NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F103873

Metagenome Family F103873

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103873
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 73 residues
Representative Sequence MATENWSPVYVLEAIATDIATAFETSAFGTVAFGVVSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESWSEISAA
Number of Associated Samples 80
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 52.48 %
% of genes near scaffold ends (potentially truncated) 21.78 %
% of genes from short scaffolds (< 2000 bps) 83.17 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (72.277 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(50.495 % of family members)
Environment Ontology (ENVO) Unclassified
(89.109 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(85.149 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.18%    β-sheet: 12.66%    Coil/Unstructured: 53.16%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF13884Peptidase_S74 11.88
PF00386C1q 1.98
PF00271Helicase_C 0.99
PF01510Amidase_2 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.28 %
All OrganismsrootAll Organisms24.75 %
unclassified Hyphomonasno rankunclassified Hyphomonas2.97 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000949|BBAY94_10204482Not Available531Open in IMG/M
3300000949|BBAY94_10222424Not Available507Open in IMG/M
3300000973|BBAY93_10127626Not Available643Open in IMG/M
3300001721|JGI24528J20060_1004194Not Available989Open in IMG/M
3300001731|JGI24514J20073_1017052Not Available684Open in IMG/M
3300002482|JGI25127J35165_1008092All Organisms → Viruses2723Open in IMG/M
3300002482|JGI25127J35165_1041785All Organisms → Viruses → Predicted Viral1017Open in IMG/M
3300002488|JGI25128J35275_1009640All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.2539Open in IMG/M
3300003475|INDIC_1821263Not Available536Open in IMG/M
3300004951|Ga0068513_1020597Not Available707Open in IMG/M
3300006166|Ga0066836_10251299Not Available1055Open in IMG/M
3300006736|Ga0098033_1045914Not Available1291Open in IMG/M
3300006736|Ga0098033_1117796Not Available751Open in IMG/M
3300006738|Ga0098035_1088256Not Available1090Open in IMG/M
3300006750|Ga0098058_1106219Not Available757Open in IMG/M
3300006751|Ga0098040_1061603All Organisms → Viruses → Predicted Viral1155Open in IMG/M
3300006751|Ga0098040_1078210Not Available1008Open in IMG/M
3300006752|Ga0098048_1231004Not Available542Open in IMG/M
3300006753|Ga0098039_1086149All Organisms → cellular organisms → Bacteria → Proteobacteria1085Open in IMG/M
3300006753|Ga0098039_1086698Not Available1081Open in IMG/M
3300006754|Ga0098044_1088615Not Available1275Open in IMG/M
3300006754|Ga0098044_1233019Not Available717Open in IMG/M
3300006789|Ga0098054_1263151Not Available621Open in IMG/M
3300006790|Ga0098074_1130597Not Available651Open in IMG/M
3300006793|Ga0098055_1215738Not Available726Open in IMG/M
3300006922|Ga0098045_1146288Not Available545Open in IMG/M
3300006923|Ga0098053_1008025All Organisms → cellular organisms → Bacteria → Proteobacteria2482Open in IMG/M
3300006923|Ga0098053_1103976Not Available572Open in IMG/M
3300006927|Ga0098034_1180575Not Available591Open in IMG/M
3300006929|Ga0098036_1202451All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.603Open in IMG/M
3300007276|Ga0070747_1155281Not Available821Open in IMG/M
3300007963|Ga0110931_1171160Not Available651Open in IMG/M
3300008216|Ga0114898_1031158All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1783Open in IMG/M
3300008216|Ga0114898_1068502Not Available1100Open in IMG/M
3300008216|Ga0114898_1127711Not Available743Open in IMG/M
3300008217|Ga0114899_1068329All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1235Open in IMG/M
3300008218|Ga0114904_1056595Not Available1013Open in IMG/M
3300008218|Ga0114904_1074281Not Available853Open in IMG/M
3300008218|Ga0114904_1092601Not Available742Open in IMG/M
3300008219|Ga0114905_1268878Not Available531Open in IMG/M
3300008220|Ga0114910_1014809All Organisms → cellular organisms → Bacteria2829Open in IMG/M
3300009413|Ga0114902_1178366Not Available524Open in IMG/M
3300009481|Ga0114932_10095206Not Available1858Open in IMG/M
3300009593|Ga0115011_10447543Not Available1015Open in IMG/M
3300009604|Ga0114901_1047307All Organisms → Viruses → Predicted Viral1501Open in IMG/M
3300009703|Ga0114933_10261603Not Available1156Open in IMG/M
3300009703|Ga0114933_10294668All Organisms → Viruses → Predicted Viral1077Open in IMG/M
3300010150|Ga0098056_1215677All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.639Open in IMG/M
3300010151|Ga0098061_1309585Not Available542Open in IMG/M
3300010153|Ga0098059_1210697Not Available755Open in IMG/M
3300012919|Ga0160422_10400452Not Available855Open in IMG/M
3300017738|Ga0181428_1074466Not Available792Open in IMG/M
3300017768|Ga0187220_1093911Not Available906Open in IMG/M
3300017775|Ga0181432_1133011Not Available757Open in IMG/M
3300017775|Ga0181432_1166973Not Available681Open in IMG/M
3300017781|Ga0181423_1260648Not Available646Open in IMG/M
3300020403|Ga0211532_10211374Not Available770Open in IMG/M
3300020417|Ga0211528_10355853All Organisms → Viruses543Open in IMG/M
3300020428|Ga0211521_10354712Not Available645Open in IMG/M
3300020473|Ga0211625_10352367Not Available746Open in IMG/M
3300022074|Ga0224906_1055207Not Available1261Open in IMG/M
3300024344|Ga0209992_10099133Not Available1309Open in IMG/M
3300024344|Ga0209992_10370537Not Available571Open in IMG/M
(restricted) 3300024518|Ga0255048_10358284Not Available706Open in IMG/M
(restricted) 3300024520|Ga0255047_10215039Not Available978Open in IMG/M
3300025043|Ga0207907_105111Not Available1314Open in IMG/M
3300025049|Ga0207898_1012521Not Available1052Open in IMG/M
3300025052|Ga0207906_1013306All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1152Open in IMG/M
3300025066|Ga0208012_1001571unclassified Hyphomonas → Hyphomonas sp.5993Open in IMG/M
3300025066|Ga0208012_1006063All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.2371Open in IMG/M
3300025066|Ga0208012_1009968All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1712Open in IMG/M
3300025078|Ga0208668_1047342Not Available803Open in IMG/M
3300025084|Ga0208298_1094453Not Available546Open in IMG/M
3300025098|Ga0208434_1060765Not Available805Open in IMG/M
3300025103|Ga0208013_1154302Not Available546Open in IMG/M
3300025118|Ga0208790_1066305Not Available1103Open in IMG/M
3300025127|Ga0209348_1000349Not Available25320Open in IMG/M
3300025127|Ga0209348_1001731All Organisms → cellular organisms → Bacteria10522Open in IMG/M
3300025127|Ga0209348_1063060Not Available1217Open in IMG/M
3300025128|Ga0208919_1128977Not Available797Open in IMG/M
3300025132|Ga0209232_1001549Not Available12294Open in IMG/M
3300025133|Ga0208299_1002194unclassified Hyphomonas → Hyphomonas sp.13472Open in IMG/M
3300025133|Ga0208299_1016351All Organisms → cellular organisms → Bacteria3419Open in IMG/M
3300025151|Ga0209645_1001736unclassified Hyphomonas → Hyphomonas sp.10716Open in IMG/M
3300025267|Ga0208179_1064337Not Available789Open in IMG/M
3300025270|Ga0208813_1023642Not Available1510Open in IMG/M
3300025274|Ga0208183_1059404Not Available750Open in IMG/M
3300025293|Ga0208934_1023826All Organisms → cellular organisms → Bacteria → Proteobacteria1228Open in IMG/M
3300025301|Ga0208450_1005790Not Available4511Open in IMG/M
3300025305|Ga0208684_1055852All Organisms → cellular organisms → Bacteria → Proteobacteria1070Open in IMG/M
3300027906|Ga0209404_10210898Not Available1209Open in IMG/M
3300029319|Ga0183748_1014754All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae3015Open in IMG/M
3300029448|Ga0183755_1004534Not Available6643Open in IMG/M
3300029448|Ga0183755_1016250All Organisms → Viruses → Predicted Viral2633Open in IMG/M
3300029787|Ga0183757_1005135All Organisms → Viruses4397Open in IMG/M
3300029787|Ga0183757_1020935Not Available1558Open in IMG/M
3300031775|Ga0315326_10789065Not Available592Open in IMG/M
3300031785|Ga0310343_10860193All Organisms → Viruses683Open in IMG/M
3300032032|Ga0315327_10186994Not Available1298Open in IMG/M
3300032073|Ga0315315_11317391Not Available634Open in IMG/M
3300032360|Ga0315334_10738628Not Available852Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine50.50%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean16.83%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine8.91%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.94%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface4.95%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater3.96%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface2.97%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.98%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.99%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.99%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.99%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.99%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300000973Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93Host-AssociatedOpen in IMG/M
3300001721Marine viral communities from the Pacific Ocean - LP-54EnvironmentalOpen in IMG/M
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300003475Marine microbial communities from the Indian Ocean - GS112EnvironmentalOpen in IMG/M
3300004951Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVsEnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006790Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020417Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020473Marine microbial communities from Tara Oceans - TARA_B100000700 (ERX555932-ERR598948)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025043Marine viral communities from the Subarctic Pacific Ocean - LP-52 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025274Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)EnvironmentalOpen in IMG/M
3300025293Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
BBAY94_1020448233300000949Macroalgal SurfaceMATESWSPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGREFWADISASANAESWSSISASSNTESW
BBAY94_1022242423300000949Macroalgal SurfaceMATENWGPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA*
BBAY93_1012762613300000973Macroalgal SurfaceMATENWSPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGREFWSDISASANA
JGI24528J20060_100419423300001721MarineMATENWSPVYVLENIDTDISQEFETSAFGTVAFGVVSFGGTPDVGKEVWSAISATGTAESWSAISATGTSESWSEISAA*
JGI24514J20073_101705223300001731MarineMATENWSPVYVLENLATDIATAFETSAFGTVAFGVVSFGGTPDVGKEVWSAISAAGTAESWSAISATGTGESWSEISAA*
JGI25127J35165_100809213300002482MarineMATENWSPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWSDISASANTESWSEISAA*
JGI25127J35165_104178523300002482MarineMATENWSPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWADISASANTESWSEISAA*
JGI25128J35275_100964023300002488MarineMATENWSPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA*
INDIC_182126313300003475MarineMATEVWSPVFVLEAISTDIAGTFETSGFGMVAFGVSSFGGTPDVGREMWSAISTTSATESWSAISTTTATESWSEISTA*
Ga0068513_102059723300004951Marine WaterMATENWSPVFVLETIGTDIATEFETSAFGAVAFGVVSFGGSPDVGREFWADISASANTESWSEISAA*
Ga0066836_1025129923300006166MarineMATELWSPVYILEAIGTDIAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSATESWSAISATGTTESWSEVSTA*
Ga0098033_104591443300006736MarineMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDVGKELWSAVSAAGTAESWSAISSTGTAESWSEISAA*
Ga0098033_111779623300006736MarineMATENWSPVYVLEAIATDIATAFETSAFGTVAFGVVSFGGSPDVGPEVWSAISTTGTAESWSAISATGTGESWSEISAA*
Ga0098035_108825633300006738MarineMATEYWSPIFVLEAISTDIHNVHESSAFGTVAFGVLSFGGSPDIGKEAWSAISAAGTAESWSAISATGTAESWSEISAA*
Ga0098058_110621933300006750MarineMATENWSPVYVLEALSTDIQQEFESSAFGTVAFGVLSFGGSPDIGKELWSAVSASGTAESWSAISSTGTAESWSEISAA*
Ga0098040_106160343300006751MarineMATENWSPIYVLEAISTDIQQEFESSAFGTVAFGVLSFGGSPDIGKELWSAVSASGTAESWSAISSTGTAESWSEISAA*
Ga0098040_107821033300006751MarineMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDIGKEAWSAISAAGTAESWSAISATGTAESWSEISAA*
Ga0098048_123100423300006752MarineMATENWSPIYVLEAISTDIQQEFESSAFGTVAFGVLSFGGSPDIGKEIWSAVSASGTAESWSAISSTGTAESWSEISAA*
Ga0098039_108614913300006753MarineISTDIQNVHESSAFGTVAFGVLSFGGSPDIGKEVWSAVSAAGTAESWSGISATGTAESWSEISAA*
Ga0098039_108669833300006753MarineMATENWSPVYVLEAIATDIATAFETSAFGTVAFGVVSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESWSEISAA*
Ga0098044_108861533300006754MarineMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDIGKETWSAISAAGTAESWSAISATGTAESWSEISAA*
Ga0098044_123301923300006754MarineMATEVWSPVFVLEAISTDIAGTFETSGFGMVAFGVSSFGGTPDIGREFWSAISATGTAESWSEISAA*
Ga0098054_126315113300006789MarineMATEYWSPIFVLEAISTDIHNVHESSAFGTVAFGVLSFGGSPDIGKETWSAISAAGTAESWSAISATGTAESWSEISAA*
Ga0098074_113059723300006790MarineMATENWSPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGREFWADISASANTESWSEISAA*
Ga0098055_121573833300006793MarineMATENWSPIYVLEAIATDIATAFETSAFGTVAFGVVSFGGSPDVGPEVWSAISTTGTAESWSAISATGTGESWSEVSTT*
Ga0098045_114628823300006922MarineMATENWSPVYVLEALSTDIQQEFESSAFGTVAFGVLSFGGSPDIGKELWSAVSASGTAESWSAISSTGTAESWSEVSTA*
Ga0098053_100802533300006923MarineMATENWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESWSEISAA*
Ga0098053_110397633300006923MarineMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDIGKEAWSAISAAGTAESWSAISATGTAESWSEVSTT*
Ga0098034_118057523300006927MarineMATENWSPVYVLEALSTDIQQEFESSAFGTVAFGVLSFGGSPDIGKEAWSAISAAGTAESWSAISSTGTAESWSEISAA*
Ga0098036_120245133300006929MarineMATELWSPVYILEAISTDVAGTFETSGFGMVAFGVSSFGGTPDVGREFWSTISTSSTTESWSAISATGTGESWSEVSTA*
Ga0070747_115528123300007276AqueousMATENWSPVLVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGREVWADISASANTESWSEISAA*
Ga0110931_117116023300007963MarineMATENWGPVFVLEAIGTDIATQFETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA*
Ga0114898_103115823300008216Deep OceanMATENWSPVYVLEAIDTDISTAFETSAFGVVAFGVVSFGGSPDVGREPWSAVSAAGTAESWSAISATGTAESWSEISAA*
Ga0114898_106850223300008216Deep OceanMATEYWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESWSEISAA*
Ga0114898_112771133300008216Deep OceanMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISA
Ga0114899_106832933300008217Deep OceanMATELWSPVYILEAISTDVAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSTTESWSAISATGTGESWSEVSTA*
Ga0114904_105659543300008218Deep OceanMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDIGKESWSAISAAGTAESWSAISATGTAESWSEISAA*
Ga0114904_107428123300008218Deep OceanMATEYWSPIYVLEALSTDIATKYESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESWSEISAA*
Ga0114904_109260123300008218Deep OceanMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDIGKESWSAISAAGTAESWSAISATGTGESWSEISAA*
Ga0114905_126887813300008219Deep OceanTENWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESWSEISAA*
Ga0114910_101480913300008220Deep OceanMATENWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDIGKESWSAISAAGTAESWSAISATGTGESWSEISAA*
Ga0114902_117836623300009413Deep OceanMATENWSPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGREFWADISASANTESWSEINAA*
Ga0114932_1009520643300009481Deep SubsurfaceMATENWGPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWSDISASANTESWSEISAA*
Ga0115011_1044754333300009593MarineMATELWSPVYILEAIGTDIAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSATESWSAINATGTTESWSEVSTA*
Ga0114901_104730743300009604Deep OceanMATENWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESW
Ga0114933_1026160313300009703Deep SubsurfacePVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWSDISASANTESWSEISAA
Ga0114933_1029466843300009703Deep SubsurfaceMATENWGPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWSDISASTNAESWSEISAA*
Ga0098056_121567713300010150MarineMATENWSPVYVLEAIDTDISTAFETSAFGVVAFGVVSFGGSPDVGREPWSAVSAAGTAESWSAISSTGTAESWSEISAA*
Ga0098061_130958523300010151MarineMATELWSPVYILEAIGTDIAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSTTESWSAISATGTTESWSEVSTA*
Ga0098059_121069723300010153MarineMATEYWSPIFVLEEISTDIHNVHESSAFGTVAFGVLSFGGSPDIGKEVWSAVSAAGTAESWSGISATGTAESWSEISAA*
Ga0160422_1040045233300012919SeawaterMATENWSPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGNEFWADISASANTESWSEISAA*
Ga0181428_107446613300017738SeawaterIATQFETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA
Ga0187220_109391133300017768SeawaterMATEGWGPVFVLEAIGTDIATQFETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA
Ga0181432_113301123300017775SeawaterMATEYWSPIFVLEAVSTDIQGLYESSAFGTVAFGVLSFGGTPDVGKELWSAISSTGTAESWSAISATGTAESWSEVSTA
Ga0181432_116697313300017775SeawaterMATENWSPVYVLEAIATDISQEFETSAFGTVAFGVVSFGGTPDVGKELWSAISATGTAESWSAISATGTGESWSEISAA
Ga0181423_126064823300017781SeawaterMATEGWGPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGRKFWSDISASANAESWSEISAA
Ga0211532_1021137423300020403MarineMATENWSPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGNEFWADISASANTESWSEISAA
Ga0211528_1035585333300020417MarineMATENWSPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGREFWADISASANTESWSE
Ga0211521_1035471223300020428MarineMATENWGPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA
Ga0211625_1035236713300020473MarineMATENWSPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWVDISASANTESWSE
Ga0224906_105520723300022074SeawaterMATEGWGPVFVLEAISTDIATQFETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA
Ga0209992_1009913333300024344Deep SubsurfaceMATENWGPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWSDISASANTESWSEISAA
Ga0209992_1037053733300024344Deep SubsurfaceMATELWSPVYILEAISTDVAGTFETSGFGMVAFGVSSFGGTPDIGREFWSAISTS
(restricted) Ga0255048_1035828413300024518SeawaterMATEYWSPIYVLEALSTDIQQEFESSAFGTVAFGVLSFGGSPDIGKELWSAISSTGTAESWSAISSTGTAESWSEISAA
(restricted) Ga0255047_1021503913300024520SeawaterMATENWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDIGKEAWSAISAAGTAESWSAISATGTGESWSEISAA
Ga0207907_10511143300025043MarineMATENWSPVYVLENLATDIATAFETSAFGTVAFGVVSFGGTPDVGKEVWSAISATGTAESWSAISATGTGESWSEISAA
Ga0207898_101252113300025049MarineMATENWSPVYVLEAIATDIATAFETSAFGTVAFGVVSFGGTPDVGKEVWSAISATGTAESWSAISATGTGESWSEISAA
Ga0207906_101330643300025052MarineMATENWSPVYVLENLATDIATAFETSAFGTVAFGVVSFGGTPDVGKEVWSAISAAGTAESWSAISATGTGESWSEISAA
Ga0208012_100157183300025066MarineMATELWSPVYILEAIGTDIAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSATESWSAISATGTTESWSEVSTA
Ga0208012_100606343300025066MarineMATEVWSPVFVLEAISTDIAGTFETSGFGMVAFGVSSFGGTPDIGREFWSAISATGTAESWSEI
Ga0208012_100996843300025066MarineMATENWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAES
Ga0208668_104734223300025078MarineMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDIGKEAWSAISAAGTAESWSAISATGTAESWSEISAA
Ga0208298_109445323300025084MarineMATENWSPIYVLEAISTDIQQEFESSAFGTVAFGVLSFGGSPDIGKELWSAVSASGTAESWSAISSTGTAESWSEISAA
Ga0208434_106076523300025098MarineMATENWSPIYVLEAISTDIQQEFESSAFGTVAFGVLSFGGSPDIGKEIWSAVSASGTAESWSAISSTGTAESWSEISAA
Ga0208013_115430223300025103MarineMATEYWSPIFVLEAISTDIHNVHESSAFGTVAFGVLSFGGSPDIGKETWSAISAAGTAESWSAISATGTAESWSEISAA
Ga0208790_106630533300025118MarineMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDIGKETWSAISAAGTAESWSAISATGTAESWSEISAA
Ga0209348_1000349103300025127MarineMATENWSPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWSDISASANTESWSEISAA
Ga0209348_100173113300025127MarineMATESWSPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWADISASANVESWSSISAS
Ga0209348_106306033300025127MarineMATENWSPVFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA
Ga0208919_112897723300025128MarineMATENWSPVYVLEAIDTDISTAFETSAFGVVAFGVVSFGGSPDVGREPWSAVSAAGTAESWSAISSTGTAESWSEISAA
Ga0209232_100154993300025132MarineMATELWSPVYILEAISTDVAGTFETSGFGMVAFGVSSFGGTPDIGREFWSAISTSSTTESWSAISATGTGESWSEVSTA
Ga0208299_100219443300025133MarineMATELWSPVYILEAIGTDIAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSATESWSAISATGTTESWSEVSTT
Ga0208299_101635153300025133MarineMATENWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESWSEISAA
Ga0209645_1001736103300025151MarineFVLEAIGTDIATEFETSAFGAVAFGVVSFGGSPDVGNEFWADISASANTESWSEISAA
Ga0208179_106433723300025267Deep OceanMATENWGPVFVLEAIGTDIATQFETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA
Ga0208813_102364223300025270Deep OceanMATEYWSPIFVLEAISTDIQNVHESSAFGTVAFGVLSFGGSPDIGKESWSAISAAGTAESWSAISATGTAESWSEISAA
Ga0208183_105940413300025274Deep OceanMATEYWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISATGTAESWSEVSTA
Ga0208934_102382613300025293Deep OceanDIATQFETSAFGAVAFGVVSFGGSPDVGREFWSDISASANAESWSEISAA
Ga0208450_100579073300025301Deep OceanMATEYWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESWSEISAA
Ga0208684_105585233300025305Deep OceanTENWSPIFVLEAISTDIQGLHESSAFGTVAFGVLSFGGSPDVGKELWSAISSTGTAESWSAISATGTGESWSEISAA
Ga0209404_1021089823300027906MarineMATELWSPVYILEAIGTDIAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSATESWSAINATGTTESWSEVSTA
Ga0183748_101475463300029319MarineMATENWSPVFVLEVIGTDIATEFETSAFGAVAFGVVSFGGSPDVGNEFWADISASANTESWSEISAA
Ga0183755_100453473300029448MarineMATENWSPVYVLEAIDTDISTAFETSAFGVVAFGVVSFGGSPDVGREPWSAVSAAGTAESWSAISATGTAESWSEISAA
Ga0183755_101625023300029448MarineMATELWSPVYILEAISTDVAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSTTESWSAISATGTGESWSEVSTA
Ga0183757_100513583300029787MarineMATENWSPVFVLEAIGTDIPTEIETSAFGAVAFGVVSFGGSPDVGREFWADISASANTESWSE
Ga0183757_102093533300029787MarineIPTEIETSAFGAVAFGVVSFGGSPDVGREFWSDISASANTESWSEISAA
Ga0315326_1078906523300031775SeawaterMATELWSPVYILEAIGTDIAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSATESWSAISATGTAESWSEVSTA
Ga0310343_1086019313300031785SeawaterMATESWSPVFVLEAIGTDIATEIETSAFGAVAFGVVSFGGSPDVGREFWADISASANAESWSSISASSN
Ga0315327_1018699433300032032SeawaterMATELWSPVYILEAIGTDIAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAISTSSTTESWSAISATGTTESWSEVSTA
Ga0315315_1131739133300032073SeawaterMATELWSPVYILEAIGTDIAGTFETSGFGMVAFGVSSFGGTPDVGREFWSAVSASGTAESWSAISSTGTAESWSEIS
Ga0315334_1073862823300032360SeawaterMATEYWSPIFVLEAISTDIQGLYESSAFGTVAFGVLSFGGTPDVGKELWSAISSTGTAESWSAISATGTAESWSEVSTA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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