126379_11294268All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium835Open in IMG/M
3300010376|Ga0126381_102208815All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium791Open in IMG/M
3300011269|Ga0137392_10191203All Organisms → cellular organisms → Bacteria1670Open in IMG/M
3300011271|Ga0137393_10265551All Organisms → cellular organisms → Bacteria1458Open in IMG/M
3300012189|Ga0137388_11547461All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300012203|Ga0137399_10268598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1402Open in IMG/M
3300012209|Ga0137379_11299990All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii633Open in IMG/M
3300012211|Ga0137377_10957726All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii787Open in IMG/M
3300012363|Ga0137390_11493644All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium617Open in IMG/M
3300012363|Ga0137390_11819409Not Available540Open in IMG/M
3300012685|Ga0137397_10170386All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii1616Open in IMG/M
3300012685|Ga0137397_10181282All Organisms → cellular organisms → Bacteria1564Open in IMG/M
3300012917|Ga0137395_10799189All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium683Open in IMG/M
3300012923|Ga0137359_11547663All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii551Open in IMG/M
3300012925|Ga0137419_10630141All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300012927|Ga0137416_12041872Not Available526Open in IMG/M
3300012930|Ga0137407_11329981All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii683Open in IMG/M
3300012948|Ga0126375_10277930All Organisms → cellular organisms → Bacteria → Proteobacteria1150Open in IMG/M
3300012971|Ga0126369_10435427All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1357Open in IMG/M
3300014164|Ga0181532_10709638All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus542Open in IMG/M
3300014165|Ga0181523_10818493All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus507Open in IMG/M
3300014878|Ga0180065_1069939All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300015054|Ga0137420_1310425All Organisms → cellular organisms → Bacteria4276Open in IMG/M
3300016294|Ga0182041_10785833All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300016422|Ga0182039_10445814All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1108Open in IMG/M
3300016422|Ga0182039_11944922All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii540Open in IMG/M
3300017927|Ga0187824_10145406All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus783Open in IMG/M
3300018476|Ga0190274_13725758All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300021168|Ga0210406_10310460All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii1280Open in IMG/M
3300021170|Ga0210400_11530064All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii528Open in IMG/M
3300021559|Ga0210409_11156164All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium649Open in IMG/M
3300025905|Ga0207685_10680255All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii559Open in IMG/M
3300025922|Ga0207646_10017206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. OHSU_II-uncloned6771Open in IMG/M
3300025922|Ga0207646_11502455All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium583Open in IMG/M
3300025939|Ga0207665_11213692Not Available602Open in IMG/M
3300025941|Ga0207711_10513930All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii1117Open in IMG/M
3300026088|Ga0207641_12401152All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii526Open in IMG/M
3300026285|Ga0209438_1006121All Organisms → cellular organisms → Bacteria → Acidobacteria4088Open in IMG/M
3300027527|Ga0209684_1011882All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300027669|Ga0208981_1150041Not Available592Open in IMG/M
3300027669|Ga0208981_1155535All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii580Open in IMG/M
3300027869|Ga0209579_10754642All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus526Open in IMG/M
3300027873|Ga0209814_10117814All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1132Open in IMG/M
3300027875|Ga0209283_10533065All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium752Open in IMG/M
3300027875|Ga0209283_10766424Not Available597Open in IMG/M
3300027875|Ga0209283_10819390All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus570Open in IMG/M
3300027882|Ga0209590_10798606All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium600Open in IMG/M
3300027903|Ga0209488_10814317All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300028380|Ga0268265_10549813All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii1096Open in IMG/M
3300029636|Ga0222749_10056765All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae1743Open in IMG/M
3300029636|Ga0222749_10316713All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium810Open in IMG/M
3300031152|Ga0307501_10145738All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii639Open in IMG/M
3300031456|Ga0307513_10866580All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii610Open in IMG/M
3300031474|Ga0170818_109113994All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii576Open in IMG/M
3300031720|Ga0307469_10300953All Organisms → cellular organisms → Bacteria1321Open in IMG/M
3300031754|Ga0307475_11225729All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium583Open in IMG/M
3300031798|Ga0318523_10204482All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii986Open in IMG/M
3300031820|Ga0307473_10306915All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300031823|Ga0307478_10259416All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300031912|Ga0306921_10061218All Organisms → cellular organisms → Bacteria4296Open in IMG/M
3300031962|Ga0307479_10679198All Organisms → cellular organisms → Bacteria → Proteobacteria1009Open in IMG/M
3300031962|Ga0307479_11198981All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii723Open in IMG/M
3300031962|Ga0307479_11434948All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium648Open in IMG/M
3300032068|Ga0318553_10610928All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii571Open in IMG/M
3300032160|Ga0311301_10005562All Organisms → cellular organisms → Bacteria43882Open in IMG/M
3300032174|Ga0307470_11498833All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii561Open in IMG/M
3300032174|Ga0307470_11816666All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium516Open in IMG/M
