Basic Information | |
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Family ID | F103862 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 101 |
Average Sequence Length | 139 residues |
Representative Sequence | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPR |
Number of Associated Samples | 89 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 76.27 % |
% of genes near scaffold ends (potentially truncated) | 58.42 % |
% of genes from short scaffolds (< 2000 bps) | 47.52 % |
Associated GOLD sequencing projects | 74 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (65.347 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.881 % of family members) |
Environment Ontology (ENVO) | Unclassified (56.436 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (85.149 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 56.49% β-sheet: 0.00% Coil/Unstructured: 43.51% | Feature Viewer |
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Pfam ID | Name | % Frequency in 101 Family Scaffolds |
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PF08281 | Sigma70_r4_2 | 39.60 |
PF00069 | Pkinase | 6.93 |
PF08327 | AHSA1 | 1.98 |
PF12840 | HTH_20 | 1.98 |
COG ID | Name | Functional Category | % Frequency in 101 Family Scaffolds |
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COG0515 | Serine/threonine protein kinase | Signal transduction mechanisms [T] | 27.72 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 65.35 % |
All Organisms | root | All Organisms | 34.65 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000550|F24TB_12546102 | All Organisms → cellular organisms → Bacteria | 696 | Open in IMG/M |
3300004463|Ga0063356_101308266 | Not Available | 1061 | Open in IMG/M |
3300004643|Ga0062591_100840342 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 853 | Open in IMG/M |
3300005328|Ga0070676_10696447 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 741 | Open in IMG/M |
3300005334|Ga0068869_100355779 | Not Available | 1194 | Open in IMG/M |
3300005335|Ga0070666_10326170 | Not Available | 1096 | Open in IMG/M |
3300005343|Ga0070687_100019833 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 3136 | Open in IMG/M |
3300005344|Ga0070661_100009287 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 6801 | Open in IMG/M |
3300005356|Ga0070674_100375204 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1156 | Open in IMG/M |
3300005366|Ga0070659_100375058 | Not Available | 1197 | Open in IMG/M |
3300005441|Ga0070700_100249399 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 1273 | Open in IMG/M |
3300005444|Ga0070694_100184134 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 1546 | Open in IMG/M |
3300005466|Ga0070685_10040041 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 2665 | Open in IMG/M |
3300005535|Ga0070684_100023527 | All Organisms → cellular organisms → Bacteria | 5155 | Open in IMG/M |
3300005539|Ga0068853_100360238 | Not Available | 1354 | Open in IMG/M |
3300005545|Ga0070695_100186102 | Not Available | 1475 | Open in IMG/M |
3300005548|Ga0070665_100129472 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 2526 | Open in IMG/M |
3300005563|Ga0068855_100178057 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 2405 | Open in IMG/M |
3300005564|Ga0070664_101378005 | Not Available | 666 | Open in IMG/M |
3300005564|Ga0070664_102089563 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 537 | Open in IMG/M |
3300005577|Ga0068857_102026309 | Not Available | 564 | Open in IMG/M |
3300006175|Ga0070712_100235828 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 1455 | Open in IMG/M |
3300006845|Ga0075421_100853015 | All Organisms → cellular organisms → Bacteria | 1044 | Open in IMG/M |
3300006847|Ga0075431_101202826 | Not Available | 720 | Open in IMG/M |
3300006852|Ga0075433_11539669 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 574 | Open in IMG/M |
3300006854|Ga0075425_101443266 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 778 | Open in IMG/M |
3300006871|Ga0075434_100728528 | Not Available | 1009 | Open in IMG/M |
3300006880|Ga0075429_100521842 | Not Available | 1041 | Open in IMG/M |
3300007076|Ga0075435_100601038 | Not Available | 954 | Open in IMG/M |
3300009093|Ga0105240_10904563 | Not Available | 949 | Open in IMG/M |
3300009156|Ga0111538_13138008 | Not Available | 576 | Open in IMG/M |
3300009177|Ga0105248_10065264 | All Organisms → cellular organisms → Bacteria | 4087 | Open in IMG/M |
3300009177|Ga0105248_10570026 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium | 1277 | Open in IMG/M |
3300009553|Ga0105249_13167797 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 529 | Open in IMG/M |
3300010373|Ga0134128_11587852 | Not Available | 720 | Open in IMG/M |
3300010375|Ga0105239_12599602 | Not Available | 590 | Open in IMG/M |
3300012897|Ga0157285_10167097 | Not Available | 667 | Open in IMG/M |
3300013102|Ga0157371_10013850 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae | 6109 | Open in IMG/M |
3300013306|Ga0163162_12394975 | Not Available | 607 | Open in IMG/M |
3300013306|Ga0163162_13343609 | Not Available | 513 | Open in IMG/M |
3300013308|Ga0157375_10701111 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 1166 | Open in IMG/M |
3300013308|Ga0157375_13318375 | Not Available | 536 | Open in IMG/M |
3300015372|Ga0132256_100667324 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium | 1155 | Open in IMG/M |
3300015372|Ga0132256_102026649 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 682 | Open in IMG/M |
3300025321|Ga0207656_10253838 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 862 | Open in IMG/M |
3300025903|Ga0207680_10381739 | Not Available | 993 | Open in IMG/M |
3300025907|Ga0207645_10000142 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 55713 | Open in IMG/M |
3300025919|Ga0207657_10488993 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 964 | Open in IMG/M |
3300025925|Ga0207650_10182818 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 1671 | Open in IMG/M |
3300025944|Ga0207661_10685691 | Not Available | 942 | Open in IMG/M |
3300025949|Ga0207667_10673468 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes | 1038 | Open in IMG/M |
3300025961|Ga0207712_10064099 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae | 2619 | Open in IMG/M |
3300025972|Ga0207668_10088748 | Not Available | 2265 | Open in IMG/M |
3300026121|Ga0207683_10517297 | All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR33 | 1103 | Open in IMG/M |
3300027907|Ga0207428_10298816 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 1192 | Open in IMG/M |
3300031892|Ga0310893_10139074 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 933 | Open in IMG/M |
3300031908|Ga0310900_10682501 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 820 | Open in IMG/M |
3300034660|Ga0314781_077291 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 638 | Open in IMG/M |
3300034678|Ga0314803_033534 | Not Available | 826 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 11.88% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 9.90% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 7.92% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 6.93% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.94% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.94% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 4.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 4.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.96% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 3.96% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.98% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.98% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.98% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.98% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.98% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.99% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.99% |
Termite Nest | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest | 0.99% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.99% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.99% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.99% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.99% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.99% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.99% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2140918013 | Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies) | Environmental | Open in IMG/M |
3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000550 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly | Environmental | Open in IMG/M |
3300002070 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 | Host-Associated | Open in IMG/M |
3300002128 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Host-Associated | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300006169 | Termite nest microbial communities from Madurai, India | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300028889 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2 | Environmental | Open in IMG/M |
3300031892 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2 | Environmental | Open in IMG/M |
3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
3300031913 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4 | Environmental | Open in IMG/M |
3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
3300034660 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034676 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034678 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Iowa-Corn-GraphCirc_02107000 | 2140918013 | Soil | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAXXXXXXX |
ICChiseqgaiiDRAFT_04987282 | 3300000033 | Soil | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIA |
F24TB_125461022 | 3300000550 | Soil | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIHDPTPDPVPIRRPRWLTAGAPLAAAAALLIAVLPRVQTNLANAAFAMRAESIAQPLTGRPQLAMA |
JGI24750J21931_10677021 | 3300002070 | Corn, Switchgrass And Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAAD |
JGI24036J26619_101229982 | 3300002128 | Corn, Switchgrass And Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRR |
Ga0063356_1013082661 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLDAEATIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRL |
Ga0062591_1008403421 | 3300004643 | Soil | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDAT |
Ga0070676_106964471 | 3300005328 | Miscanthus Rhizosphere | PDVRAAAARNRAANITERPMAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMTLRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYGELRKRINTGGSISSIKAAAVTADEHLHDFLDS |
Ga0070683_1003370113 | 3300005329 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVPVRRPRWLTADAPLAAAAALLIAVLPRVLSNPAATFAMRAESIAQPLTDR |
Ga0068869_1003557791 | 3300005334 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGAR |
Ga0070666_103261702 | 3300005335 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARAT |
Ga0070682_1004589252 | 3300005337 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRV |
Ga0070687_1000198333 | 3300005343 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSAT |
Ga0070661_1000092879 | 3300005344 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVTEMVELLDSVTLSDATRAEYGELRHRITTGDSISSIKAAAVTADEHLHDFLESRWYGTGKWLAAGELAARAHS |
Ga0070692_105717472 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESI |
Ga0070674_1003752042 | 3300005356 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEAAFEIYADAVRARDDLNADAIIPLPVRPPVAMHRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFAMGAESITRPLTSRPQLAVALRSALDEPRWSATRGGVSTFVDSTAALRLG |
Ga0070659_1003750582 | 3300005366 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGA |
Ga0070700_1002493992 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIA |
Ga0070700_1012193572 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MAAINEFDPDLVAAFIDGRLSGADRERVVMLLAQSEAAFEIYADAVRARDDLGADAIIPLPARRSVPVRRPRWLTAGAPLAAAA |
Ga0070694_1001841343 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGAR |
Ga0070678_1006352441 | 3300005456 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGPDRDRVVKLLAESEEAFEIYADAVRAREDLDADAIIPIPARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAAMTFAMRA |
Ga0070685_100400411 | 3300005466 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYGELRKRINTGGS |
Ga0070684_1000235275 | 3300005535 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVLRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGA |
Ga0070684_1004904032 | 3300005535 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFAMR |
Ga0068853_1003602381 | 3300005539 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALR |
Ga0070695_1001861021 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAM |
Ga0070665_1001294721 | 3300005548 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPR |
Ga0068855_1001780571 | 3300005563 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEP |
Ga0070664_1013780051 | 3300005564 | Corn Rhizosphere | ISEEGPDVRAAAARNRAANITERPMAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYGEL |
Ga0070664_1020895631 | 3300005564 | Corn Rhizosphere | ISEEGPDVRAAAARNRAANITERPMAATDEFDPDLVAAFMDGKLSGADRERVLRLLADSEEAFEIYADAVRARADLDADAIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVESNLANAVFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSATRGGPSTFVD |
Ga0068857_1020263091 | 3300005577 | Corn Rhizosphere | ISEEGPDVRAAAARNRAANITERPMAATDEFDPDLVAAFMDGKLSGADRERVLRLLADSEEAFEIYADAVRARADLDADAIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVESNLANAVFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGA |
Ga0068856_1019736202 | 3300005614 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPAVPVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATLAMRAES |
Ga0068852_1022549142 | 3300005616 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFAMRAESI |
Ga0068864_1001066193 | 3300005618 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFAMRAESIAQPLTDR |
Ga0068851_101842212 | 3300005834 | Corn Rhizosphere | MAATDEFDPDLLAAFIDGRLSGAERERVVKLLAESEAAFEVYADAVRARDDLDADAIIPIPVRPPVTVRRPRWLTTGAPLAAAAALLIAVLPRVVSNPAATFAMRAESIAQPLTDR |
Ga0068851_108573832 | 3300005834 | Corn Rhizosphere | MAAINEFDPDLVAAFIDGRLSGADRERVVMLLAQSEAAFEIYADAVRARDDLGADAIIPLPARRSVPVRRPRWLTAGAPLAAAAALLIAVL |
Ga0068863_1022500301 | 3300005841 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVSVRRPRWLTAGAPLAAAAALLI |
Ga0082029_12356091 | 3300006169 | Termite Nest | MAEFDESDVELVAAFIDGKLSGAERDRVVRLLAESEAAFEVYADALRARADLDEPAVVPIPVRRPEARLRPRWLTAGVPLAAAAALLIAVFPAVQSR |
Ga0070712_1002358282 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MAAINEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARDDLDADAIVPIPVRRSVPIRRPRWLTAGAPLAAAAALLIAVLPRVMSNPTATFAMRAESIAQPLTERPQLAVSLRSGLDEPRWSATRGGVSTF |
Ga0075421_1008530151 | 3300006845 | Populus Rhizosphere | MAAIDDFDPDLVAAFIDGRLSGAARDRVVRLLAESEAAFEIYADALRAHAELNRDAPVPFPAPRHEPSPRPRWLTAGVPLAAAAALLIAVLPTVQSKRANAMFAMRADVIAGPLTGQPQLVNALRSALDEPRLSVTRGGGSTFVDSAAALRLGIRATELQVALGVDDRERALRTATEIVALL |
Ga0075431_1012028262 | 3300006847 | Populus Rhizosphere | MAAIDDFDPDLVAAFIDGRLSGAARDRVVRLLAESEAAFEIYADALRAHAELNRDAPVPFPAPRHEPSPRPRWLTAGVPLAAAAALLIAVLPTVQSKRANAMFAMRADVIAGPLTGQPQLVNALRSA |
Ga0075431_1018983642 | 3300006847 | Populus Rhizosphere | MAEFDEFDPDLVAAFIDGRLAGAERERVLRLLTESEEAFEIYADALRARGELDAGAVVPFPAPKPISRPRPRWWTAGVPLAAAAALLIAVFPAVQSRRANAALEMSAESIAQPLTGGPQ |
Ga0075433_115396691 | 3300006852 | Populus Rhizosphere | FDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYGEL |
Ga0075425_1014432661 | 3300006854 | Populus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGAERERVVRLLAESEEAFEIYADAVRARADLQADGIVPFPTPVPIPRPRPRWLTAGAPLAAAAALLIAVLPRVVSNPAATFAMGAESIARPLTDRPQLATSLRS |
Ga0075425_1019173421 | 3300006854 | Populus Rhizosphere | MAAIDDFDPDLVAAFIDGRLSGAARDRVVRLLAESEAAFEIYADALRAHAELNRDAPVPFPAPRHEPSPRPRWLTAGVPLAAAAALLI |
Ga0075434_1007285281 | 3300006871 | Populus Rhizosphere | MAAIDDFDPDLVAAFIDGRLSGAERDRVVRLLAESEAAFEIYADALRAHAELNRDAPVPFPAPRHEPSPRPRWLTAGVPLAAAAALLIAVLPTVQSRRANATFEMSAERIAQPLTGQPQLASALRSALDEPRWSVTRGGGSTFVDSTAALRLGVRATDLRVALAVGD |
Ga0075429_1005218422 | 3300006880 | Populus Rhizosphere | MAAIDDFDPDLVAAFIDGRLSGAARDRVVRLLAESEAAFEIYADALRAHAELNRDAPVPFPAPRHEPSPRPRWLTAGVPLAAAAALLIAVLPTVQSKRANAMFAMRADVIAGPLTGQPQLVNALRSALDEPR |
Ga0075419_104787362 | 3300006969 | Populus Rhizosphere | MAAIDDFDPDLVAAFIDGRLSGAERERVLRLLTESEEAFEIYADALRARGELDAGAVVPFRAPKPISRPRPRWWTAGVPLAAAAALLIAVFPAVQSRRANAALEMSA |
Ga0075435_1006010382 | 3300007076 | Populus Rhizosphere | MAAIDDFDPDLVAAFIDGRLSGAARDRVVRLLAESEAAFEIYADALRAHAELNRDAPVPFPAPRHEPSPRPRWLTAGVPLAAAAALLIAVLPTVQSKRANAMFAMRADVIAGPLTGQPQLVNALRSALDEPRLSVTRGGGSTFV |
Ga0105240_109045632 | 3300009093 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRPGLDEPRWSATRGGPS |
Ga0111538_131380081 | 3300009156 | Populus Rhizosphere | MAAIDDFDPDLVAAFINGRLSGAARDRVVRLLAESEAAFEIYADALRAHAELNRDAPVPFPAPRHEPSPRPRWLTAGVPLAAAAALLIAVLPTVQSKRANAMFAMRADVIAGPLTGQPQLVNALRSALDEPRLSVTRGGGST |
Ga0105242_131582061 | 3300009176 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEAAFEIYADAVRARDDLNADAIIPLPVRPPVAMHRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFAMGAESITRPLT |
Ga0105248_100652641 | 3300009177 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYG |
Ga0105248_105700261 | 3300009177 | Switchgrass Rhizosphere | MAAINEFDPDLVAAFIDGRLSGADRERVVMLLAQSEAAFEIYADAVRARDDLGADAIIPLPARRSVPVRRPRWLTAGAPLAAAAALLIALLPRVLSSPAATLAMPAESITQPLTDRPQLAVALRSGLDEPRWSATRGGV |
Ga0105249_131677971 | 3300009553 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGA |
Ga0134128_115878521 | 3300010373 | Terrestrial Soil | MAAINEFDPDLVAAFIDGRLSGADRERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAAMTFAMRAESIAQPLRDRPQLVVALRSGLDEPRWSATRGGVSAFADSTAALRLGTRATD |
Ga0105239_125996021 | 3300010375 | Corn Rhizosphere | DPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNLTNAAFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYGELRKRIN |
Ga0105239_134198682 | 3300010375 | Corn Rhizosphere | MAAINEFDPDLVAAFIDGRLSGADRERVVMLLAQSEAAFEIYADAVRARDDLGADAIIPLPARRSVPVRRPRWLTAGAPLAAAAALLIAVLPRVLSSPAATLA |
Ga0105246_106060852 | 3300011119 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGVDRERVLRLLADSEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRSRWLTAGAPLAAAAALLIAVLPRVES |
Ga0150985_1074978461 | 3300012212 | Avena Fatua Rhizosphere | MAAINEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARDDLRADAIIPLPARPSVPVRRPRWLTAGAPLAAAAALLIAVLPRVLSSPAATFAMPAESITRPLTDRPQ |
Ga0157285_101670971 | 3300012897 | Soil | AESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRTDAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVTEMVELLDSVTLSDATRAEYGELRHRITTGDSISSIKAAAATADEHLHDFLDSRWYGTGKWLAASELAARAHSADFFKS |
Ga0157371_100138508 | 3300013102 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDL |
Ga0157374_122782142 | 3300013296 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFAMRAESIAQPL |
Ga0163162_123949751 | 3300013306 | Switchgrass Rhizosphere | ANITERPMAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYG |
Ga0163162_133436091 | 3300013306 | Switchgrass Rhizosphere | ANITERPMAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGA |
Ga0157372_118232732 | 3300013307 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAE |
Ga0157375_107011112 | 3300013308 | Miscanthus Rhizosphere | MAAINEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARDDLGADAIIPLPARRSVPVRRPRWLTAGAPLAAAAALLIAVLPRVLSSPAATLAMPAESITQPLTDRPQLAVALRSGLDEPRWSATRGGVSTFVDSTAALRLGAR |
Ga0157375_133183751 | 3300013308 | Miscanthus Rhizosphere | GNDDRRPSNISEEGPDVRAAAARNRAANINERPMAAIDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSAT |
Ga0132256_1006673241 | 3300015372 | Arabidopsis Rhizosphere | MAATDEFDPDLVAAFIDGKLSGAERERVVRLLAESEEAFEIYADAVRARADLQADGIVPFPTPVPIPRPRPRWLTAGAPLAAAAALLIAVLPRVVSNPAATFAMGAESIARPLTDRPQLATSLRSALDE |
Ga0132256_1020266491 | 3300015372 | Arabidopsis Rhizosphere | MAAIDDFDPDLVAAFIDGRLSGAERDRVVRLLAQSEAAFEVYADALRAHADLAEDAPIPFPAPRPRPVWLTAGIPLAAAAALLIAVLPTLQSRRANATFAMGAERIAQPLTGQPQYATALRSALDEPRWSVTRGGGSTFVDTTAALRLGVRATELQVALGVEDRERAL |
Ga0207656_102538382 | 3300025321 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTF |
Ga0207680_103817391 | 3300025903 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARAT |
Ga0207647_107101411 | 3300025904 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVGARADLDAEAIIPLPIPDPVPIRRPRWLMAG |
Ga0207645_100001421 | 3300025907 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMTLRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYGELRKRINTGGSISSIKAAAVTADEHLHDFLESRWYGTGKW |
Ga0207695_113471392 | 3300025913 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWL |
Ga0207662_100147447 | 3300025918 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARDDLDADGIIRIADRRLVPSRRPRWVTAGAPLAAAAALLIAVLPRVLSSPA |
Ga0207657_104889932 | 3300025919 | Corn Rhizosphere | MAATDEFDPDLLAAFIDGRLSGAERERVVKLLAESEAAFEVYADAVRARDDLDADAIIPIPVRPPVTVRRPRWLTTGAPLAAAAALLIAVLPRVVSNPAATFAMRAESIAQPLTDRPQLAVALRSA |
Ga0207650_101828183 | 3300025925 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFAMRAESIAQPLTDRPQLAMALRSALDEPRWSATRGGVSTFVDS |
Ga0207690_100965511 | 3300025932 | Corn Rhizosphere | MAAINEFDPDLVAAFIDGRLSGADRERVVMLLAQSEAAFEIYADAVRARDDLGADAIIPLPARRSVPVRRPRWLTAGAPLAAAAALLIAVLPRVLSS |
Ga0207690_117302932 | 3300025932 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATF |
Ga0207686_104968172 | 3300025934 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEAAFEIYADAVRARDDLNADAIIPLPVRPPVAMHRRPRWLTAGAPLA |
Ga0207711_106997121 | 3300025941 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVGARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVAPNPAAT |
Ga0207689_101331323 | 3300025942 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLP |
Ga0207661_106856911 | 3300025944 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYGELRKRINTGGSISSIKAA |
Ga0207667_106734682 | 3300025949 | Corn Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLA |
Ga0207651_116978541 | 3300025960 | Switchgrass Rhizosphere | MSAPQRPRVATPMRPMAASNEFDPDLVAAFIDGRLSGADRERVVMLLAQSEAAFEIYADAVRARDDLGADAIIPLPARRSVPVRRPRWLTAGAPLAAAAALLIAVLPRVLSSPAATLA |
Ga0207712_100640991 | 3300025961 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPRWSATRGGPSTF |
Ga0207668_100887481 | 3300025972 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVLPRVETNLANAAFAMRAESIAQPLTGRPQLAMALRSGLDEPR |
Ga0207677_110717371 | 3300026023 | Miscanthus Rhizosphere | MAATDEFDPDLVAAFIDGKLSGADRERVVRLLADSEEAFEIYADAVRARADLEAEGIIPLPVPDPVPVRPAADPVPIRRSRWLTAGAPLAAAAALLIAVL |
Ga0207641_104184171 | 3300026088 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFALRAESIAQPSTNRRREERTDFRPDQRHPH |
Ga0207676_101397081 | 3300026095 | Switchgrass Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVKLLAESEAAFEIYADAVRAREDLDTDAIIPIRARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFAMRAESIAQPLT |
Ga0207683_105172971 | 3300026121 | Miscanthus Rhizosphere | VLQGLDRGNAARRPSNISEEARNVRAAAKNRAAIPTRPMAATDEFDPDLVAAFIDGKLSGPDRDRVVKLLAESEEAFEIYADAVRAREDLDADAIIPIPARPPVSVRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAAMTFAMRAE |
Ga0207428_102988161 | 3300027907 | Populus Rhizosphere | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLADSEEAFEIYADAVRARRDLDADAIVPFPAARPVPIRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFEMRAESIAQPLTDRPQLAMALRSALDEPRWSATRGGVSTFV |
Ga0247827_109955932 | 3300028889 | Soil | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLADSEEAFEIYADAVRARRDLDADAIVPFPAARPVPIRRPRWLTAGAPLAAAAALLIAVLPRVLSNPAATFEMRAESIAQPLTDRPQ |
Ga0310893_101390742 | 3300031892 | Soil | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVTEMVELLDSVTLSDATRAEYGKL |
Ga0310900_106825012 | 3300031908 | Soil | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAG |
Ga0310891_101859851 | 3300031913 | Soil | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLM |
Ga0310885_102035282 | 3300031943 | Soil | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLP |
Ga0314781_077291_3_584 | 3300034660 | Soil | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGARATDLEVAIAVGDRERAGRLVAEMVELLDSVTLSDATRAEY |
Ga0314801_132206_253_588 | 3300034676 | Soil | MAATDEFDPDLVAAFIDGRLSGAERERVVRLLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQP |
Ga0314803_033534_3_770 | 3300034678 | Soil | LLAESEEAFEIYADAVRARADLDAEAIIPLPIPDPVPIRRPRWLMAGAPLAAAAALLIAVLPRVVPNPAATFAMRADAITQPLTDRPQLAMALRSGLDEPRWSATRGGPSTFVDTTAALRLGAWATDLEVPIAVGDRERAGRLVAEMVELLDSVTLSDATRAEYGELRHRITTGDSISSIKAAAVTADEHLHDFLESRWYGTGKWLAAGELAARAHSADFFKSSETARFLKAAIRSGEFAPDEVEALRQVERAAKR |
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