NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F102883

Metagenome / Metatranscriptome Family F102883

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102883
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 78 residues
Representative Sequence MLNRTFIPLALLSLAFAADAAAQSAVPDTTPTIGPAKPELFKRIIANQKKGEAALDLYERIERVETRKNPNDPTPSTVK
Number of Associated Samples 73
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 3.96 %
% of genes from short scaffolds (< 2000 bps) 1.98 %
Associated GOLD sequencing projects 65
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (95.050 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(54.455 % of family members)
Environment Ontology (ENVO) Unclassified
(51.485 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.455 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 45.79%    β-sheet: 0.00%    Coil/Unstructured: 54.21%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF12867DinB_2 31.68
PF12704MacB_PCD 17.82
PF08471Ribonuc_red_2_N 0.99
PF03162Y_phosphatase2 0.99
PF05163DinB 0.99
PF01546Peptidase_M20 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0209Ribonucleotide reductase alpha subunitNucleotide transport and metabolism [F] 0.99
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 0.99
COG2365Protein tyrosine/serine phosphatase Oca4Signal transduction mechanisms [T] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A95.05 %
All OrganismsrootAll Organisms4.95 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300010337|Ga0134062_10549006All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300020001|Ga0193731_1000018All Organisms → cellular organisms → Bacteria → Acidobacteria52166Open in IMG/M
3300026548|Ga0209161_10340572All Organisms → cellular organisms → Bacteria → Acidobacteria679Open in IMG/M
3300026551|Ga0209648_10037788All Organisms → cellular organisms → Bacteria4188Open in IMG/M
3300026551|Ga0209648_10049730All Organisms → cellular organisms → Bacteria → Acidobacteria3595Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil54.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.82%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.95%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.97%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1003789113300001661Forest SoilLAALSPLRLMLKRAFISVAVLCLALAAGAAAQSVVPDSTPAIGPAKPDFFNRVIANQKKAEAALDLYERIEHVETRK
JGI25381J37097_100608913300002557Grasslands SoilLAALSPLRLMLKGAFISVAVLSLALAADAAAQSVVPDSTLVIGPARPDFFNRVIANQKKGEAALDLYERIERVETRKNP
JGI25390J43892_1010851413300002911Grasslands SoilMLKRAFVSIALLSLAHAPGQSVAPESTPGVGPEKPEFFNRVIANQKKGEAALDLYERIERVETRKNPNDPAPLAIK
JGI25617J43924_1012353323300002914Grasslands SoilMMLKRAFVPITVLYLALAANAAAQSMVPXSATAIGLAKPELFSRIIANQKKGDAALDLYERIERVE
Ga0066672_1024231923300005167SoilMLKRAFVSIALLSLAHAPGQSVAPESTPGVGPEKPEFFNRVIANQKRGEAALDLYERIERVETRKNPSDPAPPTIKIMRVI
Ga0066672_1080095113300005167SoilMRKYAFVPMALLSLAFAGDAAAQSAVPDTTPTIGPAKPDLFKRIIANQKKGEAALDLYERIERVETRKNPNDPKPSTVKISRVIPSGTGM
Ga0066684_1053533013300005179SoilMALLSLAFAADAAAQSAVPDTTPTIGPVRPELFKRIIANQKKGEAALDLYERIERVETRKNP
Ga0066675_1133443413300005187SoilMLNRTFIPLALLSLAFAADAAAQSAVPDTTPTIGPVRPELFKRIIANQKKGEAALDLYERIERVETRKNP
Ga0066670_1021638723300005560SoilMRKYAFVPMALLSLAFAGDAAAQSAVPDTTPTIGPAKPDLFKRIIANQKKGEAALDLYERIERVETRKNPNDPKPSTVKISRVIPSGTGMVRISLG
Ga0066691_1034634023300005586SoilMHKYASVAMALLSLTFAADAAAQSAVPDTTPTMGPAKPELFKRILANQKKGEAALDLYERIERVETRKN
Ga0066651_1009688333300006031SoilMRKYAFVPMALLSLAFAGDAAAQSAVPDTTPTIGPAKPDLFKRIIANQKKGEAALDLYERIERVETRKNPNDP
Ga0066656_1005055933300006034SoilMLNRTFIPLALLSLAFAADAAAQSAVPDTTPTIGPAKPELFKRIIANQKKGEAALDLYERIERVETRKNPNDPTPSTVK
Ga0066652_10109883813300006046SoilMLKGAFISVAVLSLALAADAAAQSVVPDSTLVIGPARPDFFNRVIANQKKGEAALDLYERIERVETRKN
Ga0075017_10053878923300006059WatershedsMLHRAFIIVALLSPALTAGAAAQSVLPDSTPSIGPARPELFHRVIANQKKAEAALDLYERVERVEIRKSPSDPSPPTIKITRVIPSGT
Ga0075015_10007079313300006102WatershedsMHYRVFTILALLSLAFTAGAAAQSVVADGTAAIGPTKPDLFNRVLANQKKAEAALDLYERVERVETRKNPNDPSPPTIK
Ga0066659_1158496023300006797SoilMLNRTFIPLALLSLAFAADAAAQSAVPDTTPTIGPARPELFKRIIANQKKGEAALDLYERIERVETRKNPND
Ga0099793_1070182623300007258Vadose Zone SoilMLKRAFVPIAVLSSAFAAVAAAQSIAPDSTPTIAPAKPDLFLHVIANQKRGEAALDLYERIERVESRKTPSDPAPAAVKISRVIPSGTG
Ga0099794_1004898613300007265Vadose Zone SoilMMLKRAFVSLALLSLALAADAGAQSVKPDTRPTIGPAKPDFFNRVITNQKKGEAALDLYERIERVETRKHPNDAAPVAIKISRVIPS
Ga0099794_1017955423300007265Vadose Zone SoilMMLKRAFVPIALLSLALAADAGAQSVTPDTRPTIGPAKPDFFNRVIANQKKGEAALDLYERIERVETRKHPNDAAPVAIKISRVIPS
Ga0099794_1037778623300007265Vadose Zone SoilMMLKRVFFFVALLSLALAGGAAAQSVVPDSPPTIGPAKPELFNRIIANQKKAEASLDLYERTERVETRKSSSDPNPPVI
Ga0099829_1021216713300009038Vadose Zone SoilMLHRTFIPVAVLSLALAGDAAAQSVAPDTTPAIEPAKPDLFHRVIANQKKGEAALDLYERIERVETRKNYSDPAPPAIKISRVIPS
Ga0099829_1117792413300009038Vadose Zone SoilVADFAPIRIMLNRTFIPLALLSLALAADAAAQSVVPDSTPATGPAKPDFFNRVIANQKKGEAALDLYERIERVETRKNPSDPA
Ga0099830_1021771833300009088Vadose Zone SoilMLKRTFIPMALLSLALAADAAAQSVAPDTTPAIEPAKPDLFNRVIANQKKGEAALDLYERIERVETHKNPSDPTPAATKISRVIPSGT
Ga0099830_1169657123300009088Vadose Zone SoilMLYRAFIPLALLSLALAADAAGQSMVPDSAPAISPAKPELFNHIIANQKKGESALDLYER
Ga0099828_1116044813300009089Vadose Zone SoilMMLKRAFVPITVLSLALAANAAAQSVVPDSAPAIGSAKPELFSRIIANQKKGDAALDLYERIERVESRKNPSDPAPASVKI
Ga0099827_1112666813300009090Vadose Zone SoilMMLKRAFAPIAVLSLALAANTAGQSVVSNSTPTIGPANPDLFKRIIANQKKGEAALDLYERIERVET
Ga0099792_1127811113300009143Vadose Zone SoilMLNRTSIPLVLLSLAFAADAAAQSAVPDTTPTVGPTKPDLFKRIIANQKKGEAALDLYERIERVETRKNANDPAPSTVKTSRVIP
Ga0134062_1054900613300010337Grasslands SoilMLKRVFVSIALLSLAHAPGQSVAPESTPGVGPEKPEFFNRVIANQKRGEAALDLYERIERVETRKNPSDPAPTTIKIMRVIPSGTGMFRIALGPD
Ga0137392_1032012523300011269Vadose Zone SoilMLKRAFISVAVLSLAFAADSAAQSVVPDSTPAIGPVRPDFFNRVIANQKKAEAALDLYERIERVETRKNLNDPAPPAIKILRVVPSGTGMFRIPV
Ga0137391_1125591123300011270Vadose Zone SoilMMLKRAFVPITVLSLALAANAAAQSMVPDSAPAIGPPKPELFSRIIANQKKGDAALDLYERIERV
Ga0137393_1020844713300011271Vadose Zone SoilMMLKRAFVPIALLSLALAADAGAQSVTPDTRPTIGPAKPDFFNRVIANQKKGEAALDLYERIERVETRKHPNDAAP
Ga0137393_1157237523300011271Vadose Zone SoilMMLKRAFVSLALLSLALAADAGAQSVTPDTRPTIGPAKPDFFNRVIANQKKGEAALDLYERIERVETRKHPNDAAP
Ga0137389_1011775333300012096Vadose Zone SoilMMMKRVFVPITVLSLALAGDAAAQSMAPDSAPVIGPAKPDLFKHIIANQKKGEAALDLYERIERVESRKNSR
Ga0137388_1030119933300012189Vadose Zone SoilMMLKRVLVPITVLSLALAANAAAQSMVPDSAPAIGPPKPELFSRIIANQKKGDAALDLYERIERVESRNNPGDPAPASVKIARV
Ga0137388_1043144823300012189Vadose Zone SoilMLKRAFISVAVLSLAFAADSAAQSVVPDSTPAIGPVRPDFFNRVIANQKKAEAALDLYERIERVETRKNLNDPAPPAIK
Ga0137388_1043821323300012189Vadose Zone SoilMMLKRAFVSLALLSLALAADAGAQSVKPDTRPTIGPAKPDFFNRVIANQKKGEAALDLYEHIERVETRKHPNDAAPVAIKISRVIPSGT
Ga0137388_1127665413300012189Vadose Zone SoilMRKCVFIPMALLSLALAVYAAAQSAAPDTTPTIGPPKPDLFKRIIANQKKDEAAMDLYERVERVETRKNSSDPNPPV
Ga0137364_1051810713300012198Vadose Zone SoilMLKRALIFVAVLCLALAADSAAQSVVPDSTPAIGLARPDFFNRVIANQKKGEAALDLYERIERVETRKNPGDPAP
Ga0137364_1096207113300012198Vadose Zone SoilMLKRAFIFVAVLCLALAADSAAQSVVPDSTPAIGPARPDFFNRVIANQKKGEAALDLYERIERVETRKNPGDPAP
Ga0137363_1056399913300012202Vadose Zone SoilMMLKRVFFSVALLSLALAGGAAAQSVVPDSPPTIGPAKPELFNHIIANQKKAEASLDLYERTERVETRKNSSDPNPPVIKVSRV
Ga0137363_1161292913300012202Vadose Zone SoilMMLKRVLVPITVLFLSLAANAAAQSMVPDSAPAIGPAKPELFSRIIANQKKGDAALDLYERIERVESRKNPGDPAPASVKIAR
Ga0137399_1016376613300012203Vadose Zone SoilMMLKRVLVPITVLFLSLAANAAAQSMVPDSAPAIGPAKPELFSRIIANQKKGDAALDLYERIERVESRKNPGDPAPASVKIARVIPSGTGMF
Ga0137399_1016468113300012203Vadose Zone SoilMMLKRALVPITVLCLALAADAAGQSMVPDSAPAIGPAKPELFSRIIANQKKGDAALDLYERIERVESRKNPGDPAPASVKIARVIPSGTGMF
Ga0137399_1054099413300012203Vadose Zone SoilMLKRAFVSIALLSLAHNAAQSVVPDSTPATSSAKPEFFNRIIANQKKGEAALDLYERIERVETRK
Ga0137362_1043007023300012205Vadose Zone SoilMMLKRAFVPITVLCLALAADAAAQSVVPDSAPAIGPAKPELFSRIIANQKKGDAALDLY
Ga0137362_1055196613300012205Vadose Zone SoilMLKRAFISVAVLCLALTAGAAAQSVVPDSTPAIGPAKADFFNRVIANQKKAEAALDLYERIEHVETRKNPSDPAPPAIKI
Ga0137362_1122489723300012205Vadose Zone SoilMMLKRALVPITVLCLALAADAAGQSMVPDSAPAIGPAKPELFSRIIANQKKGDAALDLYERIERVESRKNPGDPAPASVKIARVI
Ga0137379_1064040023300012209Vadose Zone SoilMLKRAFVSIALLSLAHAPGQSVAPESTPGVGPEKPEFFNRVIAHQKKGEAALDLYERIERVETRKNPSDPAPPTIKIMRVIP
Ga0137370_1010738333300012285Vadose Zone SoilMLKRVFVSIALLSLAHAPGQSVVPESTPGVGPEKPEFFNRVIANQKKGEAALDLYERIERVETRKN
Ga0137360_1126762913300012361Vadose Zone SoilMMLKRALVPITVLCLALAADAAAQSMVPDSAPTIGPAKPELFSRIIANQKKGDAALDLYERIERVESRKNP
Ga0137360_1135516813300012361Vadose Zone SoilMMLKRVLVPITVLSLSLAADAAAQSMAPDSAPAIGPAKPELFSRLIANQKKGDAALDLYERIERVESRKNPGDPAPASVKIA
Ga0137390_1057713613300012363Vadose Zone SoilMMLKRAFVSLALLSLALGADAGAQSVTPDTRPTIGPAKPDFFNRVIANQKKGEAALDLYERIERVETRKHPNDAAPVAIKISRV
Ga0137358_1041353123300012582Vadose Zone SoilMMLKRAFVPITVLCLALAADAAAQSVVPDSAPAIGPAKPELFSRIIANQKKGDAALDLYERIERVESRKNPGDPAPASVKIARVIPSGTGMF
Ga0137398_1107035823300012683Vadose Zone SoilMMLKRVLVPITVLSLSLAADAAAQSMVPDSAPAIGPAKPELFSRIIANQKKGDAALDLYERIERVESR
Ga0137398_1107036023300012683Vadose Zone SoilMMLKRALVPITVLCLALAADAAGQSMVPDSAPAIGPAKPELFSRIIANQKKGDAALDLYERIERVESR
Ga0137396_1035615623300012918Vadose Zone SoilMLKRAFVSIALLSLAHNAAQSVVPDSTPATSSAKPEFFNRIIANQKKGEAALDLYERIERVETRKNPSDPAPTAIKIM
Ga0137396_1097691323300012918Vadose Zone SoilMMLKRAFVSLALLSLALAADAGAQSVKPDTRPTIGPAKPDFFNRVITNQKKGEAALDLYERVERVETRKNPSDP
Ga0137413_1039695523300012924Vadose Zone SoilMMLKRVLVPITVLSLSLAADAAAQSMVPDSAPAIGPAKPELFSRIIANQKKGDAALDLYERIERVESRKNPG
Ga0137413_1065319413300012924Vadose Zone SoilMMLKRAFVPITVLCLALAADAAAQSVVPDSAPAIGPAKPELFSRIIANQKKGDAALDLYERIERVESRKNPG
Ga0137404_1033386023300012929Vadose Zone SoilMALLSLALAADAAAQSAVPDTTPAIGPSRPDLFKRIIANQKKDESAMDLYERVERVETRKNSSDPNPPVVKVSRVIPSGTGMYKIAVGDDG
Ga0137407_1030225313300012930Vadose Zone SoilMRKRAFIPMALLSLALAADASAQSAVPDTTPAIGPSRPDLFKRIIANQKKDEAAVDLYERVERVETRKNSSDPNPPVVKVSRVIP
Ga0134077_1008146313300012972Grasslands SoilMRKYAFVPMALLSLAFAGDAAAQSAVPDTTPTIGPAKPDLFKRIIANQKKGEAALDLYERIERVETRKNPNDPKPSTVKI
Ga0137420_135699733300015054Vadose Zone SoilMALLLLVLAADAATQSAAPDSSLKIGPAKPDFFNRVIANQKKGEAALDVYERIERVETRKSPSDPAPRR*
Ga0137418_1062678613300015241Vadose Zone SoilMLNRTFIPLALLSLAFAADAAAQSAVPDTTPTIGPTKPDLFKRIIANQKKGEAALDLYERIERVETRKNPNDPTPSAVKISRVIP
Ga0137403_1020572813300015264Vadose Zone SoilMCKRAFILMALLSLALAADAAAQSAVPDTTPAIGPSRPDLFKRIIANQKKDESAMDLYERVERVETRKNSSDPNPPVVKV
Ga0137403_1117219823300015264Vadose Zone SoilMLNRTFIPLALLSLAFAADAAAQSAAPDPTPTVGPTKPDLFKRIIANQKKGEAALDLYERIERVETRKNPNDPAPSTVK
Ga0066669_1021519513300018482Grasslands SoilMLKRVFVSIALLSLAHAPGQSVVPESTPGVGPEKPEFFNRVIANQKKGEAALDLYERIERVETRKNP
Ga0193731_1000018153300020001SoilMLKGAFISVALLSLALVADSAAQSIVPDSTPAIGPARPDFFNRVVANQKKGEAALDLYERVERVETRKNPSDPAPRR
Ga0210407_1090847113300020579SoilMALLSLAFAAEAAAQSAVPDTAPTIGPAKPDLFKRIIANQKKGEAALDLYERIERVETRKNPNDPTPSAVKTSRVIPSGTGMVRIA
Ga0210408_1040055923300021178SoilMLKRAFVPIAVLSSAFAAVAAAQSIAPDSTPTIGPARPDLFLHVIANQKRGEAALDLY
Ga0210409_1000919113300021559SoilMNLIRVAAGTFQPLYIMLKRAFVPIAVLSSAFAAVAAAQSIAPDSTPTIGPARPDLFAHVIANQKRGEAALDLYERVERVESRKTPGDPAPTAIKISRVI
Ga0209239_112652333300026310Grasslands SoilMLKRVFVSIALLSLAHAPGQSVAPESTPGVGPEKPEFFNRVIANQKKGEAALDLYERIERVETRKNPNDPAPLAIKIMRVIPS
Ga0209268_118246823300026314SoilMLKRAFVSIALLCLAHAPGQSVVPESTPGVGPEKPEFFNRVIANQKKGEAALDLYERIERVETRKNPSDAAPPAIKIMRVIPSGTGMF
Ga0209152_1039506313300026325SoilMLKRTFPIALLSLALAADAAAQSAVPDSRPTIGPTKPDFFNRVIANQKKGEAALDLYERIERVETRK
Ga0209801_1001312153300026326SoilMALLSLAFAGDAAAQSAVPDTTPTIGPAKPDLFKRIIANQKKGEAALDLYERIERVETRRNPNDPAPSAVRISRVIPSGT
Ga0209804_105000113300026335SoilMHKYAFVAMALLSLAFAADAAAQSAVSDTTPSIGPAKPELFKRIIANQKKGEAALDLYERIERVETRKNPNDPAPSAVKISRVIPSGTGMVR
Ga0257157_107253913300026496SoilMLHRAFIILALLSPALTSGAGAQSVVSDSGAAIGPAKPELFHRVIANQKKGEAALEVYERVERVETRKSPSDPSPPAIKITRVIPSGTGMVKIPLGPDG
Ga0209808_125757013300026523SoilMLNRTFIPLALLSLAFAADAAAQSAVPDTTPTIGPARPELFKRIIANQKKGEAALDLYERIERVET
Ga0209157_122616623300026537SoilMLKRAFVPITVLSLALAANAAAQSMVPDSAPAIGPAKSELFNRIIANQKKGEAALDVYERIERVESRKNPGDPAP
Ga0209805_125433713300026542SoilMRKYAFVPMALLSLAFAGDAAAQSAVPDTTPTIGPAKPDLFKRIIANQKKGEAALDLYERIERVETRKNPNDPKPSTVK
Ga0209161_1034057213300026548SoilMMLKRVLVPITVLSMALAANAAAQSMVPDSATAIGPAKSDLFNRIIANQKRGDAALDLYERIERVESRKNPGDPAPASVKIARVIPSGTGMFRIPMGDDG
Ga0209648_1003778813300026551Grasslands SoilMMLKRAFVPIALLSLALAADAGAQSVTPDTRPTIGPAKPDFFNRVIANQKKGEAALDLYERIERVETRK
Ga0209648_1004973043300026551Grasslands SoilMMLKLAFVSLALLSLALAADAGAQSVTSDTRPTIGPAKPDFFNRVIANQKKGEAALDLYERIERVETRK
Ga0209648_1010953613300026551Grasslands SoilMALLSLALAVYAAAQSAAPDTTPTIGPPKPDLFKRIIANQKKDEAAMDLYERVERVETRKNSSDPNPPVVKISRVIPSGTGMYKIAVGEDGKP
Ga0209648_1014099833300026551Grasslands SoilMMLKRAFVPITVLYLALAANAAAQSMVPDSATAIGLAKPELFSRIIANQKKGDAALDLYERIERVESRKN
Ga0209648_1036194013300026551Grasslands SoilMMLKRAFVPITVLSLALAANAAAQSMVPDSAPAIGPAKPELFSRIIANQKKGAAALDLYERIERVESRKNPSDPAPASVK
Ga0209117_107841623300027645Forest SoilMALLSLALAADGAAQSVAPDSSLKIGPAKPDFFNRVIANQKKGEAALELYERIERVETRKSPSDPAPAAIKISRVIPSGTG
Ga0209180_1043606223300027846Vadose Zone SoilMLHRTFIPVAVLSLALAGDAAAQSVAPDTTPAIEPAKPDLFHRVIANQKKGEAALDLYERIERVETRKNSSDPAPPAIKISRVIPSG
Ga0209701_1014679913300027862Vadose Zone SoilMLKRAFVSLALLSLALAADAGAQSVTPDTRPTIGPAKPDFFNRVITNQKKGEAALDLYERIERVETRKHPND
Ga0209701_1020226823300027862Vadose Zone SoilMMLKRAFVPITVLSLALAANAAAQSVVPDSAPAIGSAKPELFSRIIANQKKGDAALDLYERIERVES
Ga0209701_1043341423300027862Vadose Zone SoilMALLSLALAVDATGQSMVPDSAPAINPAKPELFNHIIANQKKGESALDLYERIERVETRKNPSDPVPA
Ga0209701_1061877523300027862Vadose Zone SoilMALLSLALAADAAAQSAIPDTTPSIGPSKPDLFKRIIANQKKDADAMDFYERLERVETRKNLSDPNPPAVKVSR
Ga0209283_1004363413300027875Vadose Zone SoilMAMLSLALAADAAAQSVAPDTTPAIEPAKPDLFHRVIANQKKGEAALDLYERIERVETRKNPSEPAPAAIKISRVI
Ga0209283_1030017813300027875Vadose Zone SoilMMLKRVLVPITVLSLALAANAAAQSMVPDSAPAIGPPKPELFSRIIANQKKGDAALDLYERIERVESRKNPGDPAPASVKIARV
Ga0222749_1055455923300029636SoilMVHRAFIVLALLSLALTADAAPQSVVSDSTPAIGPGKPELFTRVIANQKKAEAAMEVYERIERVETRKSP
Ga0170823_1329473423300031128Forest SoilMIHRAFIILALLSPALTSDASAQSVVSDSGAAIGPAKPELFTRVIANQKRAEAALELYERVERVETRKSPSDPSPPAIKITRVIPSGTGMVKIPVGPDGTPGDS
Ga0170824_10923199123300031231Forest SoilMIHRAFIILALLSPALTSDAGAQSVVSDSGAAIGPAKPELFTRVIANQKRAEAALELYERVERVETRKSPSDPSPPAIKITRVIPSGTGMV
Ga0170818_10540059223300031474Forest SoilMIHRAFIILALLSPALTSDAGAQSVVSDSGAAIGPAKPELFTRVIANQKRAEAALELYERVERVETRKSPSDPSPPAIKITR
Ga0307475_1132920623300031754Hardwood Forest SoilMMLKRAFVPITVLSLALAANAAAQSMVPDSATAIGPAKPELFSRIIANQKKGDAALDLYERIERVESRKNPGDPAPVSVKI
Ga0307479_1043770913300031962Hardwood Forest SoilMLKRTFVPIAVLSSAFAAVAAAQSIAPDSTPTIGPARPDLFLHVIANQKRGEAALDLYERIERVESRKTPSDPAPAAV
Ga0307471_10002457253300032180Hardwood Forest SoilMRKRIFIPMALLSLAFATDAVAQSVVPDTTPTIGPSRPDLFKRIIANQKKDEAAMDLY


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.