Metagenome Family F103057

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103057
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	68 residues
Representative Sequence	LVKKYFGDTIVKRIPLNSDREVIETFVDNVRFTKDKAGFATDDPRFNPDDLPEFKHGGLAKILEV
Number of Associated Samples	46
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	16.83 %
% of genes from short scaffolds (< 2000 bps)	14.85 %
Associated GOLD sequencing projects	33
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.010 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (93.069 % of family members)
Environment Ontology (ENVO)	Unclassified (97.030 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.020 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 23.08% Coil/Unstructured: 76.92%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00847	AP2	2.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
All Organisms	root	All Organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
cellular organisms	root	All Organisms → cellular organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.99 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006751\|Ga0098040_1026747	Not Available	1856	Open in IMG/M
3300006754\|Ga0098044_1050575	Not Available	1772	Open in IMG/M
3300006789\|Ga0098054_1086391	Not Available	1180	Open in IMG/M
3300006789\|Ga0098054_1178453	Not Available	778	Open in IMG/M
3300006793\|Ga0098055_1029832	Not Available	2266	Open in IMG/M
3300006925\|Ga0098050_1122874	Not Available	659	Open in IMG/M
3300006929\|Ga0098036_1016018	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2388	Open in IMG/M
3300008050\|Ga0098052_1065434	Not Available	1532	Open in IMG/M
3300008050\|Ga0098052_1079290	Not Available	1363	Open in IMG/M
3300008050\|Ga0098052_1377225	Not Available	529	Open in IMG/M
3300010150\|Ga0098056_1036530	Not Available	1719	Open in IMG/M
3300010150\|Ga0098056_1181519	Not Available	706	Open in IMG/M
3300010151\|Ga0098061_1112838	Not Available	1006	Open in IMG/M
3300012953\|Ga0163179_10410038	Not Available	1101	Open in IMG/M
3300025066\|Ga0208012_1008647	Not Available	1881	Open in IMG/M
3300025118\|Ga0208790_1074563	Not Available	1024	Open in IMG/M
3300025141\|Ga0209756_1063065	Not Available	1741	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	99.01%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	98.02%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.99%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	93.07%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.97%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.99%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.99%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.99%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025293	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25132J35274_10283771	3300002483	Marine	PLVLVKKYFGDEIVKRLPLDTRTEVIDTFVDNVRFTKDKRGFRTDEPGFDPDNLPEFKHGGLAKILEV*
