NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F102755

Metagenome / Metatranscriptome Family F102755

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102755
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 79 residues
Representative Sequence MPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVPAD
Number of Associated Samples 74
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 25.74 %
% of genes near scaffold ends (potentially truncated) 32.67 %
% of genes from short scaffolds (< 2000 bps) 92.08 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (54.455 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.861 % of family members)
Environment Ontology (ENVO) Unclassified
(29.703 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.376 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 28.57%    Coil/Unstructured: 71.43%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF07883Cupin_2 11.88
PF14572Pribosyl_synth 10.89
PF13396PLDc_N 1.98
PF07228SpoIIE 1.98
PF13306LRR_5 0.99
PF12697Abhydrolase_6 0.99
PF07452CHRD 0.99
PF13466STAS_2 0.99
PF01386Ribosomal_L25p 0.99
PF01957NfeD 0.99
PF00753Lactamase_B 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1825Ribosomal protein L25 (general stress protein Ctc)Translation, ribosomal structure and biogenesis [J] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A54.46 %
All OrganismsrootAll Organisms45.54 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c1082068Not Available669Open in IMG/M
3300000891|JGI10214J12806_11136859All Organisms → cellular organisms → Bacteria → Terrabacteria group535Open in IMG/M
3300000891|JGI10214J12806_13864463All Organisms → cellular organisms → Bacteria → Terrabacteria group537Open in IMG/M
3300004114|Ga0062593_100001313All Organisms → cellular organisms → Bacteria8284Open in IMG/M
3300004114|Ga0062593_100096570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2065Open in IMG/M
3300004114|Ga0062593_100602058All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1048Open in IMG/M
3300004114|Ga0062593_100726428Not Available974Open in IMG/M
3300004157|Ga0062590_101606721Not Available658Open in IMG/M
3300004157|Ga0062590_102124763Not Available586Open in IMG/M
3300004463|Ga0063356_100623478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1464Open in IMG/M
3300004463|Ga0063356_101502921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria997Open in IMG/M
3300004463|Ga0063356_103641239Not Available664Open in IMG/M
3300004463|Ga0063356_106293087Not Available509Open in IMG/M
3300004479|Ga0062595_100100740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1535Open in IMG/M
3300004480|Ga0062592_102194697All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300004643|Ga0062591_101387911Not Available696Open in IMG/M
3300004801|Ga0058860_11902153All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300005290|Ga0065712_10344432All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300005328|Ga0070676_11218485Not Available572Open in IMG/M
3300005330|Ga0070690_100387614All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300005345|Ga0070692_10494216All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium792Open in IMG/M
