Metagenome Family F102915

Basic Information
Family ID	F102915
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	91 residues
Representative Sequence	DAACSREVSRLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG
Number of Associated Samples	77
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	3.96 %
% of genes from short scaffolds (< 2000 bps)	3.96 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (96.040 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (35.644 % of family members)
Environment Ontology (ENVO)	Unclassified (69.307 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.287 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.05% β-sheet: 21.05% Coil/Unstructured: 57.89%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00296	Bac_luciferase	30.69
PF02798	GST_N	8.91
PF00188	CAP	4.95
PF01568	Molydop_binding	3.96
PF08241	Methyltransf_11	2.97
PF00795	CN_hydrolase	1.98
PF13417	GST_N_3	0.99
PF13577	SnoaL_4	0.99
PF00990	GGDEF	0.99
PF00440	TetR_N	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	30.69
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	4.95

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
All Organisms	root	All Organisms	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
cellular organisms	root	All Organisms → cellular organisms	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.04 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.96 %

Scaffold	Taxonomy	Length	IMG/M Link
3300010333\|Ga0134080_10321467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300012349\|Ga0137387_10840426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300017654\|Ga0134069_1176785	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300026532\|Ga0209160_1348236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.06%
Host-Associated	Host-Associated	5.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.07%
Plants	Host-Associated → Plants	5.94%
Aquatic	Environmental → Aquatic	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.94%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.14%
Loam	Environmental → Terrestrial → Soil → Loam	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	44.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	35.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	24.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066683_107933582	3300005172	Soil	DAACSREVSRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVAHPCGGTFVLFEVGG*
Ga0066680_1000660111	3300005174	Soil	ALVPPTADPDDALALARRSGARLWLTRPAWIRPPWTPPADVRAVARPCGGTFVLFEVGG*
Ga0066680_100441301	3300005174	Soil	LLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS*
Ga0066673_107914902	3300005175	Soil	AALGVALVVQALWVSHPFDAACSREVSRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVAHPCGGTFVLFEVGG*
Ga0066685_100589471	3300005180	Soil	LWVSHPFDAACSREVSRLVLEHYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRRGARLWLTRPAWIRPPWAPPADARAVARPCGGTFVLFELGG*
Ga0066685_100835184	3300005180	Soil	EVSRLVLERYGPGQALVALDGRFAYGARGRALVPPTADPEDALALARRSGARLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG*
Ga0066676_105379061	3300005186	Soil	AGLVVQALWISHPFDAACAREVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS*
Ga0066676_107216141	3300005186	Soil	RFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVAHPCGGTFVLFEVGG*
Ga0066675_102107941	3300005187	Soil	VLERYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWRPPADAYAVARPCGGTFVLFEVGG*
Ga0070694_1013989031	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LVAVDGRFAYGARGRALVPPSTNPEDALALARRKGARLWLTRPRWIRPPWQAPADVRPVARPCGGTFVLFEVGG*
Ga0066686_107622781	3300005446	Soil	EVSRLVLERYGPGQALVALDGRFAYGARGRALVPPTADPEDALALARRSGARLWLTRPAWIRPPWTPPADVRAVARPCGGTFVLFEVGG*
Ga0066686_107752692	3300005446	Soil	PGQALVAVDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0066689_102783151	3300005447	Soil	AACSREVSRLVLERYGPGQALVALDGRFAYGARGRALVPPTADPEDALALARRSGARLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG*
Ga0066689_105292411	3300005447	Soil	RFAYGARGRALVPPTTDPEDALALARRRGARLWLTRPAWIRPPWAPPADARAVARPCGGTFVLFELGG*
Ga0066682_100277361	3300005450	Soil	ARPVAAALAAGLVVQALWISHPFDAACAREVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS*
Ga0066682_101546461	3300005450	Soil	ALVAVDGRFAYGAHGRALVPPTTDPEAALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG*
Ga0070699_1005913061	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSHPFDAACSREVSRVVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPADALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0070697_1020072821	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RYGPGAAVVAVDGRFAWAARGRPVVPQTTDPAAALALARRRGARLWLTRPSWTKPPWQPPPDVRPIARPCGGSFVLYEIG*
Ga0070704_1007247291	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RGRALVPRSTDPGEALALARRSGARLWLTRPAWIRPPWQAPPDARVVARPCDGTFVLFELAEPPR*
Ga0066695_100525064	3300005553	Soil	RRARPVAAALAAGLVVQALWISHPFDAACAREVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS*
Ga0066692_107496811	3300005555	Soil	ALVVQALWVSHPLDAACSREVSQLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEAALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG*
Ga0066704_102953501	3300005557	Soil	RARPVAAALAAGLVVQALWISHPFDAACAREVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS
Ga0066704_107366251	3300005557	Soil	REVSALLLRRYGPGQALVAVDGRFAYGARGKAIVPRTTNPAEALALARRHGARLWLTRPAWIAPPWTAPPDVRPVARPCGGAFVLFDLDGS*
Ga0066698_110349112	3300005558	Soil	ALVVQALWVSHPFDAACSREVTRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG*
Ga0066700_111771642	3300005559	Soil	DGRFAYGARGRALVPPTADPDDALALARRSGARLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFELGG*
Ga0066693_102295032	3300005566	Soil	ALVVQALWVSHPLDAACSREVSQLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWRPPADAYAVARPCGGTFVLFEVGG*
Ga0066705_100206084	3300005569	Soil	FDAACAREVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS*
Ga0066694_100889261	3300005574	Soil	QALVAVDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG*
Ga0066708_108278111	3300005576	Soil	VVQALWVSHPLDAACSREVSRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG*
Ga0066656_105596692	3300006034	Soil	EVSRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVAHPCGGTFVLFEVGG*
Ga0066665_108763151	3300006796	Soil	GRFAYGAGWEAVVPDTTDPDDALALARRTGTRLWMTRPSWIRSWHVPTQAKPAARPCGGTFVLFELEDQ*
Ga0075434_1012391361	3300006871	Populus Rhizosphere	RGRALVPRTTAPDEALALAREKGARLWLTRPAWLGRAWTPPPDVRPVARPCGGTFVLFEVSEGAR*
Ga0075424_1009951131	3300006904	Populus Rhizosphere	YGARGRALVPGSTDPDEALALARRSGARLWLTRPAWIRPPWHAPPDARIVARPCDGTFVLFEVGAP*
Ga0075424_1026694611	3300006904	Populus Rhizosphere	AVWISHPFDAACSREVSRLLLERYGPGQALVAVDGRFAYGARGRALVPRTGDPAEALALARRDGARLWLTRAAWIRPPWTPPAGARAVARPCAGTFVLFELDG*
Ga0066710_1000404591	3300009012	Grasslands Soil	CTREVSALLLRRYGPGQALVAVDGRFAYGARGKAIVPRSTDPAEALALARRYGARLWLTRPAWIAPPWTAPADVHPVARPCGGAFVLFDLDGS
Ga0066710_1002995084	3300009012	Grasslands Soil	EVSQLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEAALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG
Ga0066710_1019291021	3300009012	Grasslands Soil	GRFAYGAGWAAVVPDTTDPDAALALARRTGARLWMTRLRWIRGWHVPTQAKTAARPCGGTFVLFELEDR
Ga0099829_107113092	3300009038	Vadose Zone Soil	VVQALWVSHPFDAACSREVSRVVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPADALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0066709_1017099831	3300009137	Grasslands Soil	PFDAACSREVTRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGKFVLFEVGG*
Ga0066709_1035665151	3300009137	Grasslands Soil	AVDGRFAYGARGRALVPPTTDPEDALALARRRGARLWLTRPAWIRPPWAPPADARAVARPCGGTFVLFELGG*
Ga0075423_103243033	3300009162	Populus Rhizosphere	SRYGTGQALVAVDGRFAYRARGRALVPRTTAPDEALALAREKGARLWLTRPAWLGRAWTPPPDVRPVARPCGGTFVLFEVSEGAR*
Ga0075423_123963732	3300009162	Populus Rhizosphere	MSPALMRALPFSTDAACSRSVSRLVLDRYGPGQALVAVDGRIAYGARGRALVPGSTDPDEALALARRSGARLWLTRPAWIRPPWHAPPDARIVARPCDGTFVLFEVGAP*
Ga0075423_126107762	3300009162	Populus Rhizosphere	YGPGQALVAVDGRVAYGARGRALVPASTDPAEALALARRSGARLWLTRPAWIRPPWQAPPDARVVAKPCNGTFVLFEIGGP*
Ga0134070_101744612	3300010301	Grasslands Soil	AALGSALVVQALWVSHPLDAACSREVSRLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0134088_102308113	3300010304	Grasslands Soil	DGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0134088_106411351	3300010304	Grasslands Soil	QALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVAHPCGGTFVLFEVGG*
Ga0134084_100798751	3300010322	Grasslands Soil	WVSHPLDAACSREVSRLVLERYGPGQALVAIDGRFAYGAHGRALVPPTTDPEDALALARGSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0134084_103710991	3300010322	Grasslands Soil	GRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG*
Ga0134086_101796311	3300010323	Grasslands Soil	PLDAACSREVSRLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0134064_104285822	3300010325	Grasslands Soil	LVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0134080_100691102	3300010333	Grasslands Soil	LAVQALWLSHPFDAACSREVSRLVLEHYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRRGARLWLTRPAWIRPPWAPPADARAVARPCGGTFVLFELGG*
Ga0134080_103214672	3300010333	Grasslands Soil	GRHARVATAALGVALVVQALWVSHPFDAACSREVSRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADAYAVARPCGGTFVLFEVGG*
Ga0134063_100494644	3300010335	Grasslands Soil	CAREVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS*
Ga0134071_101700401	3300010336	Grasslands Soil	DAACSREVSRLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0134066_100363373	3300010364	Grasslands Soil	VALVVQALWVSHPFDAACSREVSRLVLERYGPGQALVAIDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0136847_108422742	3300010391	Freshwater Sediment	RYGPGQALVAVDGRFAYVARGRAVVPKSTGPHAALALARTRHARLWLTRPRWLGKDFVPPAGVREVARPCDGAFVLFELTE*
Ga0137391_102178221	3300011270	Vadose Zone Soil	PFDAACSRDVSLLVLERYGPGQALVAVDGRCAYGAHGRALVPPTVDPDDALALARRSGARLWLTRPAWIRPPWTPPADAHAVARPCGGTFILFEVGG*
Ga0137383_104035723	3300012199	Vadose Zone Soil	VPPTADPDDALALARRSGARLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG*
Ga0137382_100831724	3300012200	Vadose Zone Soil	VSHPLDAACSREVSQLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEAALALARRSGARLWLTRPAWIRPPWTPPADAYAVARPCGGTFVLFEVGG*
Ga0137381_102109013	3300012207	Vadose Zone Soil	HARVATAALGVALVVQALWVSHPFDAACSREVSRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG*
Ga0137381_108836351	3300012207	Vadose Zone Soil	LDAACSREVSRLVLERYGPGQALVAIDGRFAYGAHGHALVPPTTDPEDALALARGSGARLWLTRPAWIRPPWTVPADARAVARPCGGTFVLFELGG*
Ga0137377_103897442	3300012211	Vadose Zone Soil	DAACSREVSRLVLERYGPNQALVAVDGRFAYGARGRALVPSTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADAYAVARPCGGTFVLFEVGG*
Ga0137387_101246341	3300012349	Vadose Zone Soil	GESLVAVDGRFAYRADGRPVVPRTTAPDDALALARRDSARLWLTRPSWLPPDWRPPPDVRPVARPCGGTFVLFELARS*
Ga0137387_108404261	3300012349	Vadose Zone Soil	LGRHARVATAALGVALVVQALWVSHPFDAACSREVSRLVLERYGPNQALVAVDGRFAYGAAGRALVPPTTDPKDALALARRSGAHLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG*
Ga0137386_103907943	3300012351	Vadose Zone Soil	RYGPNQALVAVDGRFAYGAAGRALVPPTTDPKDALALARRSGAHLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG*
Ga0137386_111856681	3300012351	Vadose Zone Soil	VRVATAALGVALVVQALWVSHPFDAACSREVSRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLIVVGG*
Ga0137384_113366271	3300012357	Vadose Zone Soil	PFDAACSREVSRLVLERYGPNQALVAVDGRFAYGAAGRALVPPTTDPKDALALARRSGAHLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG*
Ga0137404_104564583	3300012929	Vadose Zone Soil	GRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0137407_121385651	3300012930	Vadose Zone Soil	YGARGRALVPPTTDPKDALALARRSGARLWLTRPAWIRPPWTPPADVRAVARPCGGTFVLFEVGG*
Ga0134077_103798901	3300012972	Grasslands Soil	RVATAALGVALVVQALWVSHPLDAACSREVSRLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFELGG*
Ga0134110_100355321	3300012975	Grasslands Soil	PGQALVAVDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG*
Ga0134081_100587501	3300014150	Grasslands Soil	HPLDAACSREVSQLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEAALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG*
Ga0134081_101772842	3300014150	Grasslands Soil	REVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS*
Ga0134075_103751331	3300014154	Grasslands Soil	LEHYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRRGARLWLTRPAWIRPPWAPPADARAVARPCGGTFVLFELGG*
Ga0134073_102317212	3300015356	Grasslands Soil	DGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTHPAWIRPPWTPPADALVVARPCGGTFVLFELGG*
Ga0134089_103257412	3300015358	Grasslands Soil	SREVSRLVLEHYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRRGARLWLTRPAWIRPPWAPPADARAVARPCGGTFVLFELGG*
Ga0134069_11182942	3300017654	Grasslands Soil	FDAACSREVSRLVLEHYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRRGARLWLTRPAWIRPPWAPPADARAVARPCGGTFVLFELGG
Ga0134069_11767852	3300017654	Grasslands Soil	HARVAAAAFGVALVVQALWVSHPFDAACSREVSRLVLERYGPGQALVALDGRFAYGARGRALVPPTADPEDALALARRSGARLWLTRPAWIRPPWTPPADVRAVARPCGGTFVLFEVGG
Ga0134069_13796891	3300017654	Grasslands Soil	PGQALVAVDGRFAYGAHGRALVPPTTDPEAALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG
Ga0134112_103424661	3300017656	Grasslands Soil	QALVALDGRFAYGARGRALVPPTADPEDALALARRSGARLWLTRPAWIRPPWTPPADVRAVARPCGGTFVLFEVGG
Ga0134074_13697261	3300017657	Grasslands Soil	QALVAVDGRFAYGARGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADAYAVARPCGGTFVLFEVGG
Ga0134083_104766912	3300017659	Grasslands Soil	ALVPPTVDPDDALALARRSGARLWLTRPAWIRPPWTPPADAHAVARPCGGTFFLFEVGG
Ga0187780_112092421	3300017973	Tropical Peatland	AWRAHARPIVPRTTDPEDALALARRRGARLWLTRTQWIAPPWAPPPDLRAVARPCGGTFVLFEVGG
Ga0066669_109247042	3300018482	Grasslands Soil	VLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVAHPCGGTFVLFEVGG
Ga0066669_115581311	3300018482	Grasslands Soil	PGQALVAVDGRFAYGAHGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG
Ga0207646_114019392	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LVIALVVQALWVSHPFDAACAREVETLLLERYGPGEPLVAVDGRFAYRARGRPVVPRTTSPDEALSLARRERARLWLTRPSWLPSGWRPPPDANAVARPCGGTFVLFELARS
Ga0209237_11639942	3300026297	Grasslands Soil	LAMAALGVALVVQALWVSHPLDAACSREVSRLVLERYGPGQALVALDGRFAYGARGRALVPPTADPEDALALARRSGARLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG
Ga0209236_11729382	3300026298	Grasslands Soil	DAVCSREVSRLVLERYGPGQALVALDGRFAYGARGRALVPPTADPDDALALARRSGARLWLTRPAWIRPPWTPPADVRAVARPCGGTFVLFEVGG
Ga0209268_10733281	3300026314	Soil	PFDAACSREVSRLVLEHYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRRGARLWLTRPAWIRPPWAPPADARAVARPCGGTFVLFELGG
Ga0209152_102941451	3300026325	Soil	LDAACSREVSQLVLERYGPGQALVAVDGRFAYGAHGRALVPPTTDPEAALALARRSGARLWLTRPAWIRPPWTPPTDARAVARPCGGTFVLFEVGG
Ga0209266_11610442	3300026327	Soil	REVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS
Ga0209473_11800212	3300026330	Soil	HPFDAACSREVSQLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADAYAVARPCGGTFVLFEVGG
Ga0209267_10906201	3300026331	Soil	VSHPFDAACSREVSGLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPEDALALARRSGARLWLTRPAWIRPPWTPPADARAVARPCGGTFVLFEVGG
Ga0209377_11646272	3300026334	Soil	WVSHPFDAACSREVSALLLGRYGPGQALVAVDGRFAYGARGKAIVPRTTNPAEALALARRHGARLWLTRPAWIAPPWTAPPDVRPVARPCGGAFVLFDLDGS
Ga0209378_12576351	3300026528	Soil	DAACAREVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGAFVLFELARS
Ga0209160_13482361	3300026532	Soil	LGRRARPVAAALAAGLVVQALWISHPFDAACAREVQELLLERYGPGESLVAVDGRFAYRAHGRPVVPRTTAPDDALALARRESARLWLTRPSWLPPDWRPPPDARPVARPCGGTFVLFELARS
Ga0209157_13148222	3300026537	Soil	MPPEVSRLVLERYGPGQALVALDGRFAYGARGRALVPPTADPEDALALARRSGARLWLTRPAWIRPPWTPPADVRAVARPCGGTFVLFEVGG
Ga0209056_101346084	3300026538	Soil	ALGVALVVQALWVSHPFDAACSREVSRLVLERYGPGQALVAVDGRFAYGARGRALVPPTTDPDDALALARRSGARLWLTRPAWIRPPWTPPADARAVAHPCGGTFVLFEVGG
Ga0307469_105287071	3300031720	Hardwood Forest Soil	YGPGQALVAVDGRFAYGARGRALVPPTTDPDDAVALARRSGARLWVTRPAWIRPPWTPPADARAVARPCGGTFVLFELG
Ga0307469_114834151	3300031720	Hardwood Forest Soil	YGARGRALVPPTVDPDDALALARRSGAHLWLTRPAWIRPPWTPPADAHAVARPCGGTFVLFEVGG
Ga0307473_113003792	3300031820	Hardwood Forest Soil	PFDAACAREVQELLLARYGPGESLVAVDGRFAYRAQGRPVVPRTTAPDDALALARRERARLWLTRPSWLPHGWRAPPDARPVARPCGGTFVLFELARS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102915

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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