NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F103133

Metagenome Family F103133

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103133
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 69 residues
Representative Sequence MRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRMAAVAAREEFSELSEFLETTRIVTAETPETENIYA
Number of Associated Samples 67
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 10.89 %
% of genes near scaffold ends (potentially truncated) 17.82 %
% of genes from short scaffolds (< 2000 bps) 61.39 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (80.198 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater
(20.792 % of family members)
Environment Ontology (ENVO) Unclassified
(36.634 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(38.614 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.86%    β-sheet: 12.86%    Coil/Unstructured: 54.29%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF01464SLT 22.77
PF12728HTH_17 2.97
PF13481AAA_25 0.99
PF02511Thy1 0.99
PF00145DNA_methylase 0.99
PF07728AAA_5 0.99
PF13578Methyltransf_24 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 0.99
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A80.20 %
All OrganismsrootAll Organisms19.80 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002835|B570J40625_101258232Not Available617Open in IMG/M
3300003860|Ga0031658_1022379Not Available1064Open in IMG/M
3300004481|Ga0069718_16012371Not Available1008Open in IMG/M
3300005805|Ga0079957_1000316All Organisms → cellular organisms → Bacteria41661Open in IMG/M
3300006030|Ga0075470_10000659All Organisms → cellular organisms → Bacteria11012Open in IMG/M
3300006641|Ga0075471_10026328Not Available3389Open in IMG/M
3300006641|Ga0075471_10029649All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3159Open in IMG/M
3300007363|Ga0075458_10234688Not Available560Open in IMG/M
3300007974|Ga0105747_1166584Not Available717Open in IMG/M
3300008055|Ga0108970_10024009Not Available9747Open in IMG/M
3300008114|Ga0114347_1047100Not Available1857Open in IMG/M
3300008117|Ga0114351_1012171Not Available6031Open in IMG/M
3300008117|Ga0114351_1188835Not Available2475Open in IMG/M
3300008259|Ga0114841_1104652All Organisms → Viruses → Predicted Viral2723Open in IMG/M
3300008266|Ga0114363_1006555Not Available5808Open in IMG/M
3300008266|Ga0114363_1011423Not Available4181Open in IMG/M
3300008266|Ga0114363_1154961Not Available756Open in IMG/M
3300008267|Ga0114364_1007927Not Available5118Open in IMG/M
3300008267|Ga0114364_1011238Not Available5138Open in IMG/M
3300008267|Ga0114364_1012607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar33787Open in IMG/M
3300008267|Ga0114364_1032451Not Available2032Open in IMG/M
3300008450|Ga0114880_1076616Not Available1345Open in IMG/M
3300008450|Ga0114880_1152058Not Available832Open in IMG/M
3300009081|Ga0105098_10052968Not Available1658Open in IMG/M
3300009085|Ga0105103_10411278Not Available750Open in IMG/M
3300009085|Ga0105103_10627794Not Available613Open in IMG/M
3300009165|Ga0105102_10059598Not Available1701Open in IMG/M
3300009165|Ga0105102_10737566Not Available556Open in IMG/M
3300009169|Ga0105097_10316724Not Available863Open in IMG/M
3300010354|Ga0129333_10565618Not Available990Open in IMG/M
3300010354|Ga0129333_10750998Not Available835Open in IMG/M