3300005354|Ga0070675_100246513All Organisms → cellular organisms → Bacteria1562Open in IMG/M
3300005365|Ga0070688_100295097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1170Open in IMG/M
3300005365|Ga0070688_100808729Not Available734Open in IMG/M
3300005365|Ga0070688_100812049Not Available732Open in IMG/M
3300005366|Ga0070659_100845204Not Available798Open in IMG/M
3300005440|Ga0070705_101100701All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300005441|Ga0070700_101610175Not Available555Open in IMG/M
3300005455|Ga0070663_101596110Not Available582Open in IMG/M
3300005456|Ga0070678_100989746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium772Open in IMG/M
3300005577|Ga0068857_100895665Not Available851Open in IMG/M
3300005616|Ga0068852_101116211All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300006049|Ga0075417_10526329All Organisms → cellular organisms → Bacteria → Terrabacteria group596Open in IMG/M
3300006051|Ga0075364_11044265Not Available555Open in IMG/M
3300006845|Ga0075421_102461592Not Available543Open in IMG/M
3300006854|Ga0075425_100222290Not Available2172Open in IMG/M
3300006903|Ga0075426_11408762Not Available529Open in IMG/M
3300007076|Ga0075435_100290530Not Available1397Open in IMG/M
3300009098|Ga0105245_11950541Not Available640Open in IMG/M
3300009100|Ga0075418_12974784Not Available517Open in IMG/M
3300009147|Ga0114129_10861948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1151Open in IMG/M
3300009148|Ga0105243_12980318Not Available513Open in IMG/M
3300009156|Ga0111538_10105972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3571Open in IMG/M
3300009553|Ga0105249_12933559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300012891|Ga0157305_10206767Not Available567Open in IMG/M
3300012897|Ga0157285_10203999All Organisms → cellular organisms → Bacteria → Terrabacteria group623Open in IMG/M
3300012905|Ga0157296_10015658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1399Open in IMG/M
3300012908|Ga0157286_10094331All Organisms → cellular organisms → Bacteria → Terrabacteria group866Open in IMG/M
3300012910|Ga0157308_10122362Not Available796Open in IMG/M
3300012951|Ga0164300_10623104Not Available640Open in IMG/M
3300012958|Ga0164299_10145284All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300013296|Ga0157374_10201869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1947Open in IMG/M
3300013297|Ga0157378_11106193All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300013306|Ga0163162_11813780Not Available697Open in IMG/M
3300013306|Ga0163162_11831797Not Available694Open in IMG/M
3300014326|Ga0157380_11432350Not Available742Open in IMG/M
3300014968|Ga0157379_12121445All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300015077|Ga0173483_10765370Not Available553Open in IMG/M
3300015200|Ga0173480_10378533Not Available815Open in IMG/M
3300015200|Ga0173480_10413463All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300015200|Ga0173480_10671644Not Available646Open in IMG/M
3300015371|Ga0132258_10159227Not Available5424Open in IMG/M
3300015371|Ga0132258_10964815Not Available2154Open in IMG/M
3300015371|Ga0132258_11357776All Organisms → cellular organisms → Bacteria1796Open in IMG/M
3300015371|Ga0132258_11357876Not Available1796Open in IMG/M
3300015371|Ga0132258_13225445Not Available1125Open in IMG/M
3300015371|Ga0132258_13398264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1093Open in IMG/M
3300015372|Ga0132256_100061203All Organisms → cellular organisms → Bacteria3534Open in IMG/M
3300015372|Ga0132256_102786714Not Available587Open in IMG/M
3300015372|Ga0132256_103664564Not Available517Open in IMG/M
3300015374|Ga0132255_102315360Not Available820Open in IMG/M
3300017792|Ga0163161_11404030Not Available610Open in IMG/M
3300017792|Ga0163161_11453825Not Available600Open in IMG/M
3300019356|Ga0173481_10013588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2354Open in IMG/M
3300019362|Ga0173479_10121354Not Available1003Open in IMG/M
3300019362|Ga0173479_10192231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium854Open in IMG/M
3300022915|Ga0247790_10062632Not Available872Open in IMG/M
3300024055|Ga0247794_10019327All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300025315|Ga0207697_10505427Not Available534Open in IMG/M
3300025899|Ga0207642_10212825All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300025918|Ga0207662_10792957Not Available667Open in IMG/M
3300025926|Ga0207659_10433743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1104Open in IMG/M
3300025927|Ga0207687_10635216All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300025933|Ga0207706_10220781All Organisms → cellular organisms → Bacteria1659Open in IMG/M
3300025935|Ga0207709_10705430Not Available808Open in IMG/M
3300025937|Ga0207669_10521542Not Available954Open in IMG/M
3300025937|Ga0207669_10848117Not Available760Open in IMG/M
3300025972|Ga0207668_11097967All Organisms → cellular organisms → Bacteria → Terrabacteria group713Open in IMG/M
3300025981|Ga0207640_12074630All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300026075|Ga0207708_10239380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1459Open in IMG/M
3300026075|Ga0207708_10551220Not Available972Open in IMG/M
3300031547|Ga0310887_10420454Not Available791Open in IMG/M
3300031847|Ga0310907_10052310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1590Open in IMG/M
3300031854|Ga0310904_10810224Not Available656Open in IMG/M
3300031854|Ga0310904_10825747Not Available650Open in IMG/M
3300031944|Ga0310884_10634194All Organisms → cellular organisms → Bacteria → Terrabacteria group641Open in IMG/M
3300032000|Ga0310903_10085664All Organisms → cellular organisms → Bacteria → Terrabacteria group1308Open in IMG/M
3300032012|Ga0310902_11264386Not Available521Open in IMG/M
3300032075|Ga0310890_10683922Not Available802Open in IMG/M
3300032075|Ga0310890_10923333Not Available698Open in IMG/M
3300032075|Ga0310890_11484754Not Available558Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil8.91%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere6.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.95%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.95%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.97%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.98%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.99%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004801Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300022915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_108206812228664021SoilMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVRAGD
JGI10214J12806_1113685923300000891SoilVRFPDGTREFRYPERPVEVGDAIWHDNVRYHVISVTEDAAGDQLTVRVEPDAESIGDLLGSEEGALVLVPAGD*
JGI10214J12806_1386446323300000891SoilVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVVSVTEDATGDQLTVAVEPDAESIADLLGSEEGALVLVPTGDEPVGPRSRYHRR*
Ga0062593_10000131393300004114SoilMPALIVRLPDGTREFRYLDRPLEVGDAIWHDNVRYHVVSVSQNGDGEQLTVTVEPDAETIGDLLSSEEGALVLVPAD*
Ga0062593_10009657023300004114SoilVPALIVRFPDGSREFRYPERPLEVGDAIWHDNVRYHVVSLSENGEGEQITVTVEPDPESIIDLLSSEEGALVLVPAG*
Ga0062593_10060205833300004114SoilMPALIVRFPDGSREFRYPDRPVEVGDHIWHDNVRYHVVSASEDGDGEQLTVTVEPDAESIGDLLGSEEGALVLVRAG*
Ga0062593_10072642823300004114SoilVSAFVVRFPDGSREFLYPERPLEVGDAVWHDGTRYHVIHVTEDAGRDVLTVTVEPEADSLGHMLGSEEGALVLSPVVD*
Ga0062590_10160672113300004157SoilMPALIVRFPDGTREFRYLDRPLEVGDAIWHDNVRYHVVSVSQNGDGEQLTVTVEPDAETIGDLLSSEEGALVLVPAD*
Ga0062590_10212476313300004157SoilMLEPAISCCFVPALIVRFPDGSREFRYPDRPLEVGDHLWHDNVRYHVVSVTEDAEGDQLTVTVEPDAESLGDLLGSEQGALVLV
Ga0063356_10062347833300004463Arabidopsis Thaliana RhizosphereVPAFVVRFPDGSKEFRYPEQPLEVGAAIWHDGERYRVVHVQEREGGDLLTVTVEPDPESIGDLLSSEEGALVLVPAT*
Ga0063356_10150292123300004463Arabidopsis Thaliana RhizospherePVSCAPVPALIVRFPDGSREFRYPERPLEVGDAIWHDNVRYHVVSLSENGEGEQITVTVEPDPESIIDLLSSEEGALVLVPAG*
Ga0063356_10364123913300004463Arabidopsis Thaliana RhizosphereLTPPIGCEPMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVVSVTEDAAGDQLTVAVEPDAESIGDLLGSEEGALVLVPTGD*
Ga0063356_10629308713300004463Arabidopsis Thaliana RhizosphereMLEPAISCCFVPALIVRFPDGSREFRYPDRPLEVGDHLWHDNVRYHVVSVTEDAEGDQLTVTVEPDAESLGDLLGSEQGALVLVPAD*
Ga0062595_10010074013300004479SoilMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVRVEPDAESIGDLLGSEEGALVLVPAGD*
Ga0062592_10219469723300004480SoilLIVRFPDGTREFRYPERPLDVGDGIWHGSVRYHVISVSEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAA*
Ga0062591_10138791113300004643SoilVVRFPDGSREFLYPERPLEVGDAVWHDGTRYHVIHVTEDAGRDVLTVTVEPEADSLGHMLGSEEGALVLSPVVD*
Ga0058860_1190215313300004801Host-AssociatedMPALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD*
Ga0065712_1034443223300005290Miscanthus RhizosphereDGTREFRYPERPLDVGDGIWHGSVRYHVISVSEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD*
Ga0070676_1121848523300005328Miscanthus RhizosphereVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLAPAD*
Ga0070690_10038761433300005330Switchgrass RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHGSVRYHVISVSEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD*
Ga0070692_1049421633300005345Corn, Switchgrass And Miscanthus RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHGSVRYHVISVSEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPA
Ga0070675_10024651313300005354Miscanthus RhizosphereVQITSAPVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLVPAD*
Ga0070688_10029509733300005365Switchgrass RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHGSVRYHVISVSEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVP
Ga0070688_10080872933300005365Switchgrass RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVP
Ga0070688_10081204923300005365Switchgrass RhizosphereVRSPEPGVDQRLPRLKRSPPTRRVQITSASVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLVPAD*
Ga0070659_10084520423300005366Corn RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAA*
Ga0070705_10110070123300005440Corn, Switchgrass And Miscanthus RhizosphereFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD*
Ga0070700_10161017513300005441Corn, Switchgrass And Miscanthus RhizosphereVQITSASVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLVPAD*
Ga0070663_10159611013300005455Corn RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPA
Ga0070678_10098974633300005456Miscanthus RhizosphereVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLAPA
Ga0068857_10089566523300005577Corn RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVPAGD*
Ga0068852_10111621123300005616Corn RhizosphereYAANQMPALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD*
Ga0075417_1052632923300006049Populus RhizospherePGRLTPPIGCEPMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVRVEPDAESIGDLLGSEEGALVLVPAGD*
Ga0075364_1104426513300006051Populus EndosphereSRLGRHVRTPAAATRLTQSVTCVSVPALIVRFPDGSREFRYPDRPIEVGDAIWHDNVRYHVVSVSEDDGGEQLTVIVEPEPENIRDLLGSEKGALVLVPAT*
Ga0075421_10246159213300006845Populus RhizosphereVRTPAAATRLTQSVTCVSVPALIVRFPDGSREFRYPDRPIEVGDAIWHDNVRYHVVSVSEDDGGEQLTVIVEPEPENIRDLLGSEKGALVLVPAT*
Ga0075425_10022229043300006854Populus RhizosphereMPALIVRFPDGTREFRYPERPLKDGDAIWHEGRRYHVVSIVDDAGGGQVSAIVEPDAESIGDLLNSEEGALVLVPAD*
Ga0075426_1140876233300006903Populus RhizosphereMPALIVRFPDGTREFRYPERPLKEGDAIWHEGRRYHVVSIVDDAGGGQVSAIVEPDAESIGDLLNSEEGALVLVPAD*
Ga0075435_10029053043300007076Populus RhizosphereMPALIVRFPDGTREFRYPERPLKEGDAIWHEGRRYHVVSIVDDAGGGQVSAIVEPDAESIGDLLSSEEGALVLVPAD*
Ga0105245_1195054113300009098Miscanthus RhizosphereMPALIVRLPDGTREFRYPDRPLEVGDAIWHDNVRYHVVSVSQNGDGEQLTVTVEPDAETIGDLLSSEEGALVLVPAD*
Ga0075418_1297478413300009100Populus RhizosphereVPALIVRFPDGSREFRCPDRPIEVGDAIWHDNVRYHVVSVSEDDGGEQLTVIVEPEPENIRDLLGSEKGALVLVPAT*
Ga0114129_1086194843300009147Populus RhizosphereMPALIVRFPDGTREFRYPERPLEVGEAIWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVPAGD*
Ga0105243_1298031823300009148Miscanthus RhizosphereMPALIVRFPDGSREFRYPDRPVEVGDHIWHDNVRYHVVSASKDGDGEQLTVTVEPDAESIGDLLGSEEGALVLVPAG*
Ga0111538_1010597253300009156Populus RhizosphereMPALIVRFPDGTREFRYPERPVEVGDAIWHDNVRYHVISVTEDAAGDQLTVRVEPDAESIGDLLGSEEGALVLVPAGD*
Ga0105249_1293355923300009553Switchgrass RhizosphereCVPMPALIVRFPDGSREFRYPDRPVEVGDHIWHDNVVYHVVSASEDGDGEQLTVTVEPDAKSIGDLLGSEEGALVLVPAG*
Ga0157305_1020676723300012891SoilMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVAVEPDAESIGDLLGSEEGALVLVPTGD*
Ga0157285_1020399913300012897SoilMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVVSVTEDAAGDQLTVAVEPDAESIGDLLGSEEGALVLVPTGD*
Ga0157296_1001565813300012905SoilMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVAVEPDAESIGDLLGSEEGALVLVPAGD*
Ga0157286_1009433123300012908SoilMPALIVRFPDGTREFRYPERPLDLGDGIWHGSVRYHVISVSEDAERDQLTVTVEPDVESIGDLLGSEEGALVLVPTGD*
Ga0157308_1012236213300012910SoilAGRLTPQIGCEPMPALIVRLPDGTREFRYLDRPLEVGDAIWHDNVRYHVVSASKDGDGEQLTVTVEPDAETIGDLLSSEEGALVLVPAD*
Ga0164300_1062310433300012951SoilMPALIVRFPDGTREFRYPEHALKEGDAIWHEGRRYHVVSVSEYAAGGQLNVMVEPDAESIGDLLGSEEGALVLVPAE*
