NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103699

Metagenome / Metatranscriptome Family F103699

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103699
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 54 residues
Representative Sequence VTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDKPEGGPLG
Number of Associated Samples 90
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 1.98 %
% of genes from short scaffolds (< 2000 bps) 1.98 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.010 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(30.693 % of family members)
Environment Ontology (ENVO) Unclassified
(31.683 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.475 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 40.74%    β-sheet: 0.00%    Coil/Unstructured: 59.26%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF01039Carboxyl_trans 95.05
PF00930DPPIV_N 0.99
PF00830Ribosomal_L28 0.99
PF00326Peptidase_S9 0.99
PF02786CPSase_L_D2 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 95.05
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 95.05
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 95.05
COG0227Ribosomal protein L28Translation, ribosomal structure and biogenesis [J] 0.99
COG0823Periplasmic component TolB of the Tol biopolymer transport systemIntracellular trafficking, secretion, and vesicular transport [U] 0.99
COG1506Dipeptidyl aminopeptidase/acylaminoacyl peptidaseAmino acid transport and metabolism [E] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.01 %
All OrganismsrootAll Organisms0.99 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300017955|Ga0187817_10973989All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300031545|Ga0318541_10876960Not Available501Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.94%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.95%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.95%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.95%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.96%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.96%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.96%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.97%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.98%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.98%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.98%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.98%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.98%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.98%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.99%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.99%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.99%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003218Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014151Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaGEnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016702Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300019788Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026862Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31 (SPAdes)EnvironmentalOpen in IMG/M
3300026921Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)EnvironmentalOpen in IMG/M
3300027010Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)EnvironmentalOpen in IMG/M
3300027011Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)EnvironmentalOpen in IMG/M
3300027042Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)EnvironmentalOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033561Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fractionEnvironmentalOpen in IMG/M
3300033821Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-X0EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10166717413300002245Forest SoilIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDKPEGGPLG*
JGI26339J46600_1011070313300003218Bog Forest SoilVTSIEAPLPRAGAIAAEILLGVVLLLGTVWLATHAAVLIFAPKNDKPEGGPLG*
Ga0070733_1058678513300005541Surface SoilRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDKPEGGPLG*
Ga0070763_1017577123300005610SoilATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHASVLIFAPKNDKPEGGPLG*
Ga0066903_10736970623300005764Tropical Forest SoilATLYVTAIQSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG*
Ga0075014_10091074913300006174WatershedsYVTSIEHPLARAGAIAAELLLGVILLLGTVWLATHLAVLIFAPKQESKEGGPVG*
Ga0116216_1089486413300009698Peatlands SoilTLYVTSIASPLPRAGAIAAEILLGVILLLGTVWLATHLAVLIFAPEQQPPEGGTLG*
Ga0126380_1129899123300010043Tropical Forest SoilGAIVAEILLGVVLLLGTVWLATHVAVKIFAAKDDAPAGGPLG*
Ga0126384_1041294613300010046Tropical Forest SoilLVRATLYVTAIQSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0074046_1062170923300010339Bog Forest SoilISIDSPWQRAGAIAAEILLGIVLLLGTVWLATHLAVLIFAPKHNPPEGGKLG*
Ga0126381_10109680123300010376Tropical Forest SoilDYVVRIESPLARAGAIAAEILLGVVLLLGTVWLATHFAVLIFGPKPNSREGDRLG*
Ga0150983_1064504723300011120Forest SoilILVRATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDEPKGGPLG*
Ga0137391_1078534223300011270Vadose Zone SoilILVRATLFVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDEPEGGPLG*
Ga0137399_1141070623300012203Vadose Zone SoilLYILIQATEYVTALESPLQRTGAMAAEILLGVVLLLGTVWLATHLAVRIFTPKESPSEGGPVA*
Ga0126369_1317148123300012971Tropical Forest SoilRAGSMAAELLLGVLLLLGTVWLATHLAVLIFAPKQTPPDGGPLG*
Ga0181539_132689123300014151BogRATLYVTSIASPLPRAGAIAAEILLGVVLLLGTVWLATHLAVLIFAPKQNPPEGGTLG*
Ga0181533_131542413300014152BogIASPLPRAGAIAAEILLGVVLLLGTVWLATHLAVLIFAPKQNPPEGGTLG*
Ga0181533_132901423300014152BogPRAGAIAAEILLGVVLLLGTVWLATHLAVLIFAPKQNPPEGGTLG*
Ga0181526_1001727013300014200BogYVISIDSPLQRAAAIAVEILLGIVLLLGTVWLATHLAVLIFAPKHNPPEGGKLG*
Ga0182027_1000644213300014839FenLERATVYVTSIASPLPRAGAIAAEILLGVILLLGTVWLATHLAVLIFAPKHNPPEGGTLG
Ga0182036_1107174713300016270SoilMVILVRATDYVVRIESPLARAGAIAAEILLGVVLLLGTVWLATHFAVLIFGPKPNSREGDRLG
Ga0182036_1159451813300016270SoilIVAEILLGVVLLLGTVWLATHVAVKIFAPKDDAPEGGPLG
Ga0182033_1022832023300016319SoilTAIQSPLPRAGAMAAELLLGVVLLLGTVWMATHLAVLIFAPKQTPPNGGPLG
Ga0182037_1153519113300016404SoilAIQSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0181511_106801213300016702PeatlandAMVILVRATLYVTAIDSPLPRGGAIAAEILLGVVLLLGTVWLATHLAVLIFAPKSNSPDGGHLG
Ga0187818_1032375823300017823Freshwater SedimentIASPLPRAEAIAAEILLGVVILLGTVWLATHLAVLIFAPKYNPPEGGARG
Ga0187803_1018218023300017934Freshwater SedimentLYVTSIASPLPRAGAIAAEILLGVVLLLGTVWLATHLAVLIFAPKYNPPEGGARG
Ga0187803_1047488723300017934Freshwater SedimentTLSAMVILERATLYVTSIASPLPRAGAIAAELLLGVILLLGTVWLATHLAVLIFAPKHHPPEGGTLG
Ga0187785_1006346913300017947Tropical PeatlandQSPLARAGAIVAEILLGVVLLLGTVWLATHVAVKTFAPKDDAPVGGPLG
Ga0187817_1088716723300017955Freshwater SedimentLYVTSIASPLQRAGAIAAEILLGVILLLGTVWLATHLAVLIFAPKHNPPEGGKLG
Ga0187817_1097398913300017955Freshwater SedimentMTLSAMVILVRATLTVTSIESPLPRAGAIAAEILLGVVLLLGTVWLATHLAVLIFAPKSTSSDGGPLG
Ga0187779_1008178523300017959Tropical PeatlandLYVTEIESPLPRAGAMAAELLLGVILLLGTVWLATHLAVLIFGPKSSSSDGGQVG
Ga0187887_1046455823300018043PeatlandPLQRAAAIAMEILLGIVLLLGTVWLATHLAVLIFAPKHNPPEGGKLG
Ga0187773_1014273723300018064Tropical PeatlandLKLAAAIAAEILLGVVLLLGTVWLATHLAVLIFAPKHASEGGRLG
Ga0187769_1051382423300018086Tropical PeatlandMVILVRATLYVTSIASPLARAGAMVAELLLGVVLLLGTVWLATHLAVLIFAPKSHPSSDGGPLG
Ga0187771_1065559323300018088Tropical PeatlandSIASPLPRAAAIAAEILLGVILLLGTVWLATHLAVLIFAPKNHPPEGGELG
Ga0182028_112847513300019788FenVTSIASPLPRAGAIAAEILLGVILLLGTVWLATHLAVLIFAPKHNPPEGGTLG
Ga0210407_1044532923300020579SoilDSPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDAPKGGPLG
Ga0210399_1016405523300020581SoilMVSLVRATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDKPEGGPLG
Ga0210406_1002095873300021168SoilLLGVVLLLGTVWLATHAAVLIFAPKSDEPEGGPLG
Ga0210406_1020123223300021168SoilVRATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDKPEGGPLG
Ga0210406_1052338013300021168SoilPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDEPKGGPLG
Ga0210406_1055868523300021168SoilLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDKPEGGPLG
Ga0210406_1110335313300021168SoilVTSIKSPVERAGAIAAEVVLGVVLLLGTVWLATHLAVLIFAPKDEPTNGGPLG
Ga0210397_1014699313300021403SoilVTSIEYPLARAGATAAELLLGVILLLGTVWLATHLAVMIFAPKQESQEGGPVG
Ga0210387_1093140213300021405SoilTLSAMVILVRATLYVTSIDSPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDAPKGGPLG
Ga0210402_1001941653300021478SoilPLARAGAIAAELLLGVILLLGTVWLATHLAVLIFAPKQESKEGGPVG
Ga0210410_1161317723300021479SoilILLGVVLLLGTVWLATHAAVLIFAPKSDKPEGGPFG
Ga0210409_1085818023300021559SoilILAEILLGVVLLLGTVWLATHAAVLIFAPKSDKPEGGPFG
Ga0210409_1087036723300021559SoilSPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDAPDGGPLG
Ga0126371_1142428713300021560Tropical Forest SoilIQSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0228598_107037913300024227RhizosphereVTAIESPLPRAGAMAAEMLLGVVLLLGTVWLATHLAVIIFAPKPTPSDGGRLG
Ga0207665_1016334413300025939Corn, Switchgrass And Miscanthus RhizosphereSIKSPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKTDEPEGGPLG
Ga0209240_123375213300026304Grasslands SoilAILAEILLGVVLLLGTVWLATHAAVLIFAPKTDEPEGGPLG
Ga0179587_1057296113300026557Vadose Zone SoilALESPLQRTGAMAAEILLGVVLLLGTVWLATHLAVRIFTPKESPSEGGPVA
Ga0207724_101269023300026862Tropical Forest SoilTEIESPLKRAGAIAAEILLGVILLLGTVWLATHLAVLLFASKPSSPDGGKVG
Ga0207860_102556613300026921Tropical Forest SoilTLYVTEIESPLKRAGAIAAEILLGVILLLGTVWLATHLAVLLFASKPSSPDGGKVG
Ga0207839_104222513300027010Tropical Forest SoilLIVAMTLCAMVILVRATLYVTSIESPLQRAGAVGAELLLGVVLLLGTVWLATHLAVLIFAPKQDSTN
Ga0207740_101066623300027011Tropical Forest SoilSAMVILVRATLYVTEIESPLKRAGAIAAEILLGVILLLGTVWLATHLAVLLFASKPSSPDGGKVG
Ga0207766_104140013300027042Tropical Forest SoilVRATLYVTSIESPLQRAGAVGAELLLGVVLLLGTVWLATHLAVLIFAPKQDSTN
Ga0209523_113069913300027548Forest SoilIESPLPRAGAILAEILLGVVLLLGTVWLATHASVLIFAPKSDEPEGGPLG
Ga0209422_100435353300027629Forest SoilLGILRTNATLSAMVILVRATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDEPEGGPLG
Ga0209139_1026341113300027795Bog Forest SoilMAILVRATLFVTSIESPLQRAGAIAAELLLGVVLLVGTVWLATHLAVLIFAPKQDPNDGGFLG
Ga0209040_1051283413300027824Bog Forest SoilSAMVILVRATLYVTSIEAPLPRAGAIAAEILLGVVLLLGTVWLATHAAVLIFAPKNDEPKGGPLG
Ga0209580_1019102923300027842Surface SoilGAILAEILLGVVLLLGTVWLATHASVLIFAPKSDEPKGGPLG
Ga0209180_1074076923300027846Vadose Zone SoilSPLPPALAIAAELLLGVILLLGTVWLATHLAVRIYGRKDTSPPGGPIA
Ga0310038_1013471523300030707Peatlands SoilATLYVISIDSPLQRAAAIALEILLGIVLLLGTVWLATHLAVLIFAPKHNPPEGGKLG
Ga0170824_11429096513300031231Forest SoilVMVILVRATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDEPEGGPLG
Ga0170824_12891901923300031231Forest SoilVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDKPEGGPLG
Ga0318541_1087696023300031545SoilMTLSAMVILVRATLYVSAIHSPLPRAGAMAAELLLGVILLLGTVWLATHLAVLIFAPKQTPPDGGPLG
Ga0318571_1009249023300031549SoilTLSAMVILVRATLYVTAIQSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0310915_1083577223300031573SoilILILVRATHYVTSVESPLPRAGAIAAELLLGVVLLLGTVWLATHLAVLIFAPKSTSSDGGPLG
Ga0318542_1004368113300031668SoilAMVILVRATLYVTAIQSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0306918_1108715423300031744SoilLVRATLYVTAIHSPLPRAGAMVAELLLGVVLLLGTVWLATHLAVLIFAPKQNQTPSDGGPLG
Ga0307475_1133025813300031754Hardwood Forest SoilFVTSIQSPLPRAGAILAEIFLGVVLLLGTVWLATHAAVLIFAPKSDEPEGGPLG
Ga0318537_1029865923300031763SoilATLYVTAIQSRLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0318547_1098086123300031781SoilAGAIAAEILLGVVLLLGTVWLATHFAVLIFGPKPNSREGDRLG
Ga0318552_1066271213300031782SoilVTSIESPLVLAGAIAAELLLGVVLLLGTVWLATHLAVLIFAPRHNPADGGSLG
Ga0307473_1093002313300031820Hardwood Forest SoilATLYVTAIESPLPRAGAIAAEILLGVVLLVGTVWLATHLAVLIFAPKPPPTPGGRLG
Ga0307478_1168836423300031823Hardwood Forest SoilVTAIQSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTSSDGGPLG
Ga0318511_1024889623300031845SoilRATLYVTAIQSRLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0306925_1164835823300031890SoilPLPRAGAIVAEILLGVVLLLGTVWLATHVAVKIFAPKDDAPEGGPLG
Ga0318551_1085700013300031896SoilLYVTAIHSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFGPKQIPPNGGPLG
Ga0318520_1084933023300031897SoilAIAAEILLGVVLLLGTVWLATHFAVLIFGPKPNSREGDRLG
Ga0310913_1026741023300031945SoilMVILVRATLYVTEIESPLTRAGAIAAEILLGVILLLGTVWLATHLAVLLFAPKSASSDGGPVG
Ga0310910_1057970013300031946SoilLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0310909_1013865023300031947SoilSAMVILVRATLYVTAIHSPLPRAGAMVAELLLGVVLLLGTVWLATHLAVLIFAPKQNQTPSDGGPLG
Ga0310909_1167715413300031947SoilAIAAELLLGVVLLLGTVWLATHLAVLIFAPKSTSSDGGPLG
Ga0306926_1109014923300031954SoilTSIESPLGRAGAIVAELLLGVILLLGTVWLATHLAVLIFAPKSHPSEGGPLA
Ga0307479_1075417513300031962Hardwood Forest SoilAGAILAEILLGVVLLLGTVWLATHAAVLIFAPKSDEPEGGPLG
Ga0318533_1058956513300032059SoilTLYVTAIQSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0318505_1033679013300032060SoilAIHSPLPRAGAMAVELLLGVVLLLGTVWLATHLAVLIFAPKQTPPDGGPLG
Ga0318518_1042022523300032090SoilAIQSRLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTPPNGGPLG
Ga0318540_1065434423300032094SoilESPLARAGAIAAEILLGVVLLLGTVWLATHFAVLIFGPKPNSREGDRLG
Ga0307471_10234105323300032180Hardwood Forest SoilMVILVQATLYVTAIQSPLPRAGAMAAEILLGVVLLVGTVWLATHLAVLIFAPKPPSSTGGRLG
Ga0335078_1076141823300032805SoilLQRAGAIAAEILLGVVLLLGTVWLATHLAVLIFAPKSNSPDGGGLG
Ga0335083_1021377313300032954SoilLSAMVILVRATLYVTAIESPLMRAGAIAAELLLGVVLLLGTVWLATHLAVLIFAPKTNPSEGGPLG
Ga0335077_1011076913300033158SoilAAAIAAEILLGVVLLLGTVWLATHLAVLIFAPKHPSPDGGRLG
Ga0326727_1017335113300033405Peat SoilLYVISIESPWQRAGAIAAEILLGIILLLGTVWLATHLAVLIFAPKRNPPEGGKLG
Ga0371490_117956413300033561Peat SoilVILVRATLYVTAIQSPLPRAGAMAAELLLGVVLLLGTVWLATHLAVLIFAPKPTSPDGGRLG
Ga0334818_072049_341_5203300033821SoilERATVYVTSIASPLPRAGAIAAEILLGVILLLGTVWLATHLAVLIFAPKHNPPEGGTLG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.