NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F102989

Metagenome / Metatranscriptome Family F102989

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102989
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 80 residues
Representative Sequence GRDFGPDAAPRRRRTPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA
Number of Associated Samples 88
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.00 %
% of genes near scaffold ends (potentially truncated) 97.03 %
% of genes from short scaffolds (< 2000 bps) 96.04 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (66.337 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil
(21.782 % of family members)
Environment Ontology (ENVO) Unclassified
(35.644 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.594 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.16
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF13546DDE_5 0.99
PF06794UPF0270 0.99
PF13751DDE_Tnp_1_6 0.99
PF13700DUF4158 0.99
PF03358FMN_red 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG3089Uncharacterized conserved protein YheU, UPF0270 familyFunction unknown [S] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.34 %
All OrganismsrootAll Organisms33.66 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004016|Ga0058689_10113674Not Available587Open in IMG/M
3300005179|Ga0066684_10672939All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300005184|Ga0066671_10981342Not Available532Open in IMG/M
3300005186|Ga0066676_10103239Not Available1734Open in IMG/M
3300005187|Ga0066675_10802949All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300005332|Ga0066388_105417067All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005332|Ga0066388_108145088All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005445|Ga0070708_101353476Not Available664Open in IMG/M
3300005447|Ga0066689_10819666Not Available578Open in IMG/M
3300005536|Ga0070697_100462333All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300005554|Ga0066661_10121800Not Available1578Open in IMG/M
3300005557|Ga0066704_10711035All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005557|Ga0066704_10837194Not Available571Open in IMG/M
3300005560|Ga0066670_10323187Not Available940Open in IMG/M
3300005568|Ga0066703_10720965All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005713|Ga0066905_100186051All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1537Open in IMG/M
3300005719|Ga0068861_100596699All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300005719|Ga0068861_100648808All Organisms → cellular organisms → Bacteria975Open in IMG/M
3300005844|Ga0068862_102020827Not Available587Open in IMG/M
3300006049|Ga0075417_10200908All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300006791|Ga0066653_10289389Not Available828Open in IMG/M
3300006845|Ga0075421_102580553Not Available528Open in IMG/M
3300006846|Ga0075430_101071416Not Available664Open in IMG/M
3300006880|Ga0075429_100806419All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300007076|Ga0075435_101257905Not Available648Open in IMG/M
3300007258|Ga0099793_10028007All Organisms → cellular organisms → Bacteria2370Open in IMG/M
3300009012|Ga0066710_102748508Not Available699Open in IMG/M
3300009090|Ga0099827_11818625Not Available531Open in IMG/M
3300009090|Ga0099827_11909993Not Available517Open in IMG/M
3300009100|Ga0075418_10535825Not Available1258Open in IMG/M
3300009143|Ga0099792_10116060All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1430Open in IMG/M
3300009836|Ga0105068_1093753Not Available580Open in IMG/M
3300010094|Ga0127480_1123566Not Available583Open in IMG/M
3300010119|Ga0127452_1068017Not Available515Open in IMG/M
3300010142|Ga0127483_1062231Not Available518Open in IMG/M
3300010333|Ga0134080_10267443Not Available759Open in IMG/M
3300010336|Ga0134071_10643931Not Available557Open in IMG/M
3300010359|Ga0126376_10925358All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor865Open in IMG/M
3300011270|Ga0137391_10110558All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor2382Open in IMG/M
3300012206|Ga0137380_10210379Not Available1761Open in IMG/M
3300012349|Ga0137387_11319318Not Available504Open in IMG/M
3300012357|Ga0137384_11570293Not Available508Open in IMG/M
3300012362|Ga0137361_10288904All Organisms → cellular organisms → Bacteria1499Open in IMG/M
3300012372|Ga0134037_1004468Not Available1717Open in IMG/M
3300012372|Ga0134037_1052185All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1301Open in IMG/M
3300012372|Ga0134037_1157846All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1375Open in IMG/M
3300012374|Ga0134039_1011652All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor880Open in IMG/M
3300012382|Ga0134038_1264777All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor987Open in IMG/M
3300012383|Ga0134033_1036687All Organisms → cellular organisms → Bacteria1939Open in IMG/M
3300012383|Ga0134033_1080410Not Available675Open in IMG/M
3300012387|Ga0134030_1120675Not Available965Open in IMG/M
3300012395|Ga0134044_1292723Not Available734Open in IMG/M
3300012396|Ga0134057_1233029Not Available781Open in IMG/M
3300012406|Ga0134053_1151326Not Available886Open in IMG/M
3300012407|Ga0134050_1293317Not Available769Open in IMG/M
3300012410|Ga0134060_1113868Not Available650Open in IMG/M
3300012410|Ga0134060_1454801Not Available536Open in IMG/M
3300012929|Ga0137404_11188063Not Available701Open in IMG/M
3300012976|Ga0134076_10464350Not Available573Open in IMG/M
3300014150|Ga0134081_10267770Not Available603Open in IMG/M
3300014154|Ga0134075_10353172Not Available645Open in IMG/M
3300015372|Ga0132256_101255793Not Available854Open in IMG/M
3300018074|Ga0184640_10440741Not Available581Open in IMG/M
3300018075|Ga0184632_10443143Not Available539Open in IMG/M
3300018431|Ga0066655_10275770All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1086Open in IMG/M
3300019259|Ga0184646_1145054All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina1140Open in IMG/M
3300019259|Ga0184646_1366838Not Available748Open in IMG/M
3300021073|Ga0210378_10254913Not Available664Open in IMG/M
3300025796|Ga0210113_1079853Not Available651Open in IMG/M
3300026118|Ga0207675_101832362Not Available626Open in IMG/M
3300026310|Ga0209239_1241132Not Available626Open in IMG/M
3300027511|Ga0209843_1042725Not Available812Open in IMG/M
3300027880|Ga0209481_10207126Not Available981Open in IMG/M
3300027882|Ga0209590_10983124Not Available527Open in IMG/M
3300028380|Ga0268265_11818577Not Available616Open in IMG/M
3300028587|Ga0247828_10651111Not Available649Open in IMG/M
3300030554|Ga0247640_1006554All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1567Open in IMG/M