3300011336|Ga0153703_1599Not Available11595Open in IMG/M
3300012012|Ga0153799_1104472Not Available502Open in IMG/M
3300012013|Ga0153805_1092845Not Available513Open in IMG/M
3300012666|Ga0157498_1004539Not Available2303Open in IMG/M
3300013372|Ga0177922_10019237All Organisms → Viruses → Predicted Viral1236Open in IMG/M
3300013372|Ga0177922_10696482Not Available624Open in IMG/M
3300017707|Ga0181363_1012844Not Available1703Open in IMG/M
3300017754|Ga0181344_1217815Not Available533Open in IMG/M
3300017785|Ga0181355_1019217Not Available2988Open in IMG/M
3300017785|Ga0181355_1227291Not Available723Open in IMG/M
3300020544|Ga0207937_1042881Not Available643Open in IMG/M
3300021952|Ga0213921_1045554Not Available658Open in IMG/M
3300021956|Ga0213922_1003638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1024925Open in IMG/M
3300021961|Ga0222714_10001553Not Available25753Open in IMG/M
3300021962|Ga0222713_10545851Not Available685Open in IMG/M
3300021962|Ga0222713_10600180Not Available642Open in IMG/M
3300021962|Ga0222713_10607313Not Available637Open in IMG/M
3300021963|Ga0222712_10069326All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2556Open in IMG/M
3300021963|Ga0222712_10313950Not Available978Open in IMG/M
3300021963|Ga0222712_10714846Not Available562Open in IMG/M
3300022179|Ga0181353_1017164Not Available1884Open in IMG/M
3300022179|Ga0181353_1060540Not Available979Open in IMG/M
3300022179|Ga0181353_1078676Not Available834Open in IMG/M
3300022407|Ga0181351_1008218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1024156Open in IMG/M
3300025585|Ga0208546_1000505All Organisms → cellular organisms → Bacteria14300Open in IMG/M
3300025732|Ga0208784_1177483Not Available625Open in IMG/M
3300027152|Ga0255100_1006751Not Available3144Open in IMG/M
3300027805|Ga0209229_10293866Not Available717Open in IMG/M
3300027899|Ga0209668_10032512All Organisms → cellular organisms → Bacteria2689Open in IMG/M
3300027917|Ga0209536_100058298Not Available5022Open in IMG/M
3300027956|Ga0209820_1000519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar39177Open in IMG/M
3300027972|Ga0209079_10125500Not Available878Open in IMG/M
(restricted) 3300028569|Ga0247843_1065237Not Available1878Open in IMG/M
3300031758|Ga0315907_10006826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar312002Open in IMG/M
3300031758|Ga0315907_10037334Not Available4341Open in IMG/M
3300031758|Ga0315907_10051847All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3607Open in IMG/M
3300031758|Ga0315907_10063130All Organisms → Viruses → Predicted Viral3226Open in IMG/M
3300031758|Ga0315907_10068094Not Available3090Open in IMG/M
3300031784|Ga0315899_10427281Not Available1284Open in IMG/M
3300031787|Ga0315900_10973319Not Available561Open in IMG/M
3300031787|Ga0315900_10988779Not Available554Open in IMG/M
3300031787|Ga0315900_11004056Not Available548Open in IMG/M
3300031857|Ga0315909_10034272Not Available4878Open in IMG/M
3300031857|Ga0315909_10103466Not Available2447Open in IMG/M
3300031857|Ga0315909_10176701Not Available1721Open in IMG/M
3300031857|Ga0315909_10435310Not Available927Open in IMG/M
3300031951|Ga0315904_10001561All Organisms → cellular organisms → Bacteria36600Open in IMG/M
3300031951|Ga0315904_10120530Not Available2715Open in IMG/M
3300031963|Ga0315901_10845676Not Available658Open in IMG/M
3300031963|Ga0315901_11219974Not Available508Open in IMG/M
3300032050|Ga0315906_10209696All Organisms → Viruses → Predicted Viral1825Open in IMG/M
3300032050|Ga0315906_10582063Not Available926Open in IMG/M
3300032116|Ga0315903_10702026Not Available756Open in IMG/M
3300032116|Ga0315903_10703840Not Available755Open in IMG/M
3300033816|Ga0334980_0123529Not Available1069Open in IMG/M
3300033979|Ga0334978_0255485Not Available847Open in IMG/M
3300033981|Ga0334982_0219118Not Available931Open in IMG/M
3300033981|Ga0334982_0413451Not Available611Open in IMG/M
3300033984|Ga0334989_0582864Not Available540Open in IMG/M
3300034012|Ga0334986_0022817All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4236Open in IMG/M
3300034012|Ga0334986_0537801Not Available567Open in IMG/M
3300034063|Ga0335000_0022051All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4789Open in IMG/M
3300034066|Ga0335019_0111239Not Available1829Open in IMG/M
3300034073|Ga0310130_0060472Not Available1127Open in IMG/M
3300034094|Ga0335014_0091654Not Available1543Open in IMG/M
3300034102|Ga0335029_0105239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1021986Open in IMG/M
3300034106|Ga0335036_0026056Not Available4639Open in IMG/M
3300034118|Ga0335053_0308840Not Available990Open in IMG/M
3300034200|Ga0335065_0433553Not Available799Open in IMG/M
3300034283|Ga0335007_0050937Not Available3191Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater20.79%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater15.84%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton10.89%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment7.92%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake7.92%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water6.93%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.94%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.97%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.98%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater1.98%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.98%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.99%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.99%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.99%
Freshwater, Surface IceEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.99%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.99%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.99%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.99%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.99%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary0.99%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003860Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PLEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007974Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2umEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008114Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008259Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300011336Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - PaldangEnvironmentalOpen in IMG/M
3300012012Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300012666Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2EnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300020544Freshwater microbial communities from Lake Mendota, WI - 04SEP2011 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021952Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MGEnvironmentalOpen in IMG/M
3300021956Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MGEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300025585Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025732Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027152Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8dEnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027956Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300033979Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300033984Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034063Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034094Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Sep2000-rr0077EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034118Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165EnvironmentalOpen in IMG/M
3300034200Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
B570J40625_10125823223300002835FreshwaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRNAALAAREEFGELSEFLETTRIVTAETPETENIYA*
Ga0031658_102237913300003860Freshwater Lake SedimentRPIYPQPIHPMRYKIQLSTSTGGWSDLRESANDGQTYEXCLFPTRMAAVAAREEFSELSEFLETTRIVTAETPETENIYA*
Ga0069718_1601237133300004481SedimentMRYKIQIETYNGGWSDLRESSNGGPYEVCLFPTRMAAVQARAEFNELAEYLEGMRIVPAETPETENIYA*
Ga0079957_1000316473300005805LakeMRYKIQMQSANGGWSDLRESSDDGRTYETCLFPTRMAAVAARGEVSELFEFLESLRIVPAETPETENIYA*
Ga0075470_10000659123300006030AqueousMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAALAAREEFSELSEFLETLRIVPAETPETENIYA*
Ga0075471_1002632833300006641AqueousMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRMAAVAAREEFSELSEFLESTRIVTAETPETENIYA*
Ga0075471_1002964923300006641AqueousMRYKIQLETPNGWSDLRESSDGGPYETCFFPSRMAAVRAVEEFSELFENLETLRIVPASVPETENIYCGS*
Ga0075458_1023468833300007363AqueousWSDLRESCDGENYEPCLFPTRNAALAARAEFSELSEFLETTRIVTAETPETENIYA*
Ga0105747_116658423300007974Estuary WaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRMAAVAAREEFSELSEFLETIRIVTAETPETENIYA*
Ga0108970_10024009153300008055EstuaryMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFGELSEFLETTRIVTAETPETENIYA*
Ga0114347_104710033300008114Freshwater, PlanktonMRYKIQIETYNGGWSDLRESSNGGPYEVCLFPTRMAAVAAREEFNELAEYLEGMRIVPANVPETENIYK*
Ga0114351_1012171113300008117Freshwater, PlanktonMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRKAAIAAREEFGELSEFLETLRIVPAETPETENIYA*
Ga0114351_118883563300008117Freshwater, PlanktonMRYKIQMQSANGWSDLRESTDGETYETCLFPTRNAALAAREEFSELSEFLETTRIVTAETPETENIYA*
Ga0114841_110465243300008259Freshwater, PlanktonMRHKIQLSTSTGGWSDLRASYDGENYEPCLFPTRKAALAAREEFGELSEFLETTRIVTAETPETENIYE*
Ga0114363_1006555113300008266Freshwater, PlanktonMRYKIQLETPNGWSNLRESIDGGPYKTCFYPTREIADAAREEFSELSEFLESTRIVPANVPETENIYA*
Ga0114363_101142323300008266Freshwater, PlanktonMRYKIQLETPNGWSNLRESSDGGPYKTCFYPTRMDAVGAVEEFAELLESTRIVPANVPETENIYA*
Ga0114363_115496123300008266Freshwater, PlanktonMRYKIQLETPNGWSNLRESIDGGPYETCYFPTRMAAIRAVEEFSELSEFLESTRIVPANVPETENIYE*
Ga0114364_100792773300008267Freshwater, PlanktonMRYKIQLSTLTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFGELSEFLETTRIVTAETPETENIYA*
Ga0114364_101123883300008267Freshwater, PlanktonMRYKIQLSTSTGGWSDLRASYDGETYETCLFPTRNAALAAREEFSELSEFPETTRIVTAETPETENIYA*
Ga0114364_101260723300008267Freshwater, PlanktonMRYKIQIQSANGWSDLRESANDGQTYETCLFPTRNAALAAREEFGELSEFLETTRIVTAETPETENIYA*
Ga0114364_103245173300008267Freshwater, PlanktonMRYKIQLATSTGGWSDLRESCDGENYEPCLFPTRNAALAAREVFSELSEFLETTRIVTAETPETENIYA*
Ga0114880_107661633300008450Freshwater LakeMRYKIQLETPNGWSNLRESIDGGPYETCYFPTRMAAIRAVEEFAELSEFLESTRIVPANVPETENIYE*
Ga0114880_115205813300008450Freshwater LakeREIMRYKIQLETPNGWSNLRESSDGGPYKTCFYPTRMDAVGAVEEFAELLESTRIVPANVPETENIYA*
Ga0105098_1005296853300009081Freshwater SedimentMRYKIQLSTSTGGWSDLRESSDSQTYETCLFPTRNAALSAREEFGELSEFLETTRIVPAETPETENIYA*
Ga0105103_1041127823300009085Freshwater SedimentMRYKIQLSTSTGGWSDLRESSDDSQTYETCLFPTRKAALAAREEFSELSEFLETTRIVTAETPETENIYA*
Ga0105103_1062779423300009085Freshwater SedimentMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRNAALSAREEFGELSEFLETTRIVTAETPETENIY
Ga0105102_1005959823300009165Freshwater SedimentMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRNAALAAREEFGELSEFLETTRIVTAETPETENIYA*
Ga0105102_1073756613300009165Freshwater SedimentPMCYKIQLSTSTGGWSDLRESSDGENYEPCLFPTRTAALAAREEFGELSEFLETTRIVTAETPETENIYA*
Ga0105097_1031672423300009169Freshwater SedimentMCYKIQLSTSTGGWSDLRESSDGENYEACLFPTRMAAVAAREEFSELSEFLETTRIVTAETPETENIYA*
Ga0129333_1056561833300010354Freshwater To Marine Saline GradientMHYKIQLSTSTGGWSDLRESANDGRTYETCLFPTRKAAIAAREEFSELSEFLETLRIVPAETPETENIYA*
Ga0129333_1075099823300010354Freshwater To Marine Saline GradientMRYKIQLATAYGGWSDLRESSDDGQTYETCLFPTRMAAVAAREEFSELSEFLETMRIVPAETPETENIYA*
Ga0153703_1599123300011336FreshwaterMSRYKIQLETPNGWSDLRESSDGGPYETCFFPTRLAAVRAVEEFSELFENLETLRIVPANTPETENIYCGS*
Ga0153799_110447223300012012FreshwaterRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRKAAIAAREEFGELSEFLETTRIVTAETPETENIYE*
Ga0153805_109284523300012013Surface IceMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFGELSEFLETTRIVTAETPETENIYE*
Ga0157498_100453933300012666Freshwater, Surface IceMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAALAAREEFGELSEFLETTRIVTAETPETENIYA*
Ga0177922_1001923723300013372FreshwaterMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRKAAIAAREEFGELSEFLETTRIVTAETPETENIYA*
Ga0177922_1069648223300013372FreshwaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFSELSEFLETTRIVTAETPETENIYA*
Ga0181363_101284433300017707Freshwater LakeMRYKIQLATSTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFGELSEFLETTRIVTTETPETENIYE
Ga0181344_121781523300017754Freshwater LakeMSRKNPMRYKIQLSTSTGGWSDLRESSDDGQTYETCLFPTRMAAVAAREEFGELSEFLETTRIVTAETPETENIYA
Ga0181355_101921773300017785Freshwater LakeMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRMAAVAAREEFSELSEFLETLRIVPAETPETENIYA
Ga0181355_122729123300017785Freshwater LakeMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRKAALAAREEFSELSEFLETTRIVTAETPETENIYA
Ga0207937_104288123300020544FreshwaterPMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRNAALAAREEFGELSEFLETTRIVTAETPETENIYA
Ga0213921_104555413300021952FreshwaterMPEPIEFNPMRYKIQLATAYGGWSDLRESANDGRTYETCLFPTRNAALAAREEFSELSEFLETTRIVTAETPETENIYA
Ga0213922_1003638103300021956FreshwaterMPEPIEFNPMRYKIQLSTSTGGWSDLRESSDDGRTYETCLFPTRNAAIAAREEFSELSEFLETTRIVTAETPETENIYA
Ga0222714_10001553403300021961Estuarine WaterMRYKIQLETPNGWSDLRESIDGGPYETCFFPTRELADAAREEFSELSEFLESTRIVPASVPETENIYA
Ga0222713_1054585133300021962Estuarine WaterMRYKIQLETCNGGWSDLRESSDGGPYETCFFSSRMAAVRAVEEFSELFENLETLRIVPANTPETENIYA
Ga0222713_1060018013300021962Estuarine WaterVRRNLQIRNPQRLIPMRYKIQLETPNGWSDLRESSDGGPYETCFFPSRMAAVRAVEEFSELFENLETLRIVPANTPETENIYA
Ga0222713_1060731323300021962Estuarine WaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRMAAVAAREEFSELSEFLETMRIVPAETPETENIYA
Ga0222712_1006932633300021963Estuarine WaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRMAAVAAREEFSELSEFLESTRIVTAETPETENIYA
Ga0222712_1031395043300021963Estuarine WaterMRYKIQLETPNGWSDLRESSDGGPYETCFFPSRMAAVRAVEEFSELFENLETLRIVPANTPETENIYA
Ga0222712_1071484623300021963Estuarine WaterMRYKIQLLTSTGGWSDLRESCDGETYETCLFPTRNAALAAREEFSELSEFLESTRIVPASVPETENIYA
Ga0181353_101716423300022179Freshwater LakeMRYKIQLSTSTGGWSDLRESYDGENYEPCLFPTRKAAIAAREEFGELSEFLETTRIVTAETPETENIYA
Ga0181353_106054033300022179Freshwater LakeNPMRYKIQLATSTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFGELSEFLETTRIVTTETPETENIYE
Ga0181353_107867613300022179Freshwater LakeMRYKIQLSTSTGGWSDLRASYDGENYETCLFPTRNAALAAREEFGELSEFLETTRIVTAETPETENIYA
Ga0181351_100821873300022407Freshwater LakeMRYKIQMQSANGWSDLRESSNGGPYEVCLFPTRMAAVQARAEFNELAEYLEGMRIVPAETPETENIYA
Ga0208546_1000505183300025585AqueousMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAALAAREEFSELSEFLETLRIVPAETPETENIYA
Ga0208784_117748323300025732AqueousMRYKIQLETPNGWSDLRESSDGGPYETCFFPSRMAAVRAVEEFSELFENLETLRIVPASVPETENIYCGS
Ga0255100_100675163300027152FreshwaterMRYKIQLSTSTGGWSDLRESSDDGQTYETCLFPTRNAALAAREEFGELSEFLETTRIVTAETPETENIYA
Ga0209229_1029386623300027805Freshwater And SedimentMRYKIQLATSTGGWSDLRESCDGENYEPCLFPTRNAALAARAEFSELSEFLETTRIVTAETPETENIYA
Ga0209668_1003251233300027899Freshwater Lake SedimentMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRMAAVAAREEFSELSEFLETTRIVTAETPETENIYA
Ga0209536_10005829893300027917Marine SedimentMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAALAAREEFSELSEFLETTRIVTTETPETENIYA
Ga0209820_1000519123300027956Freshwater SedimentMRYKIQLSTSTGGWSDLRESSDSQTYETCLFPTRNAALSAREEFGELSEFLETTRIVPAETPETENIYA
Ga0209079_1012550023300027972Freshwater SedimentMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRNAALSAREEFGELSEFLETTRIVTAETPETENIYA
(restricted) Ga0247843_106523733300028569FreshwaterMRYKIQLATSTGGWSDLRASYDGENYEPCLFPTRMAAVQARAEFNELAEYLEGMRIVPAETPETENIYA
Ga0315907_10006826233300031758FreshwaterMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRKAAIAAREEFGELSEFLETLRIVPAETPETENIYA
Ga0315907_1003733493300031758FreshwaterMRYKIQIETYNGGWSDLRESSNGGPYEVCLFPTRMAAVAAREEFNELAEYLEGMRIVPANVPETENIYK
Ga0315907_1005184733300031758FreshwaterMRYKIQLETPNGWSNLRESSDGGPYKTCFYPTRMDAVGAVEEFAELLESTRIVPANVPETENIYA
Ga0315907_1006313083300031758FreshwaterMRYKIQIETYNGGWSDLRESSNGGPYEVCLFPTRMAAVQARAEFNELAEYLEGMRIVPAETPETENIYA
Ga0315907_1006809483300031758FreshwaterMRYKIQMQSANGWSDLRESTDGETYETCLFPTRNAALAAREEFSELSEFLETTRIVTAETPETENIYA
Ga0315899_1042728143300031784FreshwaterMRYKIQLSTLTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFSELSEFLETTRIVTAETPETENIYA
Ga0315900_1097331923300031787FreshwaterMRHKIQLSTSTGGWSDLRASYDGENYEPCLFPTRKAALAAREEFGELSEFLETTRIVTAETPETENIYE
Ga0315900_1098877923300031787FreshwaterMRYKIQLSTLTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFGELSEFLETTRIVTAETPETENI
Ga0315900_1100405623300031787FreshwaterMRYKIQIETYNGGWSDLRESSNGGPYEVCLFPTRMAAVAAREEFNELAEYLEGMRIVPAN
Ga0315909_10034272103300031857FreshwaterMRYKIQLETPNGWSNLRESIDGGPYKTCFYPTREIADAAREEFSELSEFLESTRIVPANVPETENIYA
Ga0315909_1010346633300031857FreshwaterMRYKIQLETPNGWSNLRESIDGGPYETCYFPTRMAAIRAVEEFAELSEFLESTRIVPANVPETENIYE
Ga0315909_1017670123300031857FreshwaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAALAARKEFSELSEFLETTRIVTAETPETENIYA
Ga0315909_1043531033300031857FreshwaterMRYKIQLSTSTGGWSNLRESANDGQTYETCLFPTRKAAIAAREEFGELSEFLETTRI
Ga0315904_1000156193300031951FreshwaterLDCRQLDCRSLKPYAREIMRYKIQLETPNGWSNLRESSDGGPYKTCFYPTRMDAVGAVEEFAELLESTRIVPANVPETENIYA
Ga0315904_1012053063300031951FreshwaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFSELSEFLETTRIVTAETPETENIYA
Ga0315901_1084567633300031963FreshwaterTSTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFSELSEFLETTRIVTAETPETENIYA
Ga0315901_1121997423300031963FreshwaterMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRKAAIAAREEFSELSEFLETTRIVTAETPETENI
Ga0315906_1020969663300032050FreshwaterMRYKIQLETPNGWSNLRESSDGGPYKTCFYPTRMDAVGAVEEFAELLESTRIVPANVPETENIYE
Ga0315906_1058206323300032050FreshwaterMRYKIQLSTSTGGWSNLRESANDGQTYETCLFPTRKAAIAAREEFGELSEFLETTRIVTAETPETENIYA
Ga0315903_1070202623300032116FreshwaterMRYKIQLSTLTGGWSDLRESANDGQTYETCLFPTRKAAIAAREEFGELSEFLETTRIVTAETPETENIYA
Ga0315903_1070384013300032116FreshwaterMRYKIQIETYNGGWSDLRESSNGGPYEVCLFPTRMAAVQARAEFNELAEYLEGMRIVPAE
Ga0334980_0123529_693_9053300033816FreshwaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAALAAREEFSELSEFLETMRIVPAETPETENIYA
Ga0334978_0255485_314_5233300033979FreshwaterMRYKIQLLTSTGGWSDLRESCDGENYEPCLFPTRNAALAARAEFSELSEFLETTRIVTAETPETENIYA
Ga0334982_0219118_687_8963300033981FreshwaterMRYKIQIETYNGGWSDLRESSNGGPYEVCLFPTRMAAVQARAEFNELAEYLEGMRIVPTETPETENIYV
Ga0334982_0413451_299_5113300033981FreshwaterMRYKIQLSTSTGGWSDLRESSDDGQTYETCLFPTRNAALAARDEFGELSEFLETLRIVPAETPETENIYA
Ga0334989_0582864_3_1943300033984FreshwaterMRYKIQLSTSTGGWSDLRESSDDGQTYETCLFPTRNAALAARDEFGELSEFLETTRIVTAETPE
Ga0334986_0022817_999_12083300034012FreshwaterMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRMAAVAAREEFSELSEFLESLRIVPAETPETENIYA
Ga0334986_0537801_279_4913300034012FreshwaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRKAALSAREEFSELSEFLETMRIVPAETPETENIYA
Ga0335000_0022051_3048_32603300034063FreshwaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRNAALAAREEFGELSEFLETTRIVTAETPETENIYA
Ga0335019_0111239_229_4383300034066FreshwaterMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRNAALAAREEFGELSEFLETTRIVTAETPETENIYA
Ga0310130_0060472_919_11253300034073Fracking WaterMTRYKIQIQSANGWSDLRESSDGGPYETCLFPTRMAAVEARGEFSELFEFLESLRIVPAETPETENIYA
Ga0335014_0091654_1216_14283300034094FreshwaterMRYKIQLSTSTGGWSDLRESANDGQTYETCLFPTRNAALAAREEFSELSEFLETMRIVPAETPETENIYA
Ga0335029_0105239_771_9803300034102FreshwaterMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRKAALAAREEFSELSEFLETMRIVPAETPETENIYA
Ga0335036_0026056_1419_16283300034106FreshwaterMRYKIQIETYNGGWSDLRESSDGGPYEVCLFPTRMAAVQARAEFNELAEYLEGMRIVPAETPETENIYA
Ga0335053_0308840_808_9903300034118FreshwaterMRYKIQLSTSTGGWSDLRASYDGENYEPCLFPTRNAALAAREEFGELSEFLETTRIVPAE
Ga0335065_0433553_9_2213300034200FreshwaterMRYKIQLSTSTGGWSDLRESSDDGQTYETCLFPTRNAALAARDEFGELSEFLETTRIVTAETPETENIYE
Ga0335007_0050937_1718_19273300034283FreshwaterMRYKIQLSTSTGGWSDLRESSDGENYEPCLFPTRNAALAAREEFSELSEFLETMRIVPAETPETENIYA


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