NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F103245

Metagenome Family F103245

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103245
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 64 residues
Representative Sequence MLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSTTN
Number of Associated Samples 77
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 2.97 %
% of genes near scaffold ends (potentially truncated) 21.78 %
% of genes from short scaffolds (< 2000 bps) 72.28 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (77.228 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(29.703 % of family members)
Environment Ontology (ENVO) Unclassified
(60.396 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(39.604 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.38%    β-sheet: 0.00%    Coil/Unstructured: 47.62%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF04404ERF 12.87
PF11753DUF3310 10.89
PF00149Metallophos 2.97
PF00959Phage_lysozyme 1.98
PF06199Phage_tail_2 1.98
PF05766NinG 0.99
PF12298Bot1p 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A77.23 %
All OrganismsrootAll Organisms22.77 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000756|JGI12421J11937_10125256Not Available665Open in IMG/M
3300002835|B570J40625_101517051Not Available549Open in IMG/M
3300003431|JGI25913J50563_1001216Not Available5188Open in IMG/M
3300006484|Ga0070744_10053178Not Available1185Open in IMG/M
3300006484|Ga0070744_10160874Not Available643Open in IMG/M
3300006805|Ga0075464_10354343Not Available888Open in IMG/M
3300006920|Ga0070748_1316428Not Available553Open in IMG/M
3300007276|Ga0070747_1267419Not Available592Open in IMG/M
3300007542|Ga0099846_1112458Not Available997Open in IMG/M
3300007546|Ga0102874_1244549Not Available544Open in IMG/M
3300007547|Ga0102875_1145203Not Available746Open in IMG/M
3300007550|Ga0102880_1048559Not Available1136Open in IMG/M
3300007559|Ga0102828_1111953Not Available669Open in IMG/M
3300007562|Ga0102915_1261162Not Available560Open in IMG/M
3300007636|Ga0102856_1012713Not Available1185Open in IMG/M
3300007642|Ga0102876_1072382Not Available946Open in IMG/M
3300007653|Ga0102868_1081670Not Available727Open in IMG/M
3300007708|Ga0102859_1013792Not Available2041Open in IMG/M
3300009058|Ga0102854_1069292Not Available1008Open in IMG/M
3300009152|Ga0114980_10012309All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5456Open in IMG/M
3300009152|Ga0114980_10462520Not Available724Open in IMG/M
3300009152|Ga0114980_10751330Not Available544Open in IMG/M
3300009155|Ga0114968_10284191Not Available930Open in IMG/M
3300009158|Ga0114977_10031343All Organisms → Viruses → Predicted Viral3332Open in IMG/M
3300009158|Ga0114977_10204461Not Available1156Open in IMG/M
3300009161|Ga0114966_10064641All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2548Open in IMG/M
3300009165|Ga0105102_10585002Not Available615Open in IMG/M
3300009169|Ga0105097_10606954Not Available616Open in IMG/M
3300009180|Ga0114979_10153276Not Available1409Open in IMG/M
3300009181|Ga0114969_10340186Not Available874Open in IMG/M
3300009183|Ga0114974_10032681All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3583Open in IMG/M
3300009183|Ga0114974_10068824All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Dysgonomonas → unclassified Dysgonomonas → Dysgonomonas sp. 5212325Open in IMG/M
3300009183|Ga0114974_10157891Not Available1414Open in IMG/M
3300009183|Ga0114974_10243657Not Available1078Open in IMG/M
3300009183|Ga0114974_10585014Not Available617Open in IMG/M
3300009194|Ga0114983_1004904All Organisms → Viruses → Predicted Viral4502Open in IMG/M
3300011335|Ga0153698_1790Not Available11763Open in IMG/M
3300011336|Ga0153703_1561All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage12211Open in IMG/M
3300012266|Ga0136712_1021377All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300012665|Ga0157210_1024787Not Available956Open in IMG/M
3300013004|Ga0164293_10259226Not Available1224Open in IMG/M
3300017754|Ga0181344_1031952Not Available1608Open in IMG/M
3300020151|Ga0211736_10770105Not Available645Open in IMG/M
3300020205|Ga0211731_11739107Not Available710Open in IMG/M
3300020525|Ga0207938_1007525All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2070Open in IMG/M
3300020562|Ga0208597_1039108Not Available951Open in IMG/M
3300020565|Ga0208718_1026033Not Available1173Open in IMG/M
3300021961|Ga0222714_10065874Not Available2423Open in IMG/M
3300022543|Ga0212119_1063400All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300024343|Ga0244777_10016396All Organisms → Viruses → Predicted Viral4664Open in IMG/M
3300024346|Ga0244775_10130931Not Available2123Open in IMG/M
3300024348|Ga0244776_10002457All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage18775Open in IMG/M
3300027631|Ga0208133_1101016Not Available674Open in IMG/M
3300027683|Ga0209392_1135844Not Available770Open in IMG/M
3300027693|Ga0209704_1215642Not Available560Open in IMG/M
3300027710|Ga0209599_10084166Not Available835Open in IMG/M
3300027710|Ga0209599_10139049Not Available645Open in IMG/M
3300027733|Ga0209297_1001310Not Available14482Open in IMG/M
3300027754|Ga0209596_1235271Not Available760Open in IMG/M
3300027759|Ga0209296_1006090All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage7637Open in IMG/M
3300027759|Ga0209296_1018947All Organisms → cellular organisms → Bacteria3957Open in IMG/M
3300027759|Ga0209296_1026143All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3263Open in IMG/M
3300027759|Ga0209296_1083887Not Available1562Open in IMG/M
3300027763|Ga0209088_10126599Not Available1148Open in IMG/M
3300027764|Ga0209134_10000055Not Available31277Open in IMG/M
3300027785|Ga0209246_10301837Not Available615Open in IMG/M
3300027797|Ga0209107_10024362All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3475Open in IMG/M
3300027900|Ga0209253_10385079All Organisms → Viruses → Predicted Viral1069Open in IMG/M
3300027973|Ga0209298_10355882Not Available558Open in IMG/M
3300028027|Ga0247722_10021017All Organisms → Viruses → Predicted Viral2686Open in IMG/M
3300031999|Ga0315274_12100838Not Available503Open in IMG/M
3300033233|Ga0334722_10526270Not Available847Open in IMG/M
3300033984|Ga0334989_0043347All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2457Open in IMG/M
3300033984|Ga0334989_0455066Not Available646Open in IMG/M
3300033984|Ga0334989_0473801Not Available628Open in IMG/M
3300033995|Ga0335003_0002859All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage8506Open in IMG/M
3300033996|Ga0334979_0126908Not Available1563Open in IMG/M
3300033996|Ga0334979_0243417Not Available1043Open in IMG/M
3300034022|Ga0335005_0046682All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2932Open in IMG/M
3300034022|Ga0335005_0049223All Organisms → Viruses → Predicted Viral2845Open in IMG/M
3300034022|Ga0335005_0135026Not Available1579Open in IMG/M
3300034022|Ga0335005_0176217Not Available1341Open in IMG/M
3300034022|Ga0335005_0221820Not Available1161Open in IMG/M
3300034050|Ga0335023_0007644Not Available6367Open in IMG/M
3300034050|Ga0335023_0077730Not Available1926Open in IMG/M
3300034050|Ga0335023_0089166Not Available1784Open in IMG/M
3300034051|Ga0335024_0415908Not Available669Open in IMG/M
3300034062|Ga0334995_0139173Not Available1770Open in IMG/M
3300034068|Ga0334990_0090869Not Available1650Open in IMG/M
3300034068|Ga0334990_0617290Not Available568Open in IMG/M
3300034082|Ga0335020_0408972Not Available653Open in IMG/M
3300034093|Ga0335012_0191217Not Available1090Open in IMG/M
3300034093|Ga0335012_0490090Not Available585Open in IMG/M
3300034105|Ga0335035_0144682Not Available1502Open in IMG/M
3300034106|Ga0335036_0194623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. Root1421410Open in IMG/M
3300034107|Ga0335037_0194738Not Available1110Open in IMG/M
3300034107|Ga0335037_0299707Not Available875Open in IMG/M
3300034110|Ga0335055_0378884Not Available588Open in IMG/M
3300034168|Ga0335061_0069538Not Available1876Open in IMG/M
3300034200|Ga0335065_0322786Not Available969Open in IMG/M
3300034284|Ga0335013_0080422Not Available2308Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater29.70%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake21.78%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine11.88%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater3.96%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake3.96%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.96%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine3.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater2.97%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface2.97%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment1.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.98%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.98%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.99%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.99%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000756Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003431Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007546Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02EnvironmentalOpen in IMG/M
3300007547Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02EnvironmentalOpen in IMG/M
3300007550Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3EnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007562Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02EnvironmentalOpen in IMG/M
3300007636Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3EnvironmentalOpen in IMG/M
3300007642Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3EnvironmentalOpen in IMG/M
3300007653Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3EnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300009058Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02EnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009194Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RTEnvironmentalOpen in IMG/M
3300011335Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - GumanEnvironmentalOpen in IMG/M
3300011336Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - PaldangEnvironmentalOpen in IMG/M
3300012266Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA to study Microbial Dark Matter (Phase II) - JTO19cm metaGEnvironmentalOpen in IMG/M
3300012665Freshwater microbial communities from Talbot River, Ontario, Canada - S11EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020525Freshwater microbial communities from Lake Mendota, WI - 05MAR2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020562Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020565Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022543Indian_combined assemblyEnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027683Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027710Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)EnvironmentalOpen in IMG/M
3300027733Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027764Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027785Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028027Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FCEnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033984Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030EnvironmentalOpen in IMG/M
3300033995Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034022Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058EnvironmentalOpen in IMG/M
3300034050Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095EnvironmentalOpen in IMG/M
3300034051Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034068Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031EnvironmentalOpen in IMG/M
3300034082Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088EnvironmentalOpen in IMG/M
3300034093Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072EnvironmentalOpen in IMG/M
3300034105Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034107Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133EnvironmentalOpen in IMG/M
3300034110Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171EnvironmentalOpen in IMG/M
3300034168Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183EnvironmentalOpen in IMG/M
3300034200Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190EnvironmentalOpen in IMG/M
3300034284Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12421J11937_1012525623300000756Freshwater And SedimentMFNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPERTSTTN*
B570J40625_10151705123300002835FreshwaterVQHPITAYKTMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTS
JGI25913J50563_100121623300003431Freshwater LakeMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSSSN*
Ga0070744_1005317833300006484EstuarineMLNFQQEPSFEQGLKDAINKLINQLPGVQKDPYQSRQLHARIQVFKRALQLLDDLPKTTSTTN*
Ga0070744_1016087413300006484EstuarineTMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALELLNDLPERTSSSN*
Ga0075464_1035434313300006805AqueousQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0070748_131642813300006920AqueousTKRGAASYTAYKTMLNFNQEPSFEQGLKDAINKLTNQLAGVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0070747_126741913300007276AqueousMFNYPKEQSFEQGLKDAISKLTNQLQDVQKDPYKFRQVHTRIQVFKRALQLLNDIPERTS
Ga0099846_111245833300007542AqueousMFNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSTTN*
Ga0102874_124454923300007546EstuarineMINYPQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPERTSTTN*
Ga0102875_114520323300007547EstuarineMGKQYLKLNQIDKTKRGAASYTAYKTMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSTTN*
Ga0102880_104855923300007550EstuarineMINYPQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSTTN*
Ga0102828_111195323300007559EstuarineMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0102915_126116213300007562EstuarineMINYTQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDD
Ga0102856_101271333300007636EstuarineMGKQYLKLNQIDKTKRGAASYTAYKTMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPERTSTTN*
Ga0102876_107238213300007642EstuarineMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPERTSTTN*
Ga0102868_108167013300007653EstuarineKQYLKLNQIDKTKRGAASYTAYKTMLNFQQEPSFEQGLKDAINKLTNQLPGVQKDPYKSRQVHARIQVFKRALQLLDDLPERTSTTN*
Ga0102859_101379253300007708EstuarineMINYPQEPSFEQGLKDAINKLTSELARVQKNPYEFRQVHTRIQVFKRALQLLDDLPERTSTTN*
Ga0102854_106929223300009058EstuarineMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSTTN*
Ga0114980_10012309133300009152Freshwater LakeMNFIYKTMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALELLNDLPKTTSTTN*
Ga0114980_1046252023300009152Freshwater LakeMINYPQEQSFEQGLKDAINKLTNQLAGVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0114980_1075133013300009152Freshwater LakeMLNYPQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALELLNDLPERTSSSN*
Ga0114968_1028419133300009155Freshwater LakeMFNYPQEQSFEQGLKDAINKLTNQLPGVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSSSN*
Ga0114977_1003134373300009158Freshwater LakeMINYPQEQSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSSSN*
Ga0114977_1020446123300009158Freshwater LakeMNFINKTMLNFNQEPSFEQGLKDAINKLTSELARVQKNPYEFRQVHTRIQVFKRALQLLDDLPKTTSTTN*
Ga0114966_1006464163300009161Freshwater LakeEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLNDLPERTSSSN*
Ga0105102_1058500223300009165Freshwater SedimentMLNFQQEPSFEQGLKDAINKLTNQLPGVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0105097_1060695423300009169Freshwater SedimentMFNYQQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0114979_1015327623300009180Freshwater LakeMINYPQEQSFEQGLKDAINKLTNQLPSVQKDPFQSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0114969_1034018613300009181Freshwater LakeMFNYQQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLNDLPERTSSSN*
Ga0114974_1003268143300009183Freshwater LakeMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALELLNDLPERTSSSN*
Ga0114974_1006882443300009183Freshwater LakeMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDAYKSRQVHARIQVFKRALELLNDLPERTSSSN*
Ga0114974_1015789153300009183Freshwater LakePSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0114974_1024365713300009183Freshwater LakeMLNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSSSN*
Ga0114974_1058501413300009183Freshwater LakeMINYSQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0114983_1004904113300009194Deep SubsurfaceMINYPQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0153698_1790223300011335FreshwaterPQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVYARIQVFKRALQLLDDLPERTSTTN*
Ga0153703_1561163300011336FreshwaterMFNYPQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVYARIQVFKRALQLLDDLPERTSTTN*
Ga0136712_102137723300012266FreshwaterMITYTQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0157210_102478723300012665FreshwaterMINYQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSSSN*
Ga0164293_1025922623300013004FreshwaterVQHPTTAYKTMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN*
Ga0181344_103195213300017754Freshwater LakeMLNFQQEQSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPERTSTTN
Ga0211736_1077010513300020151FreshwaterMINYPQEQSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPERTSTTN
Ga0211731_1173910733300020205FreshwaterMFNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALELLNDL
Ga0207938_100752513300020525FreshwaterMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0208597_103910823300020562FreshwaterMFNFNQEQSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALELLNDLPERTSSSN
Ga0208718_102603333300020565FreshwaterMLNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0222714_1006587453300021961Estuarine WaterMINYPQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVYARIQVFKRALQLLDDLPERTSTTN
Ga0212119_106340023300022543FreshwaterMITYTQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0244777_1001639693300024343EstuarineMINYPQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPERTSTTN
Ga0244775_1013093143300024346EstuarineMLNFQQEPSFEQGLKDAINKLINQLPGVQKDPYQSRQLHARIQVFKRALQLLDDLPKTTSTTN
Ga0244776_1000245723300024348EstuarineMGKQYLKLNQIDKTKRGAASYTAYKTMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0208133_110101613300027631EstuarineFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALELLNDLPERTSSSN
Ga0209392_113584413300027683Freshwater SedimentQTKIMFNYPKEQSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0209704_121564213300027693Freshwater SedimentLKTKRGAASYTAYKTMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0209599_1008416623300027710Deep SubsurfaceMFNYPKEQSFEQGLRDAINKLTNQLSDVQKDPYLTRQVHTRIQVFKRALQLLNDIPQRTS
Ga0209599_1013904923300027710Deep SubsurfaceMINYSQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPK
Ga0209297_100131083300027733Freshwater LakeMINYPQEQSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSSSN
Ga0209596_123527123300027754Freshwater LakeMFNYQQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLNDLPERTSSSN
Ga0209296_100609023300027759Freshwater LakeMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0209296_101894793300027759Freshwater LakeMINYSQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0209296_102614383300027759Freshwater LakeMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDAYKSRQVHARIQVFKRALELLNDLPERTSSSN
Ga0209296_108388723300027759Freshwater LakeMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVYARIQVFKRALELLDDLPKTTSTTN
Ga0209088_1012659933300027763Freshwater LakeMINYPQEQSFEQGLKDAINKLTNQLPSVQKDPFQSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0209134_10000055413300027764Freshwater LakeMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSSSN
Ga0209246_1030183713300027785Freshwater LakeMFNYQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0209107_1002436293300027797Freshwater And SedimentMFNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPERTSTTN
Ga0209253_1038507923300027900Freshwater Lake SedimentMLNFNQEPSFEQGLKDAINKLTNQLAGVQKDAYKSRQVHARIQVFKRALQLLDDLPERTSTTN
Ga0209298_1035588213300027973Freshwater LakeMLNYPQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALELLNDLPERTSSSN
Ga0247722_1002101763300028027Deep Subsurface SedimentMLNFQQEPSFEQGLKDAINKLTNQLPGVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0315274_1210083823300031999SedimentMLNFNQEPSFEQGLKDAINKLTNQLPGVQKDPYQSRQVHARIQVFKRALQLLDDLPKRTSTTN
Ga0334722_1052627023300033233SedimentMINYPQEQSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0334989_0043347_2087_22783300033984FreshwaterMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSSSN
Ga0334989_0455066_2_1843300033984FreshwaterFQQEPSFEQGLKDAINKLTNQLPGVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0334989_0473801_18_2093300033984FreshwaterMFNYQQEPSFEQGLKDAINKLTNQLPGVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0335003_0002859_3667_38583300033995FreshwaterMFNYPQEPSFEQGLKDAINKLTNQLPSVQKNPYESRQVHTRIQVFKRALQLLNDLPERTSETN
Ga0334979_0126908_357_5483300033996FreshwaterMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0334979_0243417_3_1793300033996FreshwaterQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALELLNDLPERTSSSN
Ga0335005_0046682_14_2053300034022FreshwaterMINYSQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALELLDDLPKTTSTTN
Ga0335005_0049223_2402_25933300034022FreshwaterMINYSQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVYARIQVFKRALQLLDDLPKRTSTTN
Ga0335005_0135026_731_9223300034022FreshwaterMFNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0335005_0176217_1076_12673300034022FreshwaterMFNYQQEPSFEQGLKDAINKLTNQLPGVQKDPYKSRQVYARIQVFKRALQLLDDLPKTTSSSN
Ga0335005_0221820_896_10873300034022FreshwaterMFNYQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLLDDLPKTTSSSN
Ga0335023_0007644_5160_53513300034050FreshwaterMINYPQEQSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0335023_0077730_809_10003300034050FreshwaterMLNFQQEPSFEQGLKDAINKLTNQLPGVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSSSN
Ga0335023_0089166_681_8723300034050FreshwaterMLNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTSSSN
Ga0335024_0415908_92_2833300034051FreshwaterMLNFNQEPSFEQGLKDAINKLTNQLPGVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0334995_0139173_345_5363300034062FreshwaterMLNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVFARIQVFKRALQLLDDLPKTTSTTN
Ga0334990_0090869_485_6763300034068FreshwaterMLNYPQEQSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0334990_0617290_197_3883300034068FreshwaterMFNYPQEPSFEQGLKDAINKLTNQLPGVQKDPYKSRQVYARIQVFKRALQLLDDLPKRTSTTN
Ga0335020_0408972_55_2463300034082FreshwaterMLNFNQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN
Ga0335012_0191217_177_3683300034093FreshwaterMINYSQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0335012_0490090_371_5833300034093FreshwaterKFKQKLTMFNYPQEPSFEQGLKDAINKLTNQLPSVQKNPYESRQVHTRIQVFKRALQLLNDLPERTSETN
Ga0335035_0144682_1009_12003300034105FreshwaterMFNYPQEQSFEQGLKDAINKLTNQLPSVQKDPYKSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0335036_0194623_1247_14083300034106FreshwaterMFNYPQEPSFEQGLKDAINKLTNQLPSVQKNPYESRQVHTRIQVFKRALQLLND
Ga0335037_0194738_1_1803300034107FreshwaterMLNYSQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALQLLDDLPKTTS
Ga0335037_0299707_687_8753300034107FreshwaterMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0335055_0378884_433_5883300034110FreshwaterMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYQSRQVHARIQVFKRALQLL
Ga0335061_0069538_1684_18753300034168FreshwaterMFNFQQEQSFEQGLKDAINKLTNQLPSVQKDPYQSRQVYARIQVFKRALELLNDLPERTSSSN
Ga0335065_0322786_448_6393300034200FreshwaterMFNYQQEPSFEQGLKDAINKLTNQLPGVQKDPYKSRQVYARIQVFKRALQLLDDLPKTTSTTN
Ga0335013_0080422_1859_20803300034284FreshwaterVQHPTTAYKTMLNFQQEPSFEQGLKDAINKLTNQLPSVQKDPYKSRQVHARIQVFKRALQLLDDLPKTTSTTN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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