Metagenome / Metatranscriptome Family F103393

Basic Information
Family ID	F103393
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	46 residues
Representative Sequence	MKKIRSKHNNLLNYFLYDDKYLSKAYVKKCKKFFKEIERKNENK
Number of Associated Samples	80
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	0.99 %
% of genes from short scaffolds (< 2000 bps)	6.93 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Unclassified (97.030 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (34.654 % of family members)
Environment Ontology (ENVO)	Unclassified (70.297 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.079 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 0.00% Coil/Unstructured: 62.50%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF11171	DUF2958	1.98
PF03237	Terminase_6N	0.99

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.03 %
All Organisms	root	All Organisms	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.03 %
Viruses	superkingdom	All Organisms → Viruses	1.98 %
cellular organisms	root	All Organisms → cellular organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.99 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005514\|Ga0066866_10150383	Not Available	833	Open in IMG/M
3300006332\|Ga0068500_1195041	All Organisms → Viruses → Predicted Viral	3129	Open in IMG/M
3300006735\|Ga0098038_1035751	Not Available	1838	Open in IMG/M
3300008219\|Ga0114905_1034611	Not Available	1920	Open in IMG/M
3300012953\|Ga0163179_10748338	All Organisms → Viruses	833	Open in IMG/M
3300017951\|Ga0181577_10084555	Not Available	2212	Open in IMG/M
3300025086\|Ga0208157_1026405	Not Available	1713	Open in IMG/M
3300025127\|Ga0209348_1087026	Not Available	988	Open in IMG/M
3300025280\|Ga0208449_1041551	Not Available	1281	Open in IMG/M
3300029448\|Ga0183755_1005015	All Organisms → cellular organisms → Bacteria	6224	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.04%
Terrestrial	Environmental → Terrestrial	3.96%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.04%
Soil	Environmental → Terrestrial → Soil	3.96%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	48.51%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.85%
Pelagic	Environmental → Aquatic → Marine → Pelagic	5.94%
Coastal	Environmental → Aquatic → Marine → Coastal	4.95%
Clay	Environmental → Terrestrial → Soil → Clay	3.96%
Strait	Environmental → Aquatic → Marine → Strait	1.98%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.99%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	44.55%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	11.88%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.95%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.96%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.97%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.98%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.99%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.99%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	34.65%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	11.88%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	9.90%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	8.91%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	7.92%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	5.94%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.95%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.96%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.97%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.98%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.98%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.99%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.99%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.99%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.99%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental	Open in IMG/M
3300006093	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189	Environmental	Open in IMG/M
3300006332	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200m	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018940	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_022 - TARA_A100000536 (ERX1782257-ERR1712105)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300021068	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_101500392	3300000115	Marine	MRKIRSKHNNLLNYFLYDDKYLSKEYIKKCKKFFKEIERNYEYKRSMGPGWRIK*
JGI24006J15134_101040192	3300001450	Marine	MRKIRSKHNNLLNYFLYDDKYLSKEYIKKCKKFFKEIERKNENK*
JGI24006J15134_102091571	3300001450	Marine	MGLYNIHMKVRSKHNNLLNYFIYAERDLSRAYVKKCKKFFKELKIKNANKRS*
JGI24006J15134_102390402	3300001450	Marine	MGIYNIHMKVRSKHNNLLNYFIYAERDLSRAYIKKCKKFFKELKIKNANKRS*
KVRMV2_1003181371	3300002231	Marine Sediment	MRKIRSKHSNLLNYFLYDDKYLSPAYIKKCKKFFKEIERKN
JGI25127J35165_10637492	3300002482	Marine	MRKIRSRHNNLLNYFLYKESELSPAYVRKCKKFLKEISCKQKKL*
JGI25127J35165_11181481	3300002482	Marine	MSKIKSKHNNLLNYFLYDHKYLSKEYLRKSKKFLKELTTERINEKRNSNKL*
JGI25132J35274_10291581	3300002483	Marine	MGRVRSKHNNLLNYFLYDDSELSPAYVAKCKKFFKEIEKKNENKRSRKNNTHA*
Ga0066866_101503831	3300005514	Marine	MTIRSKHNNLLNYFLYDNKDLSKEYVKKCKKFFKEIKIKNVTRKEQKN
Ga0082015_10159341	3300006090	Marine	MTIRSKHNNLLNYFLYDNKDLSKEYIKKCKKFFKEIEIKNKKRS
Ga0082019_10638093	3300006093	Marine	MTVRSKHNNLLNYFLYDKKDLSIAYIKSCDKFFKEIKNKNG
Ga0068500_11950416	3300006332	Marine	MTVRSKHNNLLNYFLYDDKDLSKAYVRKCKKFLKELKKQMEKKQ*
Ga0068500_13448172	3300006332	Marine	MRKIRKVIRSNHNDLFNYFIYDEKCLSKKYVSKCVLFLDNLNK
Ga0098038_10357514	3300006735	Marine	MRKIRSKHNNLLNYFLYDDKYLSPAYIKKCKKFFKEIERKNENRRSS*
Ga0098037_10591164	3300006737	Marine	MRKIRSKHSNLLNYFLYDDKYLSPAYIKKCKKFFKEIERKNENRRSS*
Ga0098035_10357101	3300006738	Marine	MTIRSKHNNLLNYFLYDNKDLSKEYIKKCKKFFKEIEIKNKKKEGG*
Ga0098044_11256102	3300006754	Marine	MTIRSKHNNLLNYFLYDNKDLSKEYVKKCKKFFKEIEIKNKKRSETSCHM*
Ga0098044_14043402	3300006754	Marine	MRNKKVRSKHNNLLNYFLYDDSELSVAYVKSCKKFFKEIERKNANKRS*
Ga0098054_10654354	3300006789	Marine	MTVRSKHNNLLNYFLYDKKDLSTAYIKSCDKFFKEIE
Ga0098074_10447303	3300006790	Marine	MGLYKSMKKVRSKHNNLLNYFLYDDKYLSPAYVKKCKKFLERISNESKRSSSHH
Ga0070749_107040271	3300006802	Aqueous	MRKIRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVA*
Ga0070746_102140894	3300006919	Aqueous	MRKIRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNK
Ga0098036_11562492	3300006929	Marine	MTVRSKHNNLLNYFLHDDKDLSKAYVKKCKKFLKELKKQMENK*
Ga0070751_10879485	3300007640	Aqueous	MRKIRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVAA
Ga0110931_10950951	3300007963	Marine	EFMRNKKVRSKHNNLLNYFLYDDSELSPVYVKKCKKFFKEIEIKNENNRSKTNNGQPIKAV*
Ga0110931_12194712	3300007963	Marine	EIMGRVRSKHNNLLNYFLYNDSELSPAYVAKCKKFFKEIEKKNENKRSRKNNTYFK*
Ga0098052_13573301	3300008050	Marine	MRNKKVRSKHNNLLNYFLYDDSELSVAYVKSCKKFFKEIERKNANKRSK*
Ga0114898_10742523	3300008216	Deep Ocean	MRKIKSKHNNLLNYFLYDDKYLSKAYVKKCKKFFKEIERKNENRRSI*
Ga0114898_10974021	3300008216	Deep Ocean	SKHNNLLNYFLYDDKYLSKAYIKKCKKFFKEIERKNENK*
Ga0114905_10346114	3300008219	Deep Ocean	MKKIRSKHNNLLNYFLYDDKYLSKAYVKKCKKFFKEIERKNENK*
Ga0114905_12012641	3300008219	Deep Ocean	HNNLLNYFLYDDKYLSKAYVKKCKKFFKEIERKNENRRSI*
Ga0115566_102723503	3300009071	Pelagic Marine	MRKIKSKHNNLLNYFLYDDKYLSKAYIKKCKKFFKKIESKNENK*
Ga0115549_10460763	3300009074	Pelagic Marine	MRKIKSKHNNLLNYFLYDDKYLSKAYIKKCKKFFKEIESKNENK*
Ga0114996_102677743	3300009173	Marine	MRRVRSKKNNLLNYFLYDDKQLSPAYVKSCKKFFKEIEI
Ga0114903_10415561	3300009412	Deep Ocean	MRRLRSKHNNLLNYFLYNDSELSPAYVAKCKKFFKEIEGKNENNRSKTNNGQPI
Ga0114902_10635991	3300009413	Deep Ocean	MKKIRSKHNNLLNYFLYDDKYLSKAYVKKCKKFFKEIERKNENNRSKTNNGQPIKAV*
Ga0115545_12809322	3300009433	Pelagic Marine	MRKIRSKHNNLLNYFLYDDKYLSKEYIKKCKKFFKEIE
Ga0115571_11385543	3300009495	Pelagic Marine	MRKIKSKHNNLLNYFLYDDKYLSKEYIKKCKKFFKEIERKNENK*
Ga0115567_109646491	3300009508	Pelagic Marine	MRKIKSKHNNLLNYFLYDDKYLSKAYIKKCKKFFKEIERKNENK*
Ga0114901_10726662	3300009604	Deep Ocean	MRKIKSKHNNLLNYFLYDDKYLSKAYVKKCKKFFKEIERKNENK*
Ga0098061_12655342	3300010151	Marine	MRNKKVRSKHNNLLNYFLYDDSQLSPVYVKKCKKFFKEIERKNANKRSG*
Ga0098047_104184603	3300010155	Marine	MTVRSKHNNLLNYFLYDKKDLSTAYIKSCDKFFKEI
Ga0160423_105262322	3300012920	Surface Seawater	MGRVKSKHNNLLNYFLYNDSELSPAYVAKCKKFFKEIEKKNENKRSRKNNTYFK*
Ga0163179_107483382	3300012953	Seawater	MRKIRSKHNNLLNYFLYDDKYLSKAYVKKCKKFFKEIERKNENKNSI*
Ga0181405_11271031	3300017750	Seawater	KHNNLLNYFLYDDKYLSPAYIKKCKKFFKEIERKNENKXSMDAGRWPK
Ga0181411_10882842	3300017755	Seawater	MRKIRSKHNNLLNYFLYDDKYLSPAYIKKCKKFFKEIERKNENK
Ga0181607_101741941	3300017950	Salt Marsh	VRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVVXSYKVN
Ga0181607_103557293	3300017950	Salt Marsh	MKKVRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVAXV
Ga0181607_106989761	3300017950	Salt Marsh	VRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVA
Ga0181577_100845554	3300017951	Salt Marsh	MASIRSKHNNLLNYFLYDEKLLSKAYVRKCKKFLNEIKQKGNNAKIYN
Ga0181600_101369781	3300018036	Salt Marsh	MRKVRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVVXSYKVN
Ga0181601_102991161	3300018041	Salt Marsh	RSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVAXV
Ga0181559_101709482	3300018415	Salt Marsh	MGRVRSKHNNLLNYFLYNDSELSPAYVAKCKKFFKEIEKKNENKRSKKNNT
Ga0192818_101326672	3300018940	Marine	MGIYNIHMKVRSKHNNLLNYFIYAERDLSRAYVKKCKKFFKELKIKNANKRS
Ga0181599_11666951	3300020178	Salt Marsh	GGCMRKVRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVV
Ga0181599_12280683	3300020178	Salt Marsh	MRKVRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQS
Ga0181605_100266597	3300020188	Salt Marsh	MRKVRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVAXI
Ga0181604_101112751	3300020191	Salt Marsh	MRKVRSKHNNLLNYFLYDEKHLSKKYVSKCKKFFKELNKKQSEVVXSYKVN
Ga0211558_104309052	3300020439	Marine	MTIRSKHNNLLNYFLYDEKDLSKSYVRKCKKFLKELKKQMEKK
Ga0211579_107951671	3300020472	Marine	MLDAIVMGIYNIHMKVRSKHNNLLNYFIYAERDLSRAYVKKCKKFFKELKIKNANKRS
Ga0211541_100350021	3300020475	Marine	MTVRSKHNNLLNYFLYDKKDLSKAYIKSCDKFFKEIKNKNG
Ga0206684_10452342	3300021068	Seawater	MTVRSKHNNLLNYFIYDNKDLSKEYIKKCKKFFKEIEIKNKKREEENDNT
Ga0222716_101755795	3300021959	Estuarine Water	MRKIRSKHNNLLNYFLYDEKYLSKKYVNNCKKFFKDLKDKQETNKQSEVVQCK
Ga0222716_104746454	3300021959	Estuarine Water	MRKIRSKHNNLLNYFLYDEKYLSKKYVNNCKKFFK
Ga0222715_103004363	3300021960	Estuarine Water	MRKVRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQLEVEXSYKVN
Ga0222715_105246702	3300021960	Estuarine Water	MRKIRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQLEVAXV
Ga0222714_101014296	3300021961	Estuarine Water	MRKVRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQLEVEXSYKV
Ga0222714_101975875	3300021961	Estuarine Water	INMRKIRSKHNNLLNYFLYDEKYLSKKYVNNCKKFFKDLKDKQETNKQSEVVQCK
Ga0222714_102123865	3300021961	Estuarine Water	MRKIRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKDLKDKQET
Ga0222714_104486294	3300021961	Estuarine Water	VRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQLEVA
Ga0222714_104833851	3300021961	Estuarine Water	MRKIRSKHNNLLNYFLYDEKYLSKKYVNNCKKFFKDLKDK
Ga0222713_105308442	3300021962	Estuarine Water	MKKIRSKHNDLLNYFLHDEKYLSKKYVENCKKFFKDLKDEEKTTKQSEVVQCK
Ga0255753_12606521	3300022926	Salt Marsh	MRKVRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNK
Ga0207901_10049111	3300025045	Marine	MRRVRSKKNNLLNYFLYDDKQLSPAYVKSCKKFFKEIERKNANKRSK
Ga0208157_10264054	3300025086	Marine	MRRLRSKHNNLLNYFLYNNSELSPAYVAKCKKFFKEIERKNENNRS
Ga0208157_10653913	3300025086	Marine	MRKIRSKHNNLLNYFLYDDKYLSPAYIKKCKKFFKEIERKN
Ga0208010_10671564	3300025097	Marine	MTVRSKHNNLLNYFLYDNKDLSKAYIKSCDKFFKEIETNNKE
Ga0208010_11206822	3300025097	Marine	MTIRSKHNNLLNYFLYDNKDLSKEYIKKCKKFFKEIEIKNKKKEGG
Ga0209349_10914082	3300025112	Marine	MRNKKVRSKHNNLLNYFLYDDSELSLAYVKSCKKFFKEIERKNANKRS
Ga0208790_10954102	3300025118	Marine	MTIRSKHNNLLNYFLYDNKDLSKEYVKKCKKFFKEIKIKNVTRK
Ga0209348_10870264	3300025127	Marine	MTIRSKHNNLLNYFLYDEKDLSKAYVRKCKKFLKELKKQKENK
Ga0208919_11099293	3300025128	Marine	MRRLRSKHNNLLNYFLYNDSELSPAYVAKCKKFFKEIEIKNENNRSKTNNGQPIKAV
Ga0209634_11095832	3300025138	Marine	MRKIRSKHNNLLNYFLYDDKYLSKEYIKKCKKFFKEIERKNENK
Ga0209645_12347132	3300025151	Marine	MSKIKSKHNNLLNYFLYDHKYLSKEYLRKSKKFLKELTTERINEKRNSNKL
Ga0209645_12379992	3300025151	Marine	MSKIKSKHNNLLNYFLYDHKYLSKEYLKKCKKFFKELKIKKDTKKHG
Ga0208449_10415512	3300025280	Deep Ocean	MKKIRSKHNNLLNYFLYDDKYLSKAYVKKCKKFFKEIERKNENK
Ga0208030_10743523	3300025282	Deep Ocean	MKKIRSKHNNLLNYFLYDDKYLSKAYVEKCKKFFKEIERKNENK
Ga0209194_11473242	3300025632	Pelagic Marine	YKIMRKIRSKHNNLLNYFLYDDKYLSKEYIKKCKKFFKEIESKNENK
Ga0208428_10324664	3300025653	Aqueous	MSKVRSKHNDLLNYFLYDEKYLSKKYVSKCKKLFKELDKKQHN
Ga0208644_11324484	3300025889	Aqueous	MRKIRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVAXA
Ga0209536_1000996418	3300027917	Marine Sediment	MRKVRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVAXV
Ga0183748_11279222	3300029319	Marine	MTIRSKHNNLLNYFLYNDKDLSKVYVRKCKKFLKELKKQMEKK
Ga0183755_10050155	3300029448	Marine	MRRLRSKHNNLLNYFLYNDSELSPAYVAKCKKFFKEIERKNENNRSKTNNGQPIKAV
Ga0183755_10478914	3300029448	Marine	SKHNNLLNYFLYDDKYLSKAYVKKCKKFFKEIERKNENK
Ga0183757_10572942	3300029787	Marine	MTVRSKHNDLLNYFLYDDKDLSKAYVKKCKKFLKELKKQMENK
Ga0307380_105012814	3300031539	Soil	MRKVRSKHTNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVAXI
Ga0307376_109162241	3300031578	Soil	MKKVRSKHNNLLNYFLHDEKYLSKKYVSKCKKFFKELNKKQSEVAXV
Ga0307375_104301653	3300031669	Soil	MKKVRSKHNNLLNYFLHDEKYLSKKYVSKCKKFFEELNKKQSEVA
Ga0307377_111487973	3300031673	Soil	MRKIRSKHNNLLNYFLYDEKYLSKKYVSKCKKFFKELNKKQSEVA
Ga0315328_100879045	3300031757	Seawater	MTVRSKHNNLLNYFIYDNKDLSKEYKRKCEIFFKEIEIKNKKREEENDNT
Ga0315318_100890327	3300031886	Seawater	MTVRSKHNNLLNYFIYDNKDLSKEYKRKCEIFFKEIE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103393

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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