3300032180|Ga0307471_103969459All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Bacteriovoracaceae → Bacteriovorax → Bacteriovorax stolpii523Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil9.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.97%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.98%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.98%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.99%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.99%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.99%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.99%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.99%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.99%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014878Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10DEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027527Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10383636113300000955SoilMVIQLLATWVPALLIGLSGVLKLTRNPKIVETMTALGVGRH
Ga0062595_10047550013300004479SoilMLIHVLATWIPALLIGLSGVLKLTGNPKIVETMTALGVGRRLRLLGVMELAFA
Ga0062595_10229269613300004479SoilVGARIVIQLLATWVPALLIGLSGVLKLTRNPKIVETMTALGVGR
Ga0066388_10291003523300005332Tropical Forest SoilMIINLIATWIPALGIAFLGVLKLTRNARVAREMSELGVGRYLRLL
Ga0066388_10324521923300005332Tropical Forest SoilPALMIALLGVLKLSGIPRIAEEMSKLGVGRYLRLLGVMEIAFAALLSSQPQ*
Ga0070706_10092454813300005467Corn, Switchgrass And Miscanthus RhizosphereMIIYLLATWIPALLIALLGVLKLTGNPRVAEEMSKLGVGRYLRLLGVM
Ga0070707_10080336713300005468Corn, Switchgrass And Miscanthus RhizosphereMLIQLVATWVPALLIGLSGVLKVSGNPKIVQTMTSLGVGRHVRML
Ga0070707_10215729723300005468Corn, Switchgrass And Miscanthus RhizosphereVVQLLATWIPALLIALSGVLKLSGNPKIVEGMAALGVGRYVR
Ga0070698_10042257933300005471Corn, Switchgrass And Miscanthus RhizosphereMVIQLLATWIPALLIALSGVLKLSGNPKIVEGMAALGVGRYVRLLGVMEL
Ga0070699_10198104913300005518Corn, Switchgrass And Miscanthus RhizosphereMIINLLATWIPALGIAFLGVLKLLGNSRVVEEMSKLGVGRYLR
Ga0066701_1032183533300005552SoilMIINLLVSWIPALGIAFLGVLKLLGNSRVVEEMSK
Ga0070766_1097334813300005921SoilMTINMFATWIPALLIGVGGVLKLSGNPTIAGEMSKLGVGRY
Ga0070717_1216061823300006028Corn, Switchgrass And Miscanthus RhizosphereMITNLLATWIPALLIAFLGVLKLTNNPRVVEEMSKVGVGRYLRLLGV
Ga0075417_1013476023300006049Populus RhizosphereMIVQLLATWIPALLIALSGVMKLAGNPKILEGMTTLGVGRYVRLLGVMELA
Ga0075432_1039055513300006058Populus RhizosphereMIINLLATWIPALGIAFLGVLKLTGNPRVAEEMSKLGVGRYLRLLGVME
Ga0070715_1100916113300006163Corn, Switchgrass And Miscanthus RhizosphereMIINLLATWIPALLIAFLGVLKLLRISRVVEEMSKVGVGRYLR
Ga0068871_10052800313300006358Miscanthus RhizosphereMLVRLLATWIPALLIGLSGVLKLTGNPKILETMTALGVGR
Ga0075428_10254095023300006844Populus RhizosphereMLIQLLATWIPALLIGLSGVLKLTGNPKIVETMTAL
Ga0075433_1066969313300006852Populus RhizosphereMIINLLATWIPALGIAFLGALKLTGNPRVAEEMSKVGVGPYLRLLGVME
Ga0075420_10188273723300006853Populus RhizosphereVVQLLATWIPALLIALSGVLKLSGNPKIVETMTALGVGRHVRLL
Ga0075434_10196444623300006871Populus RhizosphereMVVQLLATWIPALLIALSGVLKLSGNPKIVETMTALGVGRHVRLL
Ga0075426_1063671523300006903Populus RhizosphereMIINLLTTWIPALGIAFLGVLKLTGNPRVAEEMSKLGVGRYLRLLGVMEIAFA
Ga0075426_1154033913300006903Populus RhizosphereMIINLLATWIPALGIAFLGVLKLTGNPRVAEEMSK
Ga0075435_10060759013300007076Populus RhizosphereMIINLLATWIPALLIAFLGVLKLLGNPRVVQEMSRV
Ga0075435_10075614513300007076Populus RhizosphereVVQLLATWIPALLIALSGVLKLSGNPKIVEGMAALGVGRYVRLLGVMEVAFAAL
Ga0099791_1023731413300007255Vadose Zone SoilMVVQLLATWIPALLIALSGVLKLSGNPKIVETMTALGVGRHVRVLGVMEVA
Ga0066710_10253249513300009012Grasslands SoilMIINLLATWIPALLIALSGVLKLSGNAKIVESLCRDLSSRA
Ga0099830_1115772923300009088Vadose Zone SoilMIINLLATWIPALGIAFLGALKLLGNSRVVEEMSKLGVGRYLRLLGVMEIAFAALF