Ga0164299_1014528413300012958SoilMPALIVRFPDGTREFRYPEHPLKEGDAIWHEGRRFHVVSVSEDAAGGQLNVMVEPDAESIGDLLGSEEGALVLVPAE*
Ga0157374_1020186933300013296Miscanthus RhizosphereMPALIVRFPDGTREFRCPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD*
Ga0157378_1110619323300013297Miscanthus RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHAISVTEDAEGDQLTVTVEPDVASIGDLLGSEEGALVLVPAD*
Ga0163162_1181378033300013306Switchgrass RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHGSVRYHVISVSEDAEGDQLTVTVEPDVESIGDL
Ga0163162_1183179713300013306Switchgrass RhizosphereTPQIGCEPMPALIVRFPDGTREFRYLDRPLEVGDAIWHDNVRYHVVSVSQNGDGEQLTVTVEPDAETIGDLLSSEEGALVLVPAD*
Ga0157380_1143235013300014326Switchgrass RhizosphereVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLVPAD*
Ga0157379_1212144523300014968Switchgrass RhizosphereMPALTVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD*
Ga0173483_1076537013300015077SoilMTALIVRFPDGSREFRYPDRRLEVGDAIFHEGTRYRVVSTTENDAGEQEAVTVEVEPESLGDLLGSEHGALVLAPAGD*
Ga0173480_1037853313300015200SoilMPALIVRFPDGTREFRYPERPVEVGDAIWHDNVRYHVVSVTEDAAGDQLTVAVEPDAESIGDLLGSEEGALVLVPAGD*
Ga0173480_1041346313300015200SoilPALIVRFPDGTREFRYPERPLDVGDGIWHGSVRYHVISVSEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAA*
Ga0173480_1067164413300015200SoilMPALIVRFPDGTKEFRYPGRPLAVGDAIWHDGTRFHVVSVEDADGEQLAVTVEPDPASIGDLLKSEEGALVLVPVDLVG*
Ga0132258_1015922783300015371Arabidopsis RhizosphereMPALIVRFPDGTREFRYPEHPLKEGDAIWHEGRRYHVVSVSEDAAGGQLNVMVEPDAESIGDLLGSEEGALVLVPAD*
Ga0132258_1096481543300015371Arabidopsis RhizosphereVPALVVRFPDGSKEFRYPERPLEIGDAIWHENTRHHVIATDEDDEGRQVAVTVEPDPQGIADMLGSEEGALVLTLAD*
Ga0132258_1135777643300015371Arabidopsis RhizosphereMPALIVRFPDGTREFRYPEHPLKEGDAIWHEGRRYHVVSVSEDAAGGQLNVMVEPDAESIGDLLGSEEGALVLVPAE*
Ga0132258_1135787633300015371Arabidopsis RhizosphereVPALIVRFPDGSREFRYPDRPVDLGGAIWHDSVRYHVVSVTEDEGGEQLTVTVEPDPESIGDLLGSEEGALVLVPAT*
Ga0132258_1322544523300015371Arabidopsis RhizosphereMPALIVRFPDGTREFRYPDRPLEVGDAIWHDNVRYHVISVTEDHEGDQLTVTVEPDPESIGDLLSSEEGALVLVPAT*
Ga0132258_1339826433300015371Arabidopsis RhizosphereMPALIVRFPDGTREFRYPERPLVEGDTLWHDNVRYHVVSVSEDAGGDQVNVTVEPDAQSIGDLLRSEEGALVLVPAE*
Ga0132256_10006120343300015372Arabidopsis RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVASIGDLLGSEEGALVLVPAD*
Ga0132256_10278671413300015372Arabidopsis RhizosphereVPALIVRFPDGSREFRYPDRPVDVGEAIWHDNVRYHVVSVTEDGGGEQLTVTVEPDPESIGDLLGSEEGALVLVPAT*
Ga0132256_10366456423300015372Arabidopsis RhizosphereMPALIVRFPDGTREFRYPERPLVEGDTLWHDNVRYHVVSVSEDAGGDQVNVTVEPDAQSIGDLLRSEEG
Ga0132255_10231536013300015374Arabidopsis RhizosphereVPALIVRFPDGSREFRYPDRPVDVGEAIWPDNVRYHVVSVTEDEGGEQLTVTVEPDPESIGDLLGSEEGALVLVPAT*
Ga0163161_1140403013300017792Switchgrass RhizosphereMPALIVRFPDGTREFRYLDRPLEVGDAIWHDNVRYHVVSVSQNGDGEQLTVTVEPDAETIGDLLSSEEGALVLVPAD
Ga0163161_1145382523300017792Switchgrass RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHGSVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD
Ga0173481_1001358833300019356SoilMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVVSVTEDAAGDQLTVAVEPDAESIGDLLGSEEGALVLVPTGD
Ga0173479_1012135413300019362SoilVSAFVVRFPDGSREFLYPERPLEVGDAVWHDGTRYHVIHVTEDAGRDVLTVTVEPEADSLGHMLGSEEGALVLSPVVD
Ga0173479_1019223123300019362SoilTPQIGCEPMPALIVRFPDGTREFRYLDRPLEVGDAIWHDNVRYHVVSVSQNGDGEQLTVTVEPDAETIGDLLSSEEGALVLVPAD