JGI25133J35611_100557141	3300002514	Marine	ALGDPLILVKKYFGDTIVKRLPLNSDREVIETFVDNVRFTKDKAGFSTDDPRFNPDDLPEFKHGGLAQILEV*
JGI25133J35611_100582181	3300002514	Marine	LVLVKKYFGDEIAKRIPLDTRTEVIETFVDNVRFTKDRAGFATDDPRFNPDDLPEFAHGGLAKILEV*
JGI25133J35611_101550062	3300002514	Marine	SEADYKHVMEGGGGALGDPLIIVKKYFGDTIAKRLPLDTRAEVIDTFVENVRFAKDXAGRLTDDPRFNPDDIPEFKHGGLAKILEV*
Ga0098035_10715362	3300006738	Marine	PLVLVKKYFGDEIAKRIPLDTRTEVIETFVDNVRFTKDRAGFRTDDPRFNPDDLPEFAHGGLAKILEV*
Ga0098040_10267471	3300006751	Marine	RIPLNSDREVIDAFVDNVRFTKDKAGFSTDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098040_10555692	3300006751	Marine	VKKYFGDEIAKRIPLDTRTEVMETFVDNVRFTKDRAGFRTDDPRFNPDDLPEFAHGGLAKILEV*
Ga0098039_10275692	3300006753	Marine	PLVLVKKYFGDEIAKRIPLDTRTEVIETFVDNVRFTKDRAGRLTDDPRFNPDDLPEFAHGGLAKILEV*
Ga0098039_12100242	3300006753	Marine	VKKYFGDEIAKRIPLDTRTEVMETFVDNVRFAKDRAGFRTDDPRFNPDDIPEFKHGGLAQILEV*
Ga0098039_12547781	3300006753	Marine	GGGALGDPLIIVKKYFGDEIARRVPLDSRVEIIDAFVDNVRFTKDRAGFRTDDPRFNPDDIPEFKHGGLAKILEV*
Ga0098039_12625311	3300006753	Marine	GGALGDPLVLVKKYFGDEIAKRIPLDTRTEVIETFVDNVRFAKDRAGFATDDPRFNPDDLPEFAHGGLAKILEV*
Ga0098044_10355552	3300006754	Marine	LGDPLILVKKYFGDTIAKRIPLNSDREVIETFVENVRFTKDRGGFATDDPRFNPDDLPEFKHGGLAQILEV*
Ga0098044_10387442	3300006754	Marine	LVLVKKYFCDEIAKRIPLETRTEVMETFVDNVRFTKDRGGFATDDPRFNPDDLPEFAHGGLAKILEV*
Ga0098044_10505751	3300006754	Marine	IAKRIPLNSDRVVIEEFVDNVRFTKDKAGFPTDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098044_10526272	3300006754	Marine	LVKKYFGDTIAKRIPLNSDREVIETFVDNVRFTKDRTGFNTDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098054_10226942	3300006789	Marine	GALGDPLILVKKYFGDTIVKRLPLNSDKEVIETFVENVRFTKDKAGFPNDDPRFNPDDLPDFKHGGLAKILEV*
Ga0098054_10237931	3300006789	Marine	HVMEGGGGALGDPLIIVKKYFGDTIAKRLPLDTRAEVIDTFVENVRFTKDRAGRLTDDPRFNPDDIPEFKHGGLAKILEV*
Ga0098054_10720691	3300006789	Marine	YKYIMEGGGGALGDPLVLVKKYFGNEIAKRIPVNADREVIDTFVENVRYTKDKSGFRNDDPRFNPDEIPEFKNGGLAQILEI*
Ga0098054_10863912	3300006789	Marine	IVKRLPLNSDREVIETFVDNVRFTKDKAGFATDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098054_10883032	3300006789	Marine	ALGDPLILVKKYFGDTIVKRLPLNSDKEVIDTFVENVRFTKDRAGFPNDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098054_11147612	3300006789	Marine	KYIMEGGGGALGDPLVLVKKYFGDTIVKRIPLNSDREVIDAFVDNVRFTKDKAGFSTDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098054_11784531	3300006789	Marine	TIAKRIPLDTRTEVMETFVDNVRFTKDRAGFRTDDPRFNPDDIPEFKHGGLAKILEV*
Ga0098055_10298321	3300006793	Marine	AKRIPLNSDREVIETFVDNVRFTKDKGGFATDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098055_10337232	3300006793	Marine	IMEGGGGALGDPLILVKKYFVDTIVKRLPLNSDKEVIETFVENVRFTKDKAGFPNDDPRFNPDDLPDFKHGGLAKILEV*
Ga0098060_11071411	3300006921	Marine	EGGGGALGDPLILVKKYFGDEVAKRIPLNSDRVVIEEFVDNVRFTKDKGGFATDDPRFNPDDLPEFKHGGLAQILEV*
Ga0098053_11199032	3300006923	Marine	GDTIAKRIPLNSDRVVIEEFVDNVRFTKDKAGFATDDPRFNPDDLPEFKHGGLAQILEV*
Ga0098051_10850321	3300006924	Marine	EGGGGALGDPLILVKKYFGDTIVKRLPLNSDREVIETFVDNVRFTKDKGGFSTDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098051_11673762	3300006924	Marine	SEKDYKYIMEGGGGALGDPLVLVKKYFGNEIAKRIPVNADREVIDTFVENVRFTKDKSGFRNDDPRFNPDEIPEFKNGGLAQILEI*
Ga0098050_11228741	3300006925	Marine	AKRIPLNSDREVIETFVDNVRFTKDKAGFPTDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098034_10217911	3300006927	Marine	PLVLVKKYFGDEIAKRIPLDTRTEVMETFVDNVRFTKDRAGFRTDDPRFNPDDLPEFAHGGLAKILEV*
Ga0098041_10179362	3300006928	Marine	GDPLILVKKYFGDEVAKRIPLNSDRVVIEEFVDNVRFTKDKGGFATDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098041_10269322	3300006928	Marine	TIAKRIPLNSDRTVIEEFVDNVRFTKDKAGFATDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098041_11960172	3300006928	Marine	GDPLILVKKYFGDTIAKRIPLNSDRVVIEEFVDNVRFTKDKGGFATDDPRFNPDDLPEFKHGGLAQILEV*
Ga0098036_10160181	3300006929	Marine	IAKRLPLDTRAEVIDIFVDNVRFTKDRAGFRTDDPRFNPDDIPEFKHGGLAKILEV*
Ga0098052_10371671	3300008050	Marine	KYFGDTIVKRLPLNSDREVIETFVDNVRFTKDKGGFATDDPRFNPDDLPEFKHGGLAQILEV*
Ga0098052_10449852	3300008050	Marine	FGDEIARRLPLNSDKEIIETFVDNVRFTKDRAGFATDDPRFNPDDLPEFKHGGLAKILEV
Ga0098052_10477181	3300008050	Marine	KYFGDTIAKRIPLNSDREVIETFVDNVRFTKDRTGFNTDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098052_10654341	3300008050	Marine	IAKRIPLNSDREVIDTFVENVRFTKDRAGFPNDDPRFNPDDLPEFKHGGLAQILEV*
Ga0098052_10792901	3300008050	Marine	IAKRIPLDTRTEVIETFVDNVRFTKDRAGRLTDDPRFNPDDLPEFAHGGLAKILEV*
Ga0098052_10876102	3300008050	Marine	KKYFGDEIAKRIPLDTRTEVIETFVDNVRFTKDRAGFRTDDPRFNPDDLPEFAHGGLAKILEV*
Ga0098052_12123521	3300008050	Marine	KYFGDTIVKRLPLNSDREVIETFVDNVRFTKDKAGFATDDPRFNPDDLPDFKHGGLAKILEV*
Ga0098052_13772251	3300008050	Marine	IAKRIPLDTRTEVIETFVDNVRFAKDRAGFATDDPRFNPDDLPEFAHGGLAKILEV*
Ga0114903_11051671	3300009412	Deep Ocean	YFGDEIARRVPLDSRVEIIDAFVDNVRFTKDRAGFRTDDPRFNPDDIPEFKHGGLAKILEV*
Ga0114932_108472942	3300009481	Deep Subsurface	DPLVLVKKYFGDEIAKRIPLDTRTEVIEEFVNNVRFTKDRAGFQTDDPRFNPDDIPEFKHGGLAQILEV*
Ga0115011_111214182	3300009593	Marine	EGGGGALGDPLVLVKKYFGNEIAKRIPINADREMIDTFVENVRYTKDRSGFRNDDPRFNPDDIPEFKNGGLAKILEV*
Ga0098049_10312142	3300010149	Marine	DYKYIMEGGGGALGDPLILVKKYFGDEIARRLPLNSDREIIETFVDNVRFTKDRAGFATDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098049_10421522	3300010149	Marine	DPLILVKKYFGDTIVKRLPLNSDREVIDTFVENVRFTKDRAGFPNDDPRFNPDDLPEFKHGGLAHILEV*
Ga0098049_10855462	3300010149	Marine	LVKKYFGDTIVKRIPLNSDREVIETFVDNVRFTKDKAGFATDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098056_10261952	3300010150	Marine	LESVISEKDYKYIMEGGGGALGDPLVLVKKYFGDEIAKRIPVNADREVIDTFVENVRFTKDKSGFRNDDPRFNPDDLPEFKHGGLAQILEI*
Ga0098056_10289361	3300010150	Marine	ALGDPLILVKKYFGDTIAKRIPLDTRAEVIDTFVDNVRFTKDRAGFRTDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098056_10365301	3300010150	Marine	KRLPLNSDRVVIEEFVDNVRFTKDKAGFATDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098056_10541761	3300010150	Marine	KYFGDTIAKRIPLNSDREVIETFVDNVRFTKDKGGFATDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098056_11734382	3300010150	Marine	GALGDPLILVKKYFGDTIAKRIPLNSDRVVIEEFVDNVRFTKDKAGFATDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098056_11815192	3300010150	Marine	IVKRLPLSSDREVIETFVDNVRFTKDRAGFPTDDPRFNPDDLPEFKHGGLAQILEV*
Ga0098061_11128382	3300010151	Marine	AKRIPLNSDRVVIEEFVDNVRFTKDRAGFPNDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098059_10395181	3300010153	Marine	DPLILVKKYFGDTIAKRIPLNSDRVVIEEFVDNVRFTKDKAGFPTDDPRFNPDDLPEFKHGGLAKILEV*
Ga0098059_10888231	3300010153	Marine	GDPLVLVKKYFGDEIAKRIPLDTRTEVMETFVDNVRFAKDRAGFRTDDPRFNPDDIPEFKHGGLAQILEV*
Ga0163108_107487471	3300012950	Seawater	FGDEIAKRIPLDTRTEVIETFVDNVRFTKDRAGFATDDPRFNPDDLPEFAHGGLAKILEV
Ga0163179_104100381	3300012953	Seawater	IARRIPLDTRTEVMETFVDNVRFTKDRAGFQTDDPRFNPDDIPEFKHGGLAKILEV*
Ga0181367_10042331	3300017703	Marine	TPTDYKYIMEGGGGALGDPLILVKKYFGDTIAKRIPLDTRTEVIETFVDNVRFTKDKAGRLTDDPRFNPDDLPEFAHGGLAKILEV
Ga0181375_10346451	3300017718	Marine	LVLVQKYFGDEIAKRIPLDSSTEVIDAFVDNVRYAKDRSGHLTSDPGFNPDDISEFAEGGLAKILEV
Ga0181373_10901402	3300017721	Marine	GGGALGDPLILVKKYFGDTIARRIPLNSDREVIETFVDNVRFTKDRAGFATDDPRFNPDDLPEFKHGGLAQILEV
Ga0181373_10918332	3300017721	Marine	TIAKRLPLDTRAEVIDTFVENVRFAKDRAGRLTDDPRFNPDDIPEFKHGGLAKILEV
Ga0208012_10078502	3300025066	Marine	VLVKKYFGDTIAKRIPLNSDREVIETFVDNVRFTKDKGGFATDDPRFNPDDLPEFKHGGLAKILEV
Ga0208012_10086471	3300025066	Marine	TIAKRIPLNSDKEVIDTFVENVRFTKDRSGFPNDDPRFNPDDLPEFKHGGLAQILEV
Ga0208011_10210691	3300025096	Marine	PLVLVKKYFGDEIAKRIPLDTRTEVMETFVDNVRFTKDKAGRLTDDPRFNPDDLPEFAHGGLAKILEV
Ga0208011_10563162	3300025096	Marine	KYFGDTIVKRLPLNSDREVIDTFVENVRFTKDRAGFATDDPRFNPDDLPEFKHGGLAQILEV
Ga0208010_10667691	3300025097	Marine	GGGALGDPLVLVKKYFGDEIAKRIPLDTRTEVMETFVDNVRFTKDRAGFRTDDPRFNPDDLPEFAHGGLAKILEV
Ga0208013_10284791	3300025103	Marine	LGDPLILVKKYFGDTIAKRLPLNSDREVIDTFVENVRFTKDRAGFPTDDPRFNPDDLPEFKHGGLAQILEV
Ga0208793_10310171	3300025108	Marine	YFGDEIAKRLPLNSDRVVIEEFVDNVRFTKDKAGFATDDPRFNPDDLPEFKHGGLAKILE
Ga0208793_10342242	3300025108	Marine	TIAKRLPLDTRAEVIDTFVENVRFAKDRAGRLTDDPRFNPDDLPEFKHGGLAKILEV
Ga0208553_10612432	3300025109	Marine	LVKKYFGDEIAKRIPLDTRTEVMETFVDNVRFTKDRAGFRTDDPRFNPDDLPEFAHGGLAKILEV
Ga0208158_10857211	3300025110	Marine	KKYFGDTVAKRIPLNSDRVVIEEFVDNVRFTKDKAGFSTDDPRFNPDDLPEFKHGGLAKILEV
Ga0209349_10157413	3300025112	Marine	KKYFGDEIARRLPLNPEREVIETFVDNVRFTKDKAGFRTDDPRFNPDDLPEFKHGGLAKILEV
Ga0209349_10294951	3300025112	Marine	VLVKKYFGDEIAKRIPLDTRTEVMETFVDNVRFTKDRGGFATDDPRFNPDDLPEFAHGGLAKILEV
Ga0209349_10341151	3300025112	Marine	LGDPLILVKKYFGDTIAKRIPLNSDREVIETFVDNVRFTKDRTGFNTDDPRFNPDDLPEFKHGGLAKILEV
Ga0208433_11587872	3300025114	Marine	LVLVKKYFGDTIAKRIPLDTRTEVMETFVDNVRFTKDRAGFRTDDPRFNPDNLPDFADGGLAKILEV
Ga0208790_10249072	3300025118	Marine	LGDPLVLVKKYFGDEIAKRIPLDTRTEVMETFVDNVRFTKDRGGFATDDPRFNPDDLPEFAHGGLAKILEV
Ga0208790_10278802	3300025118	Marine	GDEIAKRIPVNADREVIDTFVENVRFTKDKSGFRNDDPRFNPDDLPEFKHGGLAQILEV
Ga0208790_10745631	3300025118	Marine	DTIVKRLPLNSDKEVIETFVENVRFTKDKGGFATDDPRFNPDDLPEFKHGGLAQILEV
Ga0208790_11072771	3300025118	Marine	GGGGALGDPLVLVKKYFGDTIAKRIPLNSDREVIETFVDNVRFTKDKGGFATDDPRFNPDDLPEFKHGGLAKILEV
Ga0209128_10330562	3300025131	Marine	SPTDYKYIMEGGGGALGDPLIIVKKYFGDTIAKRIPLNSDREVIETFVDNVRFTKDKAGFPTDDPRFNPDDLPEFKHGGLAKILEV
Ga0209128_10416942	3300025131	Marine	GGGALGDPLVLVKKYFGDEIAKRIPLDTRTEVIETFVDNVRFAKDRAGFATDDPRFNPDDLPEFAHGGLAKILEV
Ga0209232_10336831	3300025132	Marine	TDYKFIMEGGGGALGDPLILVKKYFGDTIVKRLPLNSDREVIETFVDNVRFTKDKAGFNTDDPRFNPDDLPEFKHGGLAQILEV
Ga0209232_12545951	3300025132	Marine	GGGALGDPLVLVKKYFGDEIARRLPLDTRTEVIDTFVDNVRFTKDKAGFQTDDPRFNPDELPEFKNGGLAKILEV
Ga0208299_10233303	3300025133	Marine	KKYFGDEIAKRIPVNADREVIDTFVENVRFTKDKSGFRNDDPRFNPDDLPEFKHGGLAQILEV
Ga0208299_10285952	3300025133	Marine	GDPLILVKKYFGDTIAKRIPLNSDREVIDTFVENVRFTKDRGGFATDDPRFNPDDLPEFKHGGLAQILEV
Ga0208299_11605302	3300025133	Marine	PTDYKYVMEGGGGALGDPLILVKKYFGDTVAKRIPLNSDRVVIEEFVDNVRFTKDKAGFSTDDPRFNPDDLPEFKHGGLAKILEV
Ga0209756_10410111	3300025141	Marine	ALGDPLVLVKKYFGDEIAKRIPLDTRTEVMETFVDNVRFTKDRAGFRTDDPRFNPDDLPEFAHGGLAKILEV
Ga0209756_10630652	3300025141	Marine	IAKRIPLNSDRVVIEEFVDNVRFTKDRAGFATDDPRFNPDDLPEFKHGGLAKILEV
Ga0209756_10667411	3300025141	Marine	GDPLVLVKKYFGDEIAKRIPLDTRTEVIETFVDNVRFTKDRAGFATDDPRFNPDDLPEFAHGGLAKILEV
Ga0209756_10898002	3300025141	Marine	KYFGDTIAKRLPLNSDKEVIETFVENVRFTKDKAGFPTDDPRFNPDDLPEFKHGGLAKILEV
Ga0209756_11209391	3300025141	Marine	ILVKKYFGDTIAKRIPLNSDRVVIEEFVDNVRFTKDKAGFPTDDPRFNPDDLPEFKHGGLAKILEV
Ga0209756_11284921	3300025141	Marine	LILVKKYFGDTIAKRIPLNSDRVVIEEFVDNVRFTKDKGGFSTDDPRFNPDDLPEFKHGGLAQILEV
Ga0209756_11937132	3300025141	Marine	LGDPLILVKKYFGDTIVKRLPLNSDKEVIETFVENVRFTKDKAGFPNDDPRFNPDDLPEFKHGGLAKILEV
Ga0209756_12293811	3300025141	Marine	YVMEGGGGALGDPLILVKKYFGDTIAKRIPLNSDRVIIEEFVDNVRFTKDKAGFATDDPRFNPDDIPEFKHGGLAKILEV
Ga0209756_12409782	3300025141	Marine	GDTIVKRLPLNSDREVIETFVDNVRFTKDRAGFATDDPRFNPDDLPEFKHGGLAKILEV
Ga0209645_10605111	3300025151	Marine	FIMEGGGGALGDPLILVKKYFGDTIAKRIPLNSDREVIETFVDNVRFTKDKAGFNTDDPRFNPDDLPEFKHGGLAQILEV
Ga0208182_11010931	3300025251	Deep Ocean	GGALGDPLVLVKKYFGDEIARRVPLDSRVEIIDAFVDNVRFTKDRAGFRTDDPRFNPDDIPEFKHGGLAKILEV
Ga0208934_10838742	3300025293	Deep Ocean	YFGDEIARRVPLDSRVEIIDAFVDNVRFTKDRAGFRTDDPRFNPDDIPEFKHGGLAKILE
Ga0310344_101410542	3300032006	Seawater	LGDPLVLIKKYFGDTITQRLPLNSDRVVIEEFVDNVRFAKDRSGFATDDPRFNPDDLPEFKHGGLAKILEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103057

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences