Metagenome / Metatranscriptome Family F103364

Basic Information
Family ID	F103364
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	78 residues
Representative Sequence	EIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQVYAWPEAV
Number of Associated Samples	86
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.13 %
% of genes near scaffold ends (potentially truncated)	90.10 %
% of genes from short scaffolds (< 2000 bps)	87.13 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (85.149 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.475 % of family members)
Environment Ontology (ENVO)	Unclassified (45.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.525 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.14% β-sheet: 0.00% Coil/Unstructured: 30.86%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF12642	TpcC	11.88
PF12648	TcpE	1.98
PF00027	cNMP_binding	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
All Organisms	root	All Organisms	14.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
cellular organisms	root	All Organisms → cellular organisms	14.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.94 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.94 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.94 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.94 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.99 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.15 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.94 %
Streptomyces rubidus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces rubidus	0.99 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10292819	Not Available	662	Open in IMG/M
3300004080\|Ga0062385_11101108	Not Available	538	Open in IMG/M
3300004082\|Ga0062384_100641914	Not Available	724	Open in IMG/M
3300004635\|Ga0062388_101210146	Not Available	748	Open in IMG/M
3300004635\|Ga0062388_101639991	Not Available	655	Open in IMG/M
3300005439\|Ga0070711_100685639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces rubidus	862	Open in IMG/M
3300005542\|Ga0070732_10263784	Not Available	1032	Open in IMG/M
3300005602\|Ga0070762_10033728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2753	Open in IMG/M
3300006102\|Ga0075015_100586230	Not Available	651	Open in IMG/M
3300006354\|Ga0075021_11127993	Not Available	514	Open in IMG/M
3300009683\|Ga0116224_10549361	Not Available	551	Open in IMG/M
3300010366\|Ga0126379_10582295	Not Available	1202	Open in IMG/M
3300010866\|Ga0126344_1010157	Not Available	634	Open in IMG/M
3300016294\|Ga0182041_11289293	Not Available	668	Open in IMG/M
3300016357\|Ga0182032_11010152	Not Available	711	Open in IMG/M
3300017924\|Ga0187820_1033488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1340	Open in IMG/M
3300017926\|Ga0187807_1187875	Not Available	667	Open in IMG/M
3300017928\|Ga0187806_1069954	Not Available	1090	Open in IMG/M
3300017970\|Ga0187783_10908308	Not Available	635	Open in IMG/M
3300018012\|Ga0187810_10058828	Not Available	1460	Open in IMG/M
3300020583\|Ga0210401_10966400	Not Available	710	Open in IMG/M
3300020583\|Ga0210401_11122915	Not Available	644	Open in IMG/M
3300021178\|Ga0210408_10672655	Not Available	817	Open in IMG/M
3300021181\|Ga0210388_11183897	Not Available	649	Open in IMG/M
3300021181\|Ga0210388_11229076	Not Available	635	Open in IMG/M
3300021406\|Ga0210386_10218082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1620	Open in IMG/M
3300021406\|Ga0210386_10878965	Not Available	768	Open in IMG/M
3300021479\|Ga0210410_11061881	Not Available	699	Open in IMG/M
3300022522\|Ga0242659_1072030	Not Available	645	Open in IMG/M
3300022709\|Ga0222756_1079730	Not Available	534	Open in IMG/M
3300022716\|Ga0242673_1018391	Not Available	969	Open in IMG/M
3300022718\|Ga0242675_1130330	Not Available	511	Open in IMG/M
3300022724\|Ga0242665_10165055	Not Available	709	Open in IMG/M
3300022873\|Ga0224550_1046162	Not Available	624	Open in IMG/M
3300025916\|Ga0207663_11669352	Not Available	513	Open in IMG/M
3300027158\|Ga0208725_1054988	Not Available	595	Open in IMG/M
3300027692\|Ga0209530_1150919	Not Available	650	Open in IMG/M
3300027768\|Ga0209772_10056973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1169	Open in IMG/M
3300027884\|Ga0209275_10201079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1077	Open in IMG/M
3300028047\|Ga0209526_10276548	Not Available	1142	Open in IMG/M
3300028906\|Ga0308309_10469732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1085	Open in IMG/M
3300030503\|Ga0311370_12263360	Not Available	532	Open in IMG/M
3300030524\|Ga0311357_10107840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2783	Open in IMG/M
3300030524\|Ga0311357_11519898	Not Available	566	Open in IMG/M
3300031057\|Ga0170834_106933960	Not Available	630	Open in IMG/M
3300031231\|Ga0170824_117300883	Not Available	590	Open in IMG/M
3300031543\|Ga0318516_10715792	Not Available	568	Open in IMG/M
3300031544\|Ga0318534_10307535	Not Available	913	Open in IMG/M
3300031544\|Ga0318534_10578347	Not Available	639	Open in IMG/M
3300031564\|Ga0318573_10675412	Not Available	555	Open in IMG/M
3300031640\|Ga0318555_10225213	Not Available	1012	Open in IMG/M
3300031715\|Ga0307476_11037489	Not Available	603	Open in IMG/M
3300031719\|Ga0306917_11298288	Not Available	563	Open in IMG/M
3300031748\|Ga0318492_10754127	Not Available	523	Open in IMG/M
3300031751\|Ga0318494_10007640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4969	Open in IMG/M
3300031765\|Ga0318554_10501029	Not Available	687	Open in IMG/M
3300031768\|Ga0318509_10798826	Not Available	522	Open in IMG/M
3300031771\|Ga0318546_10314870	Not Available	1085	Open in IMG/M
3300031771\|Ga0318546_10367891	Not Available	1002	Open in IMG/M
3300031778\|Ga0318498_10560011	Not Available	501	Open in IMG/M
3300031781\|Ga0318547_10659416	Not Available	650	Open in IMG/M
3300031781\|Ga0318547_10802373	Not Available	586	Open in IMG/M
3300031782\|Ga0318552_10701466	Not Available	516	Open in IMG/M
3300031792\|Ga0318529_10444685	Not Available	603	Open in IMG/M
3300031794\|Ga0318503_10224867	Not Available	609	Open in IMG/M
3300031798\|Ga0318523_10017314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3073	Open in IMG/M
3300031805\|Ga0318497_10231844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1023	Open in IMG/M
3300031805\|Ga0318497_10880781	Not Available	502	Open in IMG/M
3300031821\|Ga0318567_10242738	Not Available	1011	Open in IMG/M
3300031821\|Ga0318567_10839563	Not Available	520	Open in IMG/M
3300031823\|Ga0307478_10391093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1150	Open in IMG/M
3300031823\|Ga0307478_10819207	Not Available	779	Open in IMG/M
3300031833\|Ga0310917_10915959	Not Available	590	Open in IMG/M
3300031893\|Ga0318536_10136846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1242	Open in IMG/M
3300031896\|Ga0318551_10596498	Not Available	637	Open in IMG/M
3300031897\|Ga0318520_11017572	Not Available	524	Open in IMG/M
3300031910\|Ga0306923_11513760	Not Available	701	Open in IMG/M
3300031954\|Ga0306926_11805791	Not Available	694	Open in IMG/M
3300031962\|Ga0307479_11490345	Not Available	634	Open in IMG/M
3300032001\|Ga0306922_10877135	Not Available	933	Open in IMG/M
3300032001\|Ga0306922_11638883	Not Available	639	Open in IMG/M
3300032008\|Ga0318562_10446465	Not Available	751	Open in IMG/M
3300032009\|Ga0318563_10207465	Not Available	1057	Open in IMG/M
3300032009\|Ga0318563_10628437	Not Available	578	Open in IMG/M
3300032010\|Ga0318569_10337443	Not Available	702	Open in IMG/M
3300032043\|Ga0318556_10424936	Not Available	695	Open in IMG/M
3300032063\|Ga0318504_10657923	Not Available	504	Open in IMG/M
3300032065\|Ga0318513_10131194	Not Available	1188	Open in IMG/M
3300032066\|Ga0318514_10556493	Not Available	611	Open in IMG/M
3300032067\|Ga0318524_10558804	Not Available	602	Open in IMG/M
3300032068\|Ga0318553_10011131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3953	Open in IMG/M
3300032515\|Ga0348332_13294304	Not Available	705	Open in IMG/M
3300032955\|Ga0335076_10173844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2063	Open in IMG/M
3300033290\|Ga0318519_10196806	Not Available	1148	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.13%
Aquatic	Environmental → Aquatic	12.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.18%
Freshwater	Environmental → Aquatic → Freshwater	10.89%
Peat	Environmental → Terrestrial → Peat	3.96%
Sediment	Environmental → Aquatic → Sediment	1.98%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.89%
Loam	Environmental → Terrestrial → Soil → Loam	8.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.99%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.99%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_102928191	3300003505	Forest Soil	DLLAEVAGLLIGYYRRTAEELKARAAAYYCITAGAGLELIPRWIEVGCSRAAAARLIPPAVPETRQVYDWPEAV*
Ga0062385_111011081	3300004080	Bog Forest Soil	ALRELREIADGRADLLAEVAGLLIGYYRRTAEELKARVAAYYCMAAGADLELIPRWIEVGCSRAAAARLIPPARLVEQQVYAWPEAV*
Ga0062384_1006419141	3300004082	Bog Forest Soil	EVAGLLIGYYRRTAEELKARAAAYYCMTAGADLELIPRWIDVGCARAAAARLIPPAGSAQRRVYAWPEAV*
Ga0062388_1012101461	3300004635	Bog Forest Soil	GGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCMTAGADLELIPRWIDVGCARAAAARLIPPAGSAQRRVYAWPEAV*
Ga0062388_1016399912	3300004635	Bog Forest Soil	YYRRTAEELKARVAAYYCMAAGADLELIPRWIEVGCSRAAAARLIPPARLVEQQVYAWPEAV*
Ga0070711_1006856393	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAGCRDDLLAQVAGLLIGYYRQTAEESRARAAAYLCLAAGAGPELIPRWVRVGSSRAAAARLIPPAVPRADDVCAWPEAV*
Ga0070732_102637842	3300005542	Surface Soil	GLLMGYYGSTAEEPKADAAAHFCVSAGADLDLIPRWIEVGRRRAAAARQAAGAGPDACGDNPGASI*
Ga0070762_100337284	3300005602	Soil	LLAEVAGLLIGYYRRTAEEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAARMIPPAGSAERQVYAWPEAV*
Ga0075015_1005862301	3300006102	Watersheds	EIVGDRGDLLAEVAGLLIGYYRRTAEEPMARSAAYYCIAAGASLELIPRWVQVGCSRAAAARLIPPAVPDARQQVYAWPEAV*
Ga0075021_111279931	3300006354	Watersheds	RAPTGAETAAAVGELREIAGGRGDLLAEVAGLLIGYYRRTAEEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPPAGSDERQVYAWPEAV*
Ga0116224_105493611	3300009683	Peatlands Soil	AGLLIGYYQRTAEEPMARSAAYYCIAAGASLELIPRWVQVGCSRAAAARLIPPAVPDARQEVYAWPEAV*
Ga0126379_105822951	3300010366	Tropical Forest Soil	LLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLVPRWIETGRSRAAAARLIPPAVPEAQQAYTWPEAV*
Ga0126344_10101571	3300010866	Boreal Forest Soil	VAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEELRARAAAYYCMTAGADLELIPRWIDVGCARATAARLIPPARSVERQVYAWPEAV*
Ga0182041_112892931	3300016294	Soil	VGELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGARLELIPRWIETGCSRAAAARLIPPAVPEAQQVYAWPEAV
Ga0182032_110101521	3300016357	Soil	GGRGDLLAEVAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQAYTWPEAV
Ga0187820_10291901	3300017924	Freshwater Sediment	RRTAEELKARAAAYYCIAAGAGVELIPRWIEVGCSRAAAARLIPPAVPGARQVHAWSEAV
Ga0187820_10334882	3300017924	Freshwater Sediment	AAAVRELREIVGDRGDLLAEVAGLLIGYYRRTAEEPMARSAAYYCIAAGASLELIPRWVQVGCSRAAAARLIPPAVPDARQELYAWPEAV
Ga0187807_11878752	3300017926	Freshwater Sediment	LAEVAGLLIGYYRQTAEEPMARSAAYYCIAAGAGLELIPRWVQVGCTRAAAARLIPPAVPDARQEVYAWPEAV
Ga0187806_10699541	3300017928	Freshwater Sediment	AGLLIGYYRRTTEEPKARAAAYYCMAAGADLDLIPRWIEVGCTRAAAARQIPPAVPEAKQIYTWPEAV
Ga0187806_11134912	3300017928	Freshwater Sediment	YRRTAEELKARAAAYYCIAAGAGVELIPRWIEVGCSRAAAARLIPPAVPGARQVHAWSEA
Ga0187783_109083082	3300017970	Tropical Peatland	RTAEEPKARAAAYYCIVAGASLEPIPRWVQVGCTRAAAARLIPPALPQARQQLYACPEAV
Ga0187810_100588282	3300018012	Freshwater Sediment	IGYYRRTAEELKARAAAYYCIAAGAGVELIPRWIEVGCSRAAAARLIPPAVPGARQVHAWSEAV
Ga0210401_109664001	3300020583	Soil	AGLLIGYYRRTAQEPRARAAAYYCMAAGAELEPIPRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0210401_111229151	3300020583	Soil	EIVGGRGDLLAEVAGLLIGYYRRTAQEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPRAGSAERQVYAWPQAV
Ga0210408_106726552	3300021178	Soil	VAGLLIGYYRRTAEEPMARSAAYYCIAAGASLELIPRWVQVGCSRAAAARLIPPAVPDARQEIYAWPEAV
Ga0210388_111838971	3300021181	Soil	GGRRDLLAEVAGLLIGYYRRTAQEPRARAAAYYCMAAGAELEPIPRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0210388_112290761	3300021181	Soil	GAETAVAVRELRDIAGGRGDLLAELAGLLIGYYRRTAEELKARAAAYYCITAGAGLELIPRWIEVGCSRAAAARLIPPAVPETRQVYDWPEAV
Ga0210386_102180821	3300021406	Soil	ETAGAVAELRGIAGGRGDLLAEVAGLLIGYYRRTPQEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0210386_108789652	3300021406	Soil	EPTGAETAAAVGELREIAGGRGDLLAEVAGLLIGYYRRTAEEPRARAAAYYCMAAGAELELIPRWIEVGFARATAARRIPPARSADRQVYAWPEAV
Ga0210410_110618811	3300021479	Soil	TGAETAAAVSELRGIAGGRGDLLAEVAGLLIGYYRRTAQEPRARAAAYYCMVAGAELELIPRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0242659_10720301	3300022522	Soil	GLLIGYYRRTAQEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPPAGSAERQVYAWPQAV
Ga0222756_10797301	3300022709	Soil	REPTATETAAAVGELREISGGRGDLLAEVAGLLIGYYRRSAEEPRARAAAYYCMAAGAELGLIPRWVEVGCSRAAAARLIPPAGSAERQVYAWPEAV
Ga0242678_10550422	3300022715	Soil	RRTAEELRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0242673_10183911	3300022716	Soil	LLAEVAGLLIGYYRRTAQEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0242675_11303301	3300022718	Soil	AAVAELRGIAGGRGDLLAEVAGLLIGYYRRTPQEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAAQLIPPAGSAERQVYAWPEAV
Ga0242665_101650552	3300022724	Soil	GELREIAGGRGDLLAEVAGLLVGYYRRTAEELRARAAAYYCMAAGAKLELIPRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0224550_10461621	3300022873	Soil	VLAEVAGLLIGYYRRTAEELKARVAAYYCMAAGADLELIPRWIEVGCSRAAAARLIPPARLVDQQVYAWPEAV
Ga0207663_116693521	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAGCRDDLLAQVAGLLIGYYRQTAEESRARAAAYLCLAAGAGPELIPRWVRVGSSRAAAARLIPPAVPRADDVCAWPEAV
Ga0208725_10549881	3300027158	Forest Soil	YRRTAEELKARAAAYYCITAGAGLELIPRWIEVGCSRAAAARLIPPAVPETRQVYDWPEA
Ga0209530_11509191	3300027692	Forest Soil	AALRELREIAGGRADLLAEVAGLLIGYYRRTAEELKARVAAYYCMAAGADLELIPQWIEVGCSRAAAARLIPPAGLVEQQVYAWPEAV
Ga0209772_100569732	3300027768	Bog Forest Soil	ELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCMTAGADLELIPRWIDVGCARAAAARLIPPAGSAQRRVYAWPEAV
Ga0209275_102010791	3300027884	Soil	LAEVAGLLIGYYRRTAEEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAARMIPPAGSAERQVYAWPEAV
Ga0209526_102765482	3300028047	Forest Soil	FAGLLIGYYRRTAEELRARAAAYYCMTAGADLELIPRWIDVGCARAAAARLIPPARSAERQVYAWPEAV
Ga0308309_104697321	3300028906	Soil	LLAEVAGLLIGYYRRTAEEPRARAAAYYCMAAGAELELIPRWIEVGCARATAARLIPPARSADRQVYAWPEAV
Ga0311370_122633601	3300030503	Palsa	YYRQTAGEAKARAAAYYCIVAGAGLDLIPRWVEVGCSRAAAAGLIPPAVPQARKLYEWPEAV
Ga0311357_101078405	3300030524	Palsa	AALRELREIAGGRADVLAEVAGLLIGYYRRTAEELKARVAAYYCMAAGADLELIPRWIEVGCSRAAAARLIPPARLVDQQVYAWPEAV
Ga0311357_115198982	3300030524	Palsa	AGLLIGYYRQTAGEAKARAAAYYCIVAGAGLDLIPRWVEVGCSRAAAARLIPPAVPQARKLYEWPEAV
Ga0170834_1069339601	3300031057	Forest Soil	GREPTGAETAVAVGELREIAGGRGDLLAEVAGLLIGYYRRTAEELRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0265760_102500012	3300031090	Soil	RTAEEPRARAAAYYCMTAGAELRLIPRWIEVGCARVAAARLIPPAGSAERQVYAWPEAV
Ga0170824_1173008831	3300031231	Forest Soil	GREPTGAETAVAVGELREIAGGRGDLLAEVAGLLVGYYRRTAEELRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0318516_107157921	3300031543	Soil	VRELREMAGGRGDLLAEVAGLLIGYYRRTTEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAATARLIPPAVPEAWPVYAWPEAV
Ga0318534_103075352	3300031544	Soil	EIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQVYAWPEAV
Ga0318534_105783472	3300031544	Soil	YYRRTAEEPKARSAVYYCIAAGASLELIPRWVQVGCSRAAAARLIPPAVPEARQPVYAWPEAV
Ga0318573_106754121	3300031564	Soil	GRGDLLAEVAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQAYAWREAV
Ga0318555_102252131	3300031640	Soil	RELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVAGAEQAYAWPEAV
Ga0310686_1199471311	3300031708	Soil	QTAEEARARAAAYHCIVAGAGLDLIPRWVEVGCSRAAAARLIPPAVPEARQLYVWPEAV
Ga0307476_110374891	3300031715	Hardwood Forest Soil	AVGELREIAGGRGDLLAEVAGLLIGYYRRTAEEPRARAAAYYCMAAGAELELIPRWIEVGCARATAARLIPPARSADRQVYAWPEAV
Ga0306917_112982881	3300031719	Soil	GGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCITAGAGLDLIPRWIETGSSRAAAARLIPPAVPEARQAYAWPEAV
Ga0318492_107541272	3300031748	Soil	RGDLLAEVAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQAYAWREAV
Ga0318494_100076404	3300031751	Soil	VAACVRVGTFRGAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQAYTWPEAV
Ga0318554_105010291	3300031765	Soil	LAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVAGAEQAYAWPEAV
Ga0318509_107988261	3300031768	Soil	AVRELREMAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPKAQPVYAWPEAV
Ga0318546_103148701	3300031771	Soil	EPTGAQTADAVGELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGRSRAAAARLIPPAVPEAEQAYAWPEAV
Ga0318546_103678912	3300031771	Soil	GVLIGYYRRTAEEPKARSAAYYCMAAGASLELIPRWVQVGCSRAAAARLIPPAVPEARQPVYAWPEAV
Ga0318498_105600111	3300031778	Soil	VVGGRGDLLAEVAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQAYTWPEAV
Ga0318547_106594162	3300031781	Soil	GLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQVYAWPEAV
Ga0318547_108023731	3300031781	Soil	TATAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCITAGAGLDLIPRWIETGSSRAAAARLIPPAVPEARQAYAWPEAV
Ga0318552_107014661	3300031782	Soil	RRTAEELKARAAAYYCIAAGAGVDLIPRWIETGCSRAAAARRIPPAVPEARRTYAWPEAV
Ga0318529_104446851	3300031792	Soil	GALTATAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCITAGAGLDLIPRWIETGSSRAAAARLIPPAVPEARQAYAWPEAV
Ga0318503_102248671	3300031794	Soil	LREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEARQAYAWPEAV
Ga0318523_100173141	3300031798	Soil	YYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQAYTWPEAV
Ga0318497_102318442	3300031805	Soil	AGLLIGYYRRTAEELKARAAAYYCITAGAGLDLIPRWIETGSSRAAAARLIPPAVPEARQAYAWPEAV
Ga0318497_108807811	3300031805	Soil	VVGGRGDLLAEVAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLHLIPRWIETGCSRAAAARLIPPAVPEAQQAYTWPEAV
Ga0318567_102427381	3300031821	Soil	VGELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCVAAGAGLDLIPRWIETGRSRAAAARLIPPAVPEAEQACAWPEAV
Ga0318567_108395631	3300031821	Soil	GDLLAEVAGVLIGYYRRTAEEPKARSAAYYCMAAGASLELIPRWVQVGCSRAAAARLIPPAVPEARQPVYAWPEAV
Ga0307478_103910932	3300031823	Hardwood Forest Soil	EIAGGRGDLLAEVAGLLIGYYRRTAEEPRARAAAYYCMAAGAELELITRWIEVGCARAAAARLIPPAGSAERQVYAWPEAV
Ga0307478_108192071	3300031823	Hardwood Forest Soil	VAGLLIGYYRRTAEEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPPARSADRQVYAWPEAV
Ga0310917_109159591	3300031833	Soil	TGAQTAAAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCITAGAGLDLIPRWIETGSSRAAAARLIPPAVPEARQAYAWPEAV
Ga0318527_103101661	3300031859	Soil	RTAEEPKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQAYAWREAV
Ga0318536_101368462	3300031893	Soil	LSQQVTTAAAAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGRSRAAAARLIPPAVPEAQQAYTWPEAV
Ga0318551_105964981	3300031896	Soil	TTGALTATAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCITAGAGLDLIPRWIETGSSRAAAARLIPPAVPEARQAYAWPEAV
Ga0318520_110175721	3300031897	Soil	EVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQVYAWPEAV
Ga0306923_115137602	3300031910	Soil	SGWEPSGAPAAAAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGRSRAAAARLIPPAVPEAQQAYTWPEAV
Ga0306926_118057912	3300031954	Soil	GAPAAAAVRELREIADGRGDLLAEVAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQAYAWREAV
Ga0307479_114903451	3300031962	Hardwood Forest Soil	ELREIAGGRGDLLAEVAGLLIGYYRRTAEEPRARAAAYYCMAAGAELELIPRWIEVGCARAAAARLIPPAGSADRQVYAWPEAV
Ga0306922_108771351	3300032001	Soil	GAQTAAAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCITAGAGLDLIPRWIETGSSRAAAARLIPPAVPEARQAYAWPEAV
Ga0306922_116388831	3300032001	Soil	IAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGRSRAAAARLIPPAVPEAEQAYAWPEAV
Ga0318562_104464652	3300032008	Soil	REIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQVYAWPEAV
Ga0318563_102074651	3300032009	Soil	AAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQVYAWPEAV
Ga0318563_106284372	3300032009	Soil	GGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVAGAEQAYAWPEAV
Ga0318569_103374431	3300032010	Soil	REPTGAETAAAVRELREMAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPKAQPVYAWPEAV
Ga0318556_104249361	3300032043	Soil	REIADGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGADLDLIPRWIETGCSRAAAARRIPPAVPEARRTYAWPEAV
Ga0318506_104263551	3300032052	Soil	RRTAEELKARAAAYYCVAAGAGLDLIPRWIETGRSRAAAARLIPPAVPEAEQACAWPEAV
Ga0318504_106579231	3300032063	Soil	LLIGYYRRTAEELKARAAAYYCIAAGAGLDLIPRWIETGCSRAAAARLIPPAVPEAQQVYAWPEAV
Ga0318513_101311942	3300032065	Soil	REIAGGRGDLLAEVAGLLIGYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGRSRAAAARLIPPAVPEAQQAYTWPEAV
Ga0318514_105564931	3300032066	Soil	EPTGAQTAAAVRELREIAGGRGDLLAEVAGLLIGYYRRTAEELKARAAAYYCITAGAGLDLIPRWIETGSSRAAAARLIPPAVPEARQAYAWPEAV
Ga0318524_105588041	3300032067	Soil	RGDLLAEVAGLLIGYYRRTAEELKARAAAYYCIAAGADLDLIPRWIETGCSRAAAARRIPPAVPEARRTYAWPEAV
Ga0318553_100111311	3300032068	Soil	GYYRRTAEEPKARAAAYYCIAAGAGLDLIPRWIETGRSRAAAARLIPPAVPEAQQAYTWPEAV
Ga0348332_132943042	3300032515	Plant Litter	GGRGDLLAEVAGLLIGYYRRTAEEPRARAAAYYCMAAGARLELIPRWIEVGCARGAAARLIPPAGSVERQVYAWPEAV
Ga0335076_101738441	3300032955	Soil	GWEPTGPETAAALAELREIAPGRRDLLAEVAGLLIGYYRRTAEEPRARAAAYYCIAAGAGLELIPRWIQVGRSRAAAARLIPPAVPESRQVYAWPEAV
Ga0318519_101968061	3300033290	Soil	GYYRRTAEELKARAAAYYCITAGAGLDLIPRWIETGSSRAAAARLIPPAVPEARQAYAWPEAV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103364

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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