Metagenome / Metatranscriptome Family F103614

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103614
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	101 residues
Representative Sequence	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLREGEAWNKDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMFYAAV
Number of Associated Samples	88
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.00 %
% of genes near scaffold ends (potentially truncated)	98.02 %
% of genes from short scaffolds (< 2000 bps)	86.14 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.446 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.792 % of family members)
Environment Ontology (ENVO)	Unclassified (33.663 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.436 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.16% β-sheet: 11.81% Coil/Unstructured: 48.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00578	AhpC-TSA	7.92
PF04011	LemA	3.96
PF13290	CHB_HEX_C_1	2.97
PF10282	Lactonase	1.98
PF07690	MFS_1	0.99
PF00158	Sigma54_activat	0.99
PF00916	Sulfate_transp	0.99
PF00990	GGDEF	0.99
PF02518	HATPase_c	0.99
PF13472	Lipase_GDSL_2	0.99
PF08031	BBE	0.99
PF00753	Lactamase_B	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	3.96
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.99
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	0.99
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	0.99
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
All Organisms	root	All Organisms	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
cellular organisms	root	All Organisms → cellular organisms	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	11.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	11.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	9.90 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	8.91 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.98 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.98 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.90 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	8.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.98 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.98 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.90 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	8.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.98 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.99 %
Opitutae bacterium Tous-C1TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.90 %
Steroidobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	8.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.98 %
Sphingomonas colocasiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas colocasiae	0.99 %
Opitutae bacterium Tous-C1TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10054847	Not Available	794	Open in IMG/M
3300001593\|JGI12635J15846_10046870	All Organisms → cellular organisms → Bacteria	3323	Open in IMG/M
3300002245\|JGIcombinedJ26739_100370527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1312	Open in IMG/M
3300002907\|JGI25613J43889_10197199	Not Available	538	Open in IMG/M
3300004092\|Ga0062389_101258270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	925	Open in IMG/M
3300004092\|Ga0062389_101779996	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300004092\|Ga0062389_104013468	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300004152\|Ga0062386_101007431	Not Available	690	Open in IMG/M
3300005530\|Ga0070679_102189804	Not Available	502	Open in IMG/M
3300005602\|Ga0070762_10486553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300005602\|Ga0070762_11040234	Not Available	562	Open in IMG/M
3300005712\|Ga0070764_10029281	All Organisms → cellular organisms → Bacteria → Proteobacteria	2770	Open in IMG/M
3300006041\|Ga0075023_100459958	Not Available	564	Open in IMG/M
3300006052\|Ga0075029_100825922	Not Available	632	Open in IMG/M
3300006176\|Ga0070765_100245306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1641	Open in IMG/M
3300009500\|Ga0116229_11026287	Not Available	662	Open in IMG/M
3300010371\|Ga0134125_10334147	Not Available	1681	Open in IMG/M
3300012202\|Ga0137363_11209170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	642	Open in IMG/M
3300012582\|Ga0137358_10120929	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300012923\|Ga0137359_10666971	Not Available	908	Open in IMG/M
3300012927\|Ga0137416_11543501	Not Available	604	Open in IMG/M
3300014654\|Ga0181525_10131351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1377	Open in IMG/M
3300014658\|Ga0181519_10116317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1721	Open in IMG/M
3300014838\|Ga0182030_10035860	All Organisms → cellular organisms → Bacteria → Proteobacteria	8505	Open in IMG/M
3300015206\|Ga0167644_1027318	All Organisms → cellular organisms → Bacteria → Proteobacteria	2362	Open in IMG/M
3300015241\|Ga0137418_10012967	All Organisms → cellular organisms → Bacteria	7701	Open in IMG/M
3300019786\|Ga0182025_1349839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1566	Open in IMG/M
3300019789\|Ga0137408_1216308	All Organisms → cellular organisms → Bacteria	2785	Open in IMG/M
3300019889\|Ga0193743_1185482	Not Available	677	Open in IMG/M
3300020021\|Ga0193726_1035483	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300020027\|Ga0193752_1199317	Not Available	761	Open in IMG/M
3300020579\|Ga0210407_10470166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	983	Open in IMG/M
3300020580\|Ga0210403_10001702	All Organisms → cellular organisms → Bacteria → Proteobacteria	20643	Open in IMG/M
3300020582\|Ga0210395_10594190	Not Available	831	Open in IMG/M
3300020582\|Ga0210395_10858853	Not Available	675	Open in IMG/M
3300021170\|Ga0210400_11674311	Not Available	501	Open in IMG/M
3300021401\|Ga0210393_10151125	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300021402\|Ga0210385_11456401	Not Available	523	Open in IMG/M
3300021406\|Ga0210386_11083475	Not Available	681	Open in IMG/M
3300021420\|Ga0210394_10529713	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1036	Open in IMG/M
3300021433\|Ga0210391_10704062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300021475\|Ga0210392_10040440	All Organisms → cellular organisms → Bacteria → Proteobacteria	2811	Open in IMG/M
3300021475\|Ga0210392_10386017	Not Available	1018	Open in IMG/M
3300021475\|Ga0210392_10715957	Not Available	746	Open in IMG/M
3300021475\|Ga0210392_11070071	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021477\|Ga0210398_10808893	Not Available	754	Open in IMG/M
3300021478\|Ga0210402_11356799	Not Available	638	Open in IMG/M
3300021479\|Ga0210410_10222771	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300021479\|Ga0210410_11032138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300022557\|Ga0212123_10293803	Not Available	1140	Open in IMG/M