Ga0247790_1006263213300022915SoilMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVHYHVISVTEDAAGDQLTVRVEPDAESIGDLLGSEEGALVLVPAGD
Ga0247794_1001932723300024055SoilMPALIVRFPDGTREFRYPERPLDVGDGIWHGSVRYHVISVSEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD
Ga0207697_1050542713300025315Corn, Switchgrass And Miscanthus RhizosphereMPALIVRLPDGTREFRYLDRPLEVGDAIWHDNVRYHVVSVSQNGDGEQLTVTVEPDAETIGDLLSSEEGALVLVPAD
Ga0207642_1021282523300025899Miscanthus RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD
Ga0207662_1079295713300025918Switchgrass RhizosphereGRLTPQIGCEPMPALIVRFPDGTREFRYLDRPLEVGDAIWHDNVRYHVVSVSQNGDGEQLTVTVEPDAETIGDLLSSEEGALVLVPAD
Ga0207659_1043374313300025926Miscanthus RhizosphereVQITSAPVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLVPAD
Ga0207687_1063521623300025927Miscanthus RhizosphereMPALIVRFPDGTREFRYPERPLDVGDGICDDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD
Ga0207706_1022078133300025933Corn RhizosphereMPALIVRFPDGTREFRYPERPVEVGDAIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD
Ga0207709_1070543023300025935Miscanthus RhizosphereVQITSASVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLAPAD
Ga0207669_1052154223300025937Miscanthus RhizosphereMPALIVRFPDGTREFRYPDDPLQLGDAIWHDGTRYHVVSVSENDDGDQVTVTVEPVPEGIGDMLSSEHGALVLASAD
Ga0207669_1084811723300025937Miscanthus RhizospherePPTRRVQITSAPVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLVPAD
Ga0207668_1109796723300025972Switchgrass RhizosphereGTREFRYPERPLEVWDAILHDNVRYHVISVTEDAAGDQLTVRVEPDAESIGDLLGSEEGALVLVPAGD
Ga0207640_1207463013300025981Corn RhizosphereALIVRFPDGTREFRYPERPLDVGDGIWHDNVRYHVISVTEDAEGDQLTVTVEPDVESIGDLLGSEEGALVLVPAD
Ga0207708_1023938033300026075Corn, Switchgrass And Miscanthus RhizosphereVQITSASVPALIVRFPDGSREFRYPDHPLEVGDGIWHDNVRYHVVSVSANDGGDQLTVTVERDAEGIGELLGSEEGALVLVPAD
Ga0207708_1055122023300026075Corn, Switchgrass And Miscanthus RhizosphereVDRAHDRPGRRRAGRHLRASDAATRLTHSVTCLFVPALIVRFPDGSREFRYPDRPVEVGDAIWHDNVRYHVVSVTENDGGEQLTVTVEPDAESIGDLLGSEEGALVLVPSG
Ga0310887_1042045413300031547SoilMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVPAD
Ga0310907_1005231013300031847SoilPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVPAGD
Ga0310904_1081022413300031854SoilMLEPAISCCFVPALIVRFPDGSREFRYPDRPLEVGDHLWHDNVRYHVVSVTEDAEGDQLTVTVEPDAESLGDLLGSEEGALVLVPAD
Ga0310904_1082574723300031854SoilVPALIVRFPDGSREFRYPDRPVGVGDAIWHDNVRYHVVSVTEDDGGEQLTVTVEPDPESIGDLLSSEEGALVLVPAT
Ga0310884_1063419413300031944SoilRLTPPIGCEPMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVPAGD
Ga0310903_1008566423300032000SoilMPALIVRFPDGTREFRYPERPLGVGDAIWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVPAGD
Ga0310902_1126438613300032012SoilVRASAGWPGRLTAPIGCEPMPALIVRFPDGTREFRYPERPLEVGDAIWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVPAGD
Ga0310890_1068392213300032075SoilMLEPAISCCFVPALIVRFPDGSREFRYPDRPLEVGDHLWHDNVRYHVVSVTEDAEGDQLTVTVEPDAESLGDLL
Ga0310890_1092333313300032075SoilVPAFVVRFPDGSKEFRYPEEPIEVGAAIWHDGERYRVVHVQEHEGGDLLTVTVERDVESIGDLLGSEEGALVLVPAS
Ga0310890_1148475423300032075SoilMPALIVRFPDGTREFRYPERPLGVGDALWHDNVRYHVISVTEDAAGDQLTVTVEPDAESIGDLLGSEEGALVLVPAGD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.