Ga0114129_1081828413300009147Populus RhizosphereMIINPLATWIPVLGIAFMGVLKLTGNPRIAKELSKLGVG
Ga0116218_110516733300009522Peatlands SoilMIINLFATWIPALLIGIGGLLKLSGNPKIAGEMSKLGVGRYLR
Ga0126374_1097453513300009792Tropical Forest SoilAIGTGASMIINLLATWIPALGIAFLGVLKLTGNPRVAEELSKLGVGRYLRLLGVM*
Ga0126384_1065375213300010046Tropical Forest SoilMIINLLATWIPALLIGLSGALKLSGNPKIVEGMSKLGVGRYLGLLGVM
Ga0134111_1031289123300010329Grasslands SoilMLIHLLATWIPALLIALSGVLKLSGNPKILETMTALGVGRHVR
Ga0126379_1129426813300010366Tropical Forest SoilMVIYQLATWMPAVLIAFSGVLKLSGNPKMVGEMSQLGVGRYLRLLG
Ga0126381_10220881523300010376Tropical Forest SoilMIISLLATWIPALGIAFLGVLKLTGSPRVAEEMSKLGVGRYLRLLR
Ga0137392_1019120313300011269Vadose Zone SoilMVVQFLATWIPALLIALSGVLKLSGNPKIVEGMAALGVGRYVRLLGVMELAF
Ga0137393_1026555133300011271Vadose Zone SoilMVVQALATWIPALLIALSGVLKLSGNPKIMEGMTQLG
Ga0137388_1154746123300012189Vadose Zone SoilMIVQLLATWIPALLIALSGVMKLSGSPKILESMTTLGVGRYVRLLGVIELAF
Ga0137399_1026859813300012203Vadose Zone SoilMIVQLLATWIPALLIALSGVMKLSGNPKILEGMTTLGVGRYVRLLGVMEL
Ga0137379_1129999013300012209Vadose Zone SoilMLIQLLATWIPALMIGLSGVLKLTGNAKIVERMTALGVGRHVRLL
Ga0137377_1095772613300012211Vadose Zone SoilMVVQLLATWIPALLIALSGVLKLSGNPKIVEGMAALGVGRYVRLLGVMELVFAALF
Ga0137390_1149364413300012363Vadose Zone SoilMIINLLATWIPALGIAFLGVLKLLGNSRVVEEMSKLGVGRYLRLL
Ga0137390_1181940923300012363Vadose Zone SoilMIINLLATWIPALLIALLGVLKLTGNPRVAEEMSKLGVGRYLRLLGVMEIA
Ga0137397_1017038613300012685Vadose Zone SoilMIVQLLATWIPALLIALSGVMKLSGNSKILEGMTKLGVG
Ga0137397_1018128213300012685Vadose Zone SoilMLIHLLATWIPALLIALSGVLKLSGNPKIVETMTALGVGRHLRLLGVMELAF
Ga0137395_1079918923300012917Vadose Zone SoilMIINLLATWIPALGIAFLGVLKLTGNPRVAEEMSKLGVGRYLRLLGVMEI
Ga0137359_1154766313300012923Vadose Zone SoilMYTTVTIEGRMLIQLLATWIPALLIALSGVLKLSGNPKIVAGMAALGVGRYVRL
Ga0137419_1063014113300012925Vadose Zone SoilMITELLATWIPALLIALSGVMKLSGNPKILEGMTALGVGRYVR
Ga0137416_1204187213300012927Vadose Zone SoilMIVQLLATWIPALLIALSGVLKLTGSPQVLETMTALGVGRHVRLLGVME
Ga0137407_1132998113300012930Vadose Zone SoilMVIQLLATWIPALLIALSGVLKLSGNPKIVEGMAALGGERYVQLLGVMELA
Ga0126375_1027793033300012948Tropical Forest SoilMIINLLATWIPALLIALSGALKLSGNPMIVETMSKLG
Ga0126369_1043542733300012971Tropical Forest SoilMVIYQFATWMPAVLIAFSGVLKLSGNPKMVQEMSQLGVGRYLRLLGAMEV
Ga0181532_1070963813300014164BogMIINLFATWIPALLIGLGGLLKLSGNPKIAGEMSKLGVGRYLRL
Ga0181523_1081849313300014165BogMIINLFATWIPALLIGLGGLLKLSGNPKIAGEMSKLGVGRYLRLLGV
Ga0180065_106993933300014878SoilMLIQLLATWIPALLIGLSGVLKLTSNPKILETMTALGVGRHVRLLGVMEL
Ga0137420_1310425103300015054Vadose Zone SoilMVIQLLATWIPALLIALSVCAEVVGQSEIVEGMAALGVGRYVRLLA*
Ga0182041_1078583333300016294SoilMMVERLATWIPALLIALSGVMKWTRNPQILESMTALGVKRY
Ga0182039_1044581413300016422SoilMIINLLATWIPALGIAFLGVLKLTGNPRVAEEMSKLGVG
Ga0182039_1194492213300016422SoilMVLDLLATWIPALLIALSGVMKLTGNAQILETMKTLGVGR
Ga0187824_1014540623300017927Freshwater SedimentMIINMLATWIPAVLIAISGALKLSGIPKIVEQLTKLG
Ga0190274_1372575823300018476SoilMLIQLLATWIPALLIGLSGVLKLTGNPKILETMTALGVGRH
Ga0210406_1031046013300021168SoilMIINLLAAWIPALLIALSGVMKLSRQPRIVDGMSKLGVGHYLVLLGVMEI
Ga0210400_1153006413300021170SoilMIVQLLATWIPALLIALSGVMKLTGNSQVLEAMTA
Ga0210409_1115616413300021559SoilMIINLLATWIPALLIALLGVLKLTGNPRVVEEMSK
Ga0207685_1068025523300025905Corn, Switchgrass And Miscanthus RhizosphereMLIQLLATWIPALLIGLSGVLKLTGNPKILETMTALGVGRHVRLL
Ga0207646_1001720613300025922Corn, Switchgrass And Miscanthus RhizosphereMIINLIATWIPALGIAFLGVLKLTGNPRVAEEMSKLGVGRYLR
Ga0207646_1150245513300025922Corn, Switchgrass And Miscanthus RhizosphereMIVNLLATWIPALIIALLGVLKLVGNRQVVQELTALGVGRHLRVLGVMELAFATLFVIPATFKLGFL
Ga0207665_1121369223300025939Corn, Switchgrass And Miscanthus RhizosphereMIINLLATWIPALGIAFLGILKLTGNPRVAEEMSELGVGRYLRLLGVME
Ga0207711_1051393023300025941Switchgrass RhizosphereMVVQLLATWIPALLIALSGVLKLSGNPKIVETMTALGVGR
Ga0207641_1240115213300026088Switchgrass RhizosphereVVQLLATWIPALLIALSGVLKLSGNPKIVETMTALGVGRH
Ga0209438_100612153300026285Grasslands SoilMLIQLLATWIPALLIGLSGVLKLSGNPRILETMTTL
Ga0209684_101188233300027527Tropical Forest SoilMIINLLATWIPALLVAFLGVLKLTGNARVADEMSKLGV
Ga0208981_115004123300027669Forest SoilMIVQLLATWIPALLIALSGVMKLSGNPKILEGMRTL
Ga0208981_115553523300027669Forest SoilMVIQLLATWVPALLIALSGVLKLSGNPKIVEGMAALGVGRYVRLLG
Ga0209579_1075464223300027869Surface SoilMTINLFATWIPALLIGVGGVLKLSGNPTIAGEMSKLGVGRYLR
Ga0209814_1011781413300027873Populus RhizosphereMIVQLLATWIPALLIALSGVMKLAGNPKILEGMTTLGVGRYVRLLGVM
Ga0209283_1053306523300027875Vadose Zone SoilMIINLLATWIPALGIAFLGVLKLTGNPRVAEEMSKVGVGRYLRLLGVMEI
Ga0209283_1076642423300027875Vadose Zone SoilMIINLLATWIPALLIALLGVLKLTGNPRVAEEMSKL
Ga0209283_1081939013300027875Vadose Zone SoilMIVKLLATWIPALMIALLGVLKLAGNRRVIHELTALGVGRHLRVLGV
Ga0209590_1079860623300027882Vadose Zone SoilMIINLLATWIPALGIAFLGVLKLLGNSRVVEEMSKLGVGRYLRLLGVMEIAFA
Ga0209488_1081431713300027903Vadose Zone SoilMIVKLLATWIPALMIALLGVLKLAGNRRVIHELTALGVGRHLRVLGVMELAFATLFVITATF
Ga0268265_1054981313300028380Switchgrass RhizosphereMIVQVLATWIPALLIALSGVLKLTGNPAILETMTTLGVGPYVR
Ga0222749_1005676513300029636SoilMIINLLATWIPALLIAFMGALKLTGNPRIAKELSSLGVGRYL
Ga0222749_1031671323300029636SoilMIINLLATWIPAPVIAFLGVLKLTGNPRVAEEMSKLG
Ga0307501_1014573813300031152SoilMLIHLLATWIPALLIGLSGVLKLSGNPKILETMTTLGVGRYVRLLGV
Ga0307513_1086658013300031456EctomycorrhizaMLIQLLATWIPALLIGLSGVLKLTGNAKIVEGMAGLG
Ga0170818_10911399423300031474Forest SoilMVIQLLATWIPALMIGLSGVLKLTGNPKIVEAMTTLGVGR
Ga0307469_1030095313300031720Hardwood Forest SoilMIINLLATWIPALLIAFLGVLKLLGNPRVVEEMSKLGVGRYLRLL
Ga0307475_1122572923300031754Hardwood Forest SoilMIINLVATWIPALGIAFLGVLKLTGNPRVAEEMSKVGVGRDYFAQRVPTK
Ga0318523_1020448233300031798SoilMVIELLATWIPALVVALSGAMKLAGNPAILKGMTALGVRRYV
Ga0307473_1030691513300031820Hardwood Forest SoilMIINLLATWIPALGIAFLGVLKLTGNPRVAEEMSKL
Ga0307478_1025941613300031823Hardwood Forest SoilMIISLLATWIPALLIALLGLLKLSGNPNVAEEMSKAGVGRYLRLLGVMEIAF
Ga0306921_1006121853300031912SoilMVIELLATWIPALVVALSGAMKLAGNPAILKGMTAL
Ga0307479_1067919833300031962Hardwood Forest SoilMITNLLATWIPALLIAFLGVLKLTNNPRVVEEMSKV
Ga0307479_1119898123300031962Hardwood Forest SoilVVQLLATWIPALLIALSGVLKLSGNPKIVEGMAALGVG
Ga0307479_1143494813300031962Hardwood Forest SoilMIINLLATWIPALGITFLGVLKLTGNPRVAEEMSKVG
Ga0318553_1061092813300032068SoilMIVELLATWIPALVVALSGAMKLAGNPTILEGMTA
Ga0311301_10005562373300032160Peatlands SoilMIITLFATWIPTLLIGVGGVLKLSGNPKIAGEMSKLGVGRYLRLLGGIDIALA
Ga0307470_1149883313300032174Hardwood Forest SoilVVQLLATWIPALLIALSGVLKLSGNPKIVETMTALGVGRHVRLLGVM
Ga0307470_1181666613300032174Hardwood Forest SoilMIIKLVATWIPALLIAFLGVLKLLGNPRVVQEMSRV
Ga0307471_10396945923300032180Hardwood Forest SoilMLIQLLATWIPALLIGLSGVLKLTGNPKILEAMTAVGVGRHVRLLGVME

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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