3300025509\|Ga0208848_1000864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5844	Open in IMG/M
3300026294\|Ga0209839_10104545	Not Available	964	Open in IMG/M
3300026467\|Ga0257154_1079176	Not Available	524	Open in IMG/M
3300026557\|Ga0179587_10763601	Not Available	637	Open in IMG/M
3300027030\|Ga0208240_1032000	Not Available	585	Open in IMG/M
3300027651\|Ga0209217_1211520	Not Available	518	Open in IMG/M
3300027671\|Ga0209588_1272428	Not Available	513	Open in IMG/M
3300027692\|Ga0209530_1089255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	880	Open in IMG/M
3300027698\|Ga0209446_1075178	Not Available	862	Open in IMG/M
3300027817\|Ga0209112_10078322	Not Available	1044	Open in IMG/M
3300027867\|Ga0209167_10329555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	828	Open in IMG/M
3300027879\|Ga0209169_10085309	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300027884\|Ga0209275_10019745	All Organisms → cellular organisms → Bacteria → Proteobacteria	3001	Open in IMG/M
3300027895\|Ga0209624_10339982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1000	Open in IMG/M
3300027895\|Ga0209624_10853878	Not Available	596	Open in IMG/M
3300027911\|Ga0209698_10375640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1114	Open in IMG/M
3300028047\|Ga0209526_10942204	Not Available	521	Open in IMG/M
3300028866\|Ga0302278_10242262	Not Available	868	Open in IMG/M
3300029913\|Ga0311362_10280640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1766	Open in IMG/M
3300029939\|Ga0311328_10856992	Not Available	602	Open in IMG/M
3300029951\|Ga0311371_10115785	All Organisms → cellular organisms → Bacteria	4213	Open in IMG/M
3300029952\|Ga0311346_10276140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas colocasiae	1760	Open in IMG/M
3300029952\|Ga0311346_10497639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1134	Open in IMG/M
3300030503\|Ga0311370_10342964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1908	Open in IMG/M
3300030524\|Ga0311357_11833393	Not Available	504	Open in IMG/M
3300030580\|Ga0311355_11614804	Not Available	556	Open in IMG/M
3300030618\|Ga0311354_10995453	Not Available	773	Open in IMG/M
3300030741\|Ga0265459_13787292	Not Available	531	Open in IMG/M
3300030813\|Ga0265750_1032162	Not Available	727	Open in IMG/M
3300030879\|Ga0265765_1007317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	1187	Open in IMG/M
3300031057\|Ga0170834_105874262	Not Available	791	Open in IMG/M
3300031122\|Ga0170822_11495242	Not Available	598	Open in IMG/M
3300031128\|Ga0170823_15576162	Not Available	583	Open in IMG/M
3300031231\|Ga0170824_103152182	Not Available	589	Open in IMG/M
3300031231\|Ga0170824_107355757	Not Available	782	Open in IMG/M
3300031236\|Ga0302324_102492731	Not Available	632	Open in IMG/M
3300031240\|Ga0265320_10359423	Not Available	643	Open in IMG/M
3300031241\|Ga0265325_10445899	Not Available	564	Open in IMG/M
3300031474\|Ga0170818_104212757	Not Available	795	Open in IMG/M
3300031474\|Ga0170818_112011472	Not Available	1248	Open in IMG/M
3300031616\|Ga0307508_10651244	Not Available	659	Open in IMG/M
3300031708\|Ga0310686_116349701	All Organisms → cellular organisms → Bacteria	4415	Open in IMG/M
3300031712\|Ga0265342_10584035	Not Available	565	Open in IMG/M
