NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103641

Metagenome / Metatranscriptome Family F103641

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103641
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 67 residues
Representative Sequence VVVGLHVRNWHFFETYKRTICVDIRSQRTIFRCAGTFKPNNSSWWERLLAVLRIRKVKAIVI
Number of Associated Samples 86
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.00 %
% of genes near scaffold ends (potentially truncated) 96.04 %
% of genes from short scaffolds (< 2000 bps) 94.06 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.020 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(14.852 % of family members)
Environment Ontology (ENVO) Unclassified
(30.693 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.525 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.11%    β-sheet: 28.89%    Coil/Unstructured: 60.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF02036SCP2 8.91
PF01699Na_Ca_ex 2.97
PF03976PPK2 1.98
PF03458Gly_transporter 1.98
PF11742DUF3302 1.98
PF00072Response_reg 0.99
PF00248Aldo_ket_red 0.99
PF12697Abhydrolase_6 0.99
PF07883Cupin_2 0.99
PF00484Pro_CA 0.99
PF00155Aminotran_1_2 0.99
PF04909Amidohydro_2 0.99
PF14534DUF4440 0.99
PF13533Biotin_lipoyl_2 0.99
PF02518HATPase_c 0.99
PF104171-cysPrx_C 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0387Cation (Ca2+/Na+/K+)/H+ antiporter ChaAInorganic ion transport and metabolism [P] 2.97
COG0530Ca2+/Na+ antiporterInorganic ion transport and metabolism [P] 2.97
COG2326Polyphosphate kinase 2, PPK2 familyEnergy production and conversion [C] 1.98
COG2860Uncharacterized membrane protein YeiHFunction unknown [S] 1.98
COG0288Carbonic anhydraseInorganic ion transport and metabolism [P] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.02 %
UnclassifiedrootN/A1.98 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459003|FZ032L002HBTXWAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia506Open in IMG/M
2189573000|GPBTN7E02GX1SFAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium500Open in IMG/M
3300000754|JGI11851J11668_1006576All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium522Open in IMG/M
3300002914|JGI25617J43924_10117182All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium941Open in IMG/M
3300002914|JGI25617J43924_10357000All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium507Open in IMG/M
3300004643|Ga0062591_102021537All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium595Open in IMG/M
3300005290|Ga0065712_10285490All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium876Open in IMG/M
3300005293|Ga0065715_10026237All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1357Open in IMG/M
3300005332|Ga0066388_106673333All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia581Open in IMG/M
3300005347|Ga0070668_100576915All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium981Open in IMG/M
3300005353|Ga0070669_100606153All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium918Open in IMG/M
3300005434|Ga0070709_10355484All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1083Open in IMG/M
3300005437|Ga0070710_10303598All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1042Open in IMG/M
3300005451|Ga0066681_10088400All Organisms → cellular organisms → Bacteria1757Open in IMG/M
3300005457|Ga0070662_100396150All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1139Open in IMG/M
3300005468|Ga0070707_100567866All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1097Open in IMG/M
3300005518|Ga0070699_101376656All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia647Open in IMG/M
3300005555|Ga0066692_10844937All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia562Open in IMG/M
3300005558|Ga0066698_11027924All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia523Open in IMG/M
3300005764|Ga0066903_100648565All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1845Open in IMG/M
3300006175|Ga0070712_101296280All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia635Open in IMG/M
3300007255|Ga0099791_10436447All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia632Open in IMG/M
3300009093|Ga0105240_12598128All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium523Open in IMG/M
3300009137|Ga0066709_101576023All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia942Open in IMG/M
3300009143|Ga0099792_10525446All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium744Open in IMG/M
3300009156|Ga0111538_11782662All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia775Open in IMG/M
3300009553|Ga0105249_12834385All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium556Open in IMG/M
3300010304|Ga0134088_10552414All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium570Open in IMG/M
3300010371|Ga0134125_11461699All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium745Open in IMG/M
3300010373|Ga0134128_12536575All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium565Open in IMG/M
3300010375|Ga0105239_10247321All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2003Open in IMG/M
3300010396|Ga0134126_12134374All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium612Open in IMG/M
3300010397|Ga0134124_10930486All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium877Open in IMG/M
3300012198|Ga0137364_10802883All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium711Open in IMG/M
3300012198|Ga0137364_11040823All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium618Open in IMG/M
3300012200|Ga0137382_10511095All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia854Open in IMG/M
3300012201|Ga0137365_10334755All Organisms → cellular organisms → Bacteria1120Open in IMG/M
3300012201|Ga0137365_10920101All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium637Open in IMG/M
3300012202|Ga0137363_11062338All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia688Open in IMG/M
3300012202|Ga0137363_11317715All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium611Open in IMG/M
3300012202|Ga0137363_11451011All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia577Open in IMG/M
3300012210|Ga0137378_10987869All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium756Open in IMG/M
3300012356|Ga0137371_10681113All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium787Open in IMG/M
3300012361|Ga0137360_11214562All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium652Open in IMG/M
3300012897|Ga0157285_10325080All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia531Open in IMG/M
3300012917|Ga0137395_10600365All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia795Open in IMG/M
3300012927|Ga0137416_10657833All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium917Open in IMG/M
3300012951|Ga0164300_10842946All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium573Open in IMG/M
3300012977|Ga0134087_10403433All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium666Open in IMG/M
3300012986|Ga0164304_11253203All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium601Open in IMG/M
3300012988|Ga0164306_10364314All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1075Open in IMG/M
3300013297|Ga0157378_10280471All Organisms → cellular organisms → Bacteria1606Open in IMG/M
3300013308|Ga0157375_11781487All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia730Open in IMG/M
3300014157|Ga0134078_10053488All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1405Open in IMG/M
3300014325|Ga0163163_10782614All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300014968|Ga0157379_11998645All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium573Open in IMG/M
3300015371|Ga0132258_11867098All Organisms → cellular organisms → Bacteria1513Open in IMG/M
3300015372|Ga0132256_100106670All Organisms → cellular organisms → Bacteria2739Open in IMG/M
3300015372|Ga0132256_100343089All Organisms → cellular organisms → Bacteria1586Open in IMG/M
3300015372|Ga0132256_101977160All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium690Open in IMG/M
3300015373|Ga0132257_101467475All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium870Open in IMG/M
3300015374|Ga0132255_100138821All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3371Open in IMG/M
3300015374|Ga0132255_103150554All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia703Open in IMG/M
3300017930|Ga0187825_10032207All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1768Open in IMG/M
3300018000|Ga0184604_10121831All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium833Open in IMG/M
3300018028|Ga0184608_10402503All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium594Open in IMG/M
3300018433|Ga0066667_10178437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1534Open in IMG/M
3300022901|Ga0247788_1110664All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium548Open in IMG/M
3300024279|Ga0247692_1054865All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium619Open in IMG/M
3300024331|Ga0247668_1012836All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1741Open in IMG/M
3300025916|Ga0207663_11327743All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia579Open in IMG/M
3300025920|Ga0207649_10204030All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus1398Open in IMG/M
3300025922|Ga0207646_11218828All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium659Open in IMG/M
3300025930|Ga0207701_10908624All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia737Open in IMG/M
3300025930|Ga0207701_11199587All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium626Open in IMG/M
3300025933|Ga0207706_10072610All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3026Open in IMG/M
3300025939|Ga0207665_10349374All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1116Open in IMG/M
3300026023|Ga0207677_10112480All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2030Open in IMG/M
3300026342|Ga0209057_1119408All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium993Open in IMG/M
3300026551|Ga0209648_10771697All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium525Open in IMG/M
3300026818|Ga0207634_103779All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium597Open in IMG/M
3300030945|Ga0075373_11633895All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300031057|Ga0170834_106596845All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.663Open in IMG/M
3300031128|Ga0170823_11591702All Organisms → cellular organisms → Bacteria → Proteobacteria1375Open in IMG/M
3300031231|Ga0170824_117747405All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium644Open in IMG/M
3300031231|Ga0170824_120262518All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia534Open in IMG/M
3300031446|Ga0170820_16232133All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300031446|Ga0170820_17093231All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia503Open in IMG/M
3300031469|Ga0170819_16942070All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300031474|Ga0170818_104634606All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia508Open in IMG/M
3300031474|Ga0170818_109054293All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium595Open in IMG/M
3300031962|Ga0307479_10557514All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1128Open in IMG/M
3300031962|Ga0307479_11329553All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia679Open in IMG/M
3300032174|Ga0307470_10519496All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium873Open in IMG/M
3300032180|Ga0307471_101572001Not Available814Open in IMG/M
3300032180|Ga0307471_102245153All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium688Open in IMG/M
3300032211|Ga0310896_10254885All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium889Open in IMG/M
3300033412|Ga0310810_10742146All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium902Open in IMG/M
3300033412|Ga0310810_10884790All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium787Open in IMG/M
3300033475|Ga0310811_11243093All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium605Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.85%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil8.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.95%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere2.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.98%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.98%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.98%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.99%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459003Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2189573000Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)EnvironmentalOpen in IMG/M
3300000754Amended soil microbial communities from Kansas Great Prairies, USA - acetate Total DNA F2.4TBEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300022901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4EnvironmentalOpen in IMG/M
3300024279Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026818Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2-11 (SPAdes)EnvironmentalOpen in IMG/M
3300030945Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_020669002170459003Grass SoilIYEGGSXPRQDRPIFPTRDLERFCGWRSTDVIWHFLETYERTICVDIRSRRTIFRYAGERSFAMPGLTFKPNTSSWWERLLAESRIRKLKAIEI
N55_006165802189573000Grass SoilGGSLHGETADFPSRDLERVVVGLHLRNWNFFETYKRTICVDIRSRRTIFRYAGVVTSKTDNSSWWERLLAELRIRKLKAIEI
JGI11851J11668_100657623300000754SoilRDLERLVAGVHRRTSHFFETYERTICVDIRSRRTIFRYAGRTAKRNNSSWWERLLAELRICKLKAIEI*
JGI25617J43924_1011718223300002914Grasslands SoilLRIDLERVVVGLHLRNWHFFETYKRTIYVDIRSWRTIFQYAGALTSKPNNSSWWERLLAVLRIDKLKAIKI*
JGI25617J43924_1035700023300002914Grasslands SoilVVVGLHVRNWHFFETYKRTICVDIRSQRTIFRCAGTFKPNNSSWWERLLAVLRIRKVKAIVI*
Ga0062591_10202153723300004643SoilFPTRDLERLVAGVHWRSSHFFETYKRTICVDIRSRRTIFRCAGRTAKRNNSTWWERLLADLRICKLKAIEI*
Ga0065712_1028549013300005290Miscanthus RhizosphereNWHFFETYKRTICVDIRSQRTIFGYAGTFNPQQPAVWWTRLLTVLRIRKVRPIAI*
Ga0065715_1002623713300005293Miscanthus RhizosphereFETYKRTICVDIRSQRTIFGYAGTFNPQQPAVWWKRLLTVLRIRKVKPIVI*
Ga0066388_10667333323300005332Tropical Forest SoilDLERVVVGLHVRNWHLFETYKRTICVDIRSQRTIFRCAGSFNPNNSSWWQRLLAVLRICKVKAIVI*
Ga0070668_10057691513300005347Switchgrass RhizosphereKTADFPTRDLERLVAGVHRRTSHFFETYERTICVDIRSRRTIFRYAGRTAKRNNSSWWERLLAELRICKLKAIEI*
Ga0070669_10060615313300005353Switchgrass RhizosphereNWHFFETYKRTICVDIRSQRTIFGYAGTFKPQQPAVWWKRLLTVLRIRKVKPIVI*
Ga0070709_1035548433300005434Corn, Switchgrass And Miscanthus RhizosphereRNWNFFETYKRTICVDIRSRRTIFRYAGAVTSKTDNSSWWERLLAELRIRKLKAIEI*
Ga0070710_1030359813300005437Corn, Switchgrass And Miscanthus RhizosphereVVGLHLPNWHFFETYKRTICVDIRSQRTIFSYAGTFNPQQPAVWWKRLVLRIRKVKPIVI
Ga0066681_1008840013300005451SoilGKTADFPTRDVVRVVVGLHLPNWHLFETYKRTICVDIRSQRTIFGYAGTFKLQQPAVWWKRLLTVLRIRKVKPIVI*
Ga0070662_10039615013300005457Corn RhizosphereSLHGKTADFQTRDIERLVFGVHGGNWHFFETYERTVCVDIHSRRTIFRYAGLTSKPNNSSWWKKLVAAIRIRKLNAIEI*
Ga0070707_10056786633300005468Corn, Switchgrass And Miscanthus RhizosphereFETYKRTICVDILSKRTIFRYAGVVTSETDNSSWWEKLLAVLRIRNLRAIEI*
Ga0070699_10137665613300005518Corn, Switchgrass And Miscanthus RhizosphereTADFPTRDLERVVVGLHRRSCHFFETYKRTICLDIRSRRTIFRYAGTFKPNNSSWWKKLLTVLCIRKLKAIVI*
Ga0066692_1084493723300005555SoilYEGGSLHGKTADFPTRDLERVVVRVYGRNCHFFETYERTICVDIRSRRTIFRYAGRTSKRNNSSWWERLLAELRICKLKAIEI*
Ga0066698_1102792423300005558SoilEGGLLHGKTADFLNRDLERVVVGLHLPNWNFFETYKRTICVDIRSQRTIFRYAGALILKPTTSSWWERLIAVLRIRKLKAIEI*
Ga0066903_10064856543300005764Tropical Forest SoilDFPTRDLERVVVGLHVRNRHFFETYKRTICVDIRSQRTIFRCAGTFKPNNSSWWERLLAVLGIRKAKAIVI*
Ga0070712_10129628023300006175Corn, Switchgrass And Miscanthus RhizosphereRVLTTLEVIYEGGSLHGKTADFPARDVERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFSYASTFNPQQPAVWWRGWCFAFAK*
Ga0099791_1043644713300007255Vadose Zone SoilLTRLKVIYEGGSLRGKTADFPTRDLERVVAGIHGGNWHFFETYERTICVEIPNRRTIFRYTGITSKLTNSSWWKRLLAALRIRKPIAIEIRRVAALQKRYA
Ga0105240_1259812813300009093Corn RhizosphereVFGVNGGNWHFFETYERTVCVDIHSRRTIFRYAGRTSKPNNSSWWKKLVAAIRIRKLNAIEI*
Ga0066709_10157602313300009137Grasslands SoilLEVIYEGGSLDGKTADFPTRDPERVVIGLHLPNWHLFETYKRTICVDIRSQRTIFRCAGTFKPNNVSWWERLLTVLRICKLKPIVI*
Ga0099792_1052544633300009143Vadose Zone SoilVIYEGGSLHGKTADFTTRDLDRLVAGVHRRTSHFFETYERTICVDIRSRRTIFRYAGRTSKRNNSSWWERLLAELRICKLKAIEI*
Ga0111538_1178266223300009156Populus RhizosphereNWHFFETYKRTICVDIRSQRTIFRCAGTFKPNSSWWERVLAVLRMRKVKAIVI*
Ga0105249_1283438523300009553Switchgrass RhizosphereSLHSKTADFPTRDLERLAVGLHRRNWHFFETYERTVCVDIRSGRTIFRYAGITSKANDSAWWKRLLAGLGIRKFRTIEI*
Ga0134088_1055241423300010304Grasslands SoilTSHFFETYERTICVDIRSRRTIFRYAGRTSKRNNSSWWERLLAELRICKLKAIEI*
Ga0134125_1146169923300010371Terrestrial SoilHLRNWNFFETYKRTICVDIRSQRTIFRYAGVVTSKTDNSSWWDRLLAELRIRKLKAIET*
Ga0134128_1253657523300010373Terrestrial SoilFFETYKRTICVDIRSQRTIFGYAGTFKPQQPAVWWKRLLTVLRIRKVKPIVI*
Ga0105239_1024732113300010375Corn RhizosphereWHFFETYERTVCVDIHSRRTIFRYAGLTSKPNNSSWWKKRVAAIRIRKLNAIEI*
Ga0134126_1213437413300010396Terrestrial SoilVVVGLHLSNWNFFETYKRTICVDVRSHRTIFRYAGNLKAQLSAVWWKRLLAVLRIRKLKPIVI*
Ga0134124_1093048633300010397Terrestrial SoilLEVIYDGGSLHSKTADFPTRDLERLAVGLHRRNWHFFETYERTICVDIRSGRTIFRYGGITSKANNSAWWKRLLARFGLRKFRTIEI*
Ga0137364_1080288323300012198Vadose Zone SoilLRNWNFFETYKRTICVDIRSQRTIFRYAGTFKPQQPAVWWKRLLAVLRIRKLKPIVI*
Ga0137364_1104082323300012198Vadose Zone SoilRLVAGVHRRTSHFFETYERTICVDIRSRRTIFRYAGRTSKRNNSSWWERLLAELRICKLKAIEI*
Ga0137382_1051109523300012200Vadose Zone SoilAGVHRRTSHFFETYERTICVDIRSRRTIFRYAGRTSKRHNSSWWERLLAELRIHKLKAIVI*
Ga0137365_1033475533300012201Vadose Zone SoilFPTRDLERVVAGLHLRNWNFFETYKRTICVDIRSQRTIFRYAGTFKPNNSSWWERLFAVLRIRKLKPIVI*
Ga0137365_1092010123300012201Vadose Zone SoilLVAGVHRRTSHFFETYERTICVDIRSRRTIFRYAGRTSKRNNSSWWERLLVELRICKLKAIEI*
Ga0137363_1106233823300012202Vadose Zone SoilADFPTRDLDRFVVGVHRRNWHFFETYERTICVDIHSRRTIFRYAGITSKLTNSSWWKRLLVALGIRKLRAIEI*
Ga0137363_1131771513300012202Vadose Zone SoilEVIYEGGSLHGKTADFPTRDLERVVVGLHLRNLHFFETYKRTICVDIRSQRTIFRCAGTFKPNNSSWWERLLGVLRIRKVKAIAI*
Ga0137363_1145101123300012202Vadose Zone SoilHGKTVDFPTRDLERVVVGLHLRNWHFFETYKRTICVDIHSQRTIFRHAGTFKPNNSSWWERLLAVLRIHKLKAIEI*
Ga0137378_1098786923300012210Vadose Zone SoilRNWHFFETYKHTIYVDIRSWRTIFRYAGALTSKPNNSSWWERLLAVLRIDKLKAIKI*
Ga0137371_1068111323300012356Vadose Zone SoilVAGVHRRTSHFFETYERTICVDIRSRRTIFRYAGRTSKRNNSSWWERLLAELRICKLKAIEI*
Ga0137360_1121456223300012361Vadose Zone SoilGLHLRNWHFFETYKRTIYVDIRRWRTIFQYAGALTSKPNNSSWWERLLAVLRIDKLKAIKI*
Ga0157285_1032508013300012897SoilKVIYEGGCLDGKTADFPTRDLERVVVGLHLRNWHFFETYKRTICVDIRSQRTIFRCAGTFKPNNSSWWERLLAVLRIRKVKAIAI*
Ga0137395_1060036513300012917Vadose Zone SoilTLEVIYEGGSLHGKTADFPTRDVERVVVGLHLANWHFFETYKRTICVDIRSQRTIFRYAGTFKPQQPAVWWKRLLAVLHIRKLKPIVI*
Ga0137416_1065783323300012927Vadose Zone SoilLHGKTADFPTRDLERVVVGLHLRNWHFFETYKRTICVDIRSQRTIFRCAGTFKPNNSSWWERLLAVLRIRKVKAIAI*
Ga0164300_1084294623300012951SoilYERTICVDIRSQRTIFSYAGTFNPQQPATWWKRLVLRIRKVKPIVI*
Ga0134087_1040343323300012977Grasslands SoilTRDPERVVIGLHLPNWHLFETYKRTICVDIRSQRTIFRCAGTFKPNNGSWWERLLTVLRICKLKPIVI*
Ga0164304_1125320323300012986SoilETYKRTICVDIRSQRTIFRCVGTFKPNNSSWWERLLAVLRIRKVKAIAI*
Ga0164306_1036431433300012988SoilGSLHGKTADFPTRDVERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFRCAGTFKPNNSSWWERLLAVLRIRKLKAIQI*
Ga0157378_1028047123300013297Miscanthus RhizospherePTRDLSGFVVGVHPGQNLHFFETYKRTVCIDIGSHRTIFRYAGLAFQRNNSSWWTGLLAVLRIRKLKTIVI*
Ga0157375_1178148723300013308Miscanthus RhizosphereHFFETYERTICVDIRSQRTIFSNTGLASKANSLSSWKRLLAELRIRKLKAIEI*
Ga0134078_1005348833300014157Grasslands SoilHLPNWNFFETYKRTICVDIRSQRTIFRYAGALILKPTTSSWWERLIAVLRTRKLKAIEI*
Ga0163163_1078261433300014325Switchgrass RhizosphereFETYERTICVDIRSQRTIFRNTGLASKANSLSSWKRLLAELRIRKLKAIEI*
Ga0157379_1199864513300014968Switchgrass RhizosphereHFFETYKRTICVDIRSQRTIFGYAGTFNPQQPAVWWTRLLTVLRIRKVRPIAI*
Ga0132258_1186709833300015371Arabidopsis RhizosphereGLHRRNWHFFETYERTICVDIRSGRTIFRYAGIASKVNSSTWWKRLLAALGIRKFRTIEL
Ga0132256_10010667043300015372Arabidopsis RhizosphereNWHFFETYERTICVDIRSGRTIFRYAGIASKVNGSTWWKRLLAALGIRKFRTIEI*
Ga0132256_10034308933300015372Arabidopsis RhizosphereVERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFRNAGLASKANSISSWKRLLAELRIRKLKAIEI*
Ga0132256_10197716013300015372Arabidopsis RhizosphereVERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFGYAGTFKPQQQAVGWKRLLTVLRIRKVKPIVI*
Ga0132257_10146747513300015373Arabidopsis RhizosphereVVVGLHLPDWHFFETYKRTICVDIRSQRTIFGYAGTFKPQQPAVWWKRVLTVLRIRKVKPIVI*
Ga0132255_10013882153300015374Arabidopsis RhizosphereERLAIGLHRRNWHFFETYERTICVDIRSGRTIFRYAGIASKVNSSTWWKRLLAALGIRKFRTIEL*
Ga0132255_10315055413300015374Arabidopsis RhizosphereRRTSHFFETYKRTICVDIRSRRTIFRYAGRTSKRNNSTWWERLLAELRICKLKAIEI*
Ga0187825_1003220713300017930Freshwater SedimentHFFETYKRTICIDIGSQRTIFRCAGLTFQRNSSSCWKELLAVLRIRKLKAIVI
Ga0184604_1012183123300018000Groundwater SedimentTRDLERVVVGLHLPNWNFFETYKRTICVDIRSHRTIFRYAGNLKAQLSAVWWKKLLAVLRIRKLKPIVI
Ga0184608_1040250323300018028Groundwater SedimentFETYKRTICVDIRSHRTIFRYAGNLKAQLSAVWWKKLLAVLRIRKLKPIVI
Ga0066667_1017843733300018433Grasslands SoilADFLNRDLERVVVGLHLPNWNFFETYKRTICVDIRSQRTIFRYAGALTSKTNNSSWWERLIAVLRIRKLKAIEI
Ga0210406_1106702523300021168SoilIRSGRTIFRYAGITSKANNSAWWKRLLAGLGIRKFRTIEI
Ga0247788_111066413300022901SoilLGVIYEGGSLHGKTADFPTRDLERLVVGVHRRTSHFFETYKRTICIDIRSRRTIFRCAGRTAKRNNCSWWERLLAKHRICKLKAIEI
Ga0247692_105486523300024279SoilGGSLHGKTADFPTRDVERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFGYAGTFNPQQPAVWWKRLLTVLRIRKVRPIAI
Ga0247668_101283643300024331SoilGGSLHGETADFPSRDPERVVVGLHLRNWNFFETYKRTICVDIRSRRTIFRYAGAVTSKTDNSSWWERLLAELRIRNLKAIEI
Ga0207663_1132774323300025916Corn, Switchgrass And Miscanthus RhizosphereGGSLHGKTADFPTRDVERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFSYAATFNPQQPAVWWKRLLTVLRIREVKPIVI
Ga0207649_1020403013300025920Corn RhizosphereTYERTICVDLRSQRTIFRNTGLASKANSLSSWKRLLAELRIRKLKAIEI
Ga0207646_1121882823300025922Corn, Switchgrass And Miscanthus RhizosphereLHLRNWNFFETYKRTICVDIRSQRTIFRYAGVVTSKTDNSSWWERLLAELRIRKLKAIEI
Ga0207701_1090862413300025930Corn, Switchgrass And Miscanthus RhizosphereRVVVGLHLPDWHFFETYKRTICVDIRSQRTIFGYAGTFKPQQPAVWWKRLLTVLRIRKVKPIVI
Ga0207701_1119958723300025930Corn, Switchgrass And Miscanthus RhizosphereLRNWHFFETYKRTICVDIRSQRTIFRCVGTFKPNNSSWWERLLAVFRIRKVKAIAI
Ga0207706_1007261013300025933Corn RhizosphereLVFGVHGGNWHFFETYERTICVDIRSRRTIFRYAGRTAKRNNSSWWERLLAELRIC
Ga0207665_1034937413300025939Corn, Switchgrass And Miscanthus RhizosphereVLTTLEVIYEGGCLHGKTADFPTRDLERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFSYAGTFNPQQPAVWWKRLLTVLRIRKVKPIVL
Ga0207677_1011248043300026023Miscanthus RhizosphereSHFFETYKRTICIDIRSRRTIFRCADRTAKRNNCSWWERLLAVFRIRKVKAIAI
Ga0209057_111940823300026342SoilTLEVIYEGGSLHGKTADFPTRDLDSLVAGVHRRTSHFFETYERTICVDIRSRRTIFRYAGRTSKRNNSSWWERLLAELRICKLKAIEI
Ga0209648_1077169723300026551Grasslands SoilVVGLHVRNWHFFETYKRTICVDIRSQRTIFRCAGTFKPNNSSWWERLLAVLRIRKVKAIV
Ga0207634_10377913300026818SoilHFFETYKRTICVDIRSQRTIFGHAGTVKPQQPAVWWKRLLTVLRIRKVKAIEI
Ga0075373_1163389523300030945SoilNWHFFETYERTICVDIRSGRTIFRYAGLTSKPDNSSWWKRLLAALRIRQLNAIEILVLFTVANVCGN
Ga0170834_10659684523300031057Forest SoilVATRDLERLVVGVHGGNWHFFETYERTICVDIRSRRTIFRYAGLTSKPDNSSWWKRLLAALRVRQLNAIEI
Ga0170823_1159170233300031128Forest SoilGKTADFPTRDLERMVVGVHARDRHFFETYERTICVDIHSRRTIFRYAGLTSKPNNSSGWKRLLTELHIRRLKAIKI
Ga0170824_11774740523300031231Forest SoilVGVHRRNWHFFETYERTICVDIRSRRTIFRYAGERSFAMPGLTSKSNNSSWWERLLAESHVGKLKAIEI
Ga0170824_12026251813300031231Forest SoilRFVLGVHQRTSHFFETYERTICVDIRSRRTIFRYAGRTAKRNNSTWWERLLAELRICKLKAIEI
Ga0170820_1623213323300031446Forest SoilGVHGGNWHFFETYERTICVDIRSGRTIFRYAGLTSKPDNSNWWKRLLAALRIRQLNAIEILVLFTIANVCGN
Ga0170820_1709323123300031446Forest SoilEVIYEGGSLHGKTADFPSRDLERVVVGLHLRNWHFFETYKRTICVDIRSQRTIFRCAGTFKPSNSSWWERLLAVLRIRKVKAIVI
Ga0170819_1694207013300031469Forest SoilSLHGKTADFPTRDLERFVVGVHRRNWHFLETYERTICVDIRSRRTIFRYAGERSFAMPGLTSKPNNSSWWERLFAESRIRKLKAIEI
Ga0170818_10463460633300031474Forest SoilRNWHFLETYERTICVDIRSRRTIFRYAGRTAKRNNSTWWERLLAELRICKLKAIEI
Ga0170818_10905429313300031474Forest SoilIERFVVGVHRRNWHFFETYERTICVDIRSRRTIFRYAGERSFAMPGLTSKSNNSSWWERLLAESHVGKLKAIEI
Ga0307479_1055751423300031962Hardwood Forest SoilTYKRTIYIDIRSRRTIFRCASLIVQPNDSTWWKERLAVLRIRKLKAIVI
Ga0307479_1132955313300031962Hardwood Forest SoilNWHFFETYKRTICVDIRSQRTIFSYAGTFNPQQPAVWWKRLLTVLRIRKVKPIVI
Ga0307470_1051949613300032174Hardwood Forest SoilGLHRRNWHFFETYERTICVDIRSGRTIFRYAGITSKANNSAWWKRLLAGLGIRKFRTIEI
Ga0307471_10157200113300032180Hardwood Forest SoilLRIDLERVVVGLHLRNWHFFESYKRTIYVDIRSWRTIFRYAGALTSKPNNSSWWERLLAVLRIDKLKAINP
Ga0307471_10224515313300032180Hardwood Forest SoilGGSLHSKTADFPTRDLERLAVGIHRRNWHFFETYERTICVDIRSGRTIFRYAGITSKANNSAWWKRLLAGLGIRKFRTIEI
Ga0310896_1025488523300032211SoilTLEVIYEGGSLHGKTADFPTRDVERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFGHAGTFKPQQPAVWWKRLLTVLRIRKVKAIEI
Ga0310810_1074214633300033412SoilPNWHFFETYKRTICLDIRSQRTIFGYAGTFKPQQPAVWWKRLLTVLRIRKVKPIEI
Ga0310810_1088479033300033412SoilTADFPTRDVERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFGYAGTFKPQQPAVWWKRLLTVLRIRKVKPIVI
Ga0310811_1124309323300033475SoilTYERTICVDIRSQRTIFRCAGTFKPNNGSWWKRLLAELGIRKLRAIEI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.