Metagenome / Metatranscriptome Family F103709

Basic Information
Family ID	F103709
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	80 residues
Representative Sequence	VGRGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Number of Associated Samples	98
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.40 %
% of genes near scaffold ends (potentially truncated)	35.64 %
% of genes from short scaffolds (< 2000 bps)	94.06 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Most Common Taxonomy
Group	Bacteria (96.040 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (7.921 % of family members)
Environment Ontology (ENVO)	Unclassified (21.782 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.554 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF00078	RVT_1	23.00
PF08388	GIIM	6.00
PF00664	ABC_membrane	1.00
PF08448	PAS_4	1.00

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.04 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.04 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.04 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.24 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	73.27 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	52.48 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	35.64 %
Unclassified	root	N/A	3.96 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	35.64 %
Unclassified	root	N/A	3.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.99 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	21.78 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	5.94 %
Unclassified	root	N/A	3.96 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.99 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	21.78 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	5.94 %
Unclassified	root	N/A	3.96 %
Mesorhizobium sp. STM 4661	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01AM2E1	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300000833\|JGI12273J12029_10164900	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300001422\|Draft_103522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1925	Open in IMG/M
3300002182\|JGI24721J26819_10035176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3176	Open in IMG/M
3300002966\|JGI24721J44947_10144051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1395	Open in IMG/M
3300003573\|Ga0007412J51696_1089098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300004480\|Ga0062592_100700884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	881	Open in IMG/M
3300004635\|Ga0062388_101939366	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005332\|Ga0066388_100732095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1591	Open in IMG/M
3300005343\|Ga0070687_101172830	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005547\|Ga0070693_100622572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300005573\|Ga0078972_1009928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18287	Open in IMG/M
3300005591\|Ga0070761_10338713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	910	Open in IMG/M
3300005712\|Ga0070764_10454098	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300006050\|Ga0075028_100371797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	812	Open in IMG/M
3300006162\|Ga0075030_101485049	Not Available	531	Open in IMG/M
3300006174\|Ga0075014_100546980	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300006358\|Ga0068871_101887614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300006904\|Ga0075424_100250730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1882	Open in IMG/M
3300006954\|Ga0079219_10271325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1026	Open in IMG/M
3300009085\|Ga0105103_10539507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	658	Open in IMG/M
3300009503\|Ga0123519_10657595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	547	Open in IMG/M
3300009510\|Ga0116230_10486914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	948	Open in IMG/M
3300009623\|Ga0116133_1040593	All Organisms → cellular organisms → Bacteria → Proteobacteria	1152	Open in IMG/M
3300009635\|Ga0116117_1096438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	739	Open in IMG/M
3300010045\|Ga0126311_11534511	Not Available	559	Open in IMG/M
3300010048\|Ga0126373_10969773	Not Available	915	Open in IMG/M
3300010139\|Ga0127464_1073453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
3300010166\|Ga0126306_10716071	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300010339\|Ga0074046_10677796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	606	Open in IMG/M
3300010375\|Ga0105239_11403689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300010379\|Ga0136449_101804226	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300010855\|Ga0126355_1173875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	564	Open in IMG/M
3300010860\|Ga0126351_1104760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	597	Open in IMG/M
3300010864\|Ga0126357_1042811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	669	Open in IMG/M
3300010869\|Ga0126359_1406234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	516	Open in IMG/M
3300011120\|Ga0150983_16215534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300012010\|Ga0120118_1168256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	520	Open in IMG/M
3300012489\|Ga0157349_1011622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	721	Open in IMG/M
3300012948\|Ga0126375_11746724	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012958\|Ga0164299_10641988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300012988\|Ga0164306_10912451	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300013100\|Ga0157373_11500895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514	Open in IMG/M
3300013296\|Ga0157374_10236218	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300013306\|Ga0163162_11005207	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300014493\|Ga0182016_10164570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1474	Open in IMG/M
3300015356\|Ga0134073_10041520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1201	Open in IMG/M
3300016698\|Ga0181503_1302287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	610	Open in IMG/M
3300018034\|Ga0187863_10252967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	979	Open in IMG/M
3300018037\|Ga0187883_10358221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	746	Open in IMG/M
3300019242\|Ga0181502_1239316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	818	Open in IMG/M
3300020069\|Ga0197907_10226566	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300020082\|Ga0206353_11746691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	741	Open in IMG/M
3300021361\|Ga0213872_10006770	All Organisms → cellular organisms → Bacteria	5705	Open in IMG/M
3300021361\|Ga0213872_10006770	All Organisms → cellular organisms → Bacteria	5705	Open in IMG/M
3300021477\|Ga0210398_11442758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	537	Open in IMG/M
3300021560\|Ga0126371_11039530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	960	Open in IMG/M
3300022711\|Ga0242674_1029879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	680	Open in IMG/M
3300022863\|Ga0224532_1034408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300026078\|Ga0207702_11719459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300026222\|Ga0209862_1057334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	688	Open in IMG/M
3300027524\|Ga0208998_1030069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	865	Open in IMG/M
3300027729\|Ga0209248_10087353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300027767\|Ga0209655_10143815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300027817\|Ga0209112_10168337	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300027874\|Ga0209465_10094456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1464	Open in IMG/M
3300027879\|Ga0209169_10147274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1225	Open in IMG/M
3300027894\|Ga0209068_10820884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	548	Open in IMG/M
3300027898\|Ga0209067_10771156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300027972\|Ga0209079_10295733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	549	Open in IMG/M
3300028705\|Ga0307276_10099082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	703	Open in IMG/M
3300028808\|Ga0302228_10293725	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300029701\|Ga0222748_1036486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300029951\|Ga0311371_11049374	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300029954\|Ga0311331_10942512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	757	Open in IMG/M
3300029954\|Ga0311331_11529386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	543	Open in IMG/M
3300029999\|Ga0311339_11139543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	719	Open in IMG/M
3300030511\|Ga0268241_10151797	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300030730\|Ga0307482_1200861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300030738\|Ga0265462_10653903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	816	Open in IMG/M
3300030743\|Ga0265461_11983135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	663	Open in IMG/M
3300030874\|Ga0265742_1019229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	573	Open in IMG/M
3300030943\|Ga0311366_11738181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	533	Open in IMG/M
3300031096\|Ga0308193_1023138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300031231\|Ga0170824_106052511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	559	Open in IMG/M
3300031236\|Ga0302324_102042760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300031453\|Ga0272425_1067258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1848	Open in IMG/M
3300031470\|Ga0272432_1097948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1452	Open in IMG/M
3300031472\|Ga0272437_1408140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300031545\|Ga0318541_10768943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	537	Open in IMG/M
3300031813\|Ga0316217_10308215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	612	Open in IMG/M
3300031820\|Ga0307473_11012948	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031942\|Ga0310916_10603337	Not Available	933	Open in IMG/M
3300032120\|Ga0316053_107438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	727	Open in IMG/M
3300032515\|Ga0348332_10509249	All Organisms → cellular organisms → Bacteria → Proteobacteria	2144	Open in IMG/M
3300032515\|Ga0348332_10990136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300032756\|Ga0315742_12356905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	604	Open in IMG/M
3300032829\|Ga0335070_11813125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	552	Open in IMG/M
3300032955\|Ga0335076_10133577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2402	Open in IMG/M
3300033289\|Ga0310914_11829113	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300034129\|Ga0370493_0092817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	961	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.12%
Host-Associated	Host-Associated	10.89%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.33%
Aquatic	Environmental → Aquatic	20.79%
Plants	Host-Associated → Plants	10.89%
Solid Waste	Engineered → Solid Waste	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.46%
Freshwater	Environmental → Aquatic → Freshwater	11.88%
Peat	Environmental → Terrestrial → Peat	7.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.94%
Sediment	Environmental → Aquatic → Sediment	4.95%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.96%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	2.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.97%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.98%
Roots	Host-Associated → Plants → Roots	0.99%
Peat Moss	Host-Associated → Plants → Peat Moss	0.99%
Grass	Engineered → Solid Waste → Grass	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.63%
Loam	Environmental → Terrestrial → Soil → Loam	9.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.95%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Sand	Environmental → Terrestrial → Soil → Sand	1.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.98%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.99%
Composting	Engineered → Solid Waste → Grass → Composting	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.98%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.99%
Oil-Contaminated	Environmental → Terrestrial → Soil → Sand → Oil-Contaminated	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.96%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	3.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.97%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	2.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.98%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.98%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.99%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.99%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.99%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.99%
Hydrocarbon Resource Environments	Environmental → Terrestrial → Soil → Sand → Oil-Contaminated → Hydrocarbon Resource Environments	0.99%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.99%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.99%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000833	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate C) 0C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300001422	Oil sands microbial communities from Horse River, Alberta, Canada - outcrops	Environmental	Open in IMG/M
3300002182	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01	Environmental	Open in IMG/M
3300002966	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01	Environmental	Open in IMG/M
3300003573	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Bulk_28 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005573	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPADES assembly)	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009503	Hot spring microbial communities from Yellowstone National Park - Yellowstone National Park OP-RAMG-02	Environmental	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010139	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010855	Boreal forest soil eukaryotic communities from Alaska, USA - W1-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016698	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026222	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061 (SPAdes)	Environmental	Open in IMG/M
3300027524	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030874	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031453	Rock endolithic microbial communities from Victoria Land, Antarctica - Pudding Butte sud	Environmental	Open in IMG/M
3300031470	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley nord	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_04066510	2170459017	Switchgrass, Maize And Mischanthus Litter	LFWSIGVVGTACRKGEPGNWGRPIMGEGSGLNVVAERRLWRVSDRVIVLLRLGNASGGKDPDFWCAFDGVEDW
JGI12273J12029_101649002	3300000833	Soil	MDADPPDIPGKARVGWGSNRQEHPFWSIGVVGAACRKGEPGNWGRPIMGEGRGLNVAFRRRPGWVSDRVTVPLRPGNAGGGKDPDFWCAFNQAEDR*
Draft_1035223	3300001422	Hydrocarbon Resource Environments	VEWGSNRQMHPFWSIGVVGTACQKGEPGNWGRPVVGEGSGLDVVAERRLWRVSDRVIVLLRLGNASGGKDPDFWCAFEGVEDW*
JGI24721J26819_100351762	3300002182	Hot Spring	MHPFRSIGVVGTACREGEAGNWGRPVAGEGSGLNDVAGRRLRRVSDRVIILQRLGNASGGKDPDFWYAFEGAEDW*
JGI24721J44947_101440511	3300002966	Hot Spring	KAQVGRGSNRQMHPFRSIGVVGTACREGEAGNWGRPVAGEGSGLNDVAGRRLRRVSDRVIILQRLGNASGGKDPDFWYAFEGAEDW*
Ga0007412J51696_10890981	3300003573	Avena Fatua Rhizosphere	GTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0062592_1007008841	3300004480	Soil	MDADPPVKRGRPEWNGEVNRQKHPFWPIGVLGTARWKGGPGNWGRPVSGEGCGLNDAVRCRSVRVSDRVIRLLKPGNAGGGKDPDFWCASNGDEDW*
Ga0062388_1019393662	3300004635	Bog Forest Soil	IGVVGTACRKGEPGNWGRPVLGEGSGLDVVAERRLGRASDRVIVLSRLGNASGGKDPDFWCAFEGVEDW*
Ga0066388_1007320951	3300005332	Tropical Forest Soil	MHPLWSIGVMGTACWKGEPGNWGRPVLDEGSGLNDAIGRRSAWESDRVIGPVKPGNAGGGKDPDFWCASDGDEDW*
Ga0070687_1011728302	3300005343	Switchgrass Rhizosphere	GVVGTACRKGDPGNWERPIMGEGSGLNVVAERRLWRVSDRVIVLLRLGNASGGKDPDFWCAFDGVEDW*
Ga0070693_1006225721	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0078972_100992818	3300005573	Hot Spring	MHPFRSIGVVGTACREGEAGNWGRPVAGEGSGLNDVIGRRHWRVSDRVIVLQRLGNASGGKDPDFWY
Ga0070761_103387132	3300005591	Soil	VGRGSNRQTHPFWSIGVAGTACRKGELGNWGRPVAGEGSGLNVVAGRRFRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0070764_104540982	3300005712	Soil	VGRGSNRQTHPFWSIGVVGTACREGESGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEEAEDR*
Ga0075028_1003717972	3300006050	Watersheds	VGRGSNRQTHPFWSIGVVGTACREGESGNWGRPVAGEGSGLDVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0075030_1014850492	3300006162	Watersheds	ESEVMDADPPEKRGARVEQGSNRQMHLFWSIGVLGTARWKGEPGNWGRPVLGEGCGLNGRLWAPVCAGVGQGRTTNEPGNAGGGKDPDFWCAFDGEEDW*
Ga0075014_1005469802	3300006174	Watersheds	VGWGSNRQTHPFWSIGVVGTACREGESGNWGRPVAGEGSGLDVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0068871_1018876142	3300006358	Miscanthus Rhizosphere	GSNRQTHPFRSIGVMGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0075424_1002507303	3300006904	Populus Rhizosphere	VERGSNRQKHPFWPIGVLGTARWKGGPGNWGRPVSGEGCGLNDAVRCRSVRVSDRVIRLLRPGNAGGGKDPDFWCASNGDEDW*
Ga0079219_102713252	3300006954	Agricultural Soil	VERGSNRQKHPFWPIGVLGTARWKGGPGNWGRPVSGEGCGLNDAVRCRSVRVSDRVIRLLKPGNADGGKDPDFWCASDGDEDW*
Ga0105103_105395071	3300009085	Freshwater Sediment	DAPVRSTGVMGTAFRKGEPGNWGSPVAGEGSGLDVVAGRRPRWVSDRVIVLLRLGNASGGKDPDFWYAFEGAEDR*
Ga0123519_106575952	3300009503	Hot Spring	MHPFRSIGVVGTACREGEAGNWGRPVAGEGSGLNDVAGRRLRRVSDRVIVLQRLGNASGGKDPDFWYAFEGAEDW*
Ga0116230_104869142	3300009510	Host-Associated	VGRGSNRQTHSFRSIGVVGTACLKGEPGNWGRPVAGEGSGLDVVAGRRPRRVSDRVIVLSRPGNAGGGKDPDFWYAFEGAEDR*
Ga0116133_10405932	3300009623	Peatland	VGRGSNRQTHPFWSIGVVGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0116117_10964381	3300009635	Peatland	THPFRSIGVMGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0126311_115345111	3300010045	Serpentine Soil	TGKARVERGSNRQTHPFWSIGVVGTACREGEPGNWGRPIMGEGSGLNDADRRRHRWGSDRVVVLLRPGNAGGGKDPDFWCAC*
Ga0126373_109697732	3300010048	Tropical Forest Soil	WGSNRQKHPFRSIGVVGTARWKGEPGNWGRPVLGEGCGLNGADRRRPARESDRVVRPMKPGNAGGGKGPDFWCAFDGEEDW*
Ga0127464_10734531	3300010139	Grasslands Soil	VGRGSNRQTHPSWSIGVVGTACWNGGPGNWGRPVAGEGSGLNVVAGRWLRRVSDRVVVPLKPGNAGGGKDPDF
Ga0126306_107160712	3300010166	Serpentine Soil	GSNRQTHLFWSIGVVGTACRKGDPSNWGRPAWAEIAPPNIVLRWFTRVSDRVVVLLKLGNARGGKGPDFWCAFEGAEDW*
Ga0074046_106777962	3300010339	Bog Forest Soil	VGRGSNRQTHPFWSIGVVGTACREGESGNWGRPVAGEGSGLDVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWCAFEAAADGCEWR*
Ga0105239_114036891	3300010375	Corn Rhizosphere	VGRGSNRQTHPFRSIGVMGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0136449_1018042262	3300010379	Peatlands Soil	CREGESGNWGRPVAGGGSGLDVVAGRRLRRGSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0126355_11738752	3300010855	Boreal Forest Soil	VGRGSNRQTHPFWSIGVVGTACRKGEPGNWGRPVAGEGSGLNVVVGRRLRRVSDRVIVLSRPGNSGGGKDPDFWYAFEGAEDR*
Ga0126351_11047602	3300010860	Boreal Forest Soil	VGRGSNRQTHPFWSIGVLGTACRKGEPGNWGRPVAGEGSGLNVVVGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0126357_10428111	3300010864	Boreal Forest Soil	VGRGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGLNVVVGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0126359_14062341	3300010869	Boreal Forest Soil	VGRGSNRQTHPFWSIGVLGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0150983_162155341	3300011120	Forest Soil	VGRGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0120118_11682561	3300012010	Permafrost	MHPSRSAGVVSTARWKGDAGNRGRPVAGEGSGLNVASGRRLWRGSDGVIVPLQPGNAGEG
Ga0157349_10116221	3300012489	Unplanted Soil	VERGSNRQMHLFRSIGVLGTARWKGEPGNWGRPVLVEGCGLNGAYRRRTARESDRVVRPMKPGSAGGGKGPDFWCAFDEEEDW*
Ga0126375_117467242	3300012948	Tropical Forest Soil	NRQMHPLWSIGVMGTACWKGEPGNWGRPVLDEGSGLNDAIGRRSAWESDRVIGPVKPGNAGGGKDPDFWCASDGDEDW*
Ga0164299_106419881	3300012958	Soil	VERGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0164306_109124512	3300012988	Soil	AQVGRGSNRQTHPFRSIGVMGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0157373_115008951	3300013100	Corn Rhizosphere	VERGSNRQTHPFWSIGVVGTACREGEAGKWGRPVWHEGSGLDVAAGRRCWRESDRVIRPLMSGNAGGGKDPDFWCAFEDGEDQGDWR*
Ga0157374_102362182	3300013296	Miscanthus Rhizosphere	DTGKARVERGSNRQTHPFRSIGVVGTACREGEPGNWGRPVAGEGSGLNVVAERRLWRVSDRVIVLLRLGNASGGKDPDFWCAFDGVEDW*
Ga0163162_110052072	3300013306	Switchgrass Rhizosphere	VGWGSNRQTHPFRSIGVMGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR*
Ga0182016_101645702	3300014493	Bog	VERGSNRQTHPLRSIGVVGTACRKGEPGNWGRPITGEGSGLNDADRRRLRWVSDRVIVLPRLGNASGGKDPDFWYAFEGTEDW*
Ga0134073_100415202	3300015356	Grasslands Soil	VERGSNRQTHPFRSIGVVGTACWKGEPGNWGRPVMGEGSGLNVVAGRRLGRVSDRAVLLLRLGNASGGKDPDFWCACDGAEDR*
Ga0181503_13022871	3300016698	Peatland	VERGSNQQMHPFWSIGVVGTACRKGEPGNWGRPVMGEGSGLDAVIGRWLWRVSDRVIVLPRLGNASGGKDPDFWYAFKEAEDW
Ga0187863_102529672	3300018034	Peatland	VGRGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0187883_103582212	3300018037	Peatland	VGRGSNRQTHPFRSIGVVGTACRKGEPGNWGRPAAGEGSGLNDVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0181502_12393161	3300019242	Peatland	MHPFWSIGVVGTACRKGEPGNWGRPVMGEGSGLDAVIGRWLWRVSDRVIVLPRLGNASGGKDPDFWYAFKEAEDW
Ga0197907_102265662	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VGRGSNRQTHPFRSIGVMGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0206353_117466911	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MHPFRSIGVMGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0213872_100067705	3300021361	Rhizosphere	MHPFWSIGVLGTACWKGESGNWGRPVLDEGSGLNGAIGRRSARESDRVVRPMKPGNAGGGKDPDFWCASNGDEEW
Ga0213872_100067708	3300021361	Rhizosphere	MHPLWSIGVLGTACWKGGSGNWGRPVLDEGSGLNGAIGRRSARESDRVVRPMKPGNAGGGKGPDFWCASDGDED
Ga0210398_114427582	3300021477	Soil	LGTACWKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0126371_110395302	3300021560	Tropical Forest Soil	VDRGSNRQTHLFQSIGVVGTACWKGELGNWGRPVWAEVAPLTLFRRWSPRASDRVVVLLRLGNASEGKGPDFWCAFEGAEDW
Ga0242674_10298792	3300022711	Soil	VEWGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGLNGVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0224532_10344081	3300022863	Soil	VERGSNRQTHPLRSIGVVGTACRKGEPGNWGRPITGEGSGLNDADRRRLRWVSDRVIVLPRLGNASGGKDPDFWYAFEGTEDW
Ga0207702_117194591	3300026078	Corn Rhizosphere	FRSIGVMGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0209862_10573342	3300026222	Permafrost Soil	IGVVGTACRKGEPGNWGRPVAGEGSGLDVVAGRRLRRVSDRAVVLPRLGNASGGKGPDFWRAFEVGEDGVIGDEPSNT
Ga0208998_10300692	3300027524	Forest Soil	MTGKARAERGSNQQMHPLRSIGVMGTACRKGEPGNWGSPVMSEGSGLDAVAGRRLWRVSDRVIVLLKPGNAGRGKDPDFWCAFEVAEDW
Ga0209248_100873531	3300027729	Bog Forest Soil	VERGSNQQMHPFLSIGVVGTACRKGEPGNWGRPVMGEGSGLDAVIGRWLWRVSDRVIVLTKLGNAGGGKGPDFWCAFEGTEDW
Ga0209655_101438152	3300027767	Bog Forest Soil	VERGSNRQTHPFRSIGVVGTACRKGEPGNWGRPAVGEGSDLDVVAGRRLRWASDRVIVLPRLGNASGGKDPDFWYAFEGVEDW
Ga0209112_101683371	3300027817	Forest Soil	VERGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSDLDVVAGRRLGRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0209465_100944562	3300027874	Tropical Forest Soil	MHPLWSIGVMGTACWKGEPGNWGRPVLDEGSGLNDAIGRRSAWESDRVIGPVRPGNAGGGKDPDFWCASDGDEDW
Ga0209169_101472742	3300027879	Soil	VGRGSNRQTHPFWSIGVVGTACREGESGNWGRPVAGEGSDLDVVAGRRLGRVSDRVVILLRLGNASGGKDPDFWYAFEEAEDR
Ga0209068_108208841	3300027894	Watersheds	VGRGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGLNGVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0209067_107711561	3300027898	Watersheds	AQVGRGSNRQTHSFRSIGVVGTACLKGEPGNWGRPVAGEGSGLDVVAGRRPRRVSDRVIVLSRPGNAGGGKDPDFWCAFEGAEDR
Ga0209079_102957332	3300027972	Freshwater Sediment	PVRSTGVMGTAFRKGEPGNWGSPVAGEGSGLDVVAGRRPRWVSDRVIVLLRLGKASGGKDPDFWYAFEGAEDR
Ga0307276_100990822	3300028705	Soil	VGRGSNRQTHPFWSIGVVGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0302228_102937251	3300028808	Palsa	AQVGRGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGLNGVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0222748_10364862	3300029701	Soil	VGRGSNRQTHPFRSSGVMGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0311371_110493744	3300029951	Palsa	MHPFLSIGVVGTACRKGEPGNWGRPVMGEGSGLDAVIGRWLWRVSDRVIVLTKLGNAGGGKGPDFWCAFEGTEDW
Ga0311331_109425121	3300029954	Bog	VGRGSNRQTHPFRSIGVVGTACREGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYA
Ga0311331_115293862	3300029954	Bog	LGRGSNRQTHSFRSIGVVGTACLKGEPGNWGRPVAGEGSGLDVVAGRRPRRVSDRVIVLSRPGNAGGGKDPDFWYAFEEAEDR
Ga0311339_111395432	3300029999	Palsa	VGRGSNRQTHPFRSIGVVGTACREGETGNWGRPVAGEGSGLNDVAGRRLRRVSDRVVILLRLGNASGGKDPDFRYAFEGAEDR
Ga0268241_101517972	3300030511	Soil	ITGKARVGWGSNRQVHPFWSIGVVGAACRKGEPGNWGRPIMGEGRGLNVASRRRSGWVSDRVTVPLRPGNAGGGKDPDFWCAFNQAEER
Ga0307482_12008611	3300030730	Hardwood Forest Soil	QDLPVSAIFWAWPLPRTTPLAQVGRGSNRQTHPFWSIGVLGTACRKGEPGNWGRPVAGEGSGLNVVVGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0265462_106539031	3300030738	Soil	VGRGSNRQTHPFRSIGVVGTACWKGELGNWGRPVAGEGSGLDVVAGRRPGRVSDRVIVLSRPGNFGGGKDPDFWYAFEGAEDR
Ga0265461_119831351	3300030743	Soil	VGRGSNRQTHPFWSIGVVGTACRKGEPGNWGRPVAGEGSGLDVVAGRRLRRVSDRVIVLSRPGNSGGGKGPDFWYAFEGA
Ga0265742_10192292	3300030874	Soil	VGWGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGLEAVAGRLLRRVSDRVVVLPRLGNASGGKDPDFWYAFKGAEHR
Ga0311366_117381811	3300030943	Fen	VERGSNRQTHPFRSIGVVGTACREGEPGNWGRPAGAEVAPPTSSRRWSWRASDRVVVLLRLGNASG
Ga0308193_10231381	3300031096	Soil	VERGSNRQTHPFWSIGVMGTACRKGEPGNWGRPVAGEGSGFNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0170824_1060525111	3300031231	Forest Soil	VGRGSNRQTHPFWSIGVLGTACRKGEPGNWGRPVAGEGSGLNVVVGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0302324_1020427602	3300031236	Palsa	VGRGSNRQTHPFRSIGVVGTACWKGELGNWGRPVAGEGSGLDVVAGRRPGRVSDRVIVLSRPGNAGGGKDPDFWYAFKGAEDR
Ga0272425_10672583	3300031453	Rock	VERGSNQQMHPFWSIGVMGTACRKGEPGNWGRPVVGEGSGLHVVAGRRLWRVSDRVIVLLRLGNASGGKDPDFWCAFEIAEDW
Ga0272432_10979482	3300031470	Rock	VGRGSNQQMHPFWSIGVVGTACRKGEPGNWGRPVMGEGSGLDVVVGRRLWRVSDRVIVLLRPGNAGGGKDPDFWCAFEIAEDW
Ga0272437_14081401	3300031472	Rock	TACRKGEPGNWGRPVMGEGSGLDVVVGRRLWRVSDRVIILLRPGNAGGGKGPDFWCAFEIAEDW
Ga0318541_107689431	3300031545	Soil	VEWRSNRQMHPFRSIGVVGAACWEGELGNWGRPVLGEDSALNGAVRHRPARASDRVVVLMRLGNASGGKDPDF
Ga0316217_103082151	3300031813	Freshwater	VERGSNRRLHLFWSIGVVGTACWEGEPGNWGRPIMGEGSGLNVADRRRHRWVSDRVIVLLRLGNASGGKDPDFWCAFEEAEEW
Ga0307473_110129482	3300031820	Hardwood Forest Soil	WKGEPGNWGRPVSDEGSGLNGTVRCRSAWESDRVVRPTKPGNAGGGKDPDFWCASDGDED
Ga0310916_106033371	3300031942	Soil	VMGTACWKGEPGNWGRPVLDGGSGLNEAIGRRSAWESDRVIGPVKPGNAGGGKAPDFWCASDGDEDW
Ga0316053_1074382	3300032120	Soil	VGRGSNRQTHPFWSIGVVGTACRKGEPGNWGRPVAGEGSGLDVVAGRRPGRVSDRVIVLSRPGNFGGGKDPDFWYVFDVGKVGVIGDEP
Ga0348332_105092491	3300032515	Plant Litter	PFWSIGVVGTACRKGEPGNWGRPVAGEGSGLDVVAGRRPGRVSDRVIVLSRPGNFGGGKDPDFWYAFEGAEDR
Ga0348332_109901361	3300032515	Plant Litter	PFWSIGVVGTACRKGEPGNWGRPVAGEGSGLDVVAGRRPGRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0315742_123569051	3300032756	Forest Soil	VGRGSNRQTHPFWSIGVVGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRESDRVVILLRLGNASGGKDPDFWYAFEGAEDR
Ga0335070_118131251	3300032829	Soil	RQTHLFRSIGVMGTARWKGGSGNWGRPVLGEGSGLNGAIGRRSVRESDRVIRPMKPGNAGGGKDPDFWCALDGEEDW
Ga0335076_101335772	3300032955	Soil	MHLFRSIGVVGTARWKGEPGNWGRPVSGEGCGLNGAVRRRSARESDRVIRPMKPGNAGGGKGPDFWCAFDGEEDW
Ga0310914_118291132	3300033289	Soil	QMHPLWSIGVMGTACWKGEPGNWGRPVLDGGSGLNEAIGRRSAWESDRVIGPVKPGNAGGGKAPDFWCASDGDEDW
Ga0370493_0092817_523_774	3300034129	Untreated Peat Soil	MGRGSNRQTHPFRSIGVVGTACRKGEPGNWGRPVAGEGSGLNVVAGRRLRRVSDRVVILLRLGNASGGKDPDFWYAFEGAEDR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103709

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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