3300031715\|Ga0307476_10277470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	1227	Open in IMG/M
3300031715\|Ga0307476_10480635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	920	Open in IMG/M
3300031718\|Ga0307474_10138736	Not Available	1831	Open in IMG/M
3300031823\|Ga0307478_10362838	Not Available	1195	Open in IMG/M
3300031837\|Ga0302315_10256140	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1024	Open in IMG/M
3300031962\|Ga0307479_10708967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	985	Open in IMG/M
3300032174\|Ga0307470_10815479	Not Available	724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.05%
Host-Associated	Host-Associated	4.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.16%
Aquatic	Environmental → Aquatic	10.89%
Plants	Host-Associated → Plants	4.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.28%
Peat	Environmental → Terrestrial → Peat	11.88%
Freshwater	Environmental → Aquatic → Freshwater	6.93%
Sediment	Environmental → Aquatic → Sediment	2.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.97%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.99%
Roots	Host-Associated → Plants → Roots	0.99%
Peat Moss	Host-Associated → Plants → Peat Moss	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.48%
Loam	Environmental → Terrestrial → Soil → Loam	16.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.97%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.97%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.95%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.99%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100548471	3300001545	Forest Soil	MSRDDEDRILHGLYYYRESIDEDVQVSSEQXLWLAMHPLREGDAWHKDGKLQSLNPADFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAIRLHTWRG
JGI12635J15846_100468701	3300001593	Forest Soil	MNRDDEDRILHGLYFYXQGIDEEVSLSGEQVLWLAMHPLRDGETWSKEDMPQSFDTSVVPDEIRPKLLAAKLELPLRYLQYRRLIKYT
JGIcombinedJ26739_1003705272	3300002245	Forest Soil	MSREDEDRILHGLYYYRESIDEEVLVSGEQVLWLAMHPLPEGEAWNKDGQLQSVDASAFPAEVQSKLVTAKLELPLRYLQIRRLIKYTGRSDATLSVAVTFAGADRAIRLHTR
JGI25613J43889_101971991	3300002907	Grasslands Soil	MSRDDEDRILHGLYYYRESIDEEVPVTTGQMLWLAMHPLREGQSWNREGQLQSVDTSAFPDEIQSKLVTAKLELPLRYLQYRRLVK
Ga0062389_1012582702	3300004092	Bog Forest Soil	MSRNDEDRILHGLYYYRESIDEDVPVTGGQILWLAMHPMREGESWNAEGRLQGIDTSVFPAEIQTKLVTAKLELPLRYLEYRRLIRYTK
Ga0062389_1017799962	3300004092	Bog Forest Soil	MSRDDEDRILHGLYYYRESIDEEMLVAGEQVLWLAMHPLREGGDWNKDGELQSVDTSAFPSDVQSKLVTAKLELPLRYLEYRRLIKYTRRSDAMLSVAVTFAGTDRAIRLHTRR
Ga0062389_1040134682	3300004092	Bog Forest Soil	MSRDDEDRILHGLYYYRESIDEDVQVSSEQLLWLAMHPLREGEAWHRDGKLQRVDASEFPVEIRTKLITAKLELPLRYLQYRRLIKYARRS
Ga0062386_1010074311	3300004152	Bog Forest Soil	VSRDDEDRILHGLYYYRENIDEDVQVSSDELLWLAMHPLRDGEAWLKNGRLQSLNAAEFPEDIRAKLLTAKLELPLRYLQYRRLIKYARRNDGMLYAAVTF
Ga0070679_1021898041	3300005530	Corn Rhizosphere	MSRDDEDRILHGLYFHRESIDEEWPVTGAQLLWLAMHPLREGDVWDKDGKPQSVDASQFPAEIRAKLLTAKLELPLRYLQYRRLIKYSRREDGTHSIAVTFAGADRAIRLHTRRGR
Ga0070762_104865531	3300005602	Soil	MSREDEDRILHGLYYYRQAIDEEVPMSGEQVLWLAMHPLRDGEAWSKDGTPQSFDTSIVPDEIQPKLLAAKLELPLRYLQYRRLIKYTKRNDATLSVAVTFAGADRAIRLHTRRGR
Ga0070762_110402341	3300005602	Soil	MSRDDEDRILHGLYYHRESIDEEVLVTGEQVLWLAMHPLPEGEAWNKDGQLQSVDASAFPADIQSKLVTAKLELPLRYLQIRRLIKYTGRSDATLSVSVTFAGADRAIRLHTRRGRMD
Ga0070764_100292815	3300005712	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGEGESWSKDGKLQSLDPSEFPEEIRGKLLTAKLELPLRYLQYRRLITYARRSDGMFYAAVTFAGADRAIRLHTRRGR
Ga0075023_1004599581	3300006041	Watersheds	MSRDDEDRILHGLYYYRENIDEEVSVSGEQILWLAMHPLREGEGWYKEGQPQSLDTSAFPAEIQSKLITAKLELPLRYLQYRRLIKYTRCKDAT
Ga0075029_1008259221	3300006052	Watersheds	MSRDDEDRILHGLYYYRENIDEDVQVSSDELLWLAMHPLRDGEAWSKDGKLQSLNAAEFPEDIRSKLLTAKIELPLRYLQYRRLIKYARRGDGMLYAAVTFAGADRAIRL
Ga0070765_1002453061	3300006176	Soil	MSREDEDRILHGLYYYRQAIDEEVPMSGEQVLWLAMHPLRDGEAWSKDGTPQSFDTSIVPDEIQPKLLAAKLELPLRYLQYRRLI
Ga0116229_110262871	3300009500	Host-Associated	MNRADEDRILHGLFYHREAIDEDLQVTGEQILWLAMHPLQEAEAWEEGGQLQSLDLEQFAPEIRSKLIAAKLELPLRYLQYRRLIKYVKQRDATILVAVTFAGADRAIRLHSRRGRLD
Ga0134125_103341474	3300010371	Terrestrial Soil	MSRDDEDRILHGLYFYRESIDEEWPVTGPQLLWLTMHPLREGDAWDKDGKPQSVDASQFPAEIRAKLLTAKLELPLRYLQYRRLIKYSLGEDGT
Ga0137363_112091701	3300012202	Vadose Zone Soil	MSRHDEDRILHGLYYHRENIDEEVPVSGEQVLWLAMRSLREGESWNREGQLQSVDTSAFPDEIRSKLVTAKLELPLRYLQYRR
Ga0137358_101209291	3300012582	Vadose Zone Soil	MSRDDEDRILHGLYYHRENIDEDVQVSREQLLWLAMHPLREGDAWRKDGKLQSVDAAEFPEEIRGKLITAKLELPLRYLQYRRLITYAKRSDGMLYAAVT
Ga0137359_106669712	3300012923	Vadose Zone Soil	MSRDDEDRILHGLYYHRENIDEDVQVSREQLLWLAMHPLREGDAWRKDGKLQSVDAAEFPEEIRGKLITAKLELPLRYLQYRRLITYAK
Ga0137416_115435012	3300012927	Vadose Zone Soil	MSRDDEDRILHGLYYYRENIDEEVPVTGEQVLWLAMHPLREGGSWHNEGELQNVDTSAFPDEIRSKLATAKLELPLRYLQYRRLIK
Ga0181525_101313511	3300014654	Bog	MSREDEDRILHGLYYYRENVDEEFPVSAEQVLWLALHPLQEGGSWNKDGQLQSVDTSLFPADIESKLITAKLELPLRYLQYRRLIKYTRESDTLVIAVTFAGADRAIRLHTRRGRMDLW
Ga0181519_101163171	3300014658	Bog	MIRDDEDRILHGLYYQHQAIDEDISLSGEQVLWLAMNPLRDGESWSKDGVPQSFDTSIVPDEIKSKLLAAKLELPLRYLQYRRLIRYAKRGDATLSI
Ga0182030_1003586010	3300014838	Bog	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAVHPLREGDAWHKDGKLQSLDASAFPEEIRAKLITAKLELPLRYLQYRRLITYARRSDGMFYAAVTFAGADRAIR
Ga0167644_10273184	3300015206	Glacier Forefield Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLREGEAWNKDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMFYAAV
Ga0137418_100129671	3300015241	Vadose Zone Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLQEGDAWSKGGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLITYAR
Ga0182025_13498393	3300019786	Permafrost	MSRDDEDRILHGLYYYRESIDEEMLVAGEQVLWLAMHPLREGGEWNKEGELQSVDTSAFPSDVQSKLVTAKLELPLRYLEYRRLIKYTRRKDAMLSVAVTFAGTDRAIRLHTRRGAWICGTESTRRASSA
Ga0137408_12163081	3300019789	Vadose Zone Soil	MSRDDEDRILHGLYYYRENIDEDVPVSGEQVLWLAMHPLGEGESWNEEGQLQSVDTSAFPDEIRSKLVTAKLELPLRYLQYRRLIRYTRRN
Ga0193743_11854821	3300019889	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLRDADVWHKDGKLQSLDASEFPEEIRAKLITAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAIRLHTRRGRMD
Ga0193726_10354831	3300020021	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGEGDAWHKDGKLQSVDASTFPGDIRAKLITAKLELPLRYLQYRRLITYAKRSDGMLYAAVTFAGADRAIRLHTRR
Ga0193752_11993172	3300020027	Soil	MSRDDEDRILHGLYYHRENIDEDVQVSSEQLLWLAMHPLQEGDAWSKDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMFYAAVTF
Ga0210407_104701662	3300020579	Soil	MSRDDEDRILHGLYYHHQDIDEEVSLSGEQLLWLTMHPLREGESWSKEGVPQSFDTSAVPVEIQSKLVTAKLELPLRYLQYR
Ga0210403_1000170218	3300020580	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSREQLLWLAMHPLREGEIWHKDGKLQSLDASEFPEDVRAKLITAKLELPLRYLQYRRLITYARRSDGMFYAAVTFAGADRAIRLHTRRGRMDLW
Ga0210395_105941902	3300020582	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLREGDAWHRNGKLQHVDASEFPEEIRSKLITAKLELPLRYLQYRRLIKYARRSDGMLYVAVTFAGADRAI
Ga0210395_108588531	3300020582	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMNPLRDGEAWYKNGKLQRLDASEFPEEIRAKLITAKLELPLRYLQYRRLIKYARRSDGMLYAAVTFAGADRAIRLH
Ga0210400_116743112	3300021170	Soil	MSRADEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGESDAWHKDGKLQSLHASDFPEEIRAKLITAKLELPLRYLQYRRLITYAKRSDGMLYA
Ga0210393_101511253	3300021401	Soil	MSRDDEDRILHGLYYYRENIDEDVQVASEQLLWLAMHPLGEGDAWHKDGKLQSLDASEFPAEIRAKLITAKLELPLRYLQYRRLITYA
Ga0210385_114564011	3300021402	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSDELLWLAMHPLRDGDAWYKNGKLQSLNAGEFPEDIRAKLLTAKLELPLRYLQYRRLIKYARRSDGMLYAAVT
Ga0210389_105366371	3300021404	Soil	MSRDDEDRILHGLYYYRESIDEEVPVTSEQMLWLAMHPLREGESWNKEGQLQSVDASAFPDEVQSKLVTAKLELPL
Ga0210386_110834752	3300021406	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLSEGEAWNKDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMLYAAVTFA
Ga0210394_105297132	3300021420	Soil	MSREDEDRILHGLYYYRQAIDEEVPMSGEQVLWLAMHPLRDGEAWSKDGTPQSFDTSIVPDEIQPKLLAAKLELPLRYLQYRRLIKYTKRNDATLSVAVTF
Ga0210391_107040621	3300021433	Soil	MSRDDEDRILHGLYYYRQAIDEEVPLSGEQVLWLAMHPLRDGEGWSKDGTPQSFDTSIVPDEIQPKLLAAKLELPLRYLQYRRLIKYT
Ga0210392_100404405	3300021475	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLQEGEAWNRDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRL
Ga0210392_103860171	3300021475	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSREQLLWLAMHPLREGEVWHKDGKLQSLDASEFPEDVRAKLITAKLELPLRYLQYRRLITYARRSDGMFY
Ga0210392_107159571	3300021475	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGEGESWSKDGKLQSLDPSEFPEEIRGKLLTAKLELPLRYLQYRRLITYARRSDGMFYAAVTFAGADRAIRLHTRRGRMDL
Ga0210392_110700712	3300021475	Soil	MSRADEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGESDAWHKDGKLQSLHASDFPEEIRAKLITAKLELPLRYLQYRRLITY
Ga0210398_108088931	3300021477	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSDELLWLAMHPLRDGDAWYKNGKLQALNAGEFPEDIRAKLLTAKLELPLRYLQYRRLIKYARRSDGMLYAAVTFAGADRAIRLH
Ga0210402_113567991	3300021478	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLQEGDAWSKDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMFYAAV
Ga0210410_102227713	3300021479	Soil	MSRDDEDRILHGLYYYRENIDEDVQVTSEQLLWLAMHPLREAEAWNKEGKLQSMDASEFPAEIRSKLLTAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAI
Ga0210410_110321382	3300021479	Soil	MSRDDEDRILHGLYYYRQAIDEEVPLSGEQVLWLAMHPLGDGEAWSKDGTPQSFDTSIVPDEIQPKLLAAKLELP
Ga0212123_102938031	3300022557	Iron-Sulfur Acid Spring	MSRDDEDRILHGLYYHRESIDEEVQVTGEQLLWLAMHPLREGESWSNEGQPQSVDTSAFPDEIRSKLLTAKLELPLRYLQYRRLIKYMRRNDATLSIAVTFAGADRAIR
Ga0208848_10008646	3300025509	Arctic Peat Soil	MSRDDEDRILHGLYYDRQDIDEEVSLSGEQVLWLAMHPLGDGEAWGKEGVPQSFDTSVVPDDIRPKLLAAKLELPLRYLQYRRLIKYTKRSDATLSVAVTFAGAD
Ga0209839_101045452	3300026294	Soil	MIRDDEDRILHGLYYYRENIDEDVQVTSEQLLWLAMHPLQEGDAWHKEGKLQSVDASEFPEEIRAKLITAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAG
Ga0257154_10791761	3300026467	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLREGESWNKEGKLQSLDPSEFPEEIRGKLLTAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAIRLHTWRGR
Ga0179587_107636011	3300026557	Vadose Zone Soil	MSRDDEDRILHGLYYYRENIDEDVPVSGEQVLWLAMHPLGEGESWNEEGQLQSVDTSAFPDEIRSKLVTAKLELPLRYLQYRRLIRYTRRNDATLSI
Ga0208240_10320002	3300027030	Forest Soil	MSRDDEDRILHGLYYYRENIDEDVQVTSEQLLWLAMHPLREGEAWNKEGKLQSMDASEFPEEIRSKLITAKLELPLRYLQYRRL
Ga0209217_12115201	3300027651	Forest Soil	MSRDDEDRILHGLYYYRENIDEEVPVTGEQVLWLAMHPLREGESWNGEGRLQSVDTSAFPDDVRSKLVTAKLELPLRYLQYRRLIKYTRSNDATL
Ga0209588_12724281	3300027671	Vadose Zone Soil	MSRDDEDRILHGLYYYRENIDEEVPVSGEQVLWLSMHPLREGESWNKEGQLQSVDTSAFPDEIRSKLVTAKLELPLRYLQYRRLIKYTRRGDATLSVAVTFA
Ga0209530_10892551	3300027692	Forest Soil	MSRDDEDRILHGLYYYRETIDEEIPVSGEQVLWLAMHPLPEGEAWNKDGQLQSVDASAFPTEIQSKLVTAKLELPLRYLQIRRLIKYTGRSDATLSVSVT
Ga0209446_10751782	3300027698	Bog Forest Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSDELLWLAMHPLRDGEAWHKDGRLQSLNAAEFPEDIRAKLLTAKLELPLRYLQYRRLIKYARRSDGMLYA
Ga0209112_100783221	3300027817	Forest Soil	MSRDDEDRILHGLYYYRENIDEDVQVTSEQILWLAMHPLAEGEAWNKDGKLQSLDASEFPEEIRGKLLTAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAIRLHTRRGRMDLW
Ga0209167_103295551	3300027867	Surface Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSNELLWLAMHPLRDGAAWNKDGKLQSLDAAEFPEDIRSKLLTAKLELPLRYLQYRRLIKYAR
Ga0209169_100853093	3300027879	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGEGESWSKDGKLQSLDPSEFPEEIRGKLLTAKLELPLRYLQYRRLITYARRSDGMFYAAVTFAGADRA
Ga0209275_100197451	3300027884	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGEGESWSKDGKLQSLDPSEFPEEIRGKLLTAKLELPLRYLQYRRLITSQ
Ga0209624_103399822	3300027895	Forest Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGEGESWSKDGKLQSLDPSEFPEEIRGKLLTAKLELPLRYLQYRRLITYARRSDGMFYAAVTFA
Ga0209624_108538781	3300027895	Forest Soil	MSRDDEDRILHGLYYYRESIDEEMPVTSEQMLWLAMHPLREGESWNKEGELQSVDASAFPDEVQSKLVTAKLELPLRYLQYRRLVKYTRRNDETFSI
Ga0209698_103756402	3300027911	Watersheds	MSRDDEDRILHGLYYYRENIDEDVQVSSDELLWLAMHPLRDGEAWSKDGKLQSLNAAEFPEDIRSKLLTAKIELPLRYLQYRRLIKYARRGDGMLYAAVTFAGADRAIRLHTRRGRMDLW
Ga0209526_109422041	3300028047	Forest Soil	MSRDDEDRILHGLYYHRENIDEEVPLTGDQVLWLAMHPLREGESWNSEGELQSVDTSAFPDEIRSKLVTAKLELPLRYLQYRRLIKYT
Ga0302278_102422621	3300028866	Bog	MSREDEDRILHGVYYFRENIDEEVSATGEQLLWLAMHPLREAEAWVSDGQLQSIDTSQFPDDVQAKLVTSKLELPVRYLEYRRLIKYKRN
Ga0311362_102806402	3300029913	Bog	MSRDDEDRILHGLYYHRENIDEEVQVTGVQLLWLAMHPLRDGEIWYKDGRLQSVDTSAFPAEIRSKLVTAKLELPLRYLQYRRLIKYTRC
Ga0311328_108569922	3300029939	Bog	MSREDEDRILHGVYYFRENIDEEVSATGEQLLWLAMHPLREAEAWVSDGQLQSIDTSQFPDDVQAKLVTSKLELPVRYLEYRRLIKYKRNSNATFSIGVTFAGADRAIRLHTRRGRA
Ga0311371_101157851	3300029951	Palsa	MSRDDEDRILHGIYYYRESIDEEVPITGVQLLWLAMHPLREGDTWSKDGQPQSVDTAAFPADIQSKLVTAKLELPLRYLQYRR
Ga0311346_102761401	3300029952	Bog	MSREDEDRILHGVYYFRENIDEEVSATGEQLLWLAMHPLREAEAWVSDGQLQSIDTSQFPDDVQAKLVTSKLELPVRYLEYRRLIKYKRNSNATFSNGVTYA
Ga0311346_104976392	3300029952	Bog	MSRDDEDRILHGLYYHRENIDEEVQVTGVQLLWLAMHPLRDGEIWYKDGRLQSVDTSAFPAEIRSKLVTAKLELPLRYLQYRRLIKYTRCNDSTLSVAVTFAGADRAIR
Ga0311370_103429641	3300030503	Palsa	MSRDDEDRILHGLYYYRESIDEEFIVDNEQVIWLAMHPLREGDAWNKDDRPQSVDTSAFPADVQSKLLTAKLELPLRYLQYRRL
Ga0311357_118333931	3300030524	Palsa	MSRDDEDRILHGLYYHRETIDENVQVSNEQLLWLAMHPLREAEAWQRNGKLQNLDVSEFPADVRAKLITAKLDLPLRYLQYRRLITFTRRSDGMLYAAVTFAGAD
Ga0311355_116148041	3300030580	Palsa	LNRADEDRILHGLYYRREAIDEDLQVTGEQILWLAMHPLQEGEAWERDGQLQSLDVGQFPQEIRPKLIAAKLELPLRYLQYRRLIKYVKQADATHIVAVTFTGADRAI
Ga0311354_109954532	3300030618	Palsa	MSRDDEDRILHGLYYHRETIDENVQVSTEQLLWLAMHPLREAEAWQKNGKPQSLDVSEFPADIRAKLITAKLDLPLRYLQYRRLITYTKRSDGMLYAA
Ga0265459_137872922	3300030741	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLREGEAWNKDGKLQSLDPAGFPEEIRGKLLTAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAIRLHT
Ga0265750_10321622	3300030813	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLSEGEAWNKDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAIRLHTRRGRMDLWYRE
Ga0265765_10073172	3300030879	Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLSEGEAWNKDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMLY
Ga0170834_1058742621	3300031057	Forest Soil	VKYGFACAPLSVPPKASDVESGMSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLREGEAWSKEGKLQSMDPSEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMLYAAVT
Ga0170822_114952421	3300031122	Forest Soil	MSRDDEDRILHGLYYYRENIDEEVPVSGEQVLWLSMHPLREGESWNKEGQLQSVDTSAFPDEIRSKLVTAKLELPLRYLQYRRLIKYTR
Ga0170823_155761622	3300031128	Forest Soil	MSRDDEDRILHGLYYYRQSIDEEVPVTSEQMLWLAMHPLREGESWSKEGQLQSVDASAFPDEIQSKLVTAKLELPLRYLQYRRLVKYTRRNDETFSIAVTFAGADRAIRQGR
Ga0170824_1031521821	3300031231	Forest Soil	MSRDDEDRILHGLYYHRENIDEDVQVSSEQLLWLAMHPLQEGDAWSKDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLITY
Ga0170824_1073557572	3300031231	Forest Soil	MSRDDEDRILHGLYYHRENIDEDVQVSSEQLLWLAMHPLQEGDAWSKDGQLQSLNPAEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAIRLHTRRG
Ga0302324_1024927312	3300031236	Palsa	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLGEGESWSKDGKLQSLDPSEFPEEIRGKLLTAKLELPLRYLQYRRLITY
Ga0265320_103594232	3300031240	Rhizosphere	MSRDDEDRILHGLYYHRESIDEDMSVTAEQILWLAMHPLREGEMWTKDGKLQSVDMSAFPAEIQSKLDTAKLELPLRYLQYRRLIKYTKRSDATLLVAVTFAGA
Ga0265325_104458991	3300031241	Rhizosphere	MSRDDEDRILHGLYYHRQSIDEEVPVTGAQLLWLAMHPLTEGEAWSADGKPQSVDSSAFPSEIQLTLLTAKLELPLRYLQYRRLIRFTE
Ga0170818_1042127571	3300031474	Forest Soil	MSRDDEDRILHGLYYHRENIDEDVQVSSEQLLWLAMHPLQEGDAWSKDGQLQSLNPAEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAIRLHTRRGSMDL
Ga0170818_1120114722	3300031474	Forest Soil	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLQEGDAWSKDGKLQSLDPSEFPEEIRGKLITAKLELPLRYLQYRRLI
Ga0307508_106512442	3300031616	Ectomycorrhiza	MSRDDEDRILHGLYYYRENIDEDVQVSSEQLLWLAMHPLQEGDAWSKDGKLQSLNPSEFPEEIRGKLITAKLELPLRYLQYRRLITYARRSDGMLYAAVTFAGADRAIRLHTRRGRMDLW
Ga0310686_1163497011	3300031708	Soil	MSREDEDRILHGLYYHRESIDEEVLVSGEQVLWLAMHPLPEGEAWNKDGQLQSVDASAFPAEVQSKLVTAKLELPLRYLQIRRLIKYTGRSDATLSV
Ga0265342_105840351	3300031712	Rhizosphere	MSRDDEDRILHGLYYHRENIDEDVSVTSEQILWLAMHPLRDGEAWFKDGQPQSVDTSAFPDDIQSKLSTAKLELPLRYLQYRRLIRYARRGDDAISVAVTFAGADRA
Ga0307476_102774702	3300031715	Hardwood Forest Soil	MSREDEDRILHGLYYYRQAIDEEVPLSGEQVLWLAMHPLRDGEAWSKDGTPQSFDTSIVPDEIQPKLLAAKLELPLRYLQ
Ga0307476_104806351	3300031715	Hardwood Forest Soil	LNRADEDRILHGLYYHREAIDEDLQVSGEQILWLAMHPLQEGETWERDGQLQSLDVEQFPQEIRPKLIAAKLELPLRYLQYRRLIKYVKQRDATNIVAVTFAGADRAFRLHSRRGR
Ga0307474_101387361	3300031718	Hardwood Forest Soil	MSRDDEDRILHGLYYYRENIDEDVQVSREQLLWLAMHPLREGEVWHKDGKLQSLDASEFPEDVRAKLITAKLELPLRYLQYRRLITYARRSDGMFYAAVTFAGADRAIRLHTRRGRMD
Ga0307478_103628381	3300031823	Hardwood Forest Soil	MSRDDEDRILHGLYYYRENIDEDVQVSREQLLWLAMHPLREGEAWHKDGKLQSLDASEFPEEIRAKLITAKLELPLRYLQYRRLITYARRSDGMFY
Ga0302315_102561402	3300031837	Palsa	MSREDEDRILHGLYYYRESIDEEVLVSGDQVLWLAMHPLPEAEAWNKDGQLQSVDASAFPAEVQSKLVTAKLELPLRYLQIRRLIKYTGRSDATLSVSVTFAGADRA
Ga0307479_107089671	3300031962	Hardwood Forest Soil	MSRHDEDRILHGLYYYRENIDEEVGVTGEQVLWLAMHPLREGESWNKEGQAQSVDTSAFPDEIRSKLVTAKLELPLRYLQYRRLIRYTRRNDATLSIAVTFA
Ga0307470_108154791	3300032174	Hardwood Forest Soil	LKMSRDDEDRILHGLYYFRESIDEEVPVTSEQMLWLAMHPLREGESWNTEGGLQSVDTSAFPDEIQSKLMTAKLELPLRYLQYRRLVKYTRGGDETISIAVTFAGADRAIRLHT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103614

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences