NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F103909

Metagenome Family F103909

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103909
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 76 residues
Representative Sequence MRDYSITRKEGEWYNAKVTDSFGVDHQNYFEHAHEANDWIMYVWAKELPPLTDEEREELLANAIHDCKQIDAESGRRAIL
Number of Associated Samples 66
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 40.59 %
% of genes near scaffold ends (potentially truncated) 46.53 %
% of genes from short scaffolds (< 2000 bps) 92.08 %
Associated GOLD sequencing projects 54
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (40.594 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(37.624 % of family members)
Environment Ontology (ENVO) Unclassified
(84.158 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.168 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.41%    β-sheet: 15.74%    Coil/Unstructured: 51.85%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF12684DUF3799 0.99



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.41 %
UnclassifiedrootN/A40.59 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10086511All Organisms → Viruses → Predicted Viral1361Open in IMG/M
3300000116|DelMOSpr2010_c10226319Not Available583Open in IMG/M
3300001450|JGI24006J15134_10083213Not Available1191Open in IMG/M
3300001589|JGI24005J15628_10041514All Organisms → Viruses → Predicted Viral1847Open in IMG/M
3300001589|JGI24005J15628_10048485All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571656Open in IMG/M
3300006164|Ga0075441_10041159All Organisms → Viruses → Predicted Viral1855Open in IMG/M
3300006164|Ga0075441_10123226All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157986Open in IMG/M
3300006164|Ga0075441_10124582All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157980Open in IMG/M
3300006164|Ga0075441_10155893Not Available860Open in IMG/M
3300006164|Ga0075441_10229150All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157687Open in IMG/M
3300006164|Ga0075441_10389800Not Available504Open in IMG/M
3300006190|Ga0075446_10050557All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571289Open in IMG/M
3300006190|Ga0075446_10241219Not Available500Open in IMG/M
3300006191|Ga0075447_10216438Not Available627Open in IMG/M
3300006193|Ga0075445_10134589Not Available897Open in IMG/M
3300006193|Ga0075445_10304301All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157538Open in IMG/M
3300006738|Ga0098035_1104741All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157983Open in IMG/M
3300006738|Ga0098035_1319248Not Available504Open in IMG/M
3300006753|Ga0098039_1042647All Organisms → Viruses → Predicted Viral1599Open in IMG/M
3300006753|Ga0098039_1308680Not Available528Open in IMG/M
3300006789|Ga0098054_1010847All Organisms → Viruses → Predicted Viral3756Open in IMG/M
3300006916|Ga0070750_10273970Not Available727Open in IMG/M
3300006920|Ga0070748_1316533All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium553Open in IMG/M
3300006921|Ga0098060_1209649Not Available531Open in IMG/M
3300006922|Ga0098045_1090535All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium726Open in IMG/M
3300006922|Ga0098045_1103356All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium671Open in IMG/M
3300006924|Ga0098051_1168171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium577Open in IMG/M
3300006925|Ga0098050_1088055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium798Open in IMG/M
3300006927|Ga0098034_1034485All Organisms → Viruses → Predicted Viral1520Open in IMG/M
3300006947|Ga0075444_10065845All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571664Open in IMG/M
3300006947|Ga0075444_10246922Not Available703Open in IMG/M
3300006990|Ga0098046_1111312All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium604Open in IMG/M
3300007539|Ga0099849_1090502All Organisms → Viruses → Predicted Viral1228Open in IMG/M
3300007962|Ga0102907_1008183All Organisms → Viruses → Predicted Viral3155Open in IMG/M
3300008050|Ga0098052_1295272Not Available613Open in IMG/M
3300008221|Ga0114916_1110139All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157656Open in IMG/M
3300009079|Ga0102814_10311726All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157856Open in IMG/M
3300009425|Ga0114997_10052411All Organisms → Viruses → Predicted Viral2618Open in IMG/M
3300009428|Ga0114915_1050805All Organisms → Viruses → Predicted Viral1337Open in IMG/M
3300009428|Ga0114915_1142118Not Available686Open in IMG/M
3300009428|Ga0114915_1216957Not Available522Open in IMG/M
3300009512|Ga0115003_10249086All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571058Open in IMG/M
3300009512|Ga0115003_10258559All Organisms → Viruses → Predicted Viral1036Open in IMG/M
3300009785|Ga0115001_10498578Not Available752Open in IMG/M
3300009785|Ga0115001_10621237All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157659Open in IMG/M
3300010151|Ga0098061_1296371All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium557Open in IMG/M
3300010153|Ga0098059_1144732All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium937Open in IMG/M
3300010153|Ga0098059_1270057Not Available653Open in IMG/M
3300010155|Ga0098047_10419490Not Available500Open in IMG/M
3300010883|Ga0133547_10742516All Organisms → Viruses → Predicted Viral1937Open in IMG/M
3300010883|Ga0133547_11903513All Organisms → Viruses → Predicted Viral1094Open in IMG/M
3300010883|Ga0133547_12204271All Organisms → Viruses → Predicted Viral1000Open in IMG/M
3300017715|Ga0181370_1047211All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium554Open in IMG/M
3300017729|Ga0181396_1098305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium597Open in IMG/M
3300017731|Ga0181416_1127403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium612Open in IMG/M
3300017744|Ga0181397_1140217All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium622Open in IMG/M
3300017753|Ga0181407_1126098Not Available637Open in IMG/M
3300017786|Ga0181424_10115318All Organisms → Viruses → Predicted Viral1158Open in IMG/M
3300022072|Ga0196889_1061641Not Available716Open in IMG/M
(restricted) 3300023210|Ga0233412_10016128All Organisms → Viruses → Predicted Viral2964Open in IMG/M
3300024348|Ga0244776_10648658Not Available659Open in IMG/M
3300025066|Ga0208012_1000289Not Available19121Open in IMG/M
3300025108|Ga0208793_1177676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium546Open in IMG/M
3300025109|Ga0208553_1138914All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium539Open in IMG/M
3300025138|Ga0209634_1040380All Organisms → Viruses → Predicted Viral2383Open in IMG/M
3300025141|Ga0209756_1193314All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium784Open in IMG/M
3300025168|Ga0209337_1217025All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157762Open in IMG/M
3300025168|Ga0209337_1341760Not Available517Open in IMG/M
3300025276|Ga0208814_1074140Not Available920Open in IMG/M
3300025276|Ga0208814_1093127All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157773Open in IMG/M
3300025645|Ga0208643_1100070Not Available796Open in IMG/M
3300027251|Ga0208809_1020640All Organisms → Viruses → Predicted Viral1239Open in IMG/M
3300027668|Ga0209482_1222006Not Available512Open in IMG/M
3300027672|Ga0209383_1050819All Organisms → Viruses → Predicted Viral1553Open in IMG/M
3300027672|Ga0209383_1162419Not Available683Open in IMG/M
3300027704|Ga0209816_1006738Not Available7189Open in IMG/M
3300027704|Ga0209816_1054291All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571781Open in IMG/M
3300027704|Ga0209816_1059572All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571664Open in IMG/M
3300027704|Ga0209816_1123632All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157967Open in IMG/M
3300027704|Ga0209816_1189424Not Available694Open in IMG/M
3300027714|Ga0209815_1123861Not Available843Open in IMG/M
3300027714|Ga0209815_1123904Not Available843Open in IMG/M
3300027714|Ga0209815_1230428Not Available563Open in IMG/M
3300027788|Ga0209711_10203158Not Available912Open in IMG/M
3300027788|Ga0209711_10313741All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157673Open in IMG/M
(restricted) 3300027861|Ga0233415_10528121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium572Open in IMG/M
3300028125|Ga0256368_1023927All Organisms → Viruses → Predicted Viral1084Open in IMG/M
3300028125|Ga0256368_1057533Not Available677Open in IMG/M
3300028125|Ga0256368_1082519Not Available546Open in IMG/M
3300031140|Ga0308024_1029123All Organisms → Viruses → Predicted Viral1537Open in IMG/M
3300031519|Ga0307488_10173556All Organisms → Viruses → Predicted Viral1486Open in IMG/M
3300031519|Ga0307488_10604787Not Available636Open in IMG/M
3300031519|Ga0307488_10620577Not Available624Open in IMG/M
3300031658|Ga0307984_1060208All Organisms → Viruses → Predicted Viral1165Open in IMG/M
3300031658|Ga0307984_1087915Not Available916Open in IMG/M
3300031660|Ga0307994_1195414Not Available645Open in IMG/M
3300031688|Ga0308011_10227648Not Available561Open in IMG/M
3300031696|Ga0307995_1029640All Organisms → Viruses → Predicted Viral2412Open in IMG/M
3300032277|Ga0316202_10369753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium669Open in IMG/M
3300033742|Ga0314858_147556Not Available604Open in IMG/M
3300033742|Ga0314858_186494All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157533Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine37.62%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine23.76%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean5.94%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.94%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous4.95%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine4.95%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.95%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine3.96%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine2.97%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.98%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.98%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.99%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007962Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017715Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaGEnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027251Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027704Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300031140Marine microbial communities from water near the shore, Antarctic Ocean - #420EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300031660Marine microbial communities from Ellis Fjord, Antarctic Ocean - #261EnvironmentalOpen in IMG/M
3300031688Marine microbial communities from water near the shore, Antarctic Ocean - #177EnvironmentalOpen in IMG/M
3300031696Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1008651113300000101MarineMSVRKWSITRKEGEWYNAKVTDSFGESHQNWFENANEANDWIYYMWETEKPLLDQDEQDELLANAIHDCRQIDQRRGLR
DelMOSpr2010_1022631933300000116MarineMSERKWSITRKEGEWYNAKVTDSFGESHQNWFENANEANDWIYYVWETERPPLDQEERDELLANAIHDCRQIDQRRGLRAIL*
JGI24006J15134_1008321333300001450MarineMSQRDFSITRREGEWYNAEVTDSFGEKHQNWFETSNEAHDWIYYVWETEKPPLDQEERDELLANAIHDCRQI
JGI24005J15628_1004151453300001589MarineMSILSERDFSISRKEGEWYNARVTDSYGVKHQNWFETSNEAHDWIYYMWETEKPALDRDEQDELLANAIHDCRQIDQRAGLRAIL*
JGI24005J15628_1004848533300001589MarineMSQRDFSITRREGEWYNAEVTDSFGEKHQNWFETSNEAHDWIYYVWETEKPPLDQEERDELLANAIHDCRQIDQRAGLRAIL*
Ga0075441_1004115953300006164MarineMSIRKWSITRIEGEWYNAKVTDSFGESHQNWFEQASEANDWIYYIWETERPPLDQEERDELLANAVHDCRQIDHRRGLRAIL*
Ga0075441_1012322623300006164MarineMSIRKWSITRIEGEWYNAKVTDSFGESHQNWFEQANEANDWIYYIWETEKPPLTTEEQDELLANAIHDCRQIDHRRGLRAIL*
Ga0075441_1012458223300006164MarineMRDYSITKKSGEWHNAKVTDSFGVEHQNYYKTEQECINWIYWMWEKELPPLTHEEQDELLANAIHDCKQIDIERGLRAIL*
Ga0075441_1015589333300006164MarineMRDYSITKKEGEWYNAKVTDSFGVDHQNYYETESESINWVYYMWEKELPPLTSEEQDELLADAIHDCKQIDQLAGFKAIL*
Ga0075441_1022915023300006164MarineMSIRKWSITKVEGEWYNAKCTDSYGVSHQNWFEHAYDANDWIYYMWETEKPPLDQDEQDELLANAIHDCRQIDQRAGLRAIL*
Ga0075441_1038980023300006164MarineMSIRKWSITRLEGEWYNAKVTDSFGESHQNWFEEANEANDWIYYIWETEKPPLDQEERDELLANAIH
Ga0075446_1005055733300006190MarineMRDYSITKKSGEWHNAKVTDSFGVEHQNYYETEQECINWIYWMWEKELPPLTTEEQDELLANAIHDCKQIDIERGLRAIL*
Ga0075446_1024121933300006190MarineMRDYNITRKEGEWYNAKVTDSFGGEFQNYFEHTHEASDWIYYIWENEKPPLTKEEQMESL
Ga0075447_1021643833300006191MarineMRDYSITKKEGEWYNAKVTDSFGVDHQNYYETESECVNWVFYIWEKELPPLTTEEQDELL
Ga0075445_1013458913300006193MarineMSIRKWSITKVEGEWYNAKCTDSYGVSHQNWFEHAYDANDWIYYMWETEKPPLDQDE
Ga0075445_1030430113300006193MarineMSIRKWSITRIEGEWYNAKVTDSFGESHQNWFEQANEANDWIYYIWETEKPPLDQEERDELLANAIHDCRQIDQRRGLRAIL*
Ga0098035_110474123300006738MarineMRDYSITRRKGEWYDTRVTDSYGNKYQNYFEHAHEATDWIMYIWEKELPPLTDAEREELLASAIHDCKQMDKRSGRRAIL*
Ga0098035_131924823300006738MarineMVQKQKINMRDYSIIKRNGEWYNAKVIDSFGIEHQNYYETEKECINWIYWIWEKELPPLTTEERDELLANAIHECKQMDEKAGRRAIL*
Ga0098039_104264733300006753MarineMRDYSITRRKGEWYNAKVTDSFGVEHQNYFEHAHEANDWIMYIWEKELPPLTDAEREELLASAIHDCKQMDKRSGRRAIL*
Ga0098039_130868013300006753MarineMRNYKITRSNGEWYNAKVIDSFGIEHQNYYETEKECINWIYWIWEKELPPLTTEERDELLANAIHECKQIDEKAGRRAIL*
Ga0098054_101084753300006789MarineMRDYSITRRKGEWYDAKVTDSFGVEHQNYFEHAHEANDWIMYIWEKELPPLTDAEREELLASAIHDCKQMDKRSGRRAIL*
Ga0070750_1027397033300006916AqueousMRDFKITRNKGEMYNAEVTDSYGRKYQNYFEHAHEANEWIMYIWESELPPLTDEEREELLANAIHDCKQMDAESGRRAIL**
Ga0070748_131653323300006920AqueousMRDYSITRKEGEWYNAKVTDSFGVDHQNYFEHAHEANDWIMYVWAKELPPLTDAECEELLADAIHDCKQMDAEAGRRAIL*
Ga0098060_120964913300006921MarineMRDFSITRKEGEWYNAKVTDSFGVNHQNYFEHAHEANNWIMYVWAKELPPLTDAECEELLANAIHDCKQMDAEAGRRAIL*
Ga0098045_109053543300006922MarineMRDYSITKREGEWYDAKVTDSFGVEHQNYFEHAHEANDWIMYVWEKELPPLTDEEREELLANAIH
Ga0098045_110335613300006922MarineMRDYSITRKEGEWYNAKVTDSFGVNHQNYFEHAHEANDWIMYVWAKELPPLTDAECEELLADAIHDCKQMDAEAGRRAIL*
Ga0098051_116817113300006924MarineMRDYSITKREGEWYDARVVDSYGNKYQNYFEHAHEANDWIMYVWEKELPPLTDEEREELLANAIHDCKQMDERSGRRAIL*
Ga0098050_108805533300006925MarineMRDYSITKREGEWYDAKVTDSFGVEHQNYFEHAHEANDWIMYVWEKELPPLTDEEHEELLANAIHDCKQMDEEAGRRAIL*
Ga0098034_103448563300006927MarineMRDYSITRRKGEWYDAKVTDSFGVEHQNYFEHAHEANDWIMYVWEKELPPLTDEEREELLANAI
Ga0075444_1006584533300006947MarineMRDYSITKNKGEWYNAKVTDSFGVDHQNYYETESECVNWVFYIWEKELPPLTTEEQDELLANAIHDCKQIDIERGIRAIL*
Ga0075444_1024692213300006947MarineMRDYSITKKEGEWYNAKVTDSFGVDHQNYYETESESINWVYYMWEKELPPLTSEEQDELLADAIHD
Ga0098046_111131233300006990MarineMRDYSITRKEGEWYNAKVTDSFGVNHQNYFEHAHEANDWIMYVWAKELPPLTDAECEELLANA
Ga0099849_109050233300007539AqueousMRDYSITRKEGEWYNAKVTDSFGVDHQNYFEHAHEANEWIMYIWESELPPLTDEEREELLANAIHD
Ga0102907_100818393300007962EstuarineMRDYSITRKEGEWYNAKVTDSFGVEHQNYFEHAYEANDWIMYIWEKELPPLTDAECEELLANAIHDCKQMDEEAGRRAIL*
Ga0098052_129527233300008050MarineVRDYSITKRSGEWHSAKVIDSFGVEHQNYYETEQECINWIYHIWEKELPPLTSEERDELLAGAIHDCKQMD
Ga0114916_111013913300008221Deep OceanMSGLCGLGKMTNKMSIRKWSITRLEGEWYNAKVTDSFGESHQNWFENANEANDWIYYVWETEKPPLDQDERDELLANAIHDCRQIDQRRGLRAIL*
Ga0102814_1031172613300009079EstuarineMKGKEMSIRKWSITRKEGEWYNAKVTDSFGESHQNWFENANEANDWIYYVWETERPPLDQDEQDELLANAIHDC
Ga0114997_10052411103300009425MarineMRDYSITRKEGEWYNAKVTDSFGVDHQNYFEHAHEANDWIMYVWAKELPPLTDEEREELLANAIHDCKQIDAESGRRAIL*
Ga0114915_105080513300009428Deep OceanMSIRKWSITRLEGEWYNAKVTDSFGESHQNWFEEANEANDWIYYIWETEKPPLDQEERDELLANAIHDCRQIDHRRGLRAIL*
Ga0114915_114211833300009428Deep OceanMNQRDFSISRKEGEWYNAKVTDSYGVSHQNWFETSNEAHDWVYYMWETEKPPLDQEERDELLANAIHDCRQID
Ga0114915_121695713300009428Deep OceanMRDYSITKNKGEWYNAKVTDSFGVDHQNYYETESECVNWVFYIWEKELPPLTTEEQDELLANAIHDCKQIDIERGIR
Ga0115003_1024908623300009512MarineMRDYSITKKEGEWYNAKVTDSFGVEHQNWFESSFEAYDWVYYIWAKELPPLTTEEQDELLANAIHDCKQIDLERGLRAIL*
Ga0115003_1025855933300009512MarineMCERDFSITRREGEWYNAEVTDSYGEKHQNWFETSNEAHDWIYYMWETEKPPLDQEERDELLANAIHDCRQIDQ
Ga0115001_1049857833300009785MarineMRDYSITKKEGEWYNAKVTDSFGVEHQNWFESSVEAYDWVYYIWAKELPPLTTEEQDELLANAIHDCKQIDLERGLRAIL*
Ga0115001_1062123713300009785MarineMRDYSITKKKGEWYNAKVTDSFGVDHQNYYETESECINWVYWMWEKELPPLTDEEQDELLANAIHDCKQIDRERGLRAIL*
Ga0098061_129637113300010151MarineMRDYSITRKKGEWYDARVVDSYGNKYQNYFEHAHEANDWIAYIWEKELPPLTDEEREELLASAIHDCKQMDK
Ga0098059_114473213300010153MarineMRDYSITRKEGEWYNAKVTDSFGVEHQNYFEHAHEANDWIAYIWEKELPPLTDEEREELLASAIHDCKQMDKRSGRRAIL*
Ga0098059_127005713300010153MarineVRDYSITKKSGEWHNAKVIDSFGVEHQNYYETEQECINWIYHIWERELPPLTSEERDELLAGAIHDCKQMDKESGRRAIL*
Ga0098047_1041949023300010155MarineMRDYSIIKRNGEWYNAKVIDSFGVEHQNYYETEKECINWIYWIWEKELPPLTTEERDELLANAIHE
Ga0133547_1074251663300010883MarineMRDYSITKKEGEWYNAKVTDSFGVEHQNWFESSVEAYDWVYYIWAKELPPLTTEEQDELLANAIHDCRQIDQRRGLRAIL*
Ga0133547_1190351313300010883MarineMRDYSITKKEGEWYNAKVTDSFGVDHQNYYETESECVNWIYWMWEKELPPLTTEEQDELLANAIHDCKQ
Ga0133547_1220427113300010883MarineRFRSNKMRDYSITRKEGEWYNAKVTDSFGVDHQNYYETESECVNWIFYIWEKELPPLTTEEQDELLANAIHDCKQIDLERGLRAIL*
Ga0181370_104721123300017715MarineGNTLNKNINWRYKIMRDYSITRRKGEWYDAKVTDSFGVEHQNYFEHAHEANDWIMYIWEKELPPLTDAEREELLASAIHDCKQMDKRSGRRAIL
Ga0181396_109830523300017729SeawaterMRDYSITRKEGEWYNAKVTDSFGVDHQNYFEHAHEANDWIMYVWAKELPPLTDAEREELLADAIHDCKQMDAEAGRRAIL
Ga0181416_112740313300017731SeawaterMRDYSITRKEGEWYNAKVTDSFGVNHQNYFEHAHEANDWIMYIWEKELPPLTDAECEELLANAIHDCKQMDAEAGRRAIL
Ga0181397_114021713300017744SeawaterMRDYSITRKEGEWYNAKVTDSFGVDHQNYFEHAHEANDWIMYIWAKELPPLTDAECEELLANAIHDCKQMDAEAGRRAIL
Ga0181407_112609813300017753SeawaterMRDYSITRKEGEWYNAKVTDSFGVNHQNYFEHAHEANDWIMYIWEKELPPLTDAECEELL
Ga0181424_1011531843300017786SeawaterMKNKKTNTINMRDYSITRKEGEWYDARVTDSFGVDHQNYFEHAHEANDWIMYVWAKELPPLTDAEREELLADAIHDCKQMDAEAGRRAIL
Ga0196889_106164113300022072AqueousMSERKWSITRKEGEWYNAKVTDSFGESHQNWFENANEANDWIYYVWETERPPLDQEERDELLANAIHDCRQIDQRRGLRAIL
(restricted) Ga0233412_1001612853300023210SeawaterMRDYSITRKEGEWYNAKVTDSFGVEHQNYFEHAYEANDWIMYIWEKELPPLTDAECEELLANAIHDCKQMDEEAGRRAIL
Ga0244776_1064865833300024348EstuarineMRDYSITRKEGEWYNAKVTDSFGVEHQNYFEHAYEANDWIMYIWEKELPPLTDAECEELLANAIHDCK
Ga0208012_1000289113300025066MarineMRDYSITRRKGEWYDAKVTDSFGVEHQNYFEHAHEANDWIMYIWEKELPPLTDAEREELLASAIHDCKQMDKRSGRRAIL
Ga0208793_117767613300025108MarineMRDYSITRRKGEWYDAKVTDSFGVEHQNYFEHAHEANDWIMYIWEKELPPLTDAEREELLASAIH
Ga0208553_113891433300025109MarineMRDYSITRRKGEWYNAKVTDSFGVEHQNYFEHAHEANDWIMYIWEKELPPLTDAEREELLASA
Ga0209634_104038053300025138MarineMSILSERDFSISRKEGEWYNARVTDSYGVKHQNWFETSNEAHDWIYYMWETEKPALDRDEQDELLANAIHDCRQIDQRAGLRAIL
Ga0209756_119331413300025141MarineMRDYSITKREGEWYDAKVTDSFGVEHQNYFEHAHEANDWIMYIWEKELPPLTDEEREELLANAIHDCKQMDER
Ga0209337_121702533300025168MarineMSQRDFSITRREGEWYNAEVTDSFGEKHQNWFETSNEAHDWIYYVWETEKPPLDQEERDELLANAIHDCRQIDQRAGLRAIL
Ga0209337_134176013300025168MarineMNKRDFSITRREGEWYNAEVTDSYGEKHQNWFETSNEAHDFIYYMWETEKPPLDQEERDELLANAIHDCRQIDSRSHIKAIM
Ga0208814_107414013300025276Deep OceanMSIRKWSITRLEGEWYNAKVTDSFGESHQNWFEEANEANDWIYYIWETEKPPLDQEERDELLANAIHDCRQIDHRRGLRAIL
Ga0208814_109312723300025276Deep OceanMNQRDFSISRKEGEWYNAKVTDSYGVSHQNWFETSNEAHDWVYYMWETEKPPLDQEERDELLANAIHDCRQIDQRAGLRAIL
Ga0208643_110007033300025645AqueousMYEMRDYSITRKEGEWYNAKVTDSFGVDHQNYFEHAHEANEWIMYIWESELPPLTDEEREELLANAIHDCKQMDAESGRR
Ga0208809_102064013300027251EstuarineAKVTDSFGVEHQNYFEHAYEANDWIMYIWEKELPPLTDAECEELLANAIHDCKQMDEEAGRRAIL
Ga0209482_122200613300027668MarineMSIRKWSITRIEGEWYNAKVTDSFGESHQNWFEQANEANDWIYYIWETEKPPLTTEEQDELLANAIHD
Ga0209383_105081923300027672MarineMSIRKWSITRIEGEWYNAKVTDSFGESHQNWFEEANEANDWIYYIWETEKPPLDQEERDELLANAIHDCRQIDQRRGLRAIL
Ga0209383_116241913300027672MarineMSIRKWSITKVEGEWYNAKCTDSYGVSHQNWFEHAYDANDWIYYMWETEKPPLDQDEQDELLA
Ga0209816_100673883300027704MarineMSIRKWSITRIEGEWYNAKVTDSFGESHQNWFEQANEANDWIYYIWETEKPPLDQDERDELLANAIHDCRQIDQRRGLRAIL
Ga0209816_105429113300027704MarineMRDYSITKKSGEWHNAKVTDSFGVEHQNYYETEQECINWIYWMWEKELPPLTTEEQDELLANAIHDCKQIDIERGLRAIL
Ga0209816_105957253300027704MarineMRDYSITKNKGEWYNAKVTDSFGVDHQNYYETESECVNWVFYIWEKELPPLTTEEQDELLANAIHDCKQIDIERGIRAIL
Ga0209816_112363223300027704MarineMSIRKWSITKVEGEWYNAKCTDSYGVSHQNWFEHAYDANDWIYYMWETEKPPLDQDEQDELLANAIHDCRQIDQRAGLRAIL
Ga0209816_118942413300027704MarineMRDYSITKKEGEWYNAKVTDSFGVDHQNYYETESESINWVYYMWEKELPPLTSEEQDELLADA
Ga0209815_112386133300027714MarineMRDYSITKKEGEWYNAKVTDSFGVDHQNYYETESESINWVYYMWEKELPPLTSEEQDELLADAIHDCKQIDQLAGFKAIL
Ga0209815_112390413300027714MarineMRDYSITKNKGEWYNAKVTDSFGVDHQNYYETESECVNWVFYIWEKELPPLTTEEQDELLANAIHD
Ga0209815_123042823300027714MarineMRDYSITKKSGEWHNAKVTDSFGVEHQNYYKTEQECINWIYWMWEKELPPLTHEEQDELLANAIHDCKQIDIERGLRAIL
Ga0209711_1020315833300027788MarineMSVRKWSITRKEGEWYNAKVTDSFGESHQNWFEEANEANDWIYYIWETEKPPLDQEERDELLANAIHDCRQIDQ
Ga0209711_1031374123300027788MarineMRDYSITKKEGEWYNAKVTDSFGVEHQNWFESSVEAYDWVYYIWAKELPPLTTEEQDELLANAIHDCRQIDQRRGLRAIL
(restricted) Ga0233415_1052812113300027861SeawaterMRDYSITRKEGEWYNAKVTDSFGVDHQNYFEHAHEANDWIMYIWAKELPPLTDAECEELLANAIHDCKQMDEEA
Ga0256368_102392713300028125Sea-Ice BrineMRDYSITKKEGEWYNAKVTDSFGVDHQNYYETESECVNWIFYMWEKELPPLTTEEQDELLANAL
Ga0256368_105753313300028125Sea-Ice BrineMSVRKWSITRKEGEWYNAKVTDSFGESHQNWFENANEANDWIYYVWETEKPPLDQDEREELLANAP
Ga0256368_108251913300028125Sea-Ice BrineMSVRKWSITRKEGEWYNAKVTDSFGESHQNWFEEANEANDWIYYIWETEKPPLDQEERDELLAN
Ga0308024_102912363300031140MarineMRDYSITKKEGEWYNTKVTDVFGVTHQNYYETESESINWVYYMWEKELPPLTSEEQDELLANAIHDCRQIDIERGLRAIL
Ga0307488_1017355613300031519Sackhole BrineMRDYSITKKEGEWYNAKVTDSFGVDHQNYYETESECVNWIFYMWEKELPPLTTEEQDELLANAIHDCKQIDRERGLRAIL
Ga0307488_1060478733300031519Sackhole BrineMSVRKWSITRREGEWYNAKVTDSFGESHQNWFENANEANDWIYYVWETEKPPLDQEEQDELLANAIHDCRQ
Ga0307488_1062057713300031519Sackhole BrineMSVRKWSITRKEGEWYNAKVTDSFGESHQNWFENANEANDWIYYVWETEKPPLDQDEREELLANAIHDC
Ga0307984_106020843300031658MarineMRDYSITRKEGEWYNAKVTDSFGVDHQNWFESSYESYDWIYHIWANELPPLTPEEQEYLLANAIHDCKQIDIERGLRAIL
Ga0307984_108791513300031658MarineMRDYSITKKEGEWYNTKVTDVFGVTHQNYYETESESINWVYYMWEKELPPLTSEEQDELLANAIHDCRQIDIERGLRA
Ga0307994_119541433300031660MarineKKEGEWYNTKVTDVFGVTHQNYYETESESINWVYYMWEKELPPLTSEEQDELLASAIHDCRQIDIERGLRAIL
Ga0308011_1022764833300031688MarineMSIRKWSITRLEGEWYNAKVTDSFGESHQNWFEEANEANDWIYYIWETEKPPLDQEERDELLANAIHDCRQIDH
Ga0307995_102964043300031696MarineMRDYSITKKEGEWYNTKVTDVFGVTHQNYYETESESINWVYYMWEKELPPLTSEEQDELLASAIHDCRQIDIERGLRAIL
Ga0316202_1036975313300032277Microbial MatYSITRKEGEWYNAKVTDSFGVDHQNYFEHAHEANDWIMYVWAKELPPLTDAECEELLADAIHDCKQMDAEAGRRAIL
Ga0314858_147556_411_6023300033742Sea-Ice BrineMRDYSITRKKGEWYNAKVTDSFGVDHQNYYETESECVNWIFYIWEKELPPLTTEEQDELLANAS
Ga0314858_186494_81_3293300033742Sea-Ice BrineMSVRKWSITRKEGEWYNAKVTDSFGESHQNWFENANEANDWIYYVWETEKPPLDQDEQEELLANAIHDCRQIDQRRGLRAIL


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