NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F103202

Metagenome / Metatranscriptome Family F103202

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103202
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 96 residues
Representative Sequence VDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP
Number of Associated Samples 95
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 38.61 %
% of genes near scaffold ends (potentially truncated) 55.45 %
% of genes from short scaffolds (< 2000 bps) 92.08 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (87.129 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(30.693 % of family members)
Environment Ontology (ENVO) Unclassified
(42.574 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(59.406 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 55.79%    β-sheet: 0.00%    Coil/Unstructured: 44.21%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF01066CDP-OH_P_transf 48.51
PF03372Exo_endo_phos 41.58
PF01926MMR_HSR1 3.96
PF06071YchF-GTPase_C 1.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 48.51
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 48.51
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 48.51
COG0012Ribosome-binding ATPase YchF, GTP1/OBG familyTranslation, ribosomal structure and biogenesis [J] 1.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.13 %
UnclassifiedrootN/A12.87 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004156|Ga0062589_102605535Not Available525Open in IMG/M
3300005327|Ga0070658_11662171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia553Open in IMG/M
3300005331|Ga0070670_100770086Not Available868Open in IMG/M
3300005333|Ga0070677_10239033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia896Open in IMG/M
3300005337|Ga0070682_101250768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia628Open in IMG/M
3300005343|Ga0070687_100126290All Organisms → cellular organisms → Bacteria1471Open in IMG/M
3300005345|Ga0070692_10321893All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300005347|Ga0070668_100350789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1249Open in IMG/M
3300005355|Ga0070671_100246196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1518Open in IMG/M
3300005365|Ga0070688_101041843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales652Open in IMG/M
3300005438|Ga0070701_10415199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia856Open in IMG/M
3300005455|Ga0070663_100251811All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1398Open in IMG/M
3300005457|Ga0070662_100959754Not Available731Open in IMG/M
3300005466|Ga0070685_10219200All Organisms → cellular organisms → Bacteria → Terrabacteria group1246Open in IMG/M
3300005535|Ga0070684_100473325All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1159Open in IMG/M
3300005543|Ga0070672_100090272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides2471Open in IMG/M
3300005564|Ga0070664_101474679Not Available644Open in IMG/M
3300005617|Ga0068859_102457492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia574Open in IMG/M
3300005618|Ga0068864_101313116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia724Open in IMG/M
3300005841|Ga0068863_101511049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia680Open in IMG/M
3300006580|Ga0074049_11828537All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300006918|Ga0079216_11517636All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300007004|Ga0079218_12865487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales579Open in IMG/M
3300009098|Ga0105245_11665894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia690Open in IMG/M
3300009148|Ga0105243_12129684All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300009176|Ga0105242_11833715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae646Open in IMG/M
3300009177|Ga0105248_11128598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia886Open in IMG/M
3300009551|Ga0105238_10346055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1475Open in IMG/M
3300010036|Ga0126305_11185284All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300010166|Ga0126306_11103179All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300012900|Ga0157292_10185758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia686Open in IMG/M
3300012903|Ga0157289_10376719Not Available526Open in IMG/M
3300012907|Ga0157283_10113078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.747Open in IMG/M
3300012909|Ga0157290_10127311All Organisms → cellular organisms → Bacteria → Terrabacteria group788Open in IMG/M
3300012914|Ga0157297_10133690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides789Open in IMG/M
3300012939|Ga0162650_100021998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.924Open in IMG/M
3300012955|Ga0164298_11631491Not Available509Open in IMG/M
3300012958|Ga0164299_11491812Not Available527Open in IMG/M
3300012984|Ga0164309_10350529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1083Open in IMG/M
3300012984|Ga0164309_10426322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.996Open in IMG/M
3300012985|Ga0164308_10071001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2341Open in IMG/M
3300012988|Ga0164306_10274171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides1219Open in IMG/M
3300012989|Ga0164305_10151367All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides1574Open in IMG/M
3300013308|Ga0157375_10096109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae3035Open in IMG/M
3300014326|Ga0157380_11415017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides746Open in IMG/M
3300014745|Ga0157377_10068491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2045Open in IMG/M
3300014969|Ga0157376_11641176All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia677Open in IMG/M
3300015077|Ga0173483_10933902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia514Open in IMG/M
3300015201|Ga0173478_10075252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides1179Open in IMG/M
3300015373|Ga0132257_101323449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides915Open in IMG/M
3300017792|Ga0163161_10061173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides2741Open in IMG/M
3300017965|Ga0190266_10790785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia607Open in IMG/M
3300017965|Ga0190266_11361635All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300018432|Ga0190275_11419320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.771Open in IMG/M
3300018466|Ga0190268_10005186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3139Open in IMG/M
3300018469|Ga0190270_10397516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1274Open in IMG/M
3300018476|Ga0190274_13583663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia524Open in IMG/M
3300018481|Ga0190271_11106582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria916Open in IMG/M
3300018920|Ga0190273_10070670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides1847Open in IMG/M
3300018920|Ga0190273_10708667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria782Open in IMG/M
3300019361|Ga0173482_10090249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.1092Open in IMG/M
3300019767|Ga0190267_10386734All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300019767|Ga0190267_10631373All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300019767|Ga0190267_11534396All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300023269|Ga0247773_1038931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1600Open in IMG/M
3300025893|Ga0207682_10069019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1494Open in IMG/M
3300025899|Ga0207642_10591744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia689Open in IMG/M
3300025901|Ga0207688_10136816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides1439Open in IMG/M
3300025909|Ga0207705_11268111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia564Open in IMG/M
3300025926|Ga0207659_10888572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia766Open in IMG/M
3300025930|Ga0207701_10080167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2953Open in IMG/M
3300025931|Ga0207644_10669353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia865Open in IMG/M
3300025935|Ga0207709_11178782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia631Open in IMG/M
3300025938|Ga0207704_10279054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides1269Open in IMG/M
3300025940|Ga0207691_10124059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides2286Open in IMG/M
3300025960|Ga0207651_11438732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia621Open in IMG/M
3300025961|Ga0207712_11221708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria671Open in IMG/M
3300025986|Ga0207658_11444004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia629Open in IMG/M
3300026041|Ga0207639_12245307Not Available507Open in IMG/M
3300026075|Ga0207708_11348667Not Available625Open in IMG/M
3300026089|Ga0207648_10738848Not Available914Open in IMG/M
3300026121|Ga0207683_10406579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1253Open in IMG/M
3300027886|Ga0209486_11228738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia515Open in IMG/M
3300028379|Ga0268266_10764752Not Available933Open in IMG/M
3300028592|Ga0247822_10554965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.915Open in IMG/M
3300028596|Ga0247821_10911115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia585Open in IMG/M
3300028597|Ga0247820_10646032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia733Open in IMG/M
3300028597|Ga0247820_11057067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia581Open in IMG/M
3300028712|Ga0307285_10013601All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides1791Open in IMG/M
3300028802|Ga0307503_10228662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.897Open in IMG/M
3300028810|Ga0307294_10323329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia565Open in IMG/M
3300028812|Ga0247825_11300707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia532Open in IMG/M
3300031170|Ga0307498_10363975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia559Open in IMG/M
3300031229|Ga0299913_10628897Not Available1054Open in IMG/M
3300031547|Ga0310887_10381035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides826Open in IMG/M
3300031852|Ga0307410_10589408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria926Open in IMG/M
3300031908|Ga0310900_11071076All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300032002|Ga0307416_100580619All Organisms → cellular organisms → Bacteria → Terrabacteria group1198Open in IMG/M
3300032004|Ga0307414_10933340Not Available797Open in IMG/M
3300032013|Ga0310906_10688936All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae713Open in IMG/M
3300033551|Ga0247830_11334607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia573Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil30.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil8.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.97%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.97%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.98%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.99%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.99%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.99%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300012900Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1EnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012939Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300023269Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062589_10260553523300004156SoilELTFHVAIRTRSTLVSRADTAYNRDVDPKQARIVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP
Ga0070658_1166217113300005327Corn RhizosphereSTLVSRADRAYNRDVDPKQARIVLIQFALWGVALATIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0070670_10077008613300005331Switchgrass RhizosphereVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLMLVPVVAWGTRLGRDAWPA
Ga0070677_1023903313300005333Miscanthus RhizosphereVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLIVPVVAWGTRLGRDAWPAVGARPDDPPS
Ga0070682_10125076813300005337Corn RhizosphereRELTFHVAIRTRSTLVSGADTAYNRDVDPKQARLVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLMLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0070687_10012629023300005343Switchgrass RhizosphereVLIQFALWGVALATIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAPEARPDDPPSPTSTP*
Ga0070692_1032189323300005345Corn, Switchgrass And Miscanthus RhizosphereVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAPEARPDDPPSPTSTP*
Ga0070668_10035078923300005347Switchgrass RhizosphereVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0070671_10024619623300005355Switchgrass RhizosphereVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0070688_10104184323300005365Switchgrass RhizosphereKQARLVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0070701_1041519913300005438Corn, Switchgrass And Miscanthus RhizosphereVDPKQARLVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPANEARPDDPPSPTSTP*
Ga0070663_10025181113300005455Corn RhizosphereVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP*
Ga0070662_10095975423300005457Corn RhizosphereVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAT
Ga0070685_1021920023300005466Switchgrass RhizosphereVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAPEA
Ga0070684_10047332523300005535Corn RhizosphereVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP*
Ga0070672_10009027223300005543Miscanthus RhizosphereVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLMLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0070664_10147467913300005564Corn RhizosphereVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAPEAHPDDPPSPTSTP*
Ga0068859_10245749213300005617Switchgrass RhizosphereYNRDVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP*
Ga0068864_10131311613300005618Switchgrass RhizosphereDVDPKQARLVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0068863_10151104923300005841Switchgrass RhizosphereSASTRSIRERRELTFHVAIRTRSTLVSRADRAYNRDVDPKQARIVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0074049_1182853713300006580SoilAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP*
Ga0079216_1151763613300006918Agricultural SoilALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP*
Ga0079218_1286548723300007004Agricultural SoilQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPPPTSTP*
Ga0105245_1166589423300009098Miscanthus RhizosphereVAIRTRSTLVSGADTAYNRDVDPKQARLVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLMLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0105243_1212968413300009148Miscanthus RhizosphereVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAPEARPDDPPSPTSTP*
Ga0105242_1183371523300009176Miscanthus RhizosphereVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0105248_1112859823300009177Switchgrass RhizosphereFHVAIRTRSTLVSGADTAYNRDGDPKQARLVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0105238_1034605523300009551Corn RhizosphereVSGADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0126305_1118528423300010036Serpentine SoilVDPKQARIVLTQFALWGVALVAIGGSIAASTRPHTDALGRYSGDEVGFWFGLVITGMGTLLLLVPVVAWGAKLGREAWPAAEARTDDPASPTS
Ga0126306_1110317913300010166Serpentine SoilVDPKQARIVLTQFALWGVALVAIGGSIAASTRPHTDALGRYSGDEVGFWFGLVITGMGTLLLLVPVVAWGAKLGREAWPAAEARTDDPASPTSTP*
Ga0157292_1018575813300012900SoilRDVDPKQARIVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPAVAWGTRLGRDAWPAPEAHPDDPPSPTSTP*
Ga0157289_1037671923300012903SoilELTFHVAIRTRSTLVSGADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRHAWPATEARPDDPPSPTSTP
Ga0157283_1011307823300012907SoilMMSGVPIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0157290_1012731123300012909SoilVDPKQARMALIQFALWGVALVAIGGGIAASTWPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0157297_1013369023300012914SoilVAIRTRSTLVSGADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGNLLMVVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0162650_10002199823300012939SoilVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARADDPPSPTSTP*
Ga0164298_1163149113300012955SoilVDPKQARIVLIQFALWGVALVTIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPD
Ga0164299_1149181213300012958SoilMELTQARKALIQFGLWGVSLAVIGIWIAAATRPHTTPLGLYTGDETGFWFGLIIAWIGSLLLLVSVVAWGVRLCRDAWPARDAVTARPVARSDAAAAP*
Ga0164309_1035052933300012984SoilVSGADTAYNQEVDPKQARLVLIQFALWGVALVTIGGSIAASTRPHTDALGRYSGDETGFWFGLVIALIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP*
Ga0164309_1042632223300012984SoilVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0164308_1007100123300012985SoilVAIRTRSTLVSRADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRHAWPATEARPDDPPSPTSTP*
Ga0164306_1027417123300012988SoilVAIRTRSTLVSGADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0164305_1015136723300012989SoilVDPKQARIVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0157375_1009610923300013308Miscanthus RhizosphereVAIRTRSTLVSRADTAYNQEVDPKQARLVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP*
Ga0157380_1141501723300014326Switchgrass RhizosphereVDPKQARIVLIQFALWGVALATIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0157377_1006849133300014745Miscanthus RhizosphereVDPKQARLVLIQFALWGVALATIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP*
Ga0157376_1164117623300014969Miscanthus RhizosphereWSSASTRSIRERRELTFHVAIRTRSTLVSGADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP*
Ga0173483_1093390213300015077SoilQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP*
Ga0173478_1007525213300015201SoilIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP*
Ga0132257_10132344923300015373Arabidopsis RhizosphereVDPKQARIVLIQFALWGVALTTIGGSIAASTRPHTDALGHYSGDETGFWFGLVIAGIGILLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP*
Ga0163161_1006117323300017792Switchgrass RhizosphereVSGADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0190266_1079078523300017965SoilVAIRTRSTLVSRADTAYNRDVNPKQARIVLTQFALWGVALVAIGGAIAASTRPHTDALGRYSGDEAGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP
Ga0190266_1136163523300017965SoilVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPS
Ga0190275_1141932013300018432SoilVAIRTRSTLVSRAHRAYNRDVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDEAGFWFGLVITGIGTLLLLVPVVAWGTRLGRDAWPPAEARPDDPPSPTSTP
Ga0190268_1000518633300018466SoilVSRADTAYNRDVDPRQARNVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP
Ga0190270_1039751623300018469SoilVSRADTAYNRDVDPKQARNVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTPTP
Ga0190274_1358366313300018476SoilARIVLAQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPVAEARPGDPPSPTSTP
Ga0190271_1110658223300018481SoilVSRADTAYNRDVDPKQARNVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP
Ga0190273_1007067023300018920SoilVDPKQARIALIQFALWGVALVLVGGAIAAATWPHHDSRGSYSGDETGFWFGVLIAWLGTVLVLVPVVAWGAKLGREAWPSRGEVGVAKHDVAAR
Ga0190273_1070866723300018920SoilVLTQFALWGVALVAIGGAIAASTRPHTDALGRYSGDETGFWFGLVIGGIGTLLLLVPVVAWGTRLGRDAWPAAEARADDPPSPTSTP
Ga0173482_1009024913300019361SoilTLVSGADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP
Ga0190267_1038673423300019767SoilVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP
Ga0190267_1063137323300019767SoilVLTQFALWGVALVAIGGAIAASTRPHTDALGRYSGDEAGFWFGLVITGIGTLLLLVPVVAWGTRLGRDAWPAVGPRPDDPPSPTSTP
Ga0190267_1153439613300019767SoilVDPKQARNALIQFALWGVALAVIGGSIAVSTRPHTDELGFYSGDETGFWFGVVIAWLGTLLLLVPFVAWGAKLSREAWPPRAEGQGNS
Ga0247773_103893123300023269Plant LitterVLIQFALWGVALATIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207682_1006901923300025893Miscanthus RhizosphereVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP
Ga0207642_1059174423300025899Miscanthus RhizosphereHVAIRTRSTLVSRADRAYNRDVDPKQARIVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEPRPGDPPSPTSTP
Ga0207688_1013681623300025901Corn, Switchgrass And Miscanthus RhizosphereVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP
Ga0207705_1126811123300025909Corn RhizosphereSTLVSRADRAYNRDVDPKQARIVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207659_1088857213300025926Miscanthus RhizosphereRLVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207701_1008016723300025930Corn, Switchgrass And Miscanthus RhizosphereVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207644_1066935313300025931Switchgrass RhizosphereHVAIRTRSTLVSRADRAYNRDVDPKQARIVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207709_1117878213300025935Miscanthus RhizosphereTSTSCRWSSASTRSIRERRELTFHVAIRTRSTLVSGADTAYNRDVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207704_1027905413300025938Miscanthus RhizosphereRELTFHVAIRTRSTLVSRADTAYNRDVDPKQARIVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAPEARPDDPPSPTST
Ga0207691_1012405923300025940Miscanthus RhizosphereVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207651_1143873213300025960Switchgrass RhizosphereDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207712_1122170823300025961Switchgrass RhizosphereVSRADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTEALGRYSGDETGFWFGLVIAGIGTLLLLVPAVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207658_1144400413300025986Switchgrass RhizosphereYNRDVDPKQARIVLIQFALWGVALATIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLMLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207639_1224530723300026041Corn RhizosphereSCRWSKASTRSIRERRELTFHVAIRTRSTLVSGADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLMLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207708_1134866713300026075Corn, Switchgrass And Miscanthus RhizosphereVSRADTAYNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207648_1073884813300026089Miscanthus RhizosphereVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLMLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0207683_1040657923300026121Miscanthus RhizosphereVSRADTAYNQEVDPKQARLVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAPEARPDDPPSPTSTP
Ga0209486_1122873823300027886Agricultural SoilQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPPPTSTP
Ga0268266_1076475213300028379Switchgrass RhizosphereVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPD
Ga0247822_1055496513300028592SoilWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLMLVPVVAWGTRLGRDAWPATEARPDDPPSPTSTP
Ga0247821_1091111523300028596SoilAYNREVDPKQARLVLIQFALWGTALVAIGGSIAASTRTHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP
Ga0247820_1064603223300028597SoilAYNRDVDPKQARLVLIQFALWGTALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAPEAHPDDPPSPTSTP
Ga0247820_1105706723300028597SoilSTLVSRADTAYNRDVDPKQARIVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP
Ga0307285_1001360133300028712SoilVLAQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPATEARPGDPPSPTSTP
Ga0307503_1022866223300028802SoilGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP
Ga0307294_1032332923300028810SoilYNREVDPKQARIVLTQFALWGVALVAIGGSIAASTWPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAVEARPDDPPSPTSTP
Ga0247825_1130070713300028812SoilKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDEVGFWFGLVIAGMGSLLLLVPVVAWGAKLGREAWPPGD
Ga0307498_1036397513300031170SoilNQEVDPKQARLVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPPSPTSTP
Ga0299913_1062889713300031229SoilVSGADTAYNDVVDPKQARLALIQFALWGIALTVIGGSIAAATWPHTDGLGRYTGDEAGFWFGVVIGWIGTLLVLVPVVAWGAKLGREAWPASHERPGNPVAPRGVHAAS
Ga0310887_1038103523300031547SoilVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP
Ga0307410_1058940823300031852RhizosphereVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDEVGFWFGLLIAGTGTLLLLVPVVAWGTRLGRDAWPTAEARPDDPRSPTSTP
Ga0310900_1107107623300031908SoilVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWP
Ga0307416_10058061923300032002RhizosphereVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDEVGFWFGLVIAGTGTLLLLVPVVAWGTRLGRDAWPTAEARPD
Ga0307414_1093334023300032004RhizosphereVLIQFALWGVALAAIGGSIAASTRPHTDALGRYSGDEVGFWFGLLIAGTGTLLLLVPVVAWGTRLGRDAWPTAEARPDDPRSPTST
Ga0310906_1068893623300032013SoilVLIQFALWGVALVAIGGSIAASTRPHTDALGRYSGDETGFWFGLVIAGIGMLLLLVPVVAWGTRLGRDAWPAAEARPGDPPSPTSTP
Ga0247830_1133460723300033551SoilTLVSRADRAYNREVDTKQARMALIQFALWGVALVAIGGGIAASTWPHSDPLGRYSGDETGFWFGLVIAGIGTLLLLVPVVAWGTRLGRDAWPAAEARPDDPLSPTSTP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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