Metagenome / Metatranscriptome Family F103199

Basic Information
Family ID	F103199
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	78 residues
Representative Sequence	MIWPVLLAAVALIVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAAAPASTTFIPLSSLKR
Number of Associated Samples	84
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.00 %
% of genes near scaffold ends (potentially truncated)	37.62 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (52.475 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.852 % of family members)
Environment Ontology (ENVO)	Unclassified (34.653 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.446 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF07992	Pyr_redox_2	52.48
PF00072	Response_reg	17.82
PF00158	Sigma54_activat	8.91
PF12831	FAD_oxidored	2.97
PF02954	HTH_8	2.97
PF12845	TBD	0.99
PF11067	DUF2868	0.99
PF00723	Glyco_hydro_15	0.99
PF00890	FAD_binding_2	0.99
PF10883	DUF2681	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.47 %
Unclassified	root	N/A	46.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.47 %
Unclassified	root	N/A	46.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.48 %
Unclassified	root	N/A	46.53 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.96 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.96 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.98 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.99 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
unclassified Firmicutes sensu stricto	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto	3.96 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.98 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.98 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Endopterygota	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Coleoptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Polyphaga	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Elateriformia	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Elateroidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Lampyridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Lampyrinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Lampyrinae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Photinus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Lampyrinae → Photinus	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.53 %
Firmicutes bacterium ADurb.Bin373	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	3.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.98 %
Photinus pyralis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Lampyrinae → Photinus → Photinus pyralis	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101844157	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300000956\|JGI10216J12902_108531727	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300000956\|JGI10216J12902_114726561	Not Available	727	Open in IMG/M
3300003995\|Ga0055438_10068881	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300004156\|Ga0062589_101370454	Not Available	688	Open in IMG/M
3300004463\|Ga0063356_105771777	Not Available	531	Open in IMG/M
3300004480\|Ga0062592_100117328	Not Available	1698	Open in IMG/M
3300004480\|Ga0062592_100622811	Not Available	922	Open in IMG/M
3300004480\|Ga0062592_102703832	Not Available	502	Open in IMG/M
3300005093\|Ga0062594_100016690	All Organisms → cellular organisms → Bacteria	2920	Open in IMG/M
3300005293\|Ga0065715_10280260	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300005293\|Ga0065715_10923725	Not Available	567	Open in IMG/M
3300005294\|Ga0065705_10343036	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005295\|Ga0065707_10136333	Not Available	1836	Open in IMG/M
3300005295\|Ga0065707_11007040	Not Available	537	Open in IMG/M
3300005331\|Ga0070670_100232090	All Organisms → cellular organisms → Bacteria → Acidobacteria	1606	Open in IMG/M
3300005332\|Ga0066388_104214570	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005337\|Ga0070682_100875835	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005340\|Ga0070689_100149532	All Organisms → cellular organisms → Bacteria → Acidobacteria	1883	Open in IMG/M
3300005347\|Ga0070668_100643603	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300005467\|Ga0070706_102019127	Not Available	522	Open in IMG/M
3300005535\|Ga0070684_100686853	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005539\|Ga0068853_101228606	Not Available	724	Open in IMG/M
3300005546\|Ga0070696_101796281	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Lampyrinae → Photinus → Photinus pyralis	530	Open in IMG/M
3300005718\|Ga0068866_10079432	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300005719\|Ga0068861_101923671	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300005843\|Ga0068860_100712448	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300005844\|Ga0068862_101842415	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005874\|Ga0075288_1030409	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300006580\|Ga0074049_13122505	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300006604\|Ga0074060_11202753	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300006881\|Ga0068865_100526162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	989	Open in IMG/M
3300009098\|Ga0105245_11753766	Not Available	673	Open in IMG/M
3300009147\|Ga0114129_12786545	Not Available	581	Open in IMG/M
3300009148\|Ga0105243_10208436	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300009148\|Ga0105243_11069446	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300009156\|Ga0111538_11080073	Not Available	1015	Open in IMG/M
3300009162\|Ga0075423_10538803	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1229	Open in IMG/M
3300009162\|Ga0075423_12798045	Not Available	534	Open in IMG/M
3300009551\|Ga0105238_10700497	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300009610\|Ga0105340_1534302	Not Available	524	Open in IMG/M
3300010362\|Ga0126377_13003450	Not Available	544	Open in IMG/M
3300010397\|Ga0134124_10531949	Not Available	1141	Open in IMG/M
3300010399\|Ga0134127_10962882	Not Available	912	Open in IMG/M
3300010399\|Ga0134127_11284329	Not Available	801	Open in IMG/M
3300012469\|Ga0150984_104426363	Not Available	1504	Open in IMG/M
3300012899\|Ga0157299_10088331	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012910\|Ga0157308_10037329	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300012958\|Ga0164299_10181769	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300012960\|Ga0164301_11071400	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300013306\|Ga0163162_10092589	All Organisms → cellular organisms → Bacteria → Acidobacteria	3107	Open in IMG/M
3300013306\|Ga0163162_10571593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	1258	Open in IMG/M
3300013308\|Ga0157375_13324881	Not Available	536	Open in IMG/M
3300014301\|Ga0075323_1040788	Not Available	883	Open in IMG/M
3300014325\|Ga0163163_10762762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300014745\|Ga0157377_11075312	Not Available	614	Open in IMG/M
3300014968\|Ga0157379_10352407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	1348	Open in IMG/M
3300015077\|Ga0173483_10111463	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300015077\|Ga0173483_10974322	Not Available	506	Open in IMG/M
3300015371\|Ga0132258_10754628	All Organisms → cellular organisms → Bacteria → Acidobacteria	2451	Open in IMG/M
3300015371\|Ga0132258_11161304	All Organisms → cellular organisms → Bacteria → Acidobacteria	1952	Open in IMG/M
3300015372\|Ga0132256_102290830	Not Available	644	Open in IMG/M
3300015374\|Ga0132255_100278272	All Organisms → cellular organisms → Bacteria → Acidobacteria	2401	Open in IMG/M
3300017965\|Ga0190266_10685296	Not Available	637	Open in IMG/M
3300018053\|Ga0184626_10273487	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300018072\|Ga0184635_10210870	Not Available	773	Open in IMG/M
