Basic Information | |
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Family ID | F103666 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 101 |
Average Sequence Length | 61 residues |
Representative Sequence | ARYEASNMSYRFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA |
Number of Associated Samples | 92 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 1.98 % |
% of genes from short scaffolds (< 2000 bps) | 0.99 % |
Associated GOLD sequencing projects | 87 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.49 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (99.010 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (12.871 % of family members) |
Environment Ontology (ENVO) | Unclassified (29.703 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (47.525 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 3.66% β-sheet: 39.02% Coil/Unstructured: 57.32% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.49 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 101 Family Scaffolds |
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PF09537 | DUF2383 | 33.66 |
PF00296 | Bac_luciferase | 9.90 |
PF13669 | Glyoxalase_4 | 9.90 |
PF13282 | DUF4070 | 3.96 |
PF01124 | MAPEG | 0.99 |
PF13742 | tRNA_anti_2 | 0.99 |
PF13847 | Methyltransf_31 | 0.99 |
PF13442 | Cytochrome_CBB3 | 0.99 |
PF01145 | Band_7 | 0.99 |
PF02826 | 2-Hacid_dh_C | 0.99 |
PF13229 | Beta_helix | 0.99 |
PF01053 | Cys_Met_Meta_PP | 0.99 |
PF02668 | TauD | 0.99 |
PF12706 | Lactamase_B_2 | 0.99 |
PF09297 | zf-NADH-PPase | 0.99 |
PF01850 | PIN | 0.99 |
PF01872 | RibD_C | 0.99 |
PF00753 | Lactamase_B | 0.99 |
COG ID | Name | Functional Category | % Frequency in 101 Family Scaffolds |
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COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 9.90 |
COG0075 | Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG | Amino acid transport and metabolism [E] | 0.99 |
COG0156 | 7-keto-8-aminopelargonate synthetase or related enzyme | Coenzyme transport and metabolism [H] | 0.99 |
COG0262 | Dihydrofolate reductase | Coenzyme transport and metabolism [H] | 0.99 |
COG0272 | NAD-dependent DNA ligase | Replication, recombination and repair [L] | 0.99 |
COG0399 | dTDP-4-amino-4,6-dideoxygalactose transaminase | Cell wall/membrane/envelope biogenesis [M] | 0.99 |
COG0436 | Aspartate/methionine/tyrosine aminotransferase | Amino acid transport and metabolism [E] | 0.99 |
COG0520 | Selenocysteine lyase/Cysteine desulfurase | Amino acid transport and metabolism [E] | 0.99 |
COG0626 | Cystathionine beta-lyase/cystathionine gamma-synthase | Amino acid transport and metabolism [E] | 0.99 |
COG1921 | Seryl-tRNA(Sec) selenium transferase | Translation, ribosomal structure and biogenesis [J] | 0.99 |
COG1982 | Arginine/lysine/ornithine decarboxylase | Amino acid transport and metabolism [E] | 0.99 |
COG1985 | Pyrimidine reductase, riboflavin biosynthesis | Coenzyme transport and metabolism [H] | 0.99 |
COG2008 | Threonine aldolase | Amino acid transport and metabolism [E] | 0.99 |
COG2175 | Taurine dioxygenase, alpha-ketoglutarate-dependent | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.99 |
COG2816 | NADH pyrophosphatase NudC, Nudix superfamily | Nucleotide transport and metabolism [F] | 0.99 |
COG2873 | O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent | Amino acid transport and metabolism [E] | 0.99 |
COG4100 | Cystathionine beta-lyase family protein involved in aluminum resistance | Inorganic ion transport and metabolism [P] | 0.99 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 99.01 % |
All Organisms | root | All Organisms | 0.99 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300012200|Ga0137382_10330606 | Not Available | 1067 | Open in IMG/M |
3300028906|Ga0308309_10124012 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2040 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 12.87% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 11.88% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 5.94% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.94% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 5.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.96% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 3.96% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 2.97% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 2.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.97% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 2.97% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.97% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.98% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.98% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.98% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.98% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 1.98% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.98% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 1.98% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.98% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.99% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.99% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.99% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.99% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.99% |
Permafrost | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost | 0.99% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.99% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.99% |
Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.99% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.99% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.99% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 0.99% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.99% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.99% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.99% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.99% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.99% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.99% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.99% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005171 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 | Environmental | Open in IMG/M |
3300005175 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 | Environmental | Open in IMG/M |
3300005176 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 | Environmental | Open in IMG/M |
3300005179 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 | Environmental | Open in IMG/M |
3300005184 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 | Environmental | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005450 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 | Environmental | Open in IMG/M |
3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Environmental | Open in IMG/M |
3300005529 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1 | Environmental | Open in IMG/M |
3300005534 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 | Environmental | Open in IMG/M |
3300005540 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 | Environmental | Open in IMG/M |
3300005542 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 | Environmental | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
3300005566 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 | Environmental | Open in IMG/M |
3300005574 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 | Environmental | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010364 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015 | Environmental | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012906 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1 | Environmental | Open in IMG/M |
3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300014052 | Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M | Environmental | Open in IMG/M |
3300015241 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
3300017974 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG | Environmental | Open in IMG/M |
3300018061 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1 | Environmental | Open in IMG/M |
3300018085 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018088 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG | Environmental | Open in IMG/M |
3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300019786 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction) | Environmental | Open in IMG/M |
3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
3300021441 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 | Host-Associated | Open in IMG/M |
3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026312 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes) | Environmental | Open in IMG/M |
3300026547 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes) | Environmental | Open in IMG/M |
3300026550 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes) | Environmental | Open in IMG/M |
3300027817 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes) | Environmental | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032782 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1 | Environmental | Open in IMG/M |
3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
3300033158 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI10216J12902_1129293631 | 3300000956 | Soil | FGSRYEASNISYRFEGRVSDGAMTGTVLLGAASDQNAGIVNRSQFGAGAWEARRVA* |
Ga0062590_1015211222 | 3300004157 | Soil | ISYRFEGRVSDGAMAGTVQLGAASDQNSGLVNRTQFGAGAWEARRVA* |
Ga0062594_1021919662 | 3300005093 | Soil | HEAATISYRFEGSVADGEMEGTVLLGAASDQNQGIVNRTQFGAGSWEARRLT* |
Ga0066677_104554022 | 3300005171 | Soil | SYRFEGTVEDGAMAGTVALGAASDQNAGIVNRSQFGSGQWQARRVA* |
Ga0066673_105536523 | 3300005175 | Soil | ASNMSYRFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0066679_106832663 | 3300005176 | Soil | ARYEASNMSYRFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0066684_104982601 | 3300005179 | Soil | GPVSGALDGDTIRFSFGGRYDASNLSYRFEGRVSDGAMAGTVELGAASDTSNGIVNRSQFGSGEWQARRLA* |
Ga0066671_102525783 | 3300005184 | Soil | YEASNMSYRFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0066671_104943891 | 3300005184 | Soil | YDASNLSYRFEGRISDGAMAGTVELGAASDQNGGVVNRSQFGSGEWQARRIA* |
Ga0070680_1013739781 | 3300005336 | Corn Rhizosphere | EASSISYRFTGKIRDGLMAGTVLLGAASDQNSGIVNRTQFGTGDWEARRVG* |
Ga0070691_107565052 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | YEASNISYRFEGRVSDGAMAGTVLLGAASDQNSGIVNRSQFGAGSWQAQRIA* |
Ga0070671_1011998762 | 3300005355 | Switchgrass Rhizosphere | VEGALDGDTVRFAFGGRYEASNISYRFEGRVSDGAMAGTVQLGAASDQNSGVVNRTQFGAGAWEARRLA* |
Ga0070688_1002999353 | 3300005365 | Switchgrass Rhizosphere | EGPVTGAIEADAIRFSFTSRYEASNISYRFEGKVQDGRMSGTVDLGAASDQNSGVVNRSQFGSGEWEARRVA* |
Ga0070713_1003738603 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | PLQGVLDGDTVRFSFGARYEASNMSYRFEGRVSNGTMEGTVELGAASDQNAGIVNRTQFGSGAWQARRLG* |
Ga0070713_1018284441 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | PLQGVLDGDTVRFSFGARYEASNMSYRFEGRVSNGTMEGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0066682_108963361 | 3300005450 | Soil | GRYEASNLAYCFEGRVEDGAMAGTVELGAASDQNGGIVNRSQFGAGEWQARRVA* |
Ga0070681_116767802 | 3300005458 | Corn Rhizosphere | GRYEASNISYRFEGRVANGGMAGTVLLGAASDQNSGVVNRTQFGAGEWEARRVA* |
Ga0070741_109104981 | 3300005529 | Surface Soil | HEAATISYRFDGRVADGAMEGTVLLGAASDQNQGIVNRTQFGAGSWRAHRLG* |
Ga0070735_109316442 | 3300005534 | Surface Soil | FAGRYEASTLSYRFDGRVAGGMMSGTVALGAASDQNAGLVNRSQFGAGQWQARRQG* |
Ga0066697_103683731 | 3300005540 | Soil | GVLDGDTVRFSFGARYEASNMSYRFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0070732_104688981 | 3300005542 | Surface Soil | AFGGRYEAATISFRFEGKVGDGAMSGLVELGAASDQNSGIVNRSQFGTGE* |
Ga0070695_1016728661 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | FDGPLQGVLDGDTVRFSFGARYEASNMSYRFEGRVSNGTMEGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0068855_1009374863 | 3300005563 | Corn Rhizosphere | FDGPVEGTVDGERVRFWFGGRYEASNIYYRFEGRVSDGAMAGTVLLGAASDQNSGIVNRSQFGPGAWEARRVA* |
Ga0066693_100796533 | 3300005566 | Soil | QFEGPLQGVLDGDTVRFSFGARYEASNMSYRFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0066694_104909241 | 3300005574 | Soil | ASNLSYRFEGRVSDGAMAGTVELGAASDTSNGIVNRSQFGSGEWQARRLA* |
Ga0068856_1000323671 | 3300005614 | Corn Rhizosphere | GDTVRFSFGARYEASNMSYRFEGRVSNGTMEGTVELGAASDQNAGIVNRTQFGSGAWQARRLG* |
Ga0070766_102221711 | 3300005921 | Soil | GPVTGSLDADLIRFSFADRYEASNLSYCFEGRIQNGAMAGTVELGAASDQNGGVVNRGQFGTGEWQARRIAGG* |
Ga0066696_103178411 | 3300006032 | Soil | SYRFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLG* |
Ga0070712_1006095151 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | GARYEASNMSYRFEGRVSNGTMEGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0070712_1007014421 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | DGDTVRFSFGGRYDASNLSYRFEGRVSDGAMAGTVELGAASDTSNGIVNRSQFGSGEWQARRLA* |
Ga0075424_1023777632 | 3300006904 | Populus Rhizosphere | SYRFEGRVRNGTMEGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0079219_112926981 | 3300006954 | Agricultural Soil | DTVRFSFGARYEASNMSYRFEGRVSNGTMEGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0066710_1026837621 | 3300009012 | Grasslands Soil | DGPVTGSLDADVIRFSFAGRYEGSNLSYCFEGRVQNGAMAGTVELGAASDQNSGIVNRSQFGSGEWQAKRTA |
Ga0066710_1042622862 | 3300009012 | Grasslands Soil | DGPVTGSLDADVIRFSFAGRYEGSNLSYCFEGRVQNGAMAGTVELGAASDQNGGIVNRSQFGSGEWQAWRVA |
Ga0099830_107132922 | 3300009088 | Vadose Zone Soil | FEGPVTGTLEADLICFSFGSRHEASNLSYRFEGTVAGGEMGGTVALGAASDQNAGIVNRSQFGSGQWQARRVMR* |
Ga0099827_119511702 | 3300009090 | Vadose Zone Soil | IRFSFDGRYEASTISYRFEGTVGDGAMAGTVKLGAASDQNQGIVNRSQFGSGRWEPSRVT |
Ga0066709_1033610602 | 3300009137 | Grasslands Soil | GALEADVIQFSFGGRYEASNISYRFEGRVRDGAMAGTVLLGAASDQNAGIVNKSQFGAGEWQARRIA* |
Ga0126313_116966542 | 3300009840 | Serpentine Soil | FTGRHEAATISYCFEGSVADGEMAGTVLLGAASDQNQGIVNRTEFGAGSWQACRLA* |
Ga0126308_107434331 | 3300010040 | Serpentine Soil | HFSFGSRYEASNLSYRFEGRVSDGTMAGTVLLGAASDQNSGIVNRSQFGSGEWHARRLG* |
Ga0126310_113321092 | 3300010044 | Serpentine Soil | VAAVDGEIDADRVRFAFTGRHEAATISYRFEGSVADGEMAGTVLLGAASDQNQGIVNRTQFGAGSWQARRLA* |
Ga0126372_113235692 | 3300010360 | Tropical Forest Soil | VEGALDGDTVRFSFGARYEASNMSYWFEGRVAKGTMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0134066_103772881 | 3300010364 | Grasslands Soil | RFEGRVSNGTMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0126381_1038866841 | 3300010376 | Tropical Forest Soil | PVFDGPIEGALDGDTVRFSFGTRYEASNMSYRFEGRVSDGTLAGTVELGAASAQNAGLVNRTQFGSGAWQARRLA* |
Ga0137392_108847242 | 3300011269 | Vadose Zone Soil | LRANESAAASSTVALGAASDQNGGIVNRSQFGGGEWQARRLA* |
Ga0137383_107320311 | 3300012199 | Vadose Zone Soil | YCFEGRVQDGAMAGTVELGAASDQNGGIVNRSQFGAGEWQARRVA* |
Ga0137382_103306061 | 3300012200 | Vadose Zone Soil | VTGSLDADVIRFSFAGRYEASNLSYCFEGRVQDGAMAGTVELGAASDQNGGIVNRSQFGAGEWQARRLA* |
Ga0137362_103028061 | 3300012205 | Vadose Zone Soil | EADLIRFSFGSRYEASNLSYRFEGTVADGEMGGTVALGAASDQNAGVVNRSQFGTGEWQARRVM* |
Ga0137381_110784141 | 3300012207 | Vadose Zone Soil | LDADMIRFTFDGRYEASTISYRFEGKVGDGAMAGTVVLGAASDQNAGIVNRSQFGTGKWQARRVT* |
Ga0150985_1035142062 | 3300012212 | Avena Fatua Rhizosphere | VEGTLNGEAIRFAFGGRYEASNISYRFEGRVSDGAMAGTVLLGAASDQNAGLVNRSQFGAGAWEARRVA* |
Ga0150985_1158962911 | 3300012212 | Avena Fatua Rhizosphere | LDRDTVRFSFGARYEASNMSYRFQGRVSDGAMAGTVELGAPSDQNAGIVNRTQFGSGAWQARRVT* |
Ga0137390_117946272 | 3300012363 | Vadose Zone Soil | DADRVSFSFGNRHEASNLSYRFEGTVEDGAMAGTVALGAASDQNAGIVNRSQFGTGQWQARRVA* |
Ga0150984_1202324713 | 3300012469 | Avena Fatua Rhizosphere | GEIDADRIRLAFAGRHEAATISYLFEGRVAEGEMTGTVLLGAASDQNQGIVNRTQFGAGSWQARRLA* |
Ga0157295_103811252 | 3300012906 | Soil | VSGAIDFDHIRLAFEGRHEAATISYCFEGRIAAGEMEGTVLLGAASDQNQGIVNRTQFGAGSWRARRLT* |
Ga0137395_110421482 | 3300012917 | Vadose Zone Soil | GAINGSARCGGRVADGAMAGIVALGAASDQNAGIVNRSQFGAGQWQARRVA* |
Ga0137416_113268882 | 3300012927 | Vadose Zone Soil | ADLIRFSFGSRYEASNLSYRFEGTVADGEMGGTVALGAASDQNAGVVNRSQFGTGQWQARRLA* |
Ga0164306_112634762 | 3300012988 | Soil | AGTLDADVIRFSFGGRYEASTMSYRFEGKVADGAMAGTVLLGAASDQNQGIVNRTQFGAGSWQARRLA* |
Ga0164305_111260471 | 3300012989 | Soil | LDGDTVRFSFGARYEASNMSYRFQGRVSDGTMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0120109_10881782 | 3300014052 | Permafrost | GGAGAGWRRGRYEAATISFYFEGQVGDGAMSGKVELGAASDQNSGIVNRSQFGAGQWQAHRVD* |
Ga0137418_102583594 | 3300015241 | Vadose Zone Soil | AVEADRVRFAFDGRHEAAILSFRFEGKVANGTMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA* |
Ga0132255_1032422041 | 3300015374 | Arabidopsis Rhizosphere | NISYRFEGRVSDGAMAGTVLLGAASDQNSGVVNRTQFGAGAWEARRLA* |
Ga0132255_1049977522 | 3300015374 | Arabidopsis Rhizosphere | EQFEGPVDGEIDADRVRFAFTGRHEAATISYRFEGSVADGEMAGTVLLGAASDQNQGIVNRTQFGAGSWEARRLT* |
Ga0187817_105018502 | 3300017955 | Freshwater Sediment | FGGRYEAATISFRFEGKIRNGAMSGIVELGAASDQNNGIVNRSQFGAGEWRARRVA |
Ga0187777_103083824 | 3300017974 | Tropical Peatland | NLSYRFEGRVADGAMGGTVVLGAASDQNAGLVNRSQFGSGTWQARRTA |
Ga0184619_105557031 | 3300018061 | Groundwater Sediment | RFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA |
Ga0187772_103708922 | 3300018085 | Tropical Peatland | EASNISFNFEGQVRNGAMSGTVELGAASDQNSGVVNRSQFGSGEWHAKRVA |
Ga0187771_109948013 | 3300018088 | Tropical Peatland | LIRFAFTGRYEASTISYRFEGRVADGAMAGTVQLGAASDQNAGIVNKSQFGAGEWQARRI |
Ga0066662_100894161 | 3300018468 | Grasslands Soil | GVLDGDTVRFSFGARYEASNMSYRFEGRVSDGAMVGTVELGAASDQNAGIVNRTQFGSGAWQARRLA |
Ga0066669_102925091 | 3300018482 | Grasslands Soil | QFEGPLQGVLDGDTVRFSFGARYEASNMSYRFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGSGAWQARRLA |
Ga0066669_104649441 | 3300018482 | Grasslands Soil | SNLSYRFEGRVSDGTMAGTVELGAASDTSNGIVNRSQFGSGAWEARRLA |
Ga0182025_13802254 | 3300019786 | Permafrost | MSYRFEGRVKDGRMNGTVALGAASDQNSGLVNRTQFGMGEWSARRVA |
Ga0206353_111852072 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | FGGRYEASNISYRFEGRVSDGAMAGTVLLGAASDQNSGIVNRSQFGPGAWEARRVA |
Ga0210393_115435801 | 3300021401 | Soil | FAFGGRYEAATISFRFEGRVGDGAMSGTVELGAASDQNSGIVNRSQFGIGEWRARRVA |
Ga0210383_109146441 | 3300021407 | Soil | ASKLSYRFEGRLKDGAMAGTVMLGAASDQNGGVVNRSQFGAGEWRAKRVA |
Ga0213871_101832042 | 3300021441 | Rhizosphere | VEADRIAFAFEARHEGSRISYRFDGRVADGRMSGTVALGANSEQSPGIVNRSQFGEGRWQASRVG |
Ga0210398_110885471 | 3300021477 | Soil | RFEGRLKDGAMEGIVKLGAASDQNSGIVNRTQFGTGEWRAKRVA |
Ga0207660_110752001 | 3300025917 | Corn Rhizosphere | GRFEASSISYRFTGKIRDGLMAGTVLLGAASDQNSGIVNRTQFGTGDWEARRVG |
Ga0207701_107120051 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | QFEGPVEGALDGEAIRFSFGGRYEASNISYRFEGRVSDGAMAGTVLLGAASDQNSGVVNRTQFGAGEWEARRVA |
Ga0207690_118769182 | 3300025932 | Corn Rhizosphere | RHEAATISYRFEGSVADGEMSGTVMLGAASDQNQGIVNRTQFGAGSWEARRLT |
Ga0207712_111847082 | 3300025961 | Switchgrass Rhizosphere | QHSEQFEGPVSGEIDGDRICFAFAGRHEAATLSYRFEGSVADGKMEGTVLLGAASDQNQGIVNRSQFGSGRWRASRMARG |
Ga0207702_101141735 | 3300026078 | Corn Rhizosphere | RSAQFDGPLQGVLDGDTVRFSFGARYEASNMSYRFEGRVSNGTMVGTVELGAASDQNAGIVNRTQFGSGAWQARRLG |
Ga0207702_119762901 | 3300026078 | Corn Rhizosphere | RLAFEGRHEAATISYRFDGRVTEGAMEGTVLLGAASDQNQGIVNRTQFGAGSWRARRVG |
Ga0207674_105995464 | 3300026116 | Corn Rhizosphere | VRFAFTGRHEAATISYRFEGIVVNGEMTGTVLLGAASDQNQGIVNCTQFGGGSWRARRVA |
Ga0207675_1022497081 | 3300026118 | Switchgrass Rhizosphere | VRFWFGGRYEASNISYRFEGRVANGGMAGTVLLGAASDQNGGVVNRTQFGAGEWEARRVA |
Ga0207683_108724351 | 3300026121 | Miscanthus Rhizosphere | DGDRVRFAFGSRYEASNISYRFEGRVGDGAMSGTVLLGAASDQNSGVVNRTQFGAGAWEARRLA |
Ga0207698_119023972 | 3300026142 | Corn Rhizosphere | VRFWFGGRYEASNISYRFEGRVSDGAMAGTVLLGAASDQNSGVVNRSQFGPGAWEARRVA |
Ga0209153_12932441 | 3300026312 | Soil | FGFGARYEASNMSYRFEGRVSDGAMAGTVELGAASDQNAGIVNRTQFGNGAWQARRLA |
Ga0209156_103093162 | 3300026547 | Soil | GALEGDTVRFSFGGRYDASNLSYRFEGRVSDGAMAGTVELGAASDTSNGIVNRSQFGSGEWQARRLA |
Ga0209474_107604671 | 3300026550 | Soil | PVEGALDGDTVRFSFGSRYEASNLSYRFEGRVSDGTMGGTVMLGAASDQNSGIVNKSQFGTGEWQARRVG |
Ga0209112_103673072 | 3300027817 | Forest Soil | EASNLSYRFEGRLKDGAMAGTVMLGAASDQNSGIVNRTQFGAGEWRAHRV |
Ga0268266_119207802 | 3300028379 | Switchgrass Rhizosphere | GEIDGDRICFTFAGRHEAATISNRFDGHVANGHMEGTVLLGAASDQNQGIVNRTQFGAGSWEARRLA |
Ga0137415_104789823 | 3300028536 | Vadose Zone Soil | SFGSRYEASNLSYRFEGTVADGEMGGTVALGAASDQNAGVVNRSQFGTGQWQARRLA |
Ga0308309_101240124 | 3300028906 | Soil | GPVTGSLDADVIRFSFAGRYEASNLSYCFEGRVQNGAMAGTVELGAASDQNGGVVNRSQFGTGEWQARRIA |
Ga0170818_1132434112 | 3300031474 | Forest Soil | VEADMIRFTFDGRYEASTISYRFEGKVADGAMAGTVLLGAASDQNSGIVNRSQFGTGEWQARRVA |
Ga0302326_134965822 | 3300031525 | Palsa | AQFDGPVEGAIEADIVRFWFQQRYEASNLSYRFEGKIADGAMAGTVMLGAASDQNGGIVNRGQFGAGEWQAKRVA |
Ga0310686_1105682331 | 3300031708 | Soil | SSFGGRYEASNLSYLFEGKLRDGAMSGTVHLGAASDQNSGIVNKSQFGSGEWEARRVA |
Ga0307477_108269011 | 3300031753 | Hardwood Forest Soil | GALDGDAIRFSFGQRYEASNLSYRFEGRVKNGSMGGTVHLGAASDQNSGIVNKSQFGAGEWQARRVA |
Ga0307479_110595231 | 3300031962 | Hardwood Forest Soil | AQFAGPVKGAIEEDRIRFAFDGRYEASTMSFRFEGRVADGAMAGTVALGAASDQNQGIVNRSQFGSGAWQARRVD |
Ga0335082_105665713 | 3300032782 | Soil | EGSLDGATIRFSFAGRYEASNLSYRFEGRVADGAMAGTVALGAASDQNSGLVNRSQFGTGTWQAQRLS |
Ga0335081_101834931 | 3300032892 | Soil | YEAATISFHFEGRVAGGAMAGTVALGAASDQNSGIVNRSQFGAGEWRARRVA |
Ga0335081_104680534 | 3300032892 | Soil | FGGRYEASNLSYRFEGRVGDGAMAGTVVLGAASDQNAGLVNRSQFGSGTWQARRIA |
Ga0335077_116639051 | 3300033158 | Soil | GESVRFSFGGRYEAATISFHFEGRVAGGAMAGTVALGAASDQNSGIVNRSQFGAGEWRARRVA |
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