3300030628|Ga0247629_10010652All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor1491Open in IMG/M
3300030829|Ga0308203_1005030All Organisms → cellular organisms → Bacteria1347Open in IMG/M
3300030829|Ga0308203_1007309Not Available1195Open in IMG/M
3300030904|Ga0308198_1006432All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1306Open in IMG/M
3300030993|Ga0308190_1075654Not Available697Open in IMG/M
3300031081|Ga0308185_1011409Not Available947Open in IMG/M
3300031093|Ga0308197_10071676Not Available956Open in IMG/M
3300031095|Ga0308184_1053148Not Available529Open in IMG/M
3300031096|Ga0308193_1023638All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300031114|Ga0308187_10045044All Organisms → cellular organisms → Bacteria → Proteobacteria1189Open in IMG/M
3300031114|Ga0308187_10206599Not Available691Open in IMG/M
3300031125|Ga0308182_1004743Not Available929Open in IMG/M
3300031421|Ga0308194_10009830All Organisms → cellular organisms → Bacteria1803Open in IMG/M
3300031421|Ga0308194_10323333Not Available541Open in IMG/M
3300031720|Ga0307469_12250553Not Available531Open in IMG/M
3300031731|Ga0307405_10301978Not Available1215Open in IMG/M
3300031731|Ga0307405_11883941Not Available533Open in IMG/M
3300031901|Ga0307406_10448967Not Available1034Open in IMG/M
3300032126|Ga0307415_100227067Not Available1501Open in IMG/M
3300032211|Ga0310896_10658726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium589Open in IMG/M
3300033551|Ga0247830_10051308All Organisms → cellular organisms → Bacteria2708Open in IMG/M
3300034448|Ga0370540_05794All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium694Open in IMG/M
3300034643|Ga0370545_057048Not Available773Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil21.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.84%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.89%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.95%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.98%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.98%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.98%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.99%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.99%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.99%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004016Agave microbial communities from Guanajuato, Mexico - As.Ma.rzHost-AssociatedOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009836Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20EnvironmentalOpen in IMG/M
3300010094Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010119Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012372Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012374Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012382Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012383Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012387Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012406Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300025796Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027511Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300030554Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb5 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030628Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb6 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031081Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031095Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_158 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031096Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031125Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034448Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_115 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058689_1011367413300004016AgaveAGRDFGPDAAPRRRRPPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0066684_1067293923300005179SoilAPASAPRPAAPRSPVAADPSTDAGRDFGPDAAPRRRRPQAKRAAHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0066671_1098134213300005184SoilGRDFGPDAAPRRRRPPAKRAAHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0066676_1010323913300005186SoilDAAPRRRRPPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0066675_1080294933300005187SoilPPAAAAPSTDAGRDVGPDAAPRRRRPPALRAAHAERGPKRPIYKRTPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0066388_10541706723300005332Tropical Forest SoilSEARARDDHGAPRAPRPAAPPSGRGAATSAGDGRDFGPGATPRRRRAPAKRAAQAERGPKHPLYKRATGPVRFSTGDEDGDEEEERSAHGARRRADAGEPDTA*
Ga0066388_10814508823300005332Tropical Forest SoilRAPRPPTAADPSTDAGRDFGPDAAPRRRRSPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDTAEHDTV*
Ga0070708_10135347613300005445Corn, Switchgrass And Miscanthus RhizosphereRDFGPDAAPRRRRPPAKRAAHAERGPKRPMYKRAAGPVRFSAEDDDGDEEVRGAHGAWRRADAGEHDTA*
Ga0066689_1081966623300005447SoilAAAAPSTDAGRDVGPDAAPRRRRPPALRAAHAERGPKRPIYKRTPGPVRFSAGDDDSDEEEVHDAHGARQRADADEHDTA*
Ga0070697_10046233313300005536Corn, Switchgrass And Miscanthus RhizosphereRPLAVSEARARDDHATPSAPRPAAPRPLSSAATSAGDGRDFGPDAAPRRRRPPAKRAAQAERGPKRPMYKRAARPVRFSAEDDDGDEEVRGAHGAWRRADAGEHDTA*
Ga0066661_1012180053300005554SoilEARARDAPAPPRAPRPPVAVDPSTDTGRDFGPDAAPRRRRTPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRADADEHDTT*
Ga0066704_1071103533300005557SoilAPRPPGAAATSAGDGRDFGPDAAPRRRRAPAKRAAQAERGPKRPMYKRAAGPVRFSAEDDDGDEEEVPGAHGARRRADAGEHDTA*
Ga0066704_1083719413300005557SoilAPRRRRPPVKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVHGAYGARHRADADAHDPA*
Ga0066670_1032318713300005560SoilAAADTSTDTGRDFGPDAAPRRRRPPAKRAAKAERGPKRPIYKRVPGPVRFSATDDDGDEEEVRGAHGASQHADADEHDTA*
Ga0066703_1072096533300005568SoilPSTDAGRDFGPDAAPRRRPPAKPAAHAERGPQRPIYKRAPGSVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0066905_10018605143300005713Tropical Forest SoilAPRPPTAADPSTDAGRDFGPDAAPRRRRPSAKRAAPAERGPKRPMYKRVPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0068861_10059669933300005719Switchgrass RhizosphereKGRPLAVNEARPRDAHAPARAPRPPTAADPSTDAGRDFGPDAAPRRRRPPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0068861_10064880813300005719Switchgrass RhizosphereAPRPAAPRPAAPRPDAGRDFGPDAAPRRRRTPGKRAAHAERGPKRPMYKRAPGPGRFSAGDEDEEERPGAYGGRHRTDAAEPDTV*
Ga0068862_10202082713300005844Switchgrass RhizosphereDPSTDAGRDFGPDAAPRRRRPPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0075417_1020090833300006049Populus RhizosphereADPSTDAGRDFGPDAAPRRRRPPAKRAAPAERGPKRPMYKRTPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0066653_1028938933300006791SoilFGPDAAPRRRRPPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0075421_10258055313300006845Populus RhizosphereGDDRAFGPGAAPRRRRAPTKSAAKGERRPKRPIYKRTAGPVRFSAADDDGDEEGRGAHEARRRADAGEHDPA*
Ga0075430_10107141633300006846Populus RhizosphereRALRPSAPRPPSSEVPSAADGRAFGPNAAPRRRRAPAKSAVKGERRPKHPIYKRAAGPVRFSAADDDGDEEVHGTHEA*
Ga0075429_10080641913300006880Populus RhizospherePPRAARPAAPRPLGAADTGPAAGRDFGPDAAPRRRRALGKRAAHAERGPKRPMYKRTRGPVPFRAGDEEGDDEEGHGA*
Ga0075435_10125790533300007076Populus RhizosphereAAPRRRRTLAKRAAHVERGPKRPIYKRAPGPVHFSAGDEDGDEEEVRGAHGARQPADADEHDTA*
Ga0099793_1002800713300007258Vadose Zone SoilRDFGPDAAPLRRRPPAKRAAHAERGPKRPIYKRAPGPGRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0066710_10274850813300009012Grasslands SoilAADPSTDAGRDFGPDAAPRRRRPQAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA
Ga0099827_1181862513300009090Vadose Zone SoilAPPSAPRLPVAADPSTDAGRDFGPDAAPRRRRPPAKRAAHAERGPKRPIYKRAPGPMRFSTGDEDGDEEEGRSAHGARPRADADEHDTA*
Ga0099827_1190999323300009090Vadose Zone SoilATSAGDGRDFGPDAAPRRRRAPAKRAAQAERGPKRPMYKRAAGPVRFSAEDDDGDEEEVPGAHGARRRADAGEHDTA*
Ga0075418_1053582513300009100Populus RhizosphereQAFKGRPLAVNEARARDAQAPPRAPRPPVVADPSTDTGWDVGPEAAPRRRRTPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEEVRGAHGARQRADAHDTA*
Ga0099792_1011606013300009143Vadose Zone SoilSPEAGRDFGPDAAPRRRRPPAKRAAHAERGPKRPIYKRAPGPGRFSAGDEDGDEEEVRGADGARHRADADAHDPA*
Ga0105068_109375313300009836Groundwater SandAPRPVAPRPSFAADTSAGDGRDLGPNTVPRRRRTLAKGAPKAEHRPKRPMYKRAAGPVRFSAGDEDGNEEVRGAHGTRRRADAGEHDTA*
Ga0127480_112356613300010094Grasslands SoilADTSTDTGRDFGPDAAPRRRRPPAKRAAKAERGPKRPIYKRVPGPVRFSATDDDGDEEEVRGAHGASQHADADEHDTA*
Ga0127452_106801723300010119Grasslands SoilRPQCSAAAPAKGIPKAGHRPKHPLYKRAAGPVRFSTEDDDGNEEEGRGAHGARRRADAGEHDTT*
Ga0127483_106223123300010142Grasslands SoilGRDFGPDAAPRRRRTPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0134080_1026744323300010333Grasslands SoilMPAPRPPSAADPSPEAGRDFGPNAAPRRRRPPVKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0134071_1064393113300010336Grasslands SoilSPEAGRDFGPDAAPRRRRPPVKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0126376_1092535833300010359Tropical Forest SoilVPASAPRPPTAADPSTDAGRDFGPDAAPRRRRPPAKRAAPAERGLKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0137391_1011055813300011270Vadose Zone SoilDAAPRRRRPLAKRAAKAARGPKRPLYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0137380_1021037943300012206Vadose Zone SoilAAPRRRRPLAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVHGAYGARHRADADAPDPA*
Ga0137387_1131931823300012349Vadose Zone SoilRPPSAADTRPDAGRDFGPDTAPRRRRPPAKRATQAERGPKHPIYKRAPGPVRFSAGDEDSDEEEVRGARGARQRADADEHDTA*
Ga0137384_1157029323300012357Vadose Zone SoilGRDFGPDAAPRRRRPQAKRAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0137361_1028890413300012362Vadose Zone SoilNAQAFKGRALVVNEARARDAPAPSSAPRPTAPRPPVAADTRPDAGWDFGPAAAPRRRRAPAKHAAHAERGPKHPIYKRAPGPVRFSAGDDDGDEEEGHGAHGARRRADTGEHDPA*
Ga0134037_100446843300012372Grasslands SoilDAAPRRRRPQAKRAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0134037_105218513300012372Grasslands SoilPSPEAGRDFGPDAAPRRRRPPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVHGAYGARHCADADAPDPASRTGRSARAA*
Ga0134037_115784653300012372Grasslands SoilDAAPRRRRPPAKRAAKAERGPKRPIYKRVPGPVRFSATDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0134039_101165233300012374Grasslands SoilSTDAGRDFGPDAAPRRRRPPAKRAAPAERGPKRPIYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0134038_126477713300012382Grasslands SoilRDFGPEAAPRRRRPPAKRAAHAERGPKHPIYKRAPGPVRFSAGDEDGDEEEVHGAYGARHRADADAHDPA*
Ga0134033_103668713300012383Grasslands SoilAPRRRRPPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0134033_108041013300012383Grasslands SoilPRRRRPPAKRAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT
Ga0134030_112067513300012387Grasslands SoilAPASAPRLPTAADPSTDAGRDFGPDAAPRRRRPQAKRAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0134044_129272333300012395Grasslands SoilADPSTDAGRDFGPDAAPRRRRPQAKRAAHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0134057_123302933300012396Grasslands SoilDTSTDTGRDFGPDAAPRRRRPPAKRAAKAERGPKRPIYKRVPGPVRFSATDDDGDEEEVRGAHGASQHADADEHDTA*
Ga0134053_115132613300012406Grasslands SoilAAPRRRRAPAKHAAPAERGPKHPIYKRAPGPVRFSAGDEDGDEEEGRSAHGARQRADADEYDTA*
Ga0134050_129331723300012407Grasslands SoilADPSPEAGRDFGPNAAPRRRRPPVKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAPDPA*
Ga0134060_111386833300012410Grasslands SoilRRRPPAKRAAKAERGPKRPIYKRVPGPVRFSATDDDGDEEEVRGAHGASQHADADEHDTA
Ga0134060_145480113300012410Grasslands SoilLIMLGDSLAAPPRPAPPRSQVAADMSTDAGRDFGPDAAPRRRRPQAKRAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0137404_1118806313300012929Vadose Zone SoilGDGRDFGPDAAPRRRRTPAKRAAQAERGPKHPMYKRAAGPVRFSAGDEDGDEEEVRGAHGARRRADAGEHDTA*
Ga0134076_1046435023300012976Grasslands SoilAVNEARARDAPAPPSAPRLPVAADPSNNAGRDFGPDAAPRRRRPPAKRAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0134081_1026777023300014150Grasslands SoilPSVAADTRPDTGRDFGPEAAPRRRRPPAKRAAHAERGPKHPIYKRAPGPVRFSAGDEDGDEEEGRGAHGARRRADADAHDTA*
Ga0134075_1035317213300014154Grasslands SoilNEARPRDAHAPASAPRPAAPRSPVAADPSTDAGRDFGPDAAPRRRRPQAKRAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0132256_10125579313300015372Arabidopsis RhizospherePRRRRPPVKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0184640_1044074113300018074Groundwater SedimentTSPEAGRHFGPDAAPRRRRRPSKGAAQTERGPKRPMYKRAAGPVRFSVEDDDSDEEEGRGEHIASRRADASEHDTE
Ga0184632_1044314323300018075Groundwater SedimentPAAPRPPVAVDTSTDAGRDFGPDAAPGRRRPPVKRAAKAERGPKRPMYKRAPGPVRFSAVDDDGDEEEERGAHGARQRADADEHDTA
Ga0066655_1027577033300018431Grasslands SoilDPSPEAGRDFGPNAAPRRRRPPVKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVHGAYGARHRADADAHDPA
Ga0190270_1223614113300018469SoilGSRNFGPDAAPRRRRKPPKGAVKAERGPKRPMYKRDAGPVRFSTEDDDDDAEEGRSTHSASRRTNASDHNTA
Ga0184646_114505413300019259Groundwater SedimentGRDFGPDAAPRRRRMPAKGAAKTERGLKPPLYKRATGPVRFSAADDDGDEDEVRSDHGARRRADAGDHDTA
Ga0184646_136683813300019259Groundwater SedimentAAPRRRRTLAKGAPQAEHRPKRPLYKRAAGPVRFSTEDDDGNEEEGRGARGARQRADADEHDTA
Ga0210378_1025491323300021073Groundwater SedimentTGRDFGPDAAPRRRRPPAKRAAHAERGPKHPIYKRAPGPVRFSAGDEDGDEEEGRGAHGARRRADADAHDTA
Ga0210113_107985323300025796Natural And Restored WetlandsRDVGPETLSRRRRPPTKRAAYPERGPKRPIYKRAAGPVRFRAADDDGDEDEERGAYGTRHRPETPEPDPA
Ga0207675_10183236213300026118Switchgrass RhizosphereKGRPLAVNEARPRDAHAPARAPRPPTAADPSTDAGRDFGPDAAPRRRRPPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0209239_124113223300026310Grasslands SoilAVNEARPRDAPAPASAPRPPTAADPSTDAGRDFGPDAAPRRRRPQAKRAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT
Ga0209843_104272533300027511Groundwater SandPVAADTRPDAGRDFGPDAAPRRRRLPAKRAAHAERGPKRPMYKRAAGPVRFSAVDDDGDEEEEHGAHGTQRRAAAGEHDTA
Ga0209481_1020712633300027880Populus RhizosphereSSAAISAGEDRDFGPDAAPRRRRPRAKRAVQAEPRLKHPIYKRAAGPVRFSTDDGDEEEEGRGAHRTPRGANPGERDTS
Ga0209590_1098312423300027882Vadose Zone SoilAPRPEGTAATSTGDSRDFGPDAAPRRRRAPAKRAAQAERGPKRPMYKRAAGPVRFSAEDDDGDEEEVPGAHGARRRADAGEHDTA
Ga0268265_1181857733300028380Switchgrass RhizospherePAAPRPEGGAATSAGDGRDFGPDATPRRRRAPAKRAAQAERGPKHPIYKRAAGPVRFSTGDEDDDEEERGAHGARRRADAGEHDTA
Ga0247828_1065111123300028587SoilRPSPALVAAPRPEGGAATSAGDGRDFGPDATPRRRRAPAKRAAQAERGPKHPIYKRAAGPVRFSTGDEDDDEEERGAHGARRRADAGEHDTA
Ga0247640_100655443300030554SoilTAPRRRRPPANRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHCTDAAEHDTV
Ga0247629_1001065243300030628SoilGPDAAPRRRRPPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0308203_100503013300030829SoilRDFGPDAAPRRRRAPAKSAAKAERGPKRPMYKRAAGPVRFSAGDDDGDEEEEHGAHGTRRRADAGEHDTA
Ga0308203_100730933300030829SoilRRRRPPAKRATHAERSPKRPIYKRALEPGRFSAGDGEGDEEEGRGDHGAPDRTDATEDDT
Ga0308198_100643213300030904SoilLNNQAFKGRALVVNEARARDAHAPPSAPRPAAPRPSVAADTSAGDGRDFGPNAAPRRRRTLAKGAPQAEHRPKRPLYKRAAGPVRFSTEDDDGNEEEGRGARGARQRADADEHDTA
Ga0308190_107565413300030993SoilPRRRRTLAKGAPQAEHRPKRPLYKRAAGPVRFSTEDDDGNEEEGRGARGARQRADADEHDTA
Ga0308185_101140933300031081SoilDAHAPPSAPRPAAPRPSVAADTSAGDGRDFGPNAAPRRRRTLAKGAPQAEHRPKRPLYKRAAGPVRFSTEDDDGNEEEGRGARGARQRADADEHDTA
Ga0308197_1007167613300031093SoilPDAAPRRRRPPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEGRGAHGARQRADADEHDTA
Ga0308184_105314813300031095SoilPRPAAPRPSVAADTSAGDGRDFGPNAAPRRRRTLAKGAPQAEHRPKRPLYKRAAGPVRFSTEDDDGNEEEGRGARGARQRADADEHDTA
Ga0308193_102363833300031096SoilVAADTSTEAGRDFGPDAPRRRRPPAKSAAKAERGPKRPMYKRAPGPVRFSAGDDDGDEEERGAHGARQRADADEHDTV
Ga0308187_1004504433300031114SoilHAPLNAPRPAVVADTSAGDSRDFGPNAAPRRRRTLAKGAPQAEHRPKRPLYKRAAGPVRFSTEDDDGNEEEGRGARGARQRADADEHDTA
Ga0308187_1020659913300031114SoilRRRRPPAKRASHAEHGPKRPIYKRALGPVRFSAGDGEEDEEEGRGGHGAPDRTDATEDDM
Ga0308182_100474313300031125SoilGRDFGPNAAPRRRRTLAKGAPQAEHRPKRPLYKRAAGPVRFSTEDDDGNEEEGRGARGARQRADADEHDTA
Ga0308194_1000983043300031421SoilGPDAPPRRRRPPAKRAAKAERGPKRPMYKRAPGPVRFSAGDDDGDEEEERGAHGARQRADADEHDTA
Ga0308194_1032333323300031421SoilDGRDFGPDAAPRRWRPPAKRAVHAERGPKRPIYKRAAGPVRFSAGDDDGDEEEEHGAHGTRRRADAGEHDTA
Ga0307469_1225055323300031720Hardwood Forest SoilPRAPRPAAPRPADAAATSAGDGRDFGPDAAPRRRRAPAKRAAQAERGPKRPMYKRAAGPVRFSAEDDDGDEEEVPGAHGARRRADADEHDTA
Ga0307405_1030197813300031731RhizosphereLAVNEARPRDAHAPPRAPRPPVAADPSTDTGWDFGPEAAPRRRRTPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEEVRGAHGARQRADADAHDTA
Ga0307405_1188394113300031731RhizosphereRPPTTADPRTDAGRDFGPDAAPRRRRPPAKRAAPAERGPKRPMYKRAPGPVRFGTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0307406_1044896733300031901RhizosphereNQAFKGRPLAVNEARARDAQAPPRAPRPPVVADPSTDTGWDFGPEAAPRRRRTPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEEVRGAHGARQRADADAHDTA
Ga0307415_10022706743300032126RhizosphereLNNQAFKGRPLAVNEARPRDAHAPPRAPRPPVAADPSTDTGWDFGPEAAPRRRRPPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEEVRGAHGARQRADADAHDTA
Ga0310896_1065872623300032211SoilGPAAGRDFGPDAAPRRRRALGKRAAHAERGPKRPMYKRTRGPVPFRTGDTEGDDEEGHGA
Ga0247830_1005130873300033551SoilAPASAPRPPTAADPSTDAGRDFGPDAAPLRRRPPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0370540_05794_270_5843300034448SoilMSEARARDEHTPLSAPRPAAPRPPSSAATSAGDGRDFGPDAAPRRWRPPAKRAVHAERGPKRPIYKRAAGPVRFSAGDDDGDAEEGHGAHGARRRADAGAHDTA
Ga0370545_057048_3_2513300034643SoilRPGIAAAPSADDGRDFGPDAAPRRRRTPAKTAAKTERGPKLPLYKRATGPVRFSTVDDDEEDEVRGGHGARRRADAGDHDTT

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.