Metagenome / Metatranscriptome Family F103751

Basic Information
Family ID	F103751
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	79 residues
Representative Sequence	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSAST
Number of Associated Samples	90
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.39 %
% of genes near scaffold ends (potentially truncated)	36.63 %
% of genes from short scaffolds (< 2000 bps)	81.19 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Bacteria (64.356 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.842 % of family members)
Environment Ontology (ENVO)	Unclassified (23.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.356 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 0.00% Coil/Unstructured: 75.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00484	Pro_CA	22.77
PF00005	ABC_tran	9.90
PF08028	Acyl-CoA_dh_2	5.94
PF04286	DUF445	3.96
PF12399	BCA_ABC_TP_C	1.98
PF08238	Sel1	0.99
PF03976	PPK2	0.99
PF09107	SelB-wing_3	0.99
PF00292	PAX	0.99
PF13188	PAS_8	0.99
PF00581	Rhodanese	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	22.77
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	5.94
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	3.96
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	3.96
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.36 %
Unclassified	root	N/A	35.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.36 %
Unclassified	root	N/A	35.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.36 %
Unclassified	root	N/A	35.64 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.50 %
Unclassified	root	N/A	35.64 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.63 %
Unclassified	root	N/A	35.64 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.99 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	35.64 %
Unclassified	root	N/A	35.64 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.98 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.99 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.99 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	1.98 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.99 %
Pleomorphomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas	0.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.64 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	1.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.99 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig72321	Not Available	728	Open in IMG/M
3300002245\|JGIcombinedJ26739_100000319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24953	Open in IMG/M
3300003505\|JGIcombinedJ51221_10003938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4317	Open in IMG/M
3300005332\|Ga0066388_100309244	All Organisms → cellular organisms → Bacteria → Proteobacteria	2226	Open in IMG/M
3300005332\|Ga0066388_100866222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1486	Open in IMG/M
3300005435\|Ga0070714_101292111	Not Available	712	Open in IMG/M
3300005610\|Ga0070763_10057941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1860	Open in IMG/M
3300005764\|Ga0066903_102783944	All Organisms → cellular organisms → Bacteria → Proteobacteria	949	Open in IMG/M
3300005764\|Ga0066903_104862330	All Organisms → cellular organisms → Bacteria → Proteobacteria	714	Open in IMG/M
3300005921\|Ga0070766_10471160	Not Available	831	Open in IMG/M
3300006041\|Ga0075023_100564136	Not Available	523	Open in IMG/M
3300006047\|Ga0075024_100062840	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300006057\|Ga0075026_100123320	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300006086\|Ga0075019_10533318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	730	Open in IMG/M
3300006102\|Ga0075015_100089947	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300006173\|Ga0070716_101007717	Not Available	659	Open in IMG/M
3300006176\|Ga0070765_100682382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	970	Open in IMG/M
3300006578\|Ga0074059_11396619	Not Available	505	Open in IMG/M
3300006852\|Ga0075433_11203798	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006904\|Ga0075424_101019769	Not Available	882	Open in IMG/M
3300009521\|Ga0116222_1306727	Not Available	686	Open in IMG/M
3300010046\|Ga0126384_10528305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1021	Open in IMG/M
3300010359\|Ga0126376_11939940	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300010361\|Ga0126378_12272036	Not Available	619	Open in IMG/M
3300010371\|Ga0134125_10963506	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300010375\|Ga0105239_10208519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2190	Open in IMG/M
3300010376\|Ga0126381_103381368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	628	Open in IMG/M
3300010376\|Ga0126381_105072869	Not Available	504	Open in IMG/M
3300010379\|Ga0136449_103025928	Not Available	655	Open in IMG/M
3300010396\|Ga0134126_10529628	Not Available	1355	Open in IMG/M
3300010396\|Ga0134126_12659678	Not Available	543	Open in IMG/M
3300010398\|Ga0126383_10931206	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300012951\|Ga0164300_10009598	All Organisms → cellular organisms → Bacteria → Proteobacteria	2991	Open in IMG/M
3300012960\|Ga0164301_10090136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1727	Open in IMG/M
3300012984\|Ga0164309_11164051	Not Available	645	Open in IMG/M
3300012989\|Ga0164305_10731309	Not Available	812	Open in IMG/M
3300016270\|Ga0182036_10639385	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300016294\|Ga0182041_10329703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1276	Open in IMG/M
3300016294\|Ga0182041_10731361	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300016319\|Ga0182033_10032358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3358	Open in IMG/M
3300016319\|Ga0182033_11542301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	600	Open in IMG/M
3300016357\|Ga0182032_10781511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	806	Open in IMG/M
3300016387\|Ga0182040_11471608	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300016404\|Ga0182037_10065488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2493	Open in IMG/M
3300016445\|Ga0182038_10181061	All Organisms → cellular organisms → Bacteria → Proteobacteria	1640	Open in IMG/M
3300017822\|Ga0187802_10003452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	4611	Open in IMG/M
3300017924\|Ga0187820_1222387	Not Available	597	Open in IMG/M
3300017934\|Ga0187803_10409222	Not Available	550	Open in IMG/M
3300017942\|Ga0187808_10455356	Not Available	589	Open in IMG/M
3300017947\|Ga0187785_10534544	Not Available	590	Open in IMG/M
3300017955\|Ga0187817_10983663	Not Available	540	Open in IMG/M
3300017970\|Ga0187783_10013395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6044	Open in IMG/M
3300017970\|Ga0187783_10022508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4657	Open in IMG/M
3300017972\|Ga0187781_10000164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	45576	Open in IMG/M
3300017972\|Ga0187781_10074315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	2345	Open in IMG/M
3300017974\|Ga0187777_10326392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1052	Open in IMG/M
3300018007\|Ga0187805_10364243	Not Available	669	Open in IMG/M
3300018058\|Ga0187766_10181064	All Organisms → cellular organisms → Bacteria → Proteobacteria	1323	Open in IMG/M
3300020579\|Ga0210407_10970161	Not Available	649	Open in IMG/M
3300020580\|Ga0210403_10020572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5266	Open in IMG/M
3300020582\|Ga0210395_10097948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2168	Open in IMG/M
3300021180\|Ga0210396_10346188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1311	Open in IMG/M
3300021180\|Ga0210396_10597266	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300021402\|Ga0210385_10075843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2300	Open in IMG/M
3300021403\|Ga0210397_10020129	All Organisms → cellular organisms → Bacteria	4093	Open in IMG/M
3300021406\|Ga0210386_10042549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3587	Open in IMG/M
3300021439\|Ga0213879_10216748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	572	Open in IMG/M
3300021444\|Ga0213878_10332560	Not Available	655	Open in IMG/M
3300021474\|Ga0210390_11651572	Not Available	503	Open in IMG/M
3300021479\|Ga0210410_10715126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	884	Open in IMG/M
3300021560\|Ga0126371_12750686	Not Available	596	Open in IMG/M
3300021560\|Ga0126371_12888526	Not Available	582	Open in IMG/M
3300022724\|Ga0242665_10040269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1199	Open in IMG/M
3300025927\|Ga0207687_11289438	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300025972\|Ga0207668_11441120	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300027567\|Ga0209115_1124101	Not Available	583	Open in IMG/M
3300027855\|Ga0209693_10085163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1562	Open in IMG/M
3300027894\|Ga0209068_10330843	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300027908\|Ga0209006_10161389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1963	Open in IMG/M
3300027915\|Ga0209069_10034753	All Organisms → cellular organisms → Bacteria → Proteobacteria	2360	Open in IMG/M
3300030494\|Ga0310037_10151900	All Organisms → cellular organisms → Bacteria → Proteobacteria	1050	Open in IMG/M
3300031128\|Ga0170823_12877468	Not Available	531	Open in IMG/M
3300031474\|Ga0170818_104863604	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	735	Open in IMG/M
3300031545\|Ga0318541_10784171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	532	Open in IMG/M
3300031561\|Ga0318528_10621463	Not Available	579	Open in IMG/M
3300031718\|Ga0307474_10193912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1545	Open in IMG/M
3300031719\|Ga0306917_10709889	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300031879\|Ga0306919_10729822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	763	Open in IMG/M
3300031890\|Ga0306925_11264377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	736	Open in IMG/M
3300031896\|Ga0318551_10565697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	655	Open in IMG/M
3300031947\|Ga0310909_11077305	Not Available	654	Open in IMG/M
3300031954\|Ga0306926_11422030	Not Available	804	Open in IMG/M
3300031962\|Ga0307479_11777480	Not Available	569	Open in IMG/M
3300032001\|Ga0306922_10916517	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300032013\|Ga0310906_10899333	Not Available	631	Open in IMG/M
3300032180\|Ga0307471_102246131	Not Available	688	Open in IMG/M
3300032261\|Ga0306920_102279383	Not Available	751	Open in IMG/M
3300032261\|Ga0306920_103561749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	574	Open in IMG/M
3300032783\|Ga0335079_11677707	Not Available	622	Open in IMG/M
3300032828\|Ga0335080_11390745	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300032898\|Ga0335072_10061475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4985	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.06%
Host-Associated	Host-Associated	4.95%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.19%
Aquatic	Environmental → Aquatic	12.87%
Plants	Host-Associated → Plants	4.95%
Modeled	Engineered → Modeled	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.19%
Sediment	Environmental → Aquatic → Sediment	6.93%
Freshwater	Environmental → Aquatic → Freshwater	5.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.95%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.43%
Loam	Environmental → Terrestrial → Soil → Loam	13.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.97%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0321.00004660	2166559005	Simulated	MHGNGVKSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPSPSAST
JGIcombinedJ26739_1000003191	3300002245	Forest Soil	MGTVVRLRRPTISAKVIKELLKLGYLQPAKRHKPHVVERALLRLRADLVRGGVVYGGNTGDRAPATSADDQPPVAAPRSIASS*
JGIcombinedJ51221_100039385	3300003505	Forest Soil	MHGNGVQSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDN
Ga0066388_1003092444	3300005332	Tropical Forest Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGISLRDPIPSTTDDNQPAAQPAASVPGAST*
Ga0066388_1008662223	3300005332	Tropical Forest Soil	IKELLRLGYLQPAKRFKPHIVERALVRLRAELVRDGVVQGSSPLNDRMPAAPDDNQLPSAATRPSAST*
Ga0070714_1012921111	3300005435	Agricultural Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGNSLSDPISSAADDSQPSASVPGTSS*
Ga0070763_100579411	3300005610	Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSAST*
Ga0066903_1027839441	3300005764	Tropical Forest Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGNSLSDPISSAADDSQPSVSVPGTSS*
Ga0066903_1048623302	3300005764	Tropical Forest Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGSSPLNDRMPATGEDNPQPSAAPGPSAPT*
Ga0070766_104711601	3300005921	Soil	MGTVVRLRRPTISAKVIKELLKLGYLQPAKRHKPHVVERALLRLRADLVRGGVVYGGNTGDRAPATSADDQP
Ga0075023_1005641362	3300006041	Watersheds	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDSVVKGGTPLNDRMPAAPDDNQQPSAVPGPSVST*
Ga0075024_1000628403	3300006047	Watersheds	VKSRRPTISPKVIKELLRLGYLQPVKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSVST*
Ga0075026_1001233201	3300006057	Watersheds	GVKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNNRMPAAPDDNQQPSAVPGPSVST*
Ga0075019_105333182	3300006086	Watersheds	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPS
Ga0075015_1000899474	3300006102	Watersheds	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSVST*
Ga0070716_1010077172	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MHGNGVQSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPS
Ga0070765_1006823822	3300006176	Soil	SAKVIKELLKLGYLQPAKRHKPHVVERALLRLRADLVRGGVVYGGNTGDRAPATSADDQPPVAAPRSIASS*
Ga0074059_113966191	3300006578	Soil	SRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPSPSAST*
Ga0075433_112037982	3300006852	Populus Rhizosphere	VQLRRPTISPKVIKELLRLGYLQPAKRFKPHVVERALARLRADLVRDGVVKGGSPLNDRPPTVADDSQQPAAVPGPGAST*
Ga0075424_1010197691	3300006904	Populus Rhizosphere	VQLRRPTISPKVIKELLRLGYLQPAKRFKPHVVERALARLRADLVRDGVVKGGSPLNDRPPTVADDSQQPAAVPGPG
Ga0116222_13067272	3300009521	Peatlands Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNNRMPAAPDDNQQPSAVPGPSVST*
Ga0126384_105283051	3300010046	Tropical Forest Soil	ISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGSSPLNDRMPATGEDNPQPSAAPGPSAST*
Ga0126376_119399402	3300010359	Tropical Forest Soil	IEEWWCTLRRRAISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGNSLSDPISSATDDSQPSASVPSTSS*
Ga0126378_122720361	3300010361	Tropical Forest Soil	LRRPAISAKVIKQLLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGISLRDPIPSTTDDNQPAAQPAASVPGAST*
Ga0134125_109635062	3300010371	Terrestrial Soil	VVQLRRPTISPKVIKELLRLGYLQPAKRFKPHVVERALARLRADLVRDGVVKGGSPLNDRPPTVADDSQQPAAVPGPGAST*
Ga0105239_102085191	3300010375	Corn Rhizosphere	STQRIGIVVQLRRPTISPKVIKELLRLGYLQPAKRFKPHVVERALARLRADLVRDGVVKGGSPLNDRPPTVADDSQQPAAVPGPGAST*
Ga0126381_1033813682	3300010376	Tropical Forest Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSSPLNDRTPAVPDDNQQLSPAPGPNAST*
Ga0126381_1050728691	3300010376	Tropical Forest Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVQRALVRLRADLVRDGVVKESNSLRDPIPSTTDDNQPAAQPAASVPGAST*
Ga0136449_1030259282	3300010379	Peatlands Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVTGGSALNDRMPAAPDDGQQPSAVPGPSAST*
Ga0134126_105296281	3300010396	Terrestrial Soil	KVIKELLRLGYLQPAKRFKPHVVERALARLRADLVRDGVVKGGSPLNDRPPTVADDSQQPAAVPGPGAST*
Ga0134126_126596781	3300010396	Terrestrial Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGNSLSDPISATADDSQSSALPSASVPGTSS*
Ga0126383_109312062	3300010398	Tropical Forest Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERAMLRLRADLVRDGVVKGSNPLNDRIPYAAEDNPQPSAAPGPRPSTNVIVES*
Ga0164300_100095983	3300012951	Soil	MHGNGVQSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPSPSTST*
Ga0164301_100901363	3300012960	Soil	MHGNGVQSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPSPSAST*
Ga0164309_111640511	3300012984	Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVARALVRLRADLVRDGVVKGGNSLSDPISSAADDSQPSASVLGTSS*
Ga0164305_107313091	3300012989	Soil	MHGNGVQSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPS
Ga0182036_106393851	3300016270	Soil	VKPRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGFVKGSSPLNDRVPAVPDDNQQLSPATGPNAST
Ga0182041_103297031	3300016294	Soil	VRSRRPTISPKIIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGFVKGSSSLNDRMPAVPDDNQQLSPAPGPNAST
Ga0182041_107313612	3300016294	Soil	LRLGYLQPAKRFKPHIVQRALVRLRADLVRDGVVKESNSLRDPIPSTTDDNQPAAQPAASVPGAST
Ga0182033_100323583	3300016319	Soil	LLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSSSLNDRMPAVRDDNQQLSPAPGPNAST
Ga0182033_115423012	3300016319	Soil	ARSVRPMGTEVQLRRPAISAKVIKELLALGHLQPAKRYKPHIVERALARLRGDLVRDGVVHGSFPPEDRAPGSPGDGKRPAPIPRSGAST
Ga0182032_107815111	3300016357	Soil	LLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSSPLNDRMPAVPDDNQQLSPAPGPNAST
Ga0182040_114716082	3300016387	Soil	LRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGISLRDPIPSTTDDNQPAAQPAASVPGAST
Ga0182037_100654883	3300016404	Soil	VKPRRPTISPRVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSSPLNDRMPAVPDDNQQLSPAPGPNAST
Ga0182038_101810612	3300016445	Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSSPLNDRMPAVPDDNQQLSPAPGPNAST
Ga0187802_100034526	3300017822	Freshwater Sediment	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSAST
Ga0187820_12223871	3300017924	Freshwater Sediment	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSVST
Ga0187803_104092221	3300017934	Freshwater Sediment	VKSRRPTISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVTGGSPLNDRMPAAPDD
Ga0187808_104553562	3300017942	Freshwater Sediment	VAGDVKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSAST
Ga0187785_105345441	3300017947	Tropical Peatland	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGNSLSDPISSTADDSQPSASVPGTSS
Ga0187817_109836631	3300017955	Freshwater Sediment	THGNGVKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSAST
Ga0187783_100133954	3300017970	Tropical Peatland	MGTVVQLRRPTISAKVIKELLTLGYLQPAKRYKLHIVERALTRLRADLVRDGVVHGTVPPEDRASATPDDDQQPLTIPRTSAST
Ga0187783_100225084	3300017970	Tropical Peatland	MGTVVHLRRPAISAKVIKELLTLGYLQPAKRYKPHIVERALARLRADLVRDGVVHGSTPPDDRASAASDDSQQPVAVPRTSAST
Ga0187781_1000016426	3300017972	Tropical Peatland	MGTVVQLRRPAISAKVIKELLRLGYLQPAKRYKPHIIERALARLRADLVRDGVVHGSIPPEDRASATPDDGQKPLLVPGTSAST
Ga0187781_100743154	3300017972	Tropical Peatland	ITELLRLGYLQPAKRYKPHVVERALVRLRADLVRDGVVKGSNLLSDPVAPAADDNQPSASGPSAST
Ga0187777_103263923	3300017974	Tropical Peatland	RIARSVRPMGTVVQLRRPAISAKVIKELLALGYLQPAKRYKPHIVERALARLRADLVRDGVVHGSVPPEDRAPGSPGDGKRPAPIPRSGAST
Ga0187805_103642432	3300018007	Freshwater Sediment	VKSRRPTISAKVVKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSVST
Ga0187766_101810642	3300018058	Tropical Peatland	MGTVVQLRRPAISAKVIKELLALGYLQPAKRYKPHIVERALARLRADLVHDGVVHGSVPPEDRAPGSPGDGKRPAPIPRSGAST
Ga0210407_109701611	3300020579	Soil	MHGNGVQSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSVPSPSAST
Ga0210403_100205723	3300020580	Soil	MHGNGVQSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPSPSAST
Ga0210395_100979483	3300020582	Soil	MGTVVRLRRPTISAKVIKELLKLGYLQPAKRHKPHVVERALLRLRADLVRGGVVYGGNTGDRAPAASADDQPPVAAPRSIASS
Ga0210396_103461883	3300021180	Soil	MGTVVRLRRPTISAKVIKELLKLGYLQSAKRHKPHVVERALLRLRADLVRGGVVYGGNTGDRAPAASADDQPPVAAPRSIASS
Ga0210396_105972662	3300021180	Soil	AETVVQLRRPAISTKVIKELLSLGYLQPAKRHKPHVVERALARLRADLVRDGVVNGSNSLADPIAPAADENQPPASGPGAST
Ga0210385_100758433	3300021402	Soil	MHGNGVQSRRPTISPKVVKELLRLGYLQPAKRFKPHIVDRALVRLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPSPSAST
Ga0210397_100201291	3300021403	Soil	MHGNGVKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPSPSAST
Ga0210386_100425493	3300021406	Soil	MGTVVRLRRPTISAKVIKELLKLGYLQPAKRHKPHVVERALLRLRADLVRGGVVYGGNTGDRAPATSADDQPPVAAPRSIASS
Ga0213879_102167482	3300021439	Bulk Soil	NRRQGDATHGNGVKPRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSSPLNDRMPAVPDDNQQLSPAPGPNAST
Ga0213878_103325602	3300021444	Bulk Soil	VKPRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSSPLNDRMPAVPDDNQQLSPAPGPNAST
Ga0210390_116515721	3300021474	Soil	TMHGNGVKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALTRLRADLVRDGVVKGGSPLNDRTPAAPDDNQQPSAVPSPSAST
Ga0210410_107151262	3300021479	Soil	NSVRHFGSALRFGTSVRHMGTVVRLRRPTISAKVIKELLKLGYLQPAKRHKPHVVERALLRLRADLVRGGVVYGGNTGDRAPAASADDQPPVAAPRSIASS
Ga0126371_127506861	3300021560	Tropical Forest Soil	RRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSNPLNDRIPAAAEDNPQPSAAPGPRPSTNVIVES
Ga0126371_128885261	3300021560	Tropical Forest Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVQRALVRLRADLVRDGVVKESNSLRDPIPSTNDDNQPAAQPAASVPGAST
Ga0242665_100402691	3300022724	Soil	SRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPSPSAST
Ga0207687_112894381	3300025927	Miscanthus Rhizosphere	KVIKELLRLGYLQPAKRFKPHVVERALARLRADLVRDGVVKGGSPLNDRPPTVADDSQQPAAGPGPGAST
Ga0207668_114411202	3300025972	Switchgrass Rhizosphere	FATVSLPKRIRYNRRRSTQRIGIVVQLRRPTISPKVIKELLRLGYLQPAKRFKPHVVERALARLRADLVRDGVVKGGSPLNDRPPTVADDSQQPAAVPGPGAST
Ga0209115_11241011	3300027567	Forest Soil	MGTVVRLRRPTISAKVIKELLKLGYLQPAKRHKPHVVERALLRLRADLVRGGVVYGGNTGDRAPAASADDQ
Ga0209693_100851634	3300027855	Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDN
Ga0209068_103308431	3300027894	Watersheds	LLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSVST
Ga0209006_101613892	3300027908	Forest Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAAST
Ga0209069_100347532	3300027915	Watersheds	VKSRRPTISPKVIKELLRLGYLQPVKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSAST
Ga0310037_101519002	3300030494	Peatlands Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNNRMPAAPDDNQQPSAVPGPSVST
Ga0170823_128774682	3300031128	Forest Soil	KVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVPGPSAST
Ga0170818_1048636042	3300031474	Forest Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGTPLNDRMPAAPDDNQQPSAVP
Ga0318541_107841711	3300031545	Soil	TISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSSPLNDRMPAVPDDNQQLSPAPGPNAST
Ga0318528_106214631	3300031561	Soil	VKPRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGIVKGSSPLNDRMPAVPDDNQQLSPAPGPNAST
Ga0307474_101939122	3300031718	Hardwood Forest Soil	MHGNGVKSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVQGSGPPNDRMPTAPDDNRQPSAAPGPSAST
Ga0306917_107098892	3300031719	Soil	VIKELLRLGYLQPAKRFKPHIVQRALVRLRADLVRDGVVKGSNSLRDPIPSTTDDNEPAAQPAASVPGAST
Ga0306919_107298222	3300031879	Soil	VKPRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGVVKGSSPLNDRMPAVPDDNQQLSPATGPNAST
Ga0306925_112643772	3300031890	Soil	MGTVVQLRRPAISAKVIKELLALGYLQPAKRYKPHIVERALARLRGDLVRDGVVHGSVPPEDRAPGSPGDGKQPTAIPRSGAST
Ga0318551_105656972	3300031896	Soil	LLRLGYLQPAKRFKPHIVERALVNLRADLVRDGFVKGSSSLNDRMPAVPDDNQQLSPAPGPNAST
Ga0310909_110773052	3300031947	Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGISLRDPIPSTTDDNQPAAQPAASVPGAST
Ga0306926_114220302	3300031954	Soil	MGTEVQLRRPAISAKVIKELLALGHLQPAKRYKPHIVERALARLRADLVRDGVVHGSFPPEDRAPGSPGDGKRPAPIPRSG
Ga0307479_117774801	3300031962	Hardwood Forest Soil	VKSRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGSPLSDRMPAAADDSQQPSPVLPGSNASSAST
Ga0306922_109165171	3300032001	Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVQRALVRLRADLVRDGVVKGSNSLRDPIPSTTDDNQPAAQPAASVPGAST
Ga0310906_108993331	3300032013	Soil	VQLRRPTISPKVIKELLRLGYLQPAKRFKPHVVERALARLRADLVRDGVVKGGSPLNDRPPTVADDSQQPAAVPGPGAST
Ga0307471_1022461312	3300032180	Hardwood Forest Soil	MYGNGVQSRRPTISPKVVKELLRLGYLQPAKRFKPHIVERALARLRADLVRDGVVKGGSPLNDRIPAAPDDNQQPSAVPGPSAST
Ga0306920_1022793832	3300032261	Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVQRALVRLRADLVRDGVVKESNSLRDPIPSTTDDNQPAAQPAASVPGSST
Ga0306920_1035617492	3300032261	Soil	VKPRRPTISPKVIKELLRLGYLQPAKRFKPHIVERALVNLRADLVRDGFVKGSSSLNDRMPAVPDDNQQLSPAPGPNAST
Ga0335079_116777072	3300032783	Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGNSLTDPISSPADDNQPSASVPGTSS
Ga0335080_113907451	3300032828	Soil	LRRPAISAKVIKELLRLGYLQPAKRFKPHIVERALVRLRADLVRDGVVKGGNSLSDPISSATDDSQPSASVPG
Ga0335072_100614755	3300032898	Soil	MGMVARLRRPTISAKVIKELLKLGYLQPAKRHKPHVVERALLRLRADLVRGGVVYGGNTGDRAQAASADDPQPVAAPRSIASS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103751

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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