3300018429\|Ga0190272_10126804	Not Available	1705	Open in IMG/M
3300018429\|Ga0190272_10307098	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M
3300018429\|Ga0190272_11592379	Not Available	669	Open in IMG/M
3300018429\|Ga0190272_13157895	Not Available	512	Open in IMG/M
3300018481\|Ga0190271_10287331	Not Available	1699	Open in IMG/M
3300019361\|Ga0173482_10021358	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1841	Open in IMG/M
3300022195\|Ga0222625_1420952	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300024055\|Ga0247794_10098174	Not Available	868	Open in IMG/M
3300024055\|Ga0247794_10153067	Not Available	721	Open in IMG/M
3300025899\|Ga0207642_10119418	Not Available	1357	Open in IMG/M
3300025901\|Ga0207688_10083857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1823	Open in IMG/M
3300025901\|Ga0207688_10713726	Not Available	634	Open in IMG/M
3300025910\|Ga0207684_11505776	Not Available	547	Open in IMG/M
3300025911\|Ga0207654_10191113	Not Available	1342	Open in IMG/M
3300025924\|Ga0207694_11558644	Not Available	557	Open in IMG/M
3300025927\|Ga0207687_11892592	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300025930\|Ga0207701_10164856	Not Available	1960	Open in IMG/M
3300025933\|Ga0207706_10118136	All Organisms → cellular organisms → Bacteria	2332	Open in IMG/M
3300025940\|Ga0207691_11624161	Not Available	525	Open in IMG/M
3300025972\|Ga0207668_11062183	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300026095\|Ga0207676_10482801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin373	1174	Open in IMG/M
3300031228\|Ga0299914_10670695	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300031229\|Ga0299913_10418573	Not Available	1327	Open in IMG/M
3300031538\|Ga0310888_10696574	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031547\|Ga0310887_10125879	Not Available	1310	Open in IMG/M
3300031939\|Ga0308174_11701306	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300031941\|Ga0310912_11293932	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031944\|Ga0310884_10039382	Not Available	2056	Open in IMG/M
3300032000\|Ga0310903_10067712	Not Available	1429	Open in IMG/M
3300032001\|Ga0306922_11714590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300032012\|Ga0310902_10052854	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300032075\|Ga0310890_10225582	All Organisms → cellular organisms → Bacteria → Acidobacteria	1302	Open in IMG/M
3300032122\|Ga0310895_10076734	Not Available	1304	Open in IMG/M
3300032144\|Ga0315910_11115819	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.40%
Host-Associated	Host-Associated	39.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.45%
Plants	Host-Associated → Plants	39.60%
Aquatic	Environmental → Aquatic	4.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.82%
Sediment	Environmental → Aquatic → Sediment	2.97%
Freshwater	Environmental → Aquatic → Freshwater	0.99%
Marine	Environmental → Aquatic → Marine	0.99%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.87%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103199

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1018441571	3300000956	Soil	MNWPGILAGVALLVAFWALAKARRTARRLDQLQQAYWDLRYEHGRLKAQVKRLDPDEAEPVAPPANTPSQTFIPLSSLKR*
JGI10216J12902_1085317272	3300000956	Soil	MRSMIWPSLLAGLALLIALWALARARRAARRLDQLQQSYWDLRYEHGRLRAQVNRLDPDEAEQAAEPAAPDPATTFIPLSSLKR*
JGI10216J12902_1147265612	3300000956	Soil	MIWPSLLAGVALLIALWALSKARRATRRLDQLQQSYWDLRYEHGRLRAQVNRLDPEEAQVAAEPPAADPATTFIPLSSLKR*
Ga0055438_100688812	3300003995	Natural And Restored Wetlands	MLLPNILAGLAFVVAVVALSIARGTRRRHERLQQAYWDLRYEHGRLKAQVKRLDPGEPPEPEPAPQASTTFIPLSSIKR*
Ga0062589_1013704542	3300004156	Soil	LVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQQPESPAAPAATTFIPLSSLKR*
Ga0063356_1057717771	3300004463	Arabidopsis Thaliana Rhizosphere	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLRAQVNRLDPEEAQVAAEPPAADPATTFIPLSSLKR*
Ga0062592_1001173281	3300004480	Soil	MIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVQRLDPEEAQQPESPAAPAATTFIPLSSLKR*
Ga0062592_1006228112	3300004480	Soil	LDTPVLDRYCTRLSPSGRTYSMIWPSLLAGVALLIALWALTKARRATRRLDQLQQSYWDLRYEHGRLRAQVKHLDPDEAQTAAEPAAPDPATTFIPLSSLKR*
Ga0062592_1027038321	3300004480	Soil	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEASTTFIPLSSLKR*
Ga0062594_1000166902	3300005093	Soil	MVWLGLLSAVALAVALGAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0065715_102802601	3300005293	Miscanthus Rhizosphere	KMVWLGLLSAVALAVALGAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0065715_109237251	3300005293	Miscanthus Rhizosphere	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLRAQVKRLDPDEAEAVAEPAAAETVTTFIPLSSLKR*
Ga0065705_103430362	3300005294	Switchgrass Rhizosphere	MIWPVLLAAVALIVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAAAPASTTFIPLSSLKR*
Ga0065707_101363331	3300005295	Switchgrass Rhizosphere	FLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPASQSTTFIPLSSLKR*
Ga0065707_110070401	3300005295	Switchgrass Rhizosphere	MIWPVLLAAVALLLALVALASARRTRQRLDQLQQSYWDLRYEHGRLKAQLKRLDPEEAQEPEPAAAPPSTTFIPLSSLKR*
Ga0070670_1002320902	3300005331	Switchgrass Rhizosphere	MIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPATQSTTFIPLSSLKR*
Ga0066388_1042145702	3300005332	Tropical Forest Soil	MVWPGLISALALLVALVALASARRARRRLDQLQQSYWDLRYEHGRLKSQVQRLDPEAPADPPTSAQASTTFIPLSSLKR*
Ga0070682_1008758351	3300005337	Corn Rhizosphere	ALVVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0070689_1001495321	3300005340	Switchgrass Rhizosphere	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPEAAAEPAAPTAPAEA*
Ga0070668_1006436032	3300005347	Switchgrass Rhizosphere	MVWLGLLSAVALAVALAAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0070706_1020191271	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIWPSLLAGVALLIALWALTKARRATRRLDQLQQSYWDLRYEHGRLRAQVKHLDPDEAQAAAEPAAPDPATTFIPLSSLKR*
Ga0070684_1006868531	3300005535	Corn Rhizosphere	AAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0068853_1012286061	3300005539	Corn Rhizosphere	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEATTTFIPLSSLKR*
Ga0070696_1017962812	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEASTTFIPLSSLKR*
Ga0068866_100794321	3300005718	Miscanthus Rhizosphere	MVWLGLLSAVALVVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0068861_1019236712	3300005719	Switchgrass Rhizosphere	MVWLGLLSAVALAVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAPAETQEPAPAASTT
Ga0068860_1007124481	3300005843	Switchgrass Rhizosphere	FKMVWLGLLSAVALAVALGAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0068862_1018424152	3300005844	Switchgrass Rhizosphere	MIWPSLLAGVALLIALWALTKARRATRRLDQLQQSYWDLRYEHGRLRAQVKHLDPDEAQTAAEPAAPDPATTFIPLSSLKR*
Ga0075288_10304092	3300005874	Rice Paddy Soil	MLLPDLLAGLALVVAVVALAVARNAKHRLARVEQQYWDLRYEHGRLKSQMKRLDPEEPREAEPAADPSTTFIPLSSLKR*
Ga0074049_131225052	3300006580	Soil	RFKMVWLGLLSAVALAVELAAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPAAPAETPEPAPAASTTFIPLSSLKR*
Ga0074060_112027531	3300006604	Soil	MVWLGLLSAVALAVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTF
Ga0068865_1005261622	3300006881	Miscanthus Rhizosphere	MVWPALISALALLVALVALTSARRAKRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEAQTTFIPLSSLKR*
Ga0105245_117537661	3300009098	Miscanthus Rhizosphere	MIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPASQSTTFIPLSSLKR*
Ga0114129_127865452	3300009147	Populus Rhizosphere	MGGPVMIWPVLLAAVALLLALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQQPEPAAAPASTTFIPLSSLK
Ga0105243_102084362	3300009148	Miscanthus Rhizosphere	MVWLGLLSAVALVVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQRDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0105243_110694461	3300009148	Miscanthus Rhizosphere	MVWSALISALALLVALVALTSARRARRRLDQLQQPYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEAQTTFIPL
Ga0111538_110800731	3300009156	Populus Rhizosphere	MIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAPEPEAAPAPQSTTFIPLSSLKR*
Ga0075423_105388032	3300009162	Populus Rhizosphere	MGGPVMIWPVLLAAVALLLALVALASARRTRQRLEQLRPSYWALRYEPGRLKAQVKRLDPEEAQQPEPAAAPASTTFIPLSSLKR*
Ga0075423_127980452	3300009162	Populus Rhizosphere	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEATTTFVPLSSLKR*
Ga0105238_107004972	3300009551	Corn Rhizosphere	MVWLGLLSAVALVVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETQEPAPAASTTFIPLSSLKR*
Ga0105340_15343022	3300009610	Soil	MIWPSLLAGAALLTALWALAKARRAARRLDQLQQSYWDLRYEHGRLRAQVKRLDPEEAVGISEPAVPDPATTFIPLSSLKR*
Ga0126377_130034502	3300010362	Tropical Forest Soil	MVWLGLVSVVALALALAAFASARRLRRRLEQLQQSYWDLRYEHGRLKAQVKRLDPEAPAEAPEPAPAASTTFIPLSSLKR*
Ga0134124_105319492	3300010397	Terrestrial Soil	VVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0134127_109628822	3300010399	Terrestrial Soil	MIWPVLLAAVALLVALLALASARRTRRRLEQLQQSYWDLRYEHGRLKAQVKRLDPEDAPEPEPAA
Ga0134127_112843292	3300010399	Terrestrial Soil	MVWLGLLSAVALAVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0150984_1044263632	3300012469	Avena Fatua Rhizosphere	FTMVWLGLVSAVALAVALAAFASIRRLKRRLEQLQQSYWDLRYEHGRLKAQVKRLDPEVAAEAPAESPEPAPAASTTFIPLSSLKR*
Ga0157299_100883312	3300012899	Soil	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEAPTTFIPLSSLKR*
Ga0157308_100373292	3300012910	Soil	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEASTTFIPLS
Ga0157306_103528002	3300012912	Soil	VARLAPRGRARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEASTTFIPLSSLKR*
Ga0164299_101817691	3300012958	Soil	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPEAAAEPAAPTAPAEAQTTFIPL
Ga0164301_110714002	3300012960	Soil	MVWLGLLSTVALAVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0163162_100925895	3300013306	Switchgrass Rhizosphere	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPEAAAEPAAPTAPAEAQTT
Ga0163162_105715932	3300013306	Switchgrass Rhizosphere	MVWLGLLSAVALVVALAAFASLRRLRRRLEPLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0157375_133248811	3300013308	Miscanthus Rhizosphere	MIWPSLLAGVALLVALWALTKARRLTRRLDQLQQSYWDLRYEHGRLRAQVQRLDPDEAPPLSEPAAPDPATTFIPLSSLKR*
Ga0075323_10407881	3300014301	Natural And Restored Wetlands	MLLPDLLAGLALVVALVALAVARNAKHRLARVEQQYWDLRYEHGRLKSQMKRLDPEEPREAEPTADPSTTFIPLSSLKR*
Ga0163163_107627622	3300014325	Switchgrass Rhizosphere	MVWLGLLSAVALAVALAAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLS
Ga0157377_110753121	3300014745	Miscanthus Rhizosphere	MIWPVFLAAVALLVALVALASARRTRQRFEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPASQSTTFIPLSSLKR*
Ga0157379_103524072	3300014968	Switchgrass Rhizosphere	RFKMVWLGLLSTVALAVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR*
Ga0173483_101114631	3300015077	Soil	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEAQTTFIPLSSLKR*
Ga0173483_109743221	3300015077	Soil	MVWSALISALALLVALVALTSSRRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEAQTTFIPLSSLKR*
Ga0132258_107546283	3300015371	Arabidopsis Rhizosphere	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPPEPAAPDEASTTFIPLSSLKR*
Ga0132258_111613042	3300015371	Arabidopsis Rhizosphere	MIWPVLLAAVALLLALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEPAAAPPSTTFIPLSSLKR*
Ga0132256_1022908301	3300015372	Arabidopsis Rhizosphere	ALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEASTTFIPLSSLKR*
Ga0132255_1002782724	3300015374	Arabidopsis Rhizosphere	MVWSALISALALLVALVALTSARRWLLRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPPEPAAPDEASTTFIPLS
Ga0190266_106852961	3300017965	Soil	MIWPVLLAAVALLLALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQAQVQEPDPAAAPPSTTFIPLSSLKR
Ga0184626_102734872	3300018053	Groundwater Sediment	MIWPSLLAGVALLIALWALSKARRATRRLDQLQQSYWDLRYEHGRLRAQVNRLDPEEAQVAAEPAAPDPATTFIPLSSLKR
Ga0184635_102108701	3300018072	Groundwater Sediment	MIWPSLLAGVALLIALWALAKARRAGRRLDQLQQSYWDLRYEHGRLRAQVKRLDPDQAEAASAPVAAAADPAT
Ga0190272_101268042	3300018429	Soil	MIWPSLLAGIALLIAFWALTKARRATRRLDQLQQSYWDLRYEHGRLRAQVKRLDPEEAEAAAEPAAPDPATTFIPLSSLKR
Ga0190272_103070981	3300018429	Soil	MIWPSLLAGIALLIAFWALTKARRATRRLDQLQQSYWDLRYEHGRLRAQVKRLDPDEAEAAAEPAAPDPATTFIPLSSLKR
Ga0190272_115923792	3300018429	Soil	MIWPSLLAGLALLIALWALAKARRAARRLDQLQQSYWDLRYEHGRLRAQVKRLDPEEAAGISEPTAPDPATTFIPLSSLKR
Ga0190272_131578951	3300018429	Soil	MIWPSLLAGVALLIALWALSKARRATRRLDQLQQSYWDLRYEHGRLRAQVNRLDPEEAQVAAEPPAPDPATTFIPLSSLKR
Ga0190271_102873312	3300018481	Soil	LWALAKARRAARRLDQLQQSYWDLRYEHGRLRAQVKALDPSEVEAAAQPMAPDAATTFIPLSSLKR
Ga0173482_100213582	3300019361	Soil	MVWSALISALALLVALVALTSARRARRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEASTTFIPLSSLKR
Ga0222625_14209521	3300022195	Groundwater Sediment	GTFMIWPGLLAGIALLTALAALSIARRTRRRLDQLQQAYWDLRYEHSRLKGQVKRLDPEEAQAPEPAAASPPSQTFIPLSSLKR
Ga0247794_100981741	3300024055	Soil	AVALAVALAAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR
Ga0247794_101530671	3300024055	Soil	MVWSALISALALLVALVALTSARRAKRRLDQLQQSYWDLRYEHGRLKAQVQRLDPETPAEPAAPAEAPTTFIPLSSLKR
Ga0207642_101194181	3300025899	Miscanthus Rhizosphere	MVWLGLLSAVALVVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR
Ga0207688_100838572	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MVWLGLLSAVALAVALGAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR
Ga0207688_107137262	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	WPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPATQSTTFIPLSSLKR
Ga0207684_115057761	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIWPSLLAGVALLIALWALTKARRATRRLDQLQQSYWDLRYEHGRLRAQVKHLDPDEAQAAAEPAAPDPATTFIPLSSLKR
Ga0207654_101911132	3300025911	Corn Rhizosphere	KMVWLGLLSAVALAVALAAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR
Ga0207694_115586441	3300025924	Corn Rhizosphere	MVWLGLLSAVALVVALAAFASIRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETQEPAPAASTTFIPLSSLKR
Ga0207687_118925922	3300025927	Miscanthus Rhizosphere	QVGRYCTRLVRPRRPRMIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPASQSTTFIPLSSLKR
Ga0207701_101648562	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPASQSTTFIPLSSLKR
Ga0207706_101181362	3300025933	Corn Rhizosphere	MIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPATQSTTFIPLSSLKR
Ga0207691_116241611	3300025940	Miscanthus Rhizosphere	ALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPASQSTTFIPLSSLKR
Ga0207668_110621832	3300025972	Switchgrass Rhizosphere	MVWLGLLSAVALAVALAAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR
Ga0207676_104828012	3300026095	Switchgrass Rhizosphere	VAVAVALRAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKQLDPEAPAETPEPAPAASTTFIPLSSLKR
Ga0299914_106706952	3300031228	Soil	MNWSVLLAGAALLVALWALTKARRAARRLDQLQQAYWDLRYEHGRLRAQVKRLDPEEAEAAAAQSDPASTFIPLSSLKR
Ga0299913_104185732	3300031229	Soil	ALWALTKARRAARRLDQLQQAYWDLRYEHGRLRAQVKRLDPEEAEAAAAQSDPASTFIPLSSLKR
Ga0310888_106965742	3300031538	Soil	MIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAPEPEAAPAPQSTTFIPLSSLKR
Ga0310887_101258792	3300031547	Soil	ALIVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAAAPASTTFIPLSSLKR
Ga0308174_117013061	3300031939	Soil	MVWLGLVSAVALAVALAAFASIRRLKRRLEQLQQSYWDLRYEHGRLKAQVKRLDPEVAAEAPAESPEPAPAASTTFIPLSSLKR
Ga0310912_112939321	3300031941	Soil	VALALALAAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVNRLDPEAPAEASEPAPAASTTFIPLSSLKR
Ga0310884_100393822	3300031944	Soil	MIWPVFLAAVALLVALVALASARRTRQRPEQLQQSYWDLRYEHGRLKAQVKRLDPEEAPEPEAAPAPQSTTFIPLSSLKR
Ga0310903_100677122	3300032000	Soil	MIWPVLLAAVALIVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAAAPASTTFIPLSSLKR
Ga0306922_117145901	3300032001	Soil	MVWLGLVSVVALALALAAFASVRRLRRRLEQLQQSYWDLRYEHGRLKAQVKRLDPEAPAEASEPAPAASTTFIPLS
Ga0310902_100528541	3300032012	Soil	MIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAQEPEAAPASQSTTFIPL
Ga0310890_102255821	3300032075	Soil	MIWPVFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAPEPEAAPAPQST
Ga0310895_100767341	3300032122	Soil	VFLAAVALLVALVALASARRTRQRLEQLQQSYWDLRYEHGRLKAQVKRLDPEEAPEPEAAPAPQSTTFIPLSSLKR
Ga0315910_111158191	3300032144	Soil	MNWPGILAGVALLVAFWALAKARRTARRLDQLQQAYWDLRYEHGRLKGQVKRLDPDEAEPVAPPANTPSQTFIPLSSLKR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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