Metagenome / Metatranscriptome Family F103773

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103773
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	92 residues
Representative Sequence	MDSETAQDQQTLEDQRTPQGQHVPNDEALKDQHALIAELGTSQESIDALVGELRSLDAQLEALATERHQHRLLHQVCDALGEL
Number of Associated Samples	81
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.98 %
% of genes near scaffold ends (potentially truncated)	97.03 %
% of genes from short scaffolds (< 2000 bps)	88.12 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (58.416 % of family members)
Environment Ontology (ENVO)	Unclassified (54.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (56.436 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.46% β-sheet: 0.00% Coil/Unstructured: 40.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02472	ExbD	71.29
PF01618	MotA_ExbB	8.91
PF13525	YfiO	3.96

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	71.29

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	97.03 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	40.59 %
Unclassified	root	N/A	1.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %

Name	Rank	Taxonomy	Distribution
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	34.65 %
Unclassified	root	N/A	1.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	34.65 %
Unclassified	root	N/A	1.98 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.99 %

Name	Rank	Taxonomy	Distribution
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	34.65 %
Unclassified	root	N/A	1.98 %
Desulfuromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Lysobacter daejeonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	34.65 %
Unclassified	root	N/A	1.98 %
Desulfuromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10196673	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300004633\|Ga0066395_10334163	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300005332\|Ga0066388_108050772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae	527	Open in IMG/M
3300005355\|Ga0070671_100464932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300005435\|Ga0070714_100501267	All Organisms → cellular organisms → Bacteria → Proteobacteria	1158	Open in IMG/M
3300005602\|Ga0070762_10088075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1777	Open in IMG/M
3300006173\|Ga0070716_100686851	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300006176\|Ga0070765_101499100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	635	Open in IMG/M
3300010048\|Ga0126373_10469494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1296	Open in IMG/M
3300010048\|Ga0126373_11939222	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300010358\|Ga0126370_11964862	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300010360\|Ga0126372_10412615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1237	Open in IMG/M
3300010366\|Ga0126379_11329831	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300010366\|Ga0126379_11818751	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300010376\|Ga0126381_100324363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	2119	Open in IMG/M
3300010376\|Ga0126381_102910336	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300010398\|Ga0126383_11994162	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300012362\|Ga0137361_10258146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1588	Open in IMG/M
3300012924\|Ga0137413_10793107	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300012971\|Ga0126369_12727744	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300015373\|Ga0132257_102748243	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300016357\|Ga0182032_10269422	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300016445\|Ga0182038_10266912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1384	Open in IMG/M
3300020170\|Ga0179594_10071684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1208	Open in IMG/M
3300020583\|Ga0210401_10035960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	4704	Open in IMG/M
3300021088\|Ga0210404_10304541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	877	Open in IMG/M
3300021180\|Ga0210396_10174681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1925	Open in IMG/M
3300021401\|Ga0210393_10069236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	2784	Open in IMG/M
3300021403\|Ga0210397_10014371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	4798	Open in IMG/M
3300021475\|Ga0210392_10535396	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300021478\|Ga0210402_10025781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	5062	Open in IMG/M
3300021560\|Ga0126371_11595246	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300021560\|Ga0126371_11978203	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300021560\|Ga0126371_12066140	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300022527\|Ga0242664_1120511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	556	Open in IMG/M
3300024283\|Ga0247670_1050157	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300025929\|Ga0207664_10516080	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300027105\|Ga0207944_1023084	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300027874\|Ga0209465_10446897	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031231\|Ga0170824_116205124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	921	Open in IMG/M
3300031543\|Ga0318516_10161741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1287	Open in IMG/M
3300031544\|Ga0318534_10455632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	733	Open in IMG/M
3300031544\|Ga0318534_10457243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	731	Open in IMG/M
3300031544\|Ga0318534_10667597	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300031546\|Ga0318538_10302377	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300031573\|Ga0310915_10245380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1260	Open in IMG/M
3300031573\|Ga0310915_11269231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	508	Open in IMG/M
3300031640\|Ga0318555_10316757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	844	Open in IMG/M
3300031668\|Ga0318542_10019623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	2755	Open in IMG/M
3300031668\|Ga0318542_10347807	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300031668\|Ga0318542_10517754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	620	Open in IMG/M
3300031679\|Ga0318561_10353670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	806	Open in IMG/M
3300031715\|Ga0307476_10169232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1577	Open in IMG/M
3300031715\|Ga0307476_10708011	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300031720\|Ga0307469_11215309	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300031736\|Ga0318501_10469672	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300031748\|Ga0318492_10503416	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300031753\|Ga0307477_10767278	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300031765\|Ga0318554_10488837	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300031768\|Ga0318509_10044915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	2229	Open in IMG/M
3300031768\|Ga0318509_10205748	All Organisms → cellular organisms → Bacteria → Proteobacteria	1095	Open in IMG/M
3300031769\|Ga0318526_10260032	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300031771\|Ga0318546_10443427	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300031771\|Ga0318546_10780851	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300031778\|Ga0318498_10291311	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300031779\|Ga0318566_10455147	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300031779\|Ga0318566_10466215	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300031782\|Ga0318552_10358534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	743	Open in IMG/M
3300031792\|Ga0318529_10424138	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300031796\|Ga0318576_10277262	All Organisms → cellular organisms → Bacteria → Proteobacteria	791	Open in IMG/M
3300031819\|Ga0318568_10121877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1578	Open in IMG/M
3300031821\|Ga0318567_10788367	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300031831\|Ga0318564_10054657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1741	Open in IMG/M
3300031833\|Ga0310917_11050523	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300031835\|Ga0318517_10033244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	2084	Open in IMG/M
3300031845\|Ga0318511_10486779	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300031859\|Ga0318527_10264622	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300031860\|Ga0318495_10004239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	5557	Open in IMG/M
3300031893\|Ga0318536_10225527	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300031893\|Ga0318536_10308075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	803	Open in IMG/M
3300031893\|Ga0318536_10489879	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300031894\|Ga0318522_10257991	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300031945\|Ga0310913_10158258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1569	Open in IMG/M
3300031962\|Ga0307479_11469199	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300031981\|Ga0318531_10258969	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300032001\|Ga0306922_10152594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	2470	Open in IMG/M
3300032001\|Ga0306922_11719046	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300032009\|Ga0318563_10430952	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300032009\|Ga0318563_10621763	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300032035\|Ga0310911_10789390	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300032035\|Ga0310911_10812512	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300032039\|Ga0318559_10187625	All Organisms → cellular organisms → Bacteria → Proteobacteria	948	Open in IMG/M
3300032043\|Ga0318556_10165709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1144	Open in IMG/M
3300032059\|Ga0318533_10257208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1261	Open in IMG/M
3300032065\|Ga0318513_10101870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	1344	Open in IMG/M
3300032068\|Ga0318553_10270662	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300032091\|Ga0318577_10495778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	582	Open in IMG/M
3300032261\|Ga0306920_101734600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter daejeonensis	883	Open in IMG/M
3300032805\|Ga0335078_10739830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1211	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.03%
Host-Associated	Host-Associated	2.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.03%
Plants	Host-Associated → Plants	2.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.15%
Loam	Environmental → Terrestrial → Soil → Loam	10.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	58.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027105	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_101966733	3300004633	Tropical Forest Soil	MDSEIAQEQQTLADTRTPQEDKAPDERAADEQSAPDAEAVKDQQALIAELGTSQESLDALVGELRALDAQLEALTPERNQHRLLHQVC
Ga0066395_103341631	3300004633	Tropical Forest Soil	MTVISTQGNGMTAETAQDQQTLEGPRTPLHQDTSDDRAPNDQPAPSGEALKDQQALIAELGTSQESVDALVGELRSLDAQLEA
Ga0066388_1080507721	3300005332	Tropical Forest Soil	MDSEIAQEQQTLEAPRTPQQHKAPNERAADEQSASGADAVKDQQALIAELGTSQESLDALVGELRALDAQLEALTPERNQHRLLHQVCDALGE
Ga0070671_1004649323	3300005355	Switchgrass Rhizosphere	MTVIAPQGNGMGSETAPEQQALDGQRPPQVHAAPGSEGLKDQDALVAQLGTAQESIDALVGELRSLDTQLEALTTERNQHRL
Ga0070714_1005012673	3300005435	Agricultural Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTAPDQKAPEGRAPHDQPAPGGAAPKDQKALIEELGTSQESVDALVGELRSLDAQLEA
Ga0070762_100880751	3300005602	Soil	MDSETAQDQQTLEDQRTPQGQHVPNDEALKDQQALIAELGTSQESIDALVGELRSLDAQLEALAIERHQHRLLHQICDA
Ga0068856_1021588441	3300005614	Corn Rhizosphere	MTVISAQGNGMTSDTAQAQQTLEDQRTPKDQQAPDGRASNDQHVPSGEALKDQEALIAELGTSQESIDALVGELR
Ga0070716_1006868512	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDSETAPDRQTLEGERTPQGPDAPRSEALKDQEALIAQLGTSQDSIDALVGELRSFDAQLEALTTERKQHRLLHQVCDALDE
Ga0070765_1014991002	3300006176	Soil	LTVISPQGNAMDSETAQDQQTLEDQRTPQGQHVPNDEALKDQQALIAELGTSQESIDALVGELRSLDAQLEALATERHQHRLLHQVCDALGELGK
Ga0126373_104694941	3300010048	Tropical Forest Soil	MTVISPQGNRMHSETAPDQQTLAAPRTPQDPQAPTDEAVKDQDALVAELGTQQESIDALVGNLRSLDAQLEALTTERNQHRLM
Ga0126373_119392221	3300010048	Tropical Forest Soil	MPSEAAPEPQTLEGPPIPENPQAPKDEALKDQEALIAELGTQQESIDTLVGELRSLDAQLEALSTERKQHRLLHQVCDALGELGQLEG
Ga0126370_119648621	3300010358	Tropical Forest Soil	MTSNTAQAQQTLDDQRTRNDQKAPEGASNDRHAPSGEALKAQQALITELGTSQESVDALVGDLRSLDAQLE
Ga0126372_104126151	3300010360	Tropical Forest Soil	MSVISAQGKGMTSEAAQEQQTLDGQRTPNDQQAPSNEAVKDQQALITELGTSQESVDALVGELRALDAQLEALSTERNQHRLLHQVCDALDEL
Ga0126379_113298312	3300010366	Tropical Forest Soil	MTSDTAQAQQTLDDQRTRNDQKAPDGASNDRHAPSGEALKDQQALITELGTSQESVDALVGELRSLDAQLEALSTERNQHRLL
Ga0126379_118187511	3300010366	Tropical Forest Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPGGRASHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRALDAQLEALAPECNQHRLLHQVCDALAELGQL
Ga0126381_1003243631	3300010376	Tropical Forest Soil	MTVISAQGNSMASETAQDQQSLDSQRTPQDPQAPHDLQAPHDPQAPHDPQAPHGEALKDQQALIAELGTSQESVDALVGELRAFDAQLEALTTERNQHRL
Ga0126381_1029103362	3300010376	Tropical Forest Soil	MTVISAQGNGMASETAQDQPTLEDQRTPTDQKPLDDRPLNDHQATSGEPVKDQQALIAALGTSQESVDALVGELRALDAQLEALAPERNQHRLLHQVCDALGELRQL
Ga0126383_119941621	3300010398	Tropical Forest Soil	MTVISAQGNGMTAETAQDQQTLEKQRTPQDQQAPNAAALKDQQALIAELGTSQESVDALVGELRSLDAQLEALTPERNQHRLLHQ
Ga0137361_102581464	3300012362	Vadose Zone Soil	VTVISPQGNGMNAEIAQEQRTLEDQRTPEDQQAPNNEALKDQGALLAELGTSQESVDALVGELRSLDAQLEALAGERNQHRLLHQVCDALGELG
Ga0137413_107931071	3300012924	Vadose Zone Soil	MNSETAQAQVEDQRTPQDRHVPNNEALKDQQALVVELGTSQESVDALVGELRALDAQLEALATERNQHRLLHQL
Ga0126369_127277442	3300012971	Tropical Forest Soil	MTVISPQGNGMDSETVPDRQTLDGQRMPQDHDAPSSGALKDQEALVAQLGTSQDSIDALVGELRSLDAQLVALTTERSQHRLLHQVCDALDELG
Ga0132257_1027482431	3300015373	Arabidopsis Rhizosphere	MTVISAQGNGMTSDTAQAQQTLEDQRTPKDQKAPDDRASNDQHAPSCEALKDQEALIAELGTSQESIDALVGELRSLDAHLEALSPERKQHRLLHQVCDALGELGKLGGAQLFW
Ga0182032_102694224	3300016357	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRASHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDAQLEALATERKQHRLMHQVC
Ga0182038_102669121	3300016445	Soil	MTVISAQGNDMTSDTAHDQQALEDRPTPQDQQASVDAAVDGQQAPKGEPLKDQQALIAELGTSQESLDALVGELRSLDGQLEALSTERKQHRLLHQVCDALGELGELGGAQLFWGTSEAITSGELQLGR
Ga0179594_100716841	3300020170	Vadose Zone Soil	MNAEIVQEQQTLEDQRTPEDQHAPNNEALKDQGALLAELGTSQESVDALVGELRSLDAQLEALAGERNQHRLLHQVCDALGELGKLGG
Ga0210401_100359607	3300020583	Soil	MDSETAQDQQTLEDQRTPQGQHVPNDEALKDQHALIAELGTSQESIDALVGELRSLDAQLEALATERHQHRLLHQVCDALGEL
Ga0210404_103045411	3300021088	Soil	MNSETAQDYQTLESQHTPCNPQAPNDAAMKDQEALIAALGTSQEYIDALVGALRALNAQLEALATERNQHRLLHQVCDALGELGQLGGAQLFWGTAEAVT
Ga0210396_101746814	3300021180	Soil	MASEAGQDQPTLADQRTPKDQQAPDDRALNEPQARGGEALKDQEALIAELGTSQESVDALVGELHSLD
Ga0210393_100692361	3300021401	Soil	MDSETAQDQQTLEDQRTPQGQHVPNDEALKDQQALMAELGTSQESIDALVGELRSLDAQLEALAIERNQHRLLHQICDALGELGK
Ga0210397_100143717	3300021403	Soil	MNSETAQDYQTLESQRTPCSPQAPNDAAMKDQEALIAALGTSQESIDALVGALRALNAQLEALATERNQHRLLHQVCDALGELGQLGGA
Ga0210392_105353962	3300021475	Soil	MDSETAQDQVEDQRTPQDHHVPKNEALKDQQALIAALGTSQESVDALVGELRSLDAQLEALATARNQHRLLHQVCDA
Ga0210402_100257811	3300021478	Soil	MASEAGQDQPTLADQRTPKDQQAPDDRALNEPQARGGEALKDQEALIAELGTSQESVDALVGELHSLDAQLEALSPE
Ga0126371_115952461	3300021560	Tropical Forest Soil	MDLETTQEREALADPRAPQDQPGPDDAAPKNQEALITELGASQESVDALVGELRSLEAQLEALATERNQHRLLHQACD
Ga0126371_119782032	3300021560	Tropical Forest Soil	MTSETAQDQQTLEDPRTPQDQQAPDERASNHQSAPSSEALKAQEALIAELGTSQESLDALVGELRSLDAQLEALTPERNQHRLLHQVC
Ga0126371_120661402	3300021560	Tropical Forest Soil	MTVISPQGNRMHSETAPDQQTLEDPRTPQDPQAPSAEALKDQQALIAELGTQQESIDALVGNLRSLVAQLEAPTTERTQHRLMHQ
Ga0242664_11205111	3300022527	Soil	MNSETAQDYQTLESQRTPCNPQASNDAAMKDQEALIAALGTSQEYIDALVGALRALNAQLEALATERNQHRLLHQVCDALGELGQLGGAQLFWETAEAVTT
Ga0247670_10501572	3300024283	Soil	MNSETAQDQQTLEDQRSPQDQHVPNDEALKDQEALLAELGTSQESIDALVGELRSLDAQLEALATERNQHRLLHQV
Ga0207700_103759063	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTVISAQGNGMTSDTAQDQQTLDDPRTAPDQKAPEGRAPHDQPAPGGAAPKDQKALIEELGTSQESVDALVGEL
Ga0207664_105160803	3300025929	Agricultural Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTAPDQKAPEGRAPHDQPAPGGAAPKDQKALIEELGTSQESVDALVGELRSLDAQLEALSPERNQHR
Ga0207944_10230842	3300027105	Forest Soil	MDSETAQDQVEDQRTPQDHHVPKNEALKDQQALIAALGTSQESVDALVGELRSLDAQLEALATARNQHRLLHQVCDALGELGKLGGAQLFWGTAQAVTTGEDQ
Ga0209465_104468971	3300027874	Tropical Forest Soil	QGDTMTVISPQGTGMDSETAPDRQTLEGERTPQDHEAPSSEALKDQEALIAQLGTSQDSIDALVGELRSLDGQLEALATERKQHRLLHQVCDALDELGDGVGGMTMPPAG
Ga0170824_1162051242	3300031231	Forest Soil	MDSETAQDQQTLEDLRTPQDQHVPNDEALKDQQALLTELGTSQESIDALVGEMRSLDAQLETLAIERNQHRLLHQVCDALGELGKLGGAQLFWGSSAAVATGEDQLGRVRDEGEEEKNN
Ga0318516_101617413	3300031543	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRAAHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDAQLEAL
Ga0318534_104556322	3300031544	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGELGQLGGAQLFWGSAEAVTSGEYQ
Ga0318534_104572432	3300031544	Soil	MDSEIAPEQQTLEDPRTPQQHKAPDARAADEQSAPGAEAVKDQQALIAELGTSQESLDALVGELRALDAQLEALTPERNQHRLLHQVCDALGELGQLG
Ga0318534_106675972	3300031544	Soil	MTVIPAQGNGMISDTAQDQQTLGDPRTPPDQKAPEGRASHDQPAPSGAAPKDQQALIEELGTSQESVDALVGELRSLDAQL
Ga0318538_103023772	3300031546	Soil	MDSEIAQEQQTLEDPRTPQQHKAPDERAADEQSASGADAVKDQQALIAELGTSQESLDALVGELRALDAQLEALTPERNQHRLLHQVCDALGE
Ga0310915_102453803	3300031573	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGELGQLGGAQLFWGSAEAVT
Ga0310915_112692312	3300031573	Soil	MDSEIAQEQQTLEDPRTPQQHKAPDERAADEQSASGADAVKDQQALIAELGTSQESLDALVGELRALDAQLEALTPERNQHRLLHQVCDALGELGQLGGAQ
Ga0318555_103167571	3300031640	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGELGQLGGAQLFWGSAEAVTSGEYQLG
Ga0318542_100196231	3300031668	Soil	MTSDTAHDHQALEDRPTPQDQQPPVDAAVDDQQAPNGEPLKDQQALMAELGTSQESLDALVGELRAFDGQLEALSTERKQHRLLHQVCDARGELGELGGAQLFWGTS
Ga0318542_103478072	3300031668	Soil	MTAETTQDQQTLDDPRTPPHQDTADARAPNDRPAPSDEAVKDQQALVAELGTSQESIDALVGDLRSLDAQLEALTPERNQHRLLHQV
Ga0318542_105177541	3300031668	Soil	MASETAQDQQSLDNQRTPHDPQAPQDLQGPQDPQAPNVEAVKDQQALIAELGTSQESVDALVGELRALDAQLEALGPERNQHRLLHQVCDALGELGELGGAQL
Ga0318561_103536702	3300031679	Soil	MTSDTAHDHQALEDRPTPQDQQPPVDAAVDDQQAPNGEPLKDQQALMAELGTSQESLDALVGELRAFDGQLEALSTERKQHRLLHQVCDALGELGELGGAQLFWGTSE
Ga0307476_101692321	3300031715	Hardwood Forest Soil	MASEAAQDQPTLADQLTPKDQKAPDDRASNDQQATGGEPLKDQEALIAELGTSQESLDALVGELRSFDAQLEALAPERTQHR
Ga0307476_107080111	3300031715	Hardwood Forest Soil	MTVISPQGNGMESATAPEQQTLAVERTPQDPPAPNEKALKDQDALVAALGTQQESIDALVGELRSLDAQLEALATERNRHRLLHQACDVLG
Ga0307469_112153091	3300031720	Hardwood Forest Soil	MNSETAQDQQTLEDQRSPQDQHVPNDEALKDQQALLAQLGTSQESIDALVGELRSLDAQLEALATERNQ
Ga0318501_104696722	3300031736	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGELGQLGGAQL
Ga0318492_105034162	3300031748	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGE
Ga0307477_107672781	3300031753	Hardwood Forest Soil	MTVISAQGNGMTSETAQDQQTLEDQRTPKDQKAADDRASNDQPAPSAEALKDQQALIAELGTSQEAVDALVGELRLLDAQLE
Ga0318554_104888371	3300031765	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRASHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDTQLEALSPERNRHRLL
Ga0318509_100449151	3300031768	Soil	MDSETAQDQQTLDNRQTPQGPQAPNAEALKDQQALIAELGTSQESVDALVGELRSLDAQLEALSPERKQHRLL
Ga0318509_102057483	3300031768	Soil	MDSEIAQEQQTLEDPRTPQQHNAPDERAADEQSASGADAVKDQQALIAELGTSQESLDALVGELRALDAQLEALTPERNQHRLLHQV
Ga0318526_102600322	3300031769	Soil	MTVISAQGNDMTSDTAHDQQALEDRPTPQDQQASVDVAVDGQQAPKGEPLKDQQALIAELGTSQESLDALVGELRSLDGQLEALSTERKQHRLLHQVCDALGELGELGGAQLF
Ga0318546_104434271	3300031771	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRASHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDAQLEALSPERNQ
Ga0318546_107808512	3300031771	Soil	MTVISPQGNGMDSETAQVQPTLEDQRTPQDPQAPNGAAPKDQQALIVELGSSQESLDALVGELRSLDGQLEALAIERSQHRLLHQVCDALGELDQ
Ga0318498_102913111	3300031778	Soil	MIVISAQGNDMTSDTAHDHQALEDRPTPQDQQASVDVAVDGQQAPKGEPLKDQQALIAELGTSQESLDALVGELRSLDGQLEALSTERKQHRLLHQVCDALGELGELG
Ga0318566_104551472	3300031779	Soil	MIVISAQGNDMTSDTAHDHQALEDRPTPQDQQPPVDAAVDDQQAPNGEPLKDQQALMAELGTSQESLDALVGELRAFDGQLEALSTERKQHRLLHQVCDALGELGELGGAQLFWGTSEA
Ga0318566_104662151	3300031779	Soil	MTVISPQGNGMDSETAQVQPTLEDQRTPQDPQAPNGAAPKDQQALIVELGSSQESLDALVGELCSLDGQLEALSTERKQHRLMHQVC
Ga0318552_103585341	3300031782	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRASHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDAQLEALSPERNQHRLLHQVCDALGELDKLGGA
Ga0318529_104241381	3300031792	Soil	MASETAQDQQSLDNQRTPHDPQAPQDLQGPQDPQAPNVEAVKDQQALIAELGTSQESVDALVGELRALDAQLEALGPERNQHRLLHQVCDAL
Ga0318576_102772622	3300031796	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGELGQLGGAQLFWG
Ga0318568_101218771	3300031819	Soil	MDSEIAPEQQTLEDPRTPQQHKAPDARAADEQSAPGAEAVKDQQALIAELGTSQESLDALVGELRALDAQLEALTPERNQ
Ga0318567_107883671	3300031821	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRAAHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDAQL
Ga0318564_100546574	3300031831	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGELGQLGGAQLFWGSAE
Ga0310917_110505231	3300031833	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGELGQLGGA
Ga0318517_100332441	3300031835	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRASHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDAQLEALS
Ga0318511_104867791	3300031845	Soil	MTVISAQGNDMTSDTAHDQQALEDRPTPQDQQASVDAAVDGQQAPKGEPLKDQQALIAELGTSQESLDALVGELRSLDGQLEALSTERKQHRLLHQVCDALGELGELG
Ga0318527_102646221	3300031859	Soil	MTVISAQGNSMTAETTQDQQTLDDPRMPPHQGTSDARAPNDRPAPSDEAVKDQQALVAELGTSQESIDALV
Ga0318495_100042391	3300031860	Soil	MNSETAQDQQTLADQRSPQDQQPPHDPQAPHGEALKDQQALIAELGTSQESVDALVGELRAFDAQLEALT
Ga0318536_102255271	3300031893	Soil	MDSEIAQEQQTLEDPRTPQQHKAPDERAADEQSASGADAVKDQQALIAELGTSQESLDALVGELRSLDTQLESLTPERNQHRL
Ga0318536_103080752	3300031893	Soil	MTAETTQDQQTLDDPRMPPHQGTSDARAPNDRPAPSDEAVKDQQALVAELGTSQESIDALVGDLRSLDAQLEALTPERNQHRLLHQVCDALGELRQLGGAQLF
Ga0318536_104898792	3300031893	Soil	MIVISAQGNDMTSDTAHDHQALEDRPTPQDQQPPVDAAVDDQQAPNGEPLKDQQALMAELGTSQESLDALVGELRAFDGQLEALSTERKQHRLLHQVCDALGELGELGGAQLFWGTSEAVTTGELQL
Ga0318522_102579911	3300031894	Soil	MIVISAQGNDMTSDTAHDHQALEDRPTPQDQQPPVDAAVDDQQAPNGEPLKDQQALMAELGTSQESLDALVGELRAFDGQLEALSTERKQHRLLHQVCDALGELGELGGAQLFWGTSE
Ga0310913_101582581	3300031945	Soil	MTAETTQDQQTLDDSRTPPRQDTSDARAPNDQPAPSDEAVKDQQALVAELGTSQESIDALVGDLRSLDAQLEALTPERNQHRLLHQVC
Ga0307479_114691991	3300031962	Hardwood Forest Soil	MASEAAQDQQTLENQRTPEDQKSADERASNDQQAPSAVVKDQHALIAELGTSQESVDELVGELRSLDAQLEALSTERNQHRLLHEVC
Ga0318531_102589691	3300031981	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGELGQLGGAQLFWGSAEA
Ga0306922_101525941	3300032001	Soil	MDSETAHDVPTLENPSTPQDPQAGNVEAVKDQQALIAELGTSQESLDDLVGELRSLDGQLEALSTERKQHRLMHQVCDALGELGQLGGAQLFWGSADAVTSGEYQLGRV
Ga0306922_117190461	3300032001	Soil	MTVISPQGNGMDSETAQVQPTLEDQRTPQDPQAPNGAAPKDQQALIVELGSSQESLDALVGELRSLDGQLEALAIERSQHRLLHQV
Ga0318563_104309522	3300032009	Soil	MDSETAQDQQTLDNRQTPQGPQAPNAEALKDQQALIAELGTSQESVDALVGELRAIDAQLEALAPERNQHRLLHQ
Ga0318563_106217631	3300032009	Soil	MTANSPQGNSMDSEAAQDQQTLENPRTPQEQAAPNDEALKDQEALIAQLGNSQESIDALVSELHAFDTQLEALATERNQHRLLH
Ga0310911_107893902	3300032035	Soil	MTVISAQGNDMTSDTAHDQQALEDRPTPQDQQASVDVAVDGQQAPKGEPLKDQQALIAELGTSQESLDALVGELRSLDGQLEALSTERKQHRLLHQVC
Ga0310911_108125121	3300032035	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRASHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDAQL
Ga0318559_101876251	3300032039	Soil	MDSEIAQEQQTLEDPRTPQQHNAPDERAADEQSASGADAVKDQQALIAELGTSQESLDALVGELRALDAQLEALTPERNQHRLLHQVCDALGE
Ga0318556_101657093	3300032043	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRASHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDAQLA
Ga0318533_102572083	3300032059	Soil	MTVISAQGNDMTSDTAHDQQALEDRPTPQDQQASVDAAVDGQQAPKGEPLKDQQALIAELGTSQESLDALVGELRSLDGQLEALSTERKQHRLLHQVCDALGELGELGGAQLFWGTSE
Ga0318513_101018703	3300032065	Soil	MTVISAQGNDMTSDTAHDQQALEDRPTPQDQQASVDAAVDGQQAPKGEPLKDQQALIAELGTSQESLDALVGELRSLDGQLEALSTERKQHRLLHQVCDA
Ga0318553_102706622	3300032068	Soil	MDLETAQNQPALENATPQDPSAPKDASAPQDPSAPQDPSAPNAEASKNQQALIAELGTSQESLDALVGELRSLDAQLEALTTERNQHRLLHQVCDALG
Ga0318577_104957781	3300032091	Soil	MDSEIAQEQQTLEDPRTPQQHNAPDERAADEQSASGADAVKDQQALIAELGTSQESLDALVGELRSLDAQLEALTPERNQHRLLHQVCDALGELGQLGGAQLF
Ga0306920_1017346001	3300032261	Soil	MTVISAQGNGMTSDTAQDQQTLDDPRTPPDQKAPEGRASHDQPAPSGAAAKDQTALIEELGTSQESVDALVGELRSLDAQLEALSPERNQHRLLHQVCDALGELDKLGG
Ga0335078_107398301	3300032805	Soil	MDSETMQDQQTPENLPTPEEPHDEPRKDQQALIAELGMAQGTIDALVGELRARDAQLEALATERNQHRLLQQICDGLGEